Compare commits
34 Commits
yx-prolong
...
chb-rebase
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780f1c80d0
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@@ -7,6 +7,7 @@
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#include <string>
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#include <cmath>
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#include <new>
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#include <vector>
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using namespace std;
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#include "misc.h"
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@@ -17,6 +18,168 @@ using namespace std;
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#include "interp_lb_profile.h"
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#endif
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namespace
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{
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struct InterpBlockView
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{
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Block *bp;
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double llb[dim];
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double uub[dim];
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};
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struct BlockBinIndex
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{
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int bins[dim];
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double lo[dim];
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double inv[dim];
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vector<InterpBlockView> views;
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vector<vector<int>> bin_to_blocks;
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bool valid;
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BlockBinIndex() : valid(false)
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{
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for (int i = 0; i < dim; i++)
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{
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bins[i] = 1;
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lo[i] = 0.0;
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inv[i] = 0.0;
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}
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}
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};
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inline int clamp_int(int v, int lo, int hi)
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{
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return (v < lo) ? lo : ((v > hi) ? hi : v);
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}
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inline int coord_to_bin(double x, double lo, double inv, int nb)
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{
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if (nb <= 1 || inv <= 0.0)
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return 0;
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int b = int(floor((x - lo) * inv));
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return clamp_int(b, 0, nb - 1);
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}
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inline int bin_loc(const BlockBinIndex &index, int b0, int b1, int b2)
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{
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return b0 + index.bins[0] * (b1 + index.bins[1] * b2);
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}
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inline bool point_in_block_view(const InterpBlockView &view, const double *pox, const double *DH)
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{
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for (int i = 0; i < dim; i++)
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{
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if (pox[i] - view.llb[i] < -DH[i] / 2 || pox[i] - view.uub[i] > DH[i] / 2)
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return false;
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}
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return true;
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}
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void build_block_bin_index(Patch *patch, const double *DH, BlockBinIndex &index)
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{
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index = BlockBinIndex();
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MyList<Block> *Bp = patch->blb;
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while (Bp)
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{
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Block *BP = Bp->data;
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InterpBlockView view;
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view.bp = BP;
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for (int i = 0; i < dim; i++)
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{
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#ifdef Vertex
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#ifdef Cell
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#error Both Cell and Vertex are defined
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#endif
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view.llb[i] = (feq(BP->bbox[i], patch->bbox[i], DH[i] / 2)) ? BP->bbox[i] + patch->lli[i] * DH[i] : BP->bbox[i] + (ghost_width - 0.5) * DH[i];
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view.uub[i] = (feq(BP->bbox[dim + i], patch->bbox[dim + i], DH[i] / 2)) ? BP->bbox[dim + i] - patch->uui[i] * DH[i] : BP->bbox[dim + i] - (ghost_width - 0.5) * DH[i];
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#else
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#ifdef Cell
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view.llb[i] = (feq(BP->bbox[i], patch->bbox[i], DH[i] / 2)) ? BP->bbox[i] + patch->lli[i] * DH[i] : BP->bbox[i] + ghost_width * DH[i];
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view.uub[i] = (feq(BP->bbox[dim + i], patch->bbox[dim + i], DH[i] / 2)) ? BP->bbox[dim + i] - patch->uui[i] * DH[i] : BP->bbox[dim + i] - ghost_width * DH[i];
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#else
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#error Not define Vertex nor Cell
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#endif
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#endif
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}
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index.views.push_back(view);
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if (Bp == patch->ble)
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break;
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Bp = Bp->next;
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}
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const int nblocks = int(index.views.size());
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if (nblocks <= 0)
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return;
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int bins_1d = int(ceil(pow(double(nblocks), 1.0 / 3.0)));
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bins_1d = clamp_int(bins_1d, 1, 32);
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for (int i = 0; i < dim; i++)
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{
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index.bins[i] = bins_1d;
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index.lo[i] = patch->bbox[i] + patch->lli[i] * DH[i];
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const double hi = patch->bbox[dim + i] - patch->uui[i] * DH[i];
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if (hi > index.lo[i] && bins_1d > 1)
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index.inv[i] = bins_1d / (hi - index.lo[i]);
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else
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index.inv[i] = 0.0;
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}
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index.bin_to_blocks.resize(index.bins[0] * index.bins[1] * index.bins[2]);
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for (int bi = 0; bi < nblocks; bi++)
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{
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const InterpBlockView &view = index.views[bi];
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int bmin[dim], bmax[dim];
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for (int d = 0; d < dim; d++)
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{
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const double low = view.llb[d] - DH[d] / 2;
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const double up = view.uub[d] + DH[d] / 2;
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bmin[d] = coord_to_bin(low, index.lo[d], index.inv[d], index.bins[d]);
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bmax[d] = coord_to_bin(up, index.lo[d], index.inv[d], index.bins[d]);
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if (bmax[d] < bmin[d])
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{
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int t = bmin[d];
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bmin[d] = bmax[d];
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bmax[d] = t;
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}
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}
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for (int bz = bmin[2]; bz <= bmax[2]; bz++)
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for (int by = bmin[1]; by <= bmax[1]; by++)
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for (int bx = bmin[0]; bx <= bmax[0]; bx++)
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index.bin_to_blocks[bin_loc(index, bx, by, bz)].push_back(bi);
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}
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index.valid = true;
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}
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int find_block_index_for_point(const BlockBinIndex &index, const double *pox, const double *DH)
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{
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if (!index.valid)
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return -1;
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const int bx = coord_to_bin(pox[0], index.lo[0], index.inv[0], index.bins[0]);
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const int by = coord_to_bin(pox[1], index.lo[1], index.inv[1], index.bins[1]);
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const int bz = coord_to_bin(pox[2], index.lo[2], index.inv[2], index.bins[2]);
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const vector<int> &cand = index.bin_to_blocks[bin_loc(index, bx, by, bz)];
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for (size_t ci = 0; ci < cand.size(); ci++)
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{
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const int bi = cand[ci];
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if (point_in_block_view(index.views[bi], pox, DH))
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return bi;
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}
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// Fallback to full scan for numerical edge cases around bin boundaries.
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for (size_t bi = 0; bi < index.views.size(); bi++)
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if (point_in_block_view(index.views[bi], pox, DH))
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return int(bi);
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return -1;
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}
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} // namespace
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Patch::Patch(int DIM, int *shapei, double *bboxi, int levi, bool buflog, int Symmetry) : lev(levi)
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{
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@@ -367,9 +530,11 @@ void Patch::Interp_Points(MyList<var> *VarList,
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for (int j = 0; j < NN; j++)
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owner_rank[j] = -1;
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double DH[dim], llb[dim], uub[dim];
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double DH[dim];
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for (int i = 0; i < dim; i++)
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DH[i] = getdX(i);
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BlockBinIndex block_index;
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build_block_bin_index(this, DH, block_index);
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for (int j = 0; j < NN; j++) // run along points
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{
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@@ -392,57 +557,24 @@ void Patch::Interp_Points(MyList<var> *VarList,
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}
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}
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MyList<Block> *Bp = blb;
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bool notfind = true;
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while (notfind && Bp) // run along Blocks
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const int block_i = find_block_index_for_point(block_index, pox, DH);
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if (block_i >= 0)
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{
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Block *BP = Bp->data;
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bool flag = true;
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for (int i = 0; i < dim; i++)
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Block *BP = block_index.views[block_i].bp;
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owner_rank[j] = BP->rank;
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if (myrank == BP->rank)
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{
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#ifdef Vertex
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#ifdef Cell
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#error Both Cell and Vertex are defined
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#endif
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llb[i] = (feq(BP->bbox[i], bbox[i], DH[i] / 2)) ? BP->bbox[i] + lli[i] * DH[i] : BP->bbox[i] + (ghost_width - 0.5) * DH[i];
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uub[i] = (feq(BP->bbox[dim + i], bbox[dim + i], DH[i] / 2)) ? BP->bbox[dim + i] - uui[i] * DH[i] : BP->bbox[dim + i] - (ghost_width - 0.5) * DH[i];
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#else
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#ifdef Cell
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llb[i] = (feq(BP->bbox[i], bbox[i], DH[i] / 2)) ? BP->bbox[i] + lli[i] * DH[i] : BP->bbox[i] + ghost_width * DH[i];
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uub[i] = (feq(BP->bbox[dim + i], bbox[dim + i], DH[i] / 2)) ? BP->bbox[dim + i] - uui[i] * DH[i] : BP->bbox[dim + i] - ghost_width * DH[i];
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#else
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#error Not define Vertex nor Cell
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#endif
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#endif
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if (XX[i][j] - llb[i] < -DH[i] / 2 || XX[i][j] - uub[i] > DH[i] / 2)
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//---> interpolation
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varl = VarList;
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int k = 0;
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while (varl) // run along variables
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{
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flag = false;
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break;
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f_global_interp(BP->shape, BP->X[0], BP->X[1], BP->X[2], BP->fgfs[varl->data->sgfn], Shellf[j * num_var + k],
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pox[0], pox[1], pox[2], ordn, varl->data->SoA, Symmetry);
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varl = varl->next;
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k++;
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}
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}
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if (flag)
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{
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notfind = false;
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owner_rank[j] = BP->rank;
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if (myrank == BP->rank)
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{
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//---> interpolation
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varl = VarList;
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int k = 0;
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while (varl) // run along variables
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{
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f_global_interp(BP->shape, BP->X[0], BP->X[1], BP->X[2], BP->fgfs[varl->data->sgfn], Shellf[j * num_var + k],
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pox[0], pox[1], pox[2], ordn, varl->data->SoA, Symmetry);
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varl = varl->next;
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k++;
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}
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}
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}
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if (Bp == ble)
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break;
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Bp = Bp->next;
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}
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}
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@@ -535,9 +667,11 @@ void Patch::Interp_Points(MyList<var> *VarList,
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for (int j = 0; j < NN; j++)
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owner_rank[j] = -1;
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double DH[dim], llb[dim], uub[dim];
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double DH[dim];
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for (int i = 0; i < dim; i++)
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DH[i] = getdX(i);
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BlockBinIndex block_index;
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build_block_bin_index(this, DH, block_index);
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// --- Interpolation phase (identical to original) ---
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for (int j = 0; j < NN; j++)
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@@ -561,56 +695,23 @@ void Patch::Interp_Points(MyList<var> *VarList,
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}
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}
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MyList<Block> *Bp = blb;
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bool notfind = true;
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while (notfind && Bp)
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const int block_i = find_block_index_for_point(block_index, pox, DH);
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if (block_i >= 0)
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{
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Block *BP = Bp->data;
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bool flag = true;
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for (int i = 0; i < dim; i++)
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Block *BP = block_index.views[block_i].bp;
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owner_rank[j] = BP->rank;
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if (myrank == BP->rank)
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{
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#ifdef Vertex
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#ifdef Cell
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#error Both Cell and Vertex are defined
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#endif
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llb[i] = (feq(BP->bbox[i], bbox[i], DH[i] / 2)) ? BP->bbox[i] + lli[i] * DH[i] : BP->bbox[i] + (ghost_width - 0.5) * DH[i];
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uub[i] = (feq(BP->bbox[dim + i], bbox[dim + i], DH[i] / 2)) ? BP->bbox[dim + i] - uui[i] * DH[i] : BP->bbox[dim + i] - (ghost_width - 0.5) * DH[i];
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#else
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#ifdef Cell
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llb[i] = (feq(BP->bbox[i], bbox[i], DH[i] / 2)) ? BP->bbox[i] + lli[i] * DH[i] : BP->bbox[i] + ghost_width * DH[i];
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uub[i] = (feq(BP->bbox[dim + i], bbox[dim + i], DH[i] / 2)) ? BP->bbox[dim + i] - uui[i] * DH[i] : BP->bbox[dim + i] - ghost_width * DH[i];
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#else
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#error Not define Vertex nor Cell
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#endif
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#endif
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if (XX[i][j] - llb[i] < -DH[i] / 2 || XX[i][j] - uub[i] > DH[i] / 2)
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varl = VarList;
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int k = 0;
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while (varl)
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{
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flag = false;
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break;
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f_global_interp(BP->shape, BP->X[0], BP->X[1], BP->X[2], BP->fgfs[varl->data->sgfn], Shellf[j * num_var + k],
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pox[0], pox[1], pox[2], ordn, varl->data->SoA, Symmetry);
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varl = varl->next;
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k++;
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}
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}
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if (flag)
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{
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notfind = false;
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owner_rank[j] = BP->rank;
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if (myrank == BP->rank)
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{
|
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varl = VarList;
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int k = 0;
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while (varl)
|
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{
|
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f_global_interp(BP->shape, BP->X[0], BP->X[1], BP->X[2], BP->fgfs[varl->data->sgfn], Shellf[j * num_var + k],
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pox[0], pox[1], pox[2], ordn, varl->data->SoA, Symmetry);
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varl = varl->next;
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k++;
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}
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}
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}
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if (Bp == ble)
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break;
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Bp = Bp->next;
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}
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}
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@@ -833,9 +934,11 @@ void Patch::Interp_Points(MyList<var> *VarList,
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MPI_Comm_group(MPI_COMM_WORLD, &world_group);
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MPI_Comm_group(Comm_here, &local_group);
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double DH[dim], llb[dim], uub[dim];
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double DH[dim];
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for (int i = 0; i < dim; i++)
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DH[i] = getdX(i);
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BlockBinIndex block_index;
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build_block_bin_index(this, DH, block_index);
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for (int j = 0; j < NN; j++) // run along points
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{
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@@ -858,57 +961,24 @@ void Patch::Interp_Points(MyList<var> *VarList,
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}
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}
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MyList<Block> *Bp = blb;
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bool notfind = true;
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while (notfind && Bp) // run along Blocks
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const int block_i = find_block_index_for_point(block_index, pox, DH);
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if (block_i >= 0)
|
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{
|
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Block *BP = Bp->data;
|
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|
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bool flag = true;
|
||||
for (int i = 0; i < dim; i++)
|
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Block *BP = block_index.views[block_i].bp;
|
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owner_rank[j] = BP->rank;
|
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if (myrank == BP->rank)
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||||
{
|
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#ifdef Vertex
|
||||
#ifdef Cell
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#error Both Cell and Vertex are defined
|
||||
#endif
|
||||
llb[i] = (feq(BP->bbox[i], bbox[i], DH[i] / 2)) ? BP->bbox[i] + lli[i] * DH[i] : BP->bbox[i] + (ghost_width - 0.5) * DH[i];
|
||||
uub[i] = (feq(BP->bbox[dim + i], bbox[dim + i], DH[i] / 2)) ? BP->bbox[dim + i] - uui[i] * DH[i] : BP->bbox[dim + i] - (ghost_width - 0.5) * DH[i];
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||||
#else
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||||
#ifdef Cell
|
||||
llb[i] = (feq(BP->bbox[i], bbox[i], DH[i] / 2)) ? BP->bbox[i] + lli[i] * DH[i] : BP->bbox[i] + ghost_width * DH[i];
|
||||
uub[i] = (feq(BP->bbox[dim + i], bbox[dim + i], DH[i] / 2)) ? BP->bbox[dim + i] - uui[i] * DH[i] : BP->bbox[dim + i] - ghost_width * DH[i];
|
||||
#else
|
||||
#error Not define Vertex nor Cell
|
||||
#endif
|
||||
#endif
|
||||
if (XX[i][j] - llb[i] < -DH[i] / 2 || XX[i][j] - uub[i] > DH[i] / 2)
|
||||
//---> interpolation
|
||||
varl = VarList;
|
||||
int k = 0;
|
||||
while (varl) // run along variables
|
||||
{
|
||||
flag = false;
|
||||
break;
|
||||
f_global_interp(BP->shape, BP->X[0], BP->X[1], BP->X[2], BP->fgfs[varl->data->sgfn], Shellf[j * num_var + k],
|
||||
pox[0], pox[1], pox[2], ordn, varl->data->SoA, Symmetry);
|
||||
varl = varl->next;
|
||||
k++;
|
||||
}
|
||||
}
|
||||
|
||||
if (flag)
|
||||
{
|
||||
notfind = false;
|
||||
owner_rank[j] = BP->rank;
|
||||
if (myrank == BP->rank)
|
||||
{
|
||||
//---> interpolation
|
||||
varl = VarList;
|
||||
int k = 0;
|
||||
while (varl) // run along variables
|
||||
{
|
||||
f_global_interp(BP->shape, BP->X[0], BP->X[1], BP->X[2], BP->fgfs[varl->data->sgfn], Shellf[j * num_var + k],
|
||||
pox[0], pox[1], pox[2], ordn, varl->data->SoA, Symmetry);
|
||||
varl = varl->next;
|
||||
k++;
|
||||
}
|
||||
}
|
||||
}
|
||||
if (Bp == ble)
|
||||
break;
|
||||
Bp = Bp->next;
|
||||
}
|
||||
}
|
||||
|
||||
|
||||
@@ -3883,175 +3883,263 @@ int Parallel::data_packermix(double *data, MyList<Parallel::gridseg> *src, MyLis
|
||||
return size_out;
|
||||
}
|
||||
//
|
||||
void Parallel::transfer(MyList<Parallel::gridseg> **src, MyList<Parallel::gridseg> **dst,
|
||||
MyList<var> *VarList1 /* source */, MyList<var> *VarList2 /*target */,
|
||||
int Symmetry)
|
||||
{
|
||||
int myrank, cpusize;
|
||||
MPI_Comm_size(MPI_COMM_WORLD, &cpusize);
|
||||
MPI_Comm_rank(MPI_COMM_WORLD, &myrank);
|
||||
|
||||
int node;
|
||||
|
||||
MPI_Request *reqs;
|
||||
MPI_Status *stats;
|
||||
reqs = new MPI_Request[2 * cpusize];
|
||||
stats = new MPI_Status[2 * cpusize];
|
||||
int req_no = 0;
|
||||
|
||||
double **send_data, **rec_data;
|
||||
send_data = new double *[cpusize];
|
||||
rec_data = new double *[cpusize];
|
||||
int length;
|
||||
|
||||
for (node = 0; node < cpusize; node++)
|
||||
{
|
||||
send_data[node] = rec_data[node] = 0;
|
||||
if (node == myrank)
|
||||
{
|
||||
if (length = data_packer(0, src[myrank], dst[myrank], node, PACK, VarList1, VarList2, Symmetry))
|
||||
{
|
||||
rec_data[node] = new double[length];
|
||||
if (!rec_data[node])
|
||||
{
|
||||
cout << "out of memory when new in short transfer, place 1" << endl;
|
||||
MPI_Abort(MPI_COMM_WORLD, 1);
|
||||
}
|
||||
data_packer(rec_data[node], src[myrank], dst[myrank], node, PACK, VarList1, VarList2, Symmetry);
|
||||
}
|
||||
}
|
||||
else
|
||||
{
|
||||
// send from this cpu to cpu#node
|
||||
if (length = data_packer(0, src[myrank], dst[myrank], node, PACK, VarList1, VarList2, Symmetry))
|
||||
{
|
||||
send_data[node] = new double[length];
|
||||
if (!send_data[node])
|
||||
{
|
||||
cout << "out of memory when new in short transfer, place 2" << endl;
|
||||
MPI_Abort(MPI_COMM_WORLD, 1);
|
||||
}
|
||||
data_packer(send_data[node], src[myrank], dst[myrank], node, PACK, VarList1, VarList2, Symmetry);
|
||||
MPI_Isend((void *)send_data[node], length, MPI_DOUBLE, node, 1, MPI_COMM_WORLD, reqs + req_no++);
|
||||
}
|
||||
// receive from cpu#node to this cpu
|
||||
if (length = data_packer(0, src[node], dst[node], node, UNPACK, VarList1, VarList2, Symmetry))
|
||||
{
|
||||
rec_data[node] = new double[length];
|
||||
if (!rec_data[node])
|
||||
{
|
||||
cout << "out of memory when new in short transfer, place 3" << endl;
|
||||
MPI_Abort(MPI_COMM_WORLD, 1);
|
||||
}
|
||||
MPI_Irecv((void *)rec_data[node], length, MPI_DOUBLE, node, 1, MPI_COMM_WORLD, reqs + req_no++);
|
||||
}
|
||||
}
|
||||
}
|
||||
// wait for all requests to complete
|
||||
MPI_Waitall(req_no, reqs, stats);
|
||||
|
||||
for (node = 0; node < cpusize; node++)
|
||||
if (rec_data[node])
|
||||
data_packer(rec_data[node], src[node], dst[node], node, UNPACK, VarList1, VarList2, Symmetry);
|
||||
|
||||
for (node = 0; node < cpusize; node++)
|
||||
{
|
||||
if (send_data[node])
|
||||
delete[] send_data[node];
|
||||
if (rec_data[node])
|
||||
delete[] rec_data[node];
|
||||
}
|
||||
|
||||
delete[] reqs;
|
||||
delete[] stats;
|
||||
delete[] send_data;
|
||||
delete[] rec_data;
|
||||
}
|
||||
void Parallel::transfer(MyList<Parallel::gridseg> **src, MyList<Parallel::gridseg> **dst,
|
||||
MyList<var> *VarList1 /* source */, MyList<var> *VarList2 /*target */,
|
||||
int Symmetry)
|
||||
{
|
||||
int myrank, cpusize;
|
||||
MPI_Comm_size(MPI_COMM_WORLD, &cpusize);
|
||||
MPI_Comm_rank(MPI_COMM_WORLD, &myrank);
|
||||
|
||||
int node;
|
||||
|
||||
MPI_Request *reqs = new MPI_Request[2 * cpusize];
|
||||
MPI_Status *stats = new MPI_Status[2 * cpusize];
|
||||
int *req_node = new int[2 * cpusize];
|
||||
int *req_is_recv = new int[2 * cpusize];
|
||||
int *completed = new int[2 * cpusize];
|
||||
int req_no = 0;
|
||||
int pending_recv = 0;
|
||||
|
||||
double **send_data = new double *[cpusize];
|
||||
double **rec_data = new double *[cpusize];
|
||||
int *send_lengths = new int[cpusize];
|
||||
int *recv_lengths = new int[cpusize];
|
||||
|
||||
for (node = 0; node < cpusize; node++)
|
||||
{
|
||||
send_data[node] = rec_data[node] = 0;
|
||||
send_lengths[node] = recv_lengths[node] = 0;
|
||||
}
|
||||
|
||||
// Post receives first so peers can progress rendezvous early.
|
||||
for (node = 0; node < cpusize; node++)
|
||||
{
|
||||
if (node == myrank) continue;
|
||||
|
||||
recv_lengths[node] = data_packer(0, src[node], dst[node], node, UNPACK, VarList1, VarList2, Symmetry);
|
||||
if (recv_lengths[node] > 0)
|
||||
{
|
||||
rec_data[node] = new double[recv_lengths[node]];
|
||||
if (!rec_data[node])
|
||||
{
|
||||
cout << "out of memory when new in short transfer, place 1" << endl;
|
||||
MPI_Abort(MPI_COMM_WORLD, 1);
|
||||
}
|
||||
MPI_Irecv((void *)rec_data[node], recv_lengths[node], MPI_DOUBLE, node, 1, MPI_COMM_WORLD, reqs + req_no);
|
||||
req_node[req_no] = node;
|
||||
req_is_recv[req_no] = 1;
|
||||
req_no++;
|
||||
pending_recv++;
|
||||
}
|
||||
}
|
||||
|
||||
// Local transfer on this rank.
|
||||
recv_lengths[myrank] = data_packer(0, src[myrank], dst[myrank], myrank, PACK, VarList1, VarList2, Symmetry);
|
||||
if (recv_lengths[myrank] > 0)
|
||||
{
|
||||
rec_data[myrank] = new double[recv_lengths[myrank]];
|
||||
if (!rec_data[myrank])
|
||||
{
|
||||
cout << "out of memory when new in short transfer, place 2" << endl;
|
||||
MPI_Abort(MPI_COMM_WORLD, 1);
|
||||
}
|
||||
data_packer(rec_data[myrank], src[myrank], dst[myrank], myrank, PACK, VarList1, VarList2, Symmetry);
|
||||
}
|
||||
|
||||
// Pack and post sends.
|
||||
for (node = 0; node < cpusize; node++)
|
||||
{
|
||||
if (node == myrank) continue;
|
||||
|
||||
send_lengths[node] = data_packer(0, src[myrank], dst[myrank], node, PACK, VarList1, VarList2, Symmetry);
|
||||
if (send_lengths[node] > 0)
|
||||
{
|
||||
send_data[node] = new double[send_lengths[node]];
|
||||
if (!send_data[node])
|
||||
{
|
||||
cout << "out of memory when new in short transfer, place 3" << endl;
|
||||
MPI_Abort(MPI_COMM_WORLD, 1);
|
||||
}
|
||||
data_packer(send_data[node], src[myrank], dst[myrank], node, PACK, VarList1, VarList2, Symmetry);
|
||||
MPI_Isend((void *)send_data[node], send_lengths[node], MPI_DOUBLE, node, 1, MPI_COMM_WORLD, reqs + req_no);
|
||||
req_node[req_no] = node;
|
||||
req_is_recv[req_no] = 0;
|
||||
req_no++;
|
||||
}
|
||||
}
|
||||
|
||||
// Unpack as soon as receive completes to reduce pure wait time.
|
||||
while (pending_recv > 0)
|
||||
{
|
||||
int outcount = 0;
|
||||
MPI_Waitsome(req_no, reqs, &outcount, completed, stats);
|
||||
if (outcount == MPI_UNDEFINED) break;
|
||||
|
||||
for (int i = 0; i < outcount; i++)
|
||||
{
|
||||
int idx = completed[i];
|
||||
if (idx >= 0 && req_is_recv[idx])
|
||||
{
|
||||
int recv_node = req_node[idx];
|
||||
data_packer(rec_data[recv_node], src[recv_node], dst[recv_node], recv_node, UNPACK, VarList1, VarList2, Symmetry);
|
||||
pending_recv--;
|
||||
}
|
||||
}
|
||||
}
|
||||
|
||||
if (req_no > 0) MPI_Waitall(req_no, reqs, stats);
|
||||
|
||||
if (rec_data[myrank])
|
||||
data_packer(rec_data[myrank], src[myrank], dst[myrank], myrank, UNPACK, VarList1, VarList2, Symmetry);
|
||||
|
||||
for (node = 0; node < cpusize; node++)
|
||||
{
|
||||
if (send_data[node])
|
||||
delete[] send_data[node];
|
||||
if (rec_data[node])
|
||||
delete[] rec_data[node];
|
||||
}
|
||||
|
||||
delete[] reqs;
|
||||
delete[] stats;
|
||||
delete[] req_node;
|
||||
delete[] req_is_recv;
|
||||
delete[] completed;
|
||||
delete[] send_data;
|
||||
delete[] rec_data;
|
||||
delete[] send_lengths;
|
||||
delete[] recv_lengths;
|
||||
}
|
||||
//
|
||||
void Parallel::transfermix(MyList<Parallel::gridseg> **src, MyList<Parallel::gridseg> **dst,
|
||||
MyList<var> *VarList1 /* source */, MyList<var> *VarList2 /*target */,
|
||||
int Symmetry)
|
||||
{
|
||||
int myrank, cpusize;
|
||||
MPI_Comm_size(MPI_COMM_WORLD, &cpusize);
|
||||
MPI_Comm_rank(MPI_COMM_WORLD, &myrank);
|
||||
|
||||
int node;
|
||||
|
||||
MPI_Request *reqs;
|
||||
MPI_Status *stats;
|
||||
reqs = new MPI_Request[2 * cpusize];
|
||||
stats = new MPI_Status[2 * cpusize];
|
||||
int req_no = 0;
|
||||
|
||||
double **send_data, **rec_data;
|
||||
send_data = new double *[cpusize];
|
||||
rec_data = new double *[cpusize];
|
||||
int length;
|
||||
|
||||
for (node = 0; node < cpusize; node++)
|
||||
{
|
||||
send_data[node] = rec_data[node] = 0;
|
||||
if (node == myrank)
|
||||
{
|
||||
if (length = data_packermix(0, src[myrank], dst[myrank], node, PACK, VarList1, VarList2, Symmetry))
|
||||
{
|
||||
rec_data[node] = new double[length];
|
||||
if (!rec_data[node])
|
||||
{
|
||||
cout << "out of memory when new in short transfer, place 1" << endl;
|
||||
MPI_Abort(MPI_COMM_WORLD, 1);
|
||||
}
|
||||
data_packermix(rec_data[node], src[myrank], dst[myrank], node, PACK, VarList1, VarList2, Symmetry);
|
||||
}
|
||||
}
|
||||
else
|
||||
{
|
||||
// send from this cpu to cpu#node
|
||||
if (length = data_packermix(0, src[myrank], dst[myrank], node, PACK, VarList1, VarList2, Symmetry))
|
||||
{
|
||||
send_data[node] = new double[length];
|
||||
if (!send_data[node])
|
||||
{
|
||||
cout << "out of memory when new in short transfer, place 2" << endl;
|
||||
MPI_Abort(MPI_COMM_WORLD, 1);
|
||||
}
|
||||
data_packermix(send_data[node], src[myrank], dst[myrank], node, PACK, VarList1, VarList2, Symmetry);
|
||||
MPI_Isend((void *)send_data[node], length, MPI_DOUBLE, node, 1, MPI_COMM_WORLD, reqs + req_no++);
|
||||
}
|
||||
// receive from cpu#node to this cpu
|
||||
if (length = data_packermix(0, src[node], dst[node], node, UNPACK, VarList1, VarList2, Symmetry))
|
||||
{
|
||||
rec_data[node] = new double[length];
|
||||
if (!rec_data[node])
|
||||
{
|
||||
cout << "out of memory when new in short transfer, place 3" << endl;
|
||||
MPI_Abort(MPI_COMM_WORLD, 1);
|
||||
}
|
||||
MPI_Irecv((void *)rec_data[node], length, MPI_DOUBLE, node, 1, MPI_COMM_WORLD, reqs + req_no++);
|
||||
}
|
||||
}
|
||||
}
|
||||
// wait for all requests to complete
|
||||
MPI_Waitall(req_no, reqs, stats);
|
||||
|
||||
for (node = 0; node < cpusize; node++)
|
||||
if (rec_data[node])
|
||||
data_packermix(rec_data[node], src[node], dst[node], node, UNPACK, VarList1, VarList2, Symmetry);
|
||||
|
||||
for (node = 0; node < cpusize; node++)
|
||||
{
|
||||
if (send_data[node])
|
||||
delete[] send_data[node];
|
||||
if (rec_data[node])
|
||||
delete[] rec_data[node];
|
||||
}
|
||||
|
||||
delete[] reqs;
|
||||
delete[] stats;
|
||||
delete[] send_data;
|
||||
delete[] rec_data;
|
||||
}
|
||||
void Parallel::transfermix(MyList<Parallel::gridseg> **src, MyList<Parallel::gridseg> **dst,
|
||||
MyList<var> *VarList1 /* source */, MyList<var> *VarList2 /*target */,
|
||||
int Symmetry)
|
||||
{
|
||||
int myrank, cpusize;
|
||||
MPI_Comm_size(MPI_COMM_WORLD, &cpusize);
|
||||
MPI_Comm_rank(MPI_COMM_WORLD, &myrank);
|
||||
|
||||
int node;
|
||||
|
||||
MPI_Request *reqs = new MPI_Request[2 * cpusize];
|
||||
MPI_Status *stats = new MPI_Status[2 * cpusize];
|
||||
int *req_node = new int[2 * cpusize];
|
||||
int *req_is_recv = new int[2 * cpusize];
|
||||
int *completed = new int[2 * cpusize];
|
||||
int req_no = 0;
|
||||
int pending_recv = 0;
|
||||
|
||||
double **send_data = new double *[cpusize];
|
||||
double **rec_data = new double *[cpusize];
|
||||
int *send_lengths = new int[cpusize];
|
||||
int *recv_lengths = new int[cpusize];
|
||||
|
||||
for (node = 0; node < cpusize; node++)
|
||||
{
|
||||
send_data[node] = rec_data[node] = 0;
|
||||
send_lengths[node] = recv_lengths[node] = 0;
|
||||
}
|
||||
|
||||
// Post receives first so peers can progress rendezvous early.
|
||||
for (node = 0; node < cpusize; node++)
|
||||
{
|
||||
if (node == myrank) continue;
|
||||
|
||||
recv_lengths[node] = data_packermix(0, src[node], dst[node], node, UNPACK, VarList1, VarList2, Symmetry);
|
||||
if (recv_lengths[node] > 0)
|
||||
{
|
||||
rec_data[node] = new double[recv_lengths[node]];
|
||||
if (!rec_data[node])
|
||||
{
|
||||
cout << "out of memory when new in short transfer, place 1" << endl;
|
||||
MPI_Abort(MPI_COMM_WORLD, 1);
|
||||
}
|
||||
MPI_Irecv((void *)rec_data[node], recv_lengths[node], MPI_DOUBLE, node, 1, MPI_COMM_WORLD, reqs + req_no);
|
||||
req_node[req_no] = node;
|
||||
req_is_recv[req_no] = 1;
|
||||
req_no++;
|
||||
pending_recv++;
|
||||
}
|
||||
}
|
||||
|
||||
// Local transfer on this rank.
|
||||
recv_lengths[myrank] = data_packermix(0, src[myrank], dst[myrank], myrank, PACK, VarList1, VarList2, Symmetry);
|
||||
if (recv_lengths[myrank] > 0)
|
||||
{
|
||||
rec_data[myrank] = new double[recv_lengths[myrank]];
|
||||
if (!rec_data[myrank])
|
||||
{
|
||||
cout << "out of memory when new in short transfer, place 2" << endl;
|
||||
MPI_Abort(MPI_COMM_WORLD, 1);
|
||||
}
|
||||
data_packermix(rec_data[myrank], src[myrank], dst[myrank], myrank, PACK, VarList1, VarList2, Symmetry);
|
||||
}
|
||||
|
||||
// Pack and post sends.
|
||||
for (node = 0; node < cpusize; node++)
|
||||
{
|
||||
if (node == myrank) continue;
|
||||
|
||||
send_lengths[node] = data_packermix(0, src[myrank], dst[myrank], node, PACK, VarList1, VarList2, Symmetry);
|
||||
if (send_lengths[node] > 0)
|
||||
{
|
||||
send_data[node] = new double[send_lengths[node]];
|
||||
if (!send_data[node])
|
||||
{
|
||||
cout << "out of memory when new in short transfer, place 3" << endl;
|
||||
MPI_Abort(MPI_COMM_WORLD, 1);
|
||||
}
|
||||
data_packermix(send_data[node], src[myrank], dst[myrank], node, PACK, VarList1, VarList2, Symmetry);
|
||||
MPI_Isend((void *)send_data[node], send_lengths[node], MPI_DOUBLE, node, 1, MPI_COMM_WORLD, reqs + req_no);
|
||||
req_node[req_no] = node;
|
||||
req_is_recv[req_no] = 0;
|
||||
req_no++;
|
||||
}
|
||||
}
|
||||
|
||||
// Unpack as soon as receive completes to reduce pure wait time.
|
||||
while (pending_recv > 0)
|
||||
{
|
||||
int outcount = 0;
|
||||
MPI_Waitsome(req_no, reqs, &outcount, completed, stats);
|
||||
if (outcount == MPI_UNDEFINED) break;
|
||||
|
||||
for (int i = 0; i < outcount; i++)
|
||||
{
|
||||
int idx = completed[i];
|
||||
if (idx >= 0 && req_is_recv[idx])
|
||||
{
|
||||
int recv_node = req_node[idx];
|
||||
data_packermix(rec_data[recv_node], src[recv_node], dst[recv_node], recv_node, UNPACK, VarList1, VarList2, Symmetry);
|
||||
pending_recv--;
|
||||
}
|
||||
}
|
||||
}
|
||||
|
||||
if (req_no > 0) MPI_Waitall(req_no, reqs, stats);
|
||||
|
||||
if (rec_data[myrank])
|
||||
data_packermix(rec_data[myrank], src[myrank], dst[myrank], myrank, UNPACK, VarList1, VarList2, Symmetry);
|
||||
|
||||
for (node = 0; node < cpusize; node++)
|
||||
{
|
||||
if (send_data[node])
|
||||
delete[] send_data[node];
|
||||
if (rec_data[node])
|
||||
delete[] rec_data[node];
|
||||
}
|
||||
|
||||
delete[] reqs;
|
||||
delete[] stats;
|
||||
delete[] req_node;
|
||||
delete[] req_is_recv;
|
||||
delete[] completed;
|
||||
delete[] send_data;
|
||||
delete[] rec_data;
|
||||
delete[] send_lengths;
|
||||
delete[] recv_lengths;
|
||||
}
|
||||
void Parallel::Sync(Patch *Pat, MyList<var> *VarList, int Symmetry)
|
||||
{
|
||||
int cpusize;
|
||||
@@ -4279,73 +4367,110 @@ void Parallel::SyncCache::destroy()
|
||||
cpusize = 0; max_reqs = 0;
|
||||
}
|
||||
// transfer_cached: reuse pre-allocated buffers from SyncCache
|
||||
void Parallel::transfer_cached(MyList<Parallel::gridseg> **src, MyList<Parallel::gridseg> **dst,
|
||||
MyList<var> *VarList1, MyList<var> *VarList2,
|
||||
int Symmetry, SyncCache &cache)
|
||||
{
|
||||
int myrank;
|
||||
void Parallel::transfer_cached(MyList<Parallel::gridseg> **src, MyList<Parallel::gridseg> **dst,
|
||||
MyList<var> *VarList1, MyList<var> *VarList2,
|
||||
int Symmetry, SyncCache &cache)
|
||||
{
|
||||
int myrank;
|
||||
MPI_Comm_size(MPI_COMM_WORLD, &cache.cpusize);
|
||||
MPI_Comm_rank(MPI_COMM_WORLD, &myrank);
|
||||
int cpusize = cache.cpusize;
|
||||
|
||||
int req_no = 0;
|
||||
int node;
|
||||
|
||||
for (node = 0; node < cpusize; node++)
|
||||
{
|
||||
if (node == myrank)
|
||||
{
|
||||
int length = data_packer(0, src[myrank], dst[myrank], node, PACK, VarList1, VarList2, Symmetry);
|
||||
cache.recv_lengths[node] = length;
|
||||
if (length > 0)
|
||||
{
|
||||
if (length > cache.recv_buf_caps[node])
|
||||
{
|
||||
if (cache.recv_bufs[node]) delete[] cache.recv_bufs[node];
|
||||
cache.recv_bufs[node] = new double[length];
|
||||
cache.recv_buf_caps[node] = length;
|
||||
}
|
||||
data_packer(cache.recv_bufs[node], src[myrank], dst[myrank], node, PACK, VarList1, VarList2, Symmetry);
|
||||
}
|
||||
}
|
||||
else
|
||||
{
|
||||
// send
|
||||
int slength = data_packer(0, src[myrank], dst[myrank], node, PACK, VarList1, VarList2, Symmetry);
|
||||
cache.send_lengths[node] = slength;
|
||||
if (slength > 0)
|
||||
{
|
||||
if (slength > cache.send_buf_caps[node])
|
||||
{
|
||||
if (cache.send_bufs[node]) delete[] cache.send_bufs[node];
|
||||
cache.send_bufs[node] = new double[slength];
|
||||
cache.send_buf_caps[node] = slength;
|
||||
}
|
||||
data_packer(cache.send_bufs[node], src[myrank], dst[myrank], node, PACK, VarList1, VarList2, Symmetry);
|
||||
MPI_Isend((void *)cache.send_bufs[node], slength, MPI_DOUBLE, node, 1, MPI_COMM_WORLD, cache.reqs + req_no++);
|
||||
}
|
||||
// recv
|
||||
int rlength = data_packer(0, src[node], dst[node], node, UNPACK, VarList1, VarList2, Symmetry);
|
||||
cache.recv_lengths[node] = rlength;
|
||||
if (rlength > 0)
|
||||
{
|
||||
if (rlength > cache.recv_buf_caps[node])
|
||||
{
|
||||
if (cache.recv_bufs[node]) delete[] cache.recv_bufs[node];
|
||||
cache.recv_bufs[node] = new double[rlength];
|
||||
cache.recv_buf_caps[node] = rlength;
|
||||
}
|
||||
MPI_Irecv((void *)cache.recv_bufs[node], rlength, MPI_DOUBLE, node, 1, MPI_COMM_WORLD, cache.reqs + req_no++);
|
||||
}
|
||||
}
|
||||
}
|
||||
|
||||
MPI_Waitall(req_no, cache.reqs, cache.stats);
|
||||
|
||||
for (node = 0; node < cpusize; node++)
|
||||
if (cache.recv_bufs[node] && cache.recv_lengths[node] > 0)
|
||||
data_packer(cache.recv_bufs[node], src[node], dst[node], node, UNPACK, VarList1, VarList2, Symmetry);
|
||||
}
|
||||
int req_no = 0;
|
||||
int pending_recv = 0;
|
||||
int node;
|
||||
int *req_node = new int[cache.max_reqs];
|
||||
int *req_is_recv = new int[cache.max_reqs];
|
||||
int *completed = new int[cache.max_reqs];
|
||||
|
||||
// Post receives first so peers can progress rendezvous early.
|
||||
for (node = 0; node < cpusize; node++)
|
||||
{
|
||||
if (node == myrank) continue;
|
||||
|
||||
int rlength = data_packer(0, src[node], dst[node], node, UNPACK, VarList1, VarList2, Symmetry);
|
||||
cache.recv_lengths[node] = rlength;
|
||||
if (rlength > 0)
|
||||
{
|
||||
if (rlength > cache.recv_buf_caps[node])
|
||||
{
|
||||
if (cache.recv_bufs[node]) delete[] cache.recv_bufs[node];
|
||||
cache.recv_bufs[node] = new double[rlength];
|
||||
cache.recv_buf_caps[node] = rlength;
|
||||
}
|
||||
MPI_Irecv((void *)cache.recv_bufs[node], rlength, MPI_DOUBLE, node, 1, MPI_COMM_WORLD, cache.reqs + req_no);
|
||||
req_node[req_no] = node;
|
||||
req_is_recv[req_no] = 1;
|
||||
req_no++;
|
||||
pending_recv++;
|
||||
}
|
||||
}
|
||||
|
||||
// Local transfer on this rank.
|
||||
int self_len = data_packer(0, src[myrank], dst[myrank], myrank, PACK, VarList1, VarList2, Symmetry);
|
||||
cache.recv_lengths[myrank] = self_len;
|
||||
if (self_len > 0)
|
||||
{
|
||||
if (self_len > cache.recv_buf_caps[myrank])
|
||||
{
|
||||
if (cache.recv_bufs[myrank]) delete[] cache.recv_bufs[myrank];
|
||||
cache.recv_bufs[myrank] = new double[self_len];
|
||||
cache.recv_buf_caps[myrank] = self_len;
|
||||
}
|
||||
data_packer(cache.recv_bufs[myrank], src[myrank], dst[myrank], myrank, PACK, VarList1, VarList2, Symmetry);
|
||||
}
|
||||
|
||||
// Pack and post sends.
|
||||
for (node = 0; node < cpusize; node++)
|
||||
{
|
||||
if (node == myrank) continue;
|
||||
|
||||
int slength = data_packer(0, src[myrank], dst[myrank], node, PACK, VarList1, VarList2, Symmetry);
|
||||
cache.send_lengths[node] = slength;
|
||||
if (slength > 0)
|
||||
{
|
||||
if (slength > cache.send_buf_caps[node])
|
||||
{
|
||||
if (cache.send_bufs[node]) delete[] cache.send_bufs[node];
|
||||
cache.send_bufs[node] = new double[slength];
|
||||
cache.send_buf_caps[node] = slength;
|
||||
}
|
||||
data_packer(cache.send_bufs[node], src[myrank], dst[myrank], node, PACK, VarList1, VarList2, Symmetry);
|
||||
MPI_Isend((void *)cache.send_bufs[node], slength, MPI_DOUBLE, node, 1, MPI_COMM_WORLD, cache.reqs + req_no);
|
||||
req_node[req_no] = node;
|
||||
req_is_recv[req_no] = 0;
|
||||
req_no++;
|
||||
}
|
||||
}
|
||||
|
||||
// Unpack as soon as receive completes to reduce pure wait time.
|
||||
while (pending_recv > 0)
|
||||
{
|
||||
int outcount = 0;
|
||||
MPI_Waitsome(req_no, cache.reqs, &outcount, completed, cache.stats);
|
||||
if (outcount == MPI_UNDEFINED) break;
|
||||
|
||||
for (int i = 0; i < outcount; i++)
|
||||
{
|
||||
int idx = completed[i];
|
||||
if (idx >= 0 && req_is_recv[idx])
|
||||
{
|
||||
int recv_node_i = req_node[idx];
|
||||
data_packer(cache.recv_bufs[recv_node_i], src[recv_node_i], dst[recv_node_i], recv_node_i, UNPACK, VarList1, VarList2, Symmetry);
|
||||
pending_recv--;
|
||||
}
|
||||
}
|
||||
}
|
||||
|
||||
if (req_no > 0) MPI_Waitall(req_no, cache.reqs, cache.stats);
|
||||
|
||||
if (self_len > 0)
|
||||
data_packer(cache.recv_bufs[myrank], src[myrank], dst[myrank], myrank, UNPACK, VarList1, VarList2, Symmetry);
|
||||
|
||||
delete[] req_node;
|
||||
delete[] req_is_recv;
|
||||
delete[] completed;
|
||||
}
|
||||
// Sync_cached: build grid segment lists on first call, reuse on subsequent calls
|
||||
void Parallel::Sync_cached(MyList<Patch> *PatL, MyList<var> *VarList, int Symmetry, SyncCache &cache)
|
||||
{
|
||||
@@ -5758,9 +5883,9 @@ void Parallel::OutBdLow2Hi_cached(MyList<Patch> *PatcL, MyList<Patch> *PatfL,
|
||||
}
|
||||
|
||||
// OutBdLow2Himix_cached: same as OutBdLow2Hi_cached but uses transfermix for unpacking
|
||||
void Parallel::OutBdLow2Himix_cached(MyList<Patch> *PatcL, MyList<Patch> *PatfL,
|
||||
MyList<var> *VarList1, MyList<var> *VarList2,
|
||||
int Symmetry, SyncCache &cache)
|
||||
void Parallel::OutBdLow2Himix_cached(MyList<Patch> *PatcL, MyList<Patch> *PatfL,
|
||||
MyList<var> *VarList1, MyList<var> *VarList2,
|
||||
int Symmetry, SyncCache &cache)
|
||||
{
|
||||
if (!cache.valid)
|
||||
{
|
||||
@@ -5806,60 +5931,100 @@ void Parallel::OutBdLow2Himix_cached(MyList<Patch> *PatcL, MyList<Patch> *PatfL,
|
||||
MPI_Comm_rank(MPI_COMM_WORLD, &myrank);
|
||||
int cpusize = cache.cpusize;
|
||||
|
||||
int req_no = 0;
|
||||
for (int node = 0; node < cpusize; node++)
|
||||
{
|
||||
if (node == myrank)
|
||||
{
|
||||
int length = data_packermix(0, cache.combined_src[myrank], cache.combined_dst[myrank], node, PACK, VarList1, VarList2, Symmetry);
|
||||
cache.recv_lengths[node] = length;
|
||||
if (length > 0)
|
||||
{
|
||||
if (length > cache.recv_buf_caps[node])
|
||||
{
|
||||
if (cache.recv_bufs[node]) delete[] cache.recv_bufs[node];
|
||||
cache.recv_bufs[node] = new double[length];
|
||||
cache.recv_buf_caps[node] = length;
|
||||
}
|
||||
data_packermix(cache.recv_bufs[node], cache.combined_src[myrank], cache.combined_dst[myrank], node, PACK, VarList1, VarList2, Symmetry);
|
||||
}
|
||||
}
|
||||
else
|
||||
{
|
||||
int slength = data_packermix(0, cache.combined_src[myrank], cache.combined_dst[myrank], node, PACK, VarList1, VarList2, Symmetry);
|
||||
cache.send_lengths[node] = slength;
|
||||
if (slength > 0)
|
||||
{
|
||||
if (slength > cache.send_buf_caps[node])
|
||||
{
|
||||
if (cache.send_bufs[node]) delete[] cache.send_bufs[node];
|
||||
cache.send_bufs[node] = new double[slength];
|
||||
cache.send_buf_caps[node] = slength;
|
||||
}
|
||||
data_packermix(cache.send_bufs[node], cache.combined_src[myrank], cache.combined_dst[myrank], node, PACK, VarList1, VarList2, Symmetry);
|
||||
MPI_Isend((void *)cache.send_bufs[node], slength, MPI_DOUBLE, node, 1, MPI_COMM_WORLD, cache.reqs + req_no++);
|
||||
}
|
||||
int rlength = data_packermix(0, cache.combined_src[node], cache.combined_dst[node], node, UNPACK, VarList1, VarList2, Symmetry);
|
||||
cache.recv_lengths[node] = rlength;
|
||||
if (rlength > 0)
|
||||
{
|
||||
if (rlength > cache.recv_buf_caps[node])
|
||||
{
|
||||
if (cache.recv_bufs[node]) delete[] cache.recv_bufs[node];
|
||||
cache.recv_bufs[node] = new double[rlength];
|
||||
cache.recv_buf_caps[node] = rlength;
|
||||
}
|
||||
MPI_Irecv((void *)cache.recv_bufs[node], rlength, MPI_DOUBLE, node, 1, MPI_COMM_WORLD, cache.reqs + req_no++);
|
||||
}
|
||||
}
|
||||
}
|
||||
|
||||
MPI_Waitall(req_no, cache.reqs, cache.stats);
|
||||
|
||||
for (int node = 0; node < cpusize; node++)
|
||||
if (cache.recv_bufs[node] && cache.recv_lengths[node] > 0)
|
||||
data_packermix(cache.recv_bufs[node], cache.combined_src[node], cache.combined_dst[node], node, UNPACK, VarList1, VarList2, Symmetry);
|
||||
}
|
||||
int req_no = 0;
|
||||
int pending_recv = 0;
|
||||
int *req_node = new int[cache.max_reqs];
|
||||
int *req_is_recv = new int[cache.max_reqs];
|
||||
int *completed = new int[cache.max_reqs];
|
||||
|
||||
// Post receives first so peers can progress rendezvous early.
|
||||
for (int node = 0; node < cpusize; node++)
|
||||
{
|
||||
if (node == myrank) continue;
|
||||
|
||||
int rlength = data_packermix(0, cache.combined_src[node], cache.combined_dst[node], node, UNPACK, VarList1, VarList2, Symmetry);
|
||||
cache.recv_lengths[node] = rlength;
|
||||
if (rlength > 0)
|
||||
{
|
||||
if (rlength > cache.recv_buf_caps[node])
|
||||
{
|
||||
if (cache.recv_bufs[node]) delete[] cache.recv_bufs[node];
|
||||
cache.recv_bufs[node] = new double[rlength];
|
||||
cache.recv_buf_caps[node] = rlength;
|
||||
}
|
||||
MPI_Irecv((void *)cache.recv_bufs[node], rlength, MPI_DOUBLE, node, 1, MPI_COMM_WORLD, cache.reqs + req_no);
|
||||
req_node[req_no] = node;
|
||||
req_is_recv[req_no] = 1;
|
||||
req_no++;
|
||||
pending_recv++;
|
||||
}
|
||||
}
|
||||
|
||||
// Local transfer on this rank.
|
||||
int self_len = data_packermix(0, cache.combined_src[myrank], cache.combined_dst[myrank], myrank, PACK, VarList1, VarList2, Symmetry);
|
||||
cache.recv_lengths[myrank] = self_len;
|
||||
if (self_len > 0)
|
||||
{
|
||||
if (self_len > cache.recv_buf_caps[myrank])
|
||||
{
|
||||
if (cache.recv_bufs[myrank]) delete[] cache.recv_bufs[myrank];
|
||||
cache.recv_bufs[myrank] = new double[self_len];
|
||||
cache.recv_buf_caps[myrank] = self_len;
|
||||
}
|
||||
data_packermix(cache.recv_bufs[myrank], cache.combined_src[myrank], cache.combined_dst[myrank], myrank, PACK, VarList1, VarList2, Symmetry);
|
||||
}
|
||||
|
||||
// Pack and post sends.
|
||||
for (int node = 0; node < cpusize; node++)
|
||||
{
|
||||
if (node == myrank) continue;
|
||||
|
||||
int slength = data_packermix(0, cache.combined_src[myrank], cache.combined_dst[myrank], node, PACK, VarList1, VarList2, Symmetry);
|
||||
cache.send_lengths[node] = slength;
|
||||
if (slength > 0)
|
||||
{
|
||||
if (slength > cache.send_buf_caps[node])
|
||||
{
|
||||
if (cache.send_bufs[node]) delete[] cache.send_bufs[node];
|
||||
cache.send_bufs[node] = new double[slength];
|
||||
cache.send_buf_caps[node] = slength;
|
||||
}
|
||||
data_packermix(cache.send_bufs[node], cache.combined_src[myrank], cache.combined_dst[myrank], node, PACK, VarList1, VarList2, Symmetry);
|
||||
MPI_Isend((void *)cache.send_bufs[node], slength, MPI_DOUBLE, node, 1, MPI_COMM_WORLD, cache.reqs + req_no);
|
||||
req_node[req_no] = node;
|
||||
req_is_recv[req_no] = 0;
|
||||
req_no++;
|
||||
}
|
||||
}
|
||||
|
||||
// Unpack as soon as receive completes to reduce pure wait time.
|
||||
while (pending_recv > 0)
|
||||
{
|
||||
int outcount = 0;
|
||||
MPI_Waitsome(req_no, cache.reqs, &outcount, completed, cache.stats);
|
||||
if (outcount == MPI_UNDEFINED) break;
|
||||
|
||||
for (int i = 0; i < outcount; i++)
|
||||
{
|
||||
int idx = completed[i];
|
||||
if (idx >= 0 && req_is_recv[idx])
|
||||
{
|
||||
int recv_node_i = req_node[idx];
|
||||
data_packermix(cache.recv_bufs[recv_node_i], cache.combined_src[recv_node_i], cache.combined_dst[recv_node_i], recv_node_i, UNPACK, VarList1, VarList2, Symmetry);
|
||||
pending_recv--;
|
||||
}
|
||||
}
|
||||
}
|
||||
|
||||
if (req_no > 0) MPI_Waitall(req_no, cache.reqs, cache.stats);
|
||||
|
||||
if (self_len > 0)
|
||||
data_packermix(cache.recv_bufs[myrank], cache.combined_src[myrank], cache.combined_dst[myrank], myrank, UNPACK, VarList1, VarList2, Symmetry);
|
||||
|
||||
delete[] req_node;
|
||||
delete[] req_is_recv;
|
||||
delete[] completed;
|
||||
}
|
||||
|
||||
// collect all buffer grid segments or blocks for given patch
|
||||
MyList<Parallel::gridseg> *Parallel::build_buffer_gsl(Patch *Pat)
|
||||
|
||||
@@ -39,6 +39,7 @@ int f_compute_rhs_bssn(int *ex, double &T,
|
||||
// printf("nx=%d ny=%d nz=%d all=%d\n", nx, ny, nz, all);
|
||||
|
||||
// temp variable
|
||||
double gxx[all],gyy[all],gzz[all];
|
||||
double chix[all],chiy[all],chiz[all];
|
||||
double gxxx[all],gxyx[all],gxzx[all],gyyx[all],gyzx[all],gzzx[all];
|
||||
double gxxy[all],gxyy[all],gxzy[all],gyyy[all],gyzy[all],gzzy[all];
|
||||
@@ -50,9 +51,9 @@ int f_compute_rhs_bssn(int *ex, double &T,
|
||||
double Gamxx[all],Gamxy[all],Gamxz[all];
|
||||
double Gamyx[all],Gamyy[all],Gamyz[all];
|
||||
double Gamzx[all],Gamzy[all],Gamzz[all];
|
||||
double Kx[all], Ky[all], Kz[all], S[all];
|
||||
double Kx[all], Ky[all], Kz[all], div_beta[all], S[all];
|
||||
double f[all], fxx[all], fxy[all], fxz[all], fyy[all], fyz[all], fzz[all];
|
||||
double alpn1[all], chin1[all];
|
||||
double Gamxa[all], Gamya[all], Gamza[all], alpn1[all], chin1[all];
|
||||
double gupxx[all], gupxy[all], gupxz[all];
|
||||
double gupyy[all], gupyz[all], gupzz[all];
|
||||
double SSS[3] = { 1.0, 1.0, 1.0};
|
||||
@@ -106,6 +107,9 @@ int f_compute_rhs_bssn(int *ex, double &T,
|
||||
for(int i=0;i<all;i+=1){
|
||||
alpn1[i] = Lap[i] + 1.0;
|
||||
chin1[i] = chi[i] + 1.0;
|
||||
gxx[i] = dxx[i] + 1.0;
|
||||
gyy[i] = dyy[i] + 1.0;
|
||||
gzz[i] = dzz[i] + 1.0;
|
||||
}
|
||||
// 9ms //
|
||||
fderivs(ex,betax,betaxx,betaxy,betaxz,X,Y,Z,ANTI, SYM, SYM,Symmetry,Lev);
|
||||
@@ -123,196 +127,231 @@ int f_compute_rhs_bssn(int *ex, double &T,
|
||||
|
||||
// 3ms //
|
||||
for(int i=0;i<all;i+=1){
|
||||
const double divb = betaxx[i] + betayy[i] + betazz[i];
|
||||
chi_rhs[i] = F2o3 * chin1[i] * (alpn1[i] * trK[i] - divb);
|
||||
gxx_rhs[i] = -TWO * alpn1[i] * Axx[i] - F2o3 * (dxx[i] + ONE) * divb +
|
||||
TWO * ((dxx[i] + ONE) * betaxx[i] + gxy[i] * betayx[i] + gxz[i] * betazx[i]);
|
||||
gyy_rhs[i] = -TWO * alpn1[i] * Ayy[i] - F2o3 * (dyy[i] + ONE) * divb +
|
||||
TWO * (gxy[i] * betaxy[i] + (dyy[i] + ONE) * betayy[i] + gyz[i] * betazy[i]);
|
||||
gzz_rhs[i] = -TWO * alpn1[i] * Azz[i] - F2o3 * (dzz[i] + ONE) * divb +
|
||||
TWO * (gxz[i] * betaxz[i] + gyz[i] * betayz[i] + (dzz[i] + ONE) * betazz[i]);
|
||||
gxy_rhs[i] = -TWO * alpn1[i] * Axy[i] + F1o3 * gxy[i] * divb +
|
||||
(dxx[i] + ONE) * betaxy[i] + gxz[i] * betazy[i] + (dyy[i] + ONE) * betayx[i]
|
||||
div_beta[i] = betaxx[i] + betayy[i] + betazz[i];
|
||||
chi_rhs[i] = F2o3 * chin1[i] * (alpn1[i] * trK[i] - div_beta[i]);
|
||||
gxx_rhs[i] = -TWO * alpn1[i] * Axx[i] - F2o3 * gxx[i] * div_beta[i] +
|
||||
TWO * (gxx[i] * betaxx[i] + gxy[i] * betayx[i] + gxz[i] * betazx[i]);
|
||||
gyy_rhs[i] = -TWO * alpn1[i] * Ayy[i] - F2o3 * gyy[i] * div_beta[i] +
|
||||
TWO * (gxy[i] * betaxy[i] + gyy[i] * betayy[i] + gyz[i] * betazy[i]);
|
||||
gzz_rhs[i] = -TWO * alpn1[i] * Azz[i] - F2o3 * gzz[i] * div_beta[i] +
|
||||
TWO * (gxz[i] * betaxz[i] + gyz[i] * betayz[i] + gzz[i] * betazz[i]);
|
||||
gxy_rhs[i] = -TWO * alpn1[i] * Axy[i] + F1o3 * gxy[i] * div_beta[i] +
|
||||
gxx[i] * betaxy[i] + gxz[i] * betazy[i] + gyy[i] * betayx[i]
|
||||
+ gyz[i] * betazx[i] - gxy[i] * betazz[i];
|
||||
gyz_rhs[i] = -TWO * alpn1[i] * Ayz[i] + F1o3 * gyz[i] * divb +
|
||||
gxy[i] * betaxz[i] + (dyy[i] + ONE) * betayz[i] + gxz[i] * betaxy[i]
|
||||
+ (dzz[i] + ONE) * betazy[i] - gyz[i] * betaxx[i];
|
||||
gxz_rhs[i] = -TWO * alpn1[i] * Axz[i] + F1o3 * gxz[i] * divb +
|
||||
(dxx[i] + ONE) * betaxz[i] + gxy[i] * betayz[i] + gyz[i] * betayx[i]
|
||||
+ (dzz[i] + ONE) * betazx[i] - gxz[i] * betayy[i];
|
||||
gyz_rhs[i] = -TWO * alpn1[i] * Ayz[i] + F1o3 * gyz[i] * div_beta[i] +
|
||||
gxy[i] * betaxz[i] + gyy[i] * betayz[i] + gxz[i] * betaxy[i]
|
||||
+ gzz[i] * betazy[i] - gyz[i] * betaxx[i];
|
||||
gxz_rhs[i] = -TWO * alpn1[i] * Axz[i] + F1o3 * gxz[i] * div_beta[i] +
|
||||
gxx[i] * betaxz[i] + gxy[i] * betayz[i] + gyz[i] * betayx[i]
|
||||
+ gzz[i] * betazx[i] - gxz[i] * betayy[i];
|
||||
}
|
||||
// Fused: inverse metric + Gamma constraint + Christoffel (3 loops -> 1)
|
||||
// 1ms //
|
||||
for(int i=0;i<all;i+=1){
|
||||
double det = (dxx[i] + ONE) * (dyy[i] + ONE) * (dzz[i] + ONE) + gxy[i] * gyz[i] * gxz[i] + gxz[i] * gxy[i] * gyz[i] -
|
||||
gxz[i] * (dyy[i] + ONE) * gxz[i] - gxy[i] * gxy[i] * (dzz[i] + ONE) - (dxx[i] + ONE) * gyz[i] * gyz[i];
|
||||
double lg_xx = ((dyy[i] + ONE) * (dzz[i] + ONE) - gyz[i] * gyz[i]) / det;
|
||||
double lg_xy = -(gxy[i] * (dzz[i] + ONE) - gyz[i] * gxz[i]) / det;
|
||||
double lg_xz = (gxy[i] * gyz[i] - (dyy[i] + ONE) * gxz[i]) / det;
|
||||
double lg_yy = ((dxx[i] + ONE) * (dzz[i] + ONE) - gxz[i] * gxz[i]) / det;
|
||||
double lg_yz = -((dxx[i] + ONE) * gyz[i] - gxy[i] * gxz[i]) / det;
|
||||
double lg_zz = ((dxx[i] + ONE) * (dyy[i] + ONE) - gxy[i] * gxy[i]) / det;
|
||||
gupxx[i] = lg_xx; gupxy[i] = lg_xy; gupxz[i] = lg_xz;
|
||||
gupyy[i] = lg_yy; gupyz[i] = lg_yz; gupzz[i] = lg_zz;
|
||||
|
||||
if(co==0){
|
||||
double det = gxx[i] * gyy[i] * gzz[i] + gxy[i] * gyz[i] * gxz[i] + gxz[i] * gxy[i] * gyz[i] -
|
||||
gxz[i] * gyy[i] * gxz[i] - gxy[i] * gxy[i] * gzz[i] - gxx[i] * gyz[i] * gyz[i];
|
||||
gupxx[i] = (gyy[i] * gzz[i] - gyz[i] * gyz[i]) / det;
|
||||
gupxy[i] = -(gxy[i] * gzz[i] - gyz[i] * gxz[i]) / det;
|
||||
gupxz[i] = (gxy[i] * gyz[i] - gyy[i] * gxz[i]) / det;
|
||||
gupyy[i] = (gxx[i] * gzz[i] - gxz[i] * gxz[i]) / det;
|
||||
gupyz[i] = -(gxx[i] * gyz[i] - gxy[i] * gxz[i]) / det;
|
||||
gupzz[i] = (gxx[i] * gyy[i] - gxy[i] * gxy[i]) / det;
|
||||
}
|
||||
// 2.2ms //
|
||||
if(co==0){
|
||||
for (int i=0;i<all;i+=1) {
|
||||
Gmx_Res[i] = Gamx[i] - (
|
||||
lg_xx * (lg_xx*gxxx[i] + lg_xy*gxyx[i] + lg_xz*gxzx[i]) +
|
||||
lg_xy * (lg_xx*gxyx[i] + lg_xy*gyyx[i] + lg_xz*gyzx[i]) +
|
||||
lg_xz * (lg_xx*gxzx[i] + lg_xy*gyzx[i] + lg_xz*gzzx[i]) +
|
||||
lg_xx * (lg_xy*gxxy[i] + lg_yy*gxyy[i] + lg_yz*gxzy[i]) +
|
||||
lg_xy * (lg_xy*gxyy[i] + lg_yy*gyyy[i] + lg_yz*gyzy[i]) +
|
||||
lg_xz * (lg_xy*gxzy[i] + lg_yy*gyzy[i] + lg_yz*gzzy[i]) +
|
||||
lg_xx * (lg_xz*gxxz[i] + lg_yz*gxyz[i] + lg_zz*gxzz[i]) +
|
||||
lg_xy * (lg_xz*gxyz[i] + lg_yz*gyyz[i] + lg_zz*gyzz[i]) +
|
||||
lg_xz * (lg_xz*gxzz[i] + lg_yz*gyzz[i] + lg_zz*gzzz[i])
|
||||
gupxx[i] * (gupxx[i]*gxxx[i] + gupxy[i]*gxyx[i] + gupxz[i]*gxzx[i]) +
|
||||
gupxy[i] * (gupxx[i]*gxyx[i] + gupxy[i]*gyyx[i] + gupxz[i]*gyzx[i]) +
|
||||
gupxz[i] * (gupxx[i]*gxzx[i] + gupxy[i]*gyzx[i] + gupxz[i]*gzzx[i]) +
|
||||
|
||||
gupxx[i] * (gupxy[i]*gxxy[i] + gupyy[i]*gxyy[i] + gupyz[i]*gxzy[i]) +
|
||||
gupxy[i] * (gupxy[i]*gxyy[i] + gupyy[i]*gyyy[i] + gupyz[i]*gyzy[i]) +
|
||||
gupxz[i] * (gupxy[i]*gxzy[i] + gupyy[i]*gyzy[i] + gupyz[i]*gzzy[i]) +
|
||||
|
||||
gupxx[i] * (gupxz[i]*gxxz[i] + gupyz[i]*gxyz[i] + gupzz[i]*gxzz[i]) +
|
||||
gupxy[i] * (gupxz[i]*gxyz[i] + gupyz[i]*gyyz[i] + gupzz[i]*gyzz[i]) +
|
||||
gupxz[i] * (gupxz[i]*gxzz[i] + gupyz[i]*gyzz[i] + gupzz[i]*gzzz[i])
|
||||
);
|
||||
|
||||
Gmy_Res[i] = Gamy[i] - (
|
||||
lg_xx * (lg_xy*gxxx[i] + lg_yy*gxyx[i] + lg_yz*gxzx[i]) +
|
||||
lg_xy * (lg_xy*gxyx[i] + lg_yy*gyyx[i] + lg_yz*gyzx[i]) +
|
||||
lg_xz * (lg_xy*gxzx[i] + lg_yy*gyzx[i] + lg_yz*gzzx[i]) +
|
||||
lg_xy * (lg_xy*gxxy[i] + lg_yy*gxyy[i] + lg_yz*gxzy[i]) +
|
||||
lg_yy * (lg_xy*gxyy[i] + lg_yy*gyyy[i] + lg_yz*gyzy[i]) +
|
||||
lg_yz * (lg_xy*gxzy[i] + lg_yy*gyzy[i] + lg_yz*gzzy[i]) +
|
||||
lg_xy * (lg_xz*gxxz[i] + lg_yz*gxyz[i] + lg_zz*gxzz[i]) +
|
||||
lg_yy * (lg_xz*gxyz[i] + lg_yz*gyyz[i] + lg_zz*gyzz[i]) +
|
||||
lg_yz * (lg_xz*gxzz[i] + lg_yz*gyzz[i] + lg_zz*gzzz[i])
|
||||
gupxx[i] * (gupxy[i]*gxxx[i] + gupyy[i]*gxyx[i] + gupyz[i]*gxzx[i]) +
|
||||
gupxy[i] * (gupxy[i]*gxyx[i] + gupyy[i]*gyyx[i] + gupyz[i]*gyzx[i]) +
|
||||
gupxz[i] * (gupxy[i]*gxzx[i] + gupyy[i]*gyzx[i] + gupyz[i]*gzzx[i]) +
|
||||
|
||||
gupxy[i] * (gupxy[i]*gxxy[i] + gupyy[i]*gxyy[i] + gupyz[i]*gxzy[i]) +
|
||||
gupyy[i] * (gupxy[i]*gxyy[i] + gupyy[i]*gyyy[i] + gupyz[i]*gyzy[i]) +
|
||||
gupyz[i] * (gupxy[i]*gxzy[i] + gupyy[i]*gyzy[i] + gupyz[i]*gzzy[i]) +
|
||||
|
||||
gupxy[i] * (gupxz[i]*gxxz[i] + gupyz[i]*gxyz[i] + gupzz[i]*gxzz[i]) +
|
||||
gupyy[i] * (gupxz[i]*gxyz[i] + gupyz[i]*gyyz[i] + gupzz[i]*gyzz[i]) +
|
||||
gupyz[i] * (gupxz[i]*gxzz[i] + gupyz[i]*gyzz[i] + gupzz[i]*gzzz[i])
|
||||
);
|
||||
|
||||
Gmz_Res[i] = Gamz[i] - (
|
||||
lg_xx * (lg_xz*gxxx[i] + lg_yz*gxyx[i] + lg_zz*gxzx[i]) +
|
||||
lg_xy * (lg_xz*gxyx[i] + lg_yz*gyyx[i] + lg_zz*gyzx[i]) +
|
||||
lg_xz * (lg_xz*gxzx[i] + lg_yz*gyzx[i] + lg_zz*gzzx[i]) +
|
||||
lg_xy * (lg_xz*gxxy[i] + lg_yz*gxyy[i] + lg_zz*gxzy[i]) +
|
||||
lg_yy * (lg_xz*gxyy[i] + lg_yz*gyyy[i] + lg_zz*gyzy[i]) +
|
||||
lg_yz * (lg_xz*gxzy[i] + lg_yz*gyzy[i] + lg_zz*gzzy[i]) +
|
||||
lg_xz * (lg_xz*gxxz[i] + lg_yz*gxyz[i] + lg_zz*gxzz[i]) +
|
||||
lg_yz * (lg_xz*gxyz[i] + lg_yz*gyyz[i] + lg_zz*gyzz[i]) +
|
||||
lg_zz * (lg_xz*gxzz[i] + lg_yz*gyzz[i] + lg_zz*gzzz[i])
|
||||
gupxx[i] * (gupxz[i]*gxxx[i] + gupyz[i]*gxyx[i] + gupzz[i]*gxzx[i]) +
|
||||
gupxy[i] * (gupxz[i]*gxyx[i] + gupyz[i]*gyyx[i] + gupzz[i]*gyzx[i]) +
|
||||
gupxz[i] * (gupxz[i]*gxzx[i] + gupyz[i]*gyzx[i] + gupzz[i]*gzzx[i]) +
|
||||
|
||||
gupxy[i] * (gupxz[i]*gxxy[i] + gupyz[i]*gxyy[i] + gupzz[i]*gxzy[i]) +
|
||||
gupyy[i] * (gupxz[i]*gxyy[i] + gupyz[i]*gyyy[i] + gupzz[i]*gyzy[i]) +
|
||||
gupyz[i] * (gupxz[i]*gxzy[i] + gupyz[i]*gyzy[i] + gupzz[i]*gzzy[i]) +
|
||||
|
||||
gupxz[i] * (gupxz[i]*gxxz[i] + gupyz[i]*gxyz[i] + gupzz[i]*gxzz[i]) +
|
||||
gupyz[i] * (gupxz[i]*gxyz[i] + gupyz[i]*gyyz[i] + gupzz[i]*gyzz[i]) +
|
||||
gupzz[i] * (gupxz[i]*gxzz[i] + gupyz[i]*gyzz[i] + gupzz[i]*gzzz[i])
|
||||
);
|
||||
}
|
||||
|
||||
Gamxxx[i] = HALF * ( lg_xx*gxxx[i]
|
||||
+ lg_xy*(TWO*gxyx[i] - gxxy[i])
|
||||
+ lg_xz*(TWO*gxzx[i] - gxxz[i]) );
|
||||
Gamyxx[i] = HALF * ( lg_xy*gxxx[i]
|
||||
+ lg_yy*(TWO*gxyx[i] - gxxy[i])
|
||||
+ lg_yz*(TWO*gxzx[i] - gxxz[i]) );
|
||||
Gamzxx[i] = HALF * ( lg_xz*gxxx[i]
|
||||
+ lg_yz*(TWO*gxyx[i] - gxxy[i])
|
||||
+ lg_zz*(TWO*gxzx[i] - gxxz[i]) );
|
||||
Gamxyy[i] = HALF * ( lg_xx*(TWO*gxyy[i] - gyyx[i])
|
||||
+ lg_xy*gyyy[i]
|
||||
+ lg_xz*(TWO*gyzy[i] - gyyz[i]) );
|
||||
Gamyyy[i] = HALF * ( lg_xy*(TWO*gxyy[i] - gyyx[i])
|
||||
+ lg_yy*gyyy[i]
|
||||
+ lg_yz*(TWO*gyzy[i] - gyyz[i]) );
|
||||
Gamzyy[i] = HALF * ( lg_xz*(TWO*gxyy[i] - gyyx[i])
|
||||
+ lg_yz*gyyy[i]
|
||||
+ lg_zz*(TWO*gyzy[i] - gyyz[i]) );
|
||||
Gamxzz[i] = HALF * ( lg_xx*(TWO*gxzz[i] - gzzx[i])
|
||||
+ lg_xy*(TWO*gyzz[i] - gzzy[i])
|
||||
+ lg_xz*gzzz[i] );
|
||||
Gamyzz[i] = HALF * ( lg_xy*(TWO*gxzz[i] - gzzx[i])
|
||||
+ lg_yy*(TWO*gyzz[i] - gzzy[i])
|
||||
+ lg_yz*gzzz[i] );
|
||||
Gamzzz[i] = HALF * ( lg_xz*(TWO*gxzz[i] - gzzx[i])
|
||||
+ lg_yz*(TWO*gyzz[i] - gzzy[i])
|
||||
+ lg_zz*gzzz[i] );
|
||||
Gamxxy[i] = HALF * ( lg_xx*gxxy[i]
|
||||
+ lg_xy*gyyx[i]
|
||||
+ lg_xz*(gxzy[i] + gyzx[i] - gxyz[i]) );
|
||||
Gamyxy[i] = HALF * ( lg_xy*gxxy[i]
|
||||
+ lg_yy*gyyx[i]
|
||||
+ lg_yz*(gxzy[i] + gyzx[i] - gxyz[i]) );
|
||||
Gamzxy[i] = HALF * ( lg_xz*gxxy[i]
|
||||
+ lg_yz*gyyx[i]
|
||||
+ lg_zz*(gxzy[i] + gyzx[i] - gxyz[i]) );
|
||||
Gamxxz[i] = HALF * ( lg_xx*gxxz[i]
|
||||
+ lg_xy*(gxyz[i] + gyzx[i] - gxzy[i])
|
||||
+ lg_xz*gzzx[i] );
|
||||
Gamyxz[i] = HALF * ( lg_xy*gxxz[i]
|
||||
+ lg_yy*(gxyz[i] + gyzx[i] - gxzy[i])
|
||||
+ lg_yz*gzzx[i] );
|
||||
Gamzxz[i] = HALF * ( lg_xz*gxxz[i]
|
||||
+ lg_yz*(gxyz[i] + gyzx[i] - gxzy[i])
|
||||
+ lg_zz*gzzx[i] );
|
||||
Gamxyz[i] = HALF * ( lg_xx*(gxyz[i] + gxzy[i] - gyzx[i])
|
||||
+ lg_xy*gyyz[i]
|
||||
+ lg_xz*gzzy[i] );
|
||||
Gamyyz[i] = HALF * ( lg_xy*(gxyz[i] + gxzy[i] - gyzx[i])
|
||||
+ lg_yy*gyyz[i]
|
||||
+ lg_yz*gzzy[i] );
|
||||
Gamzyz[i] = HALF * ( lg_xz*(gxyz[i] + gxzy[i] - gyzx[i])
|
||||
+ lg_yz*gyyz[i]
|
||||
+ lg_zz*gzzy[i] );
|
||||
}
|
||||
// Fused: A^{ij} raise-index + Gamma_rhs part 1 (2 loops -> 1)
|
||||
// 5ms //
|
||||
for (int i=0;i<all;i+=1) {
|
||||
double axx = gupxx[i]*gupxx[i]*Axx[i]
|
||||
|
||||
Gamxxx[i] = HALF * ( gupxx[i]*gxxx[i]
|
||||
+ gupxy[i]*(TWO*gxyx[i] - gxxy[i])
|
||||
+ gupxz[i]*(TWO*gxzx[i] - gxxz[i]) );
|
||||
|
||||
Gamyxx[i] = HALF * ( gupxy[i]*gxxx[i]
|
||||
+ gupyy[i]*(TWO*gxyx[i] - gxxy[i])
|
||||
+ gupyz[i]*(TWO*gxzx[i] - gxxz[i]) );
|
||||
|
||||
Gamzxx[i] = HALF * ( gupxz[i]*gxxx[i]
|
||||
+ gupyz[i]*(TWO*gxyx[i] - gxxy[i])
|
||||
+ gupzz[i]*(TWO*gxzx[i] - gxxz[i]) );
|
||||
|
||||
Gamxyy[i] = HALF * ( gupxx[i]*(TWO*gxyy[i] - gyyx[i])
|
||||
+ gupxy[i]*gyyy[i]
|
||||
+ gupxz[i]*(TWO*gyzy[i] - gyyz[i]) );
|
||||
|
||||
Gamyyy[i] = HALF * ( gupxy[i]*(TWO*gxyy[i] - gyyx[i])
|
||||
+ gupyy[i]*gyyy[i]
|
||||
+ gupyz[i]*(TWO*gyzy[i] - gyyz[i]) );
|
||||
|
||||
Gamzyy[i] = HALF * ( gupxz[i]*(TWO*gxyy[i] - gyyx[i])
|
||||
+ gupyz[i]*gyyy[i]
|
||||
+ gupzz[i]*(TWO*gyzy[i] - gyyz[i]) );
|
||||
|
||||
Gamxzz[i] = HALF * ( gupxx[i]*(TWO*gxzz[i] - gzzx[i])
|
||||
+ gupxy[i]*(TWO*gyzz[i] - gzzy[i])
|
||||
+ gupxz[i]*gzzz[i] );
|
||||
|
||||
Gamyzz[i] = HALF * ( gupxy[i]*(TWO*gxzz[i] - gzzx[i])
|
||||
+ gupyy[i]*(TWO*gyzz[i] - gzzy[i])
|
||||
+ gupyz[i]*gzzz[i] );
|
||||
|
||||
Gamzzz[i] = HALF * ( gupxz[i]*(TWO*gxzz[i] - gzzx[i])
|
||||
+ gupyz[i]*(TWO*gyzz[i] - gzzy[i])
|
||||
+ gupzz[i]*gzzz[i] );
|
||||
|
||||
Gamxxy[i] = HALF * ( gupxx[i]*gxxy[i]
|
||||
+ gupxy[i]*gyyx[i]
|
||||
+ gupxz[i]*(gxzy[i] + gyzx[i] - gxyz[i]) );
|
||||
|
||||
Gamyxy[i] = HALF * ( gupxy[i]*gxxy[i]
|
||||
+ gupyy[i]*gyyx[i]
|
||||
+ gupyz[i]*(gxzy[i] + gyzx[i] - gxyz[i]) );
|
||||
|
||||
Gamzxy[i] = HALF * ( gupxz[i]*gxxy[i]
|
||||
+ gupyz[i]*gyyx[i]
|
||||
+ gupzz[i]*(gxzy[i] + gyzx[i] - gxyz[i]) );
|
||||
|
||||
Gamxxz[i] = HALF * ( gupxx[i]*gxxz[i]
|
||||
+ gupxy[i]*(gxyz[i] + gyzx[i] - gxzy[i])
|
||||
+ gupxz[i]*gzzx[i] );
|
||||
|
||||
Gamyxz[i] = HALF * ( gupxy[i]*gxxz[i]
|
||||
+ gupyy[i]*(gxyz[i] + gyzx[i] - gxzy[i])
|
||||
+ gupyz[i]*gzzx[i] );
|
||||
|
||||
Gamzxz[i] = HALF * ( gupxz[i]*gxxz[i]
|
||||
+ gupyz[i]*(gxyz[i] + gyzx[i] - gxzy[i])
|
||||
+ gupzz[i]*gzzx[i] );
|
||||
|
||||
Gamxyz[i] = HALF * ( gupxx[i]*(gxyz[i] + gxzy[i] - gyzx[i])
|
||||
+ gupxy[i]*gyyz[i]
|
||||
+ gupxz[i]*gzzy[i] );
|
||||
|
||||
Gamyyz[i] = HALF * ( gupxy[i]*(gxyz[i] + gxzy[i] - gyzx[i])
|
||||
+ gupyy[i]*gyyz[i]
|
||||
+ gupyz[i]*gzzy[i] );
|
||||
|
||||
Gamzyz[i] = HALF * ( gupxz[i]*(gxyz[i] + gxzy[i] - gyzx[i])
|
||||
+ gupyz[i]*gyyz[i]
|
||||
+ gupzz[i]*gzzy[i] );
|
||||
|
||||
}
|
||||
// 1.8ms //
|
||||
for (int i=0;i<all;i+=1) {
|
||||
|
||||
Rxx[i] = gupxx[i]*gupxx[i]*Axx[i]
|
||||
+ gupxy[i]*gupxy[i]*Ayy[i]
|
||||
+ gupxz[i]*gupxz[i]*Azz[i]
|
||||
+ TWO * ( gupxx[i]*gupxy[i]*Axy[i]
|
||||
+ gupxx[i]*gupxz[i]*Axz[i]
|
||||
+ gupxy[i]*gupxz[i]*Ayz[i] );
|
||||
double ayy = gupxy[i]*gupxy[i]*Axx[i]
|
||||
|
||||
Ryy[i] = gupxy[i]*gupxy[i]*Axx[i]
|
||||
+ gupyy[i]*gupyy[i]*Ayy[i]
|
||||
+ gupyz[i]*gupyz[i]*Azz[i]
|
||||
+ TWO * ( gupxy[i]*gupyy[i]*Axy[i]
|
||||
+ gupxy[i]*gupyz[i]*Axz[i]
|
||||
+ gupyy[i]*gupyz[i]*Ayz[i] );
|
||||
double azz = gupxz[i]*gupxz[i]*Axx[i]
|
||||
|
||||
Rzz[i] = gupxz[i]*gupxz[i]*Axx[i]
|
||||
+ gupyz[i]*gupyz[i]*Ayy[i]
|
||||
+ gupzz[i]*gupzz[i]*Azz[i]
|
||||
+ TWO * ( gupxz[i]*gupyz[i]*Axy[i]
|
||||
+ gupxz[i]*gupzz[i]*Axz[i]
|
||||
+ gupyz[i]*gupzz[i]*Ayz[i] );
|
||||
double axy = gupxx[i]*gupxy[i]*Axx[i]
|
||||
|
||||
Rxy[i] = gupxx[i]*gupxy[i]*Axx[i]
|
||||
+ gupxy[i]*gupyy[i]*Ayy[i]
|
||||
+ gupxz[i]*gupyz[i]*Azz[i]
|
||||
+ ( gupxx[i]*gupyy[i] + gupxy[i]*gupxy[i] ) * Axy[i]
|
||||
+ ( gupxx[i]*gupyz[i] + gupxz[i]*gupxy[i] ) * Axz[i]
|
||||
+ ( gupxy[i]*gupyz[i] + gupxz[i]*gupyy[i] ) * Ayz[i];
|
||||
double axz = gupxx[i]*gupxz[i]*Axx[i]
|
||||
|
||||
Rxz[i] = gupxx[i]*gupxz[i]*Axx[i]
|
||||
+ gupxy[i]*gupyz[i]*Ayy[i]
|
||||
+ gupxz[i]*gupzz[i]*Azz[i]
|
||||
+ ( gupxx[i]*gupyz[i] + gupxy[i]*gupxz[i] ) * Axy[i]
|
||||
+ ( gupxx[i]*gupzz[i] + gupxz[i]*gupxz[i] ) * Axz[i]
|
||||
+ ( gupxy[i]*gupzz[i] + gupxz[i]*gupyz[i] ) * Ayz[i];
|
||||
double ayz = gupxy[i]*gupxz[i]*Axx[i]
|
||||
|
||||
Ryz[i] = gupxy[i]*gupxz[i]*Axx[i]
|
||||
+ gupyy[i]*gupyz[i]*Ayy[i]
|
||||
+ gupyz[i]*gupzz[i]*Azz[i]
|
||||
+ ( gupxy[i]*gupyz[i] + gupyy[i]*gupxz[i] ) * Axy[i]
|
||||
+ ( gupxy[i]*gupzz[i] + gupyz[i]*gupxz[i] ) * Axz[i]
|
||||
+ ( gupyy[i]*gupzz[i] + gupyz[i]*gupyz[i] ) * Ayz[i];
|
||||
Rxx[i] = axx; Ryy[i] = ayy; Rzz[i] = azz;
|
||||
Rxy[i] = axy; Rxz[i] = axz; Ryz[i] = ayz;
|
||||
}
|
||||
// 4ms //
|
||||
for(int i=0;i<all;i+=1){
|
||||
Gamx_rhs[i] = - TWO * ( Lapx[i] * Rxx[i] + Lapy[i] * Rxy[i] + Lapz[i] * Rxz[i] ) +
|
||||
TWO * alpn1[i] * (
|
||||
-F3o2/chin1[i] * ( chix[i] * Rxx[i] + chiy[i] * Rxy[i] + chiz[i] * Rxz[i] ) -
|
||||
gupxx[i] * ( F2o3 * Kx[i] + EIGHT * PI * Sx[i] ) -
|
||||
gupxy[i] * ( F2o3 * Ky[i] + EIGHT * PI * Sy[i] ) -
|
||||
gupxz[i] * ( F2o3 * Kz[i] + EIGHT * PI * Sz[i] ) +
|
||||
Gamxxx[i] * Rxx[i] + Gamxyy[i] * Ryy[i] + Gamxzz[i] * Rzz[i] +
|
||||
TWO * ( Gamxxy[i] * Rxy[i] + Gamxxz[i] * Rxz[i] + Gamxyz[i] * Ryz[i] ) );
|
||||
|
||||
Gamx_rhs[i] = - TWO * ( Lapx[i]*axx + Lapy[i]*axy + Lapz[i]*axz ) +
|
||||
TWO * alpn1[i] * (
|
||||
-F3o2/chin1[i] * ( chix[i]*axx + chiy[i]*axy + chiz[i]*axz ) -
|
||||
gupxx[i] * ( F2o3*Kx[i] + EIGHT*PI*Sx[i] ) -
|
||||
gupxy[i] * ( F2o3*Ky[i] + EIGHT*PI*Sy[i] ) -
|
||||
gupxz[i] * ( F2o3*Kz[i] + EIGHT*PI*Sz[i] ) +
|
||||
Gamxxx[i]*axx + Gamxyy[i]*ayy + Gamxzz[i]*azz +
|
||||
TWO * ( Gamxxy[i]*axy + Gamxxz[i]*axz + Gamxyz[i]*ayz ) );
|
||||
|
||||
Gamy_rhs[i] = -TWO * ( Lapx[i]*axy + Lapy[i]*ayy + Lapz[i]*ayz )
|
||||
Gamy_rhs[i] = -TWO * ( Lapx[i]*Rxy[i] + Lapy[i]*Ryy[i] + Lapz[i]*Ryz[i] )
|
||||
+ TWO * alpn1[i] * (
|
||||
-F3o2/chin1[i] * ( chix[i]*axy + chiy[i]*ayy + chiz[i]*ayz )
|
||||
-F3o2/chin1[i] * ( chix[i]*Rxy[i] + chiy[i]*Ryy[i] + chiz[i]*Ryz[i] )
|
||||
- gupxy[i] * ( F2o3*Kx[i] + EIGHT*PI*Sx[i] )
|
||||
- gupyy[i] * ( F2o3*Ky[i] + EIGHT*PI*Sy[i] )
|
||||
- gupyz[i] * ( F2o3*Kz[i] + EIGHT*PI*Sz[i] )
|
||||
+ Gamyxx[i]*axx + Gamyyy[i]*ayy + Gamyzz[i]*azz
|
||||
+ TWO * ( Gamyxy[i]*axy + Gamyxz[i]*axz + Gamyyz[i]*ayz )
|
||||
+ Gamyxx[i]*Rxx[i] + Gamyyy[i]*Ryy[i] + Gamyzz[i]*Rzz[i]
|
||||
+ TWO * ( Gamyxy[i]*Rxy[i] + Gamyxz[i]*Rxz[i] + Gamyyz[i]*Ryz[i] )
|
||||
);
|
||||
|
||||
Gamz_rhs[i] = -TWO * ( Lapx[i]*axz + Lapy[i]*ayz + Lapz[i]*azz )
|
||||
Gamz_rhs[i] = -TWO * ( Lapx[i]*Rxz[i] + Lapy[i]*Ryz[i] + Lapz[i]*Rzz[i] )
|
||||
+ TWO * alpn1[i] * (
|
||||
-F3o2/chin1[i] * ( chix[i]*axz + chiy[i]*ayz + chiz[i]*azz )
|
||||
-F3o2/chin1[i] * ( chix[i]*Rxz[i] + chiy[i]*Ryz[i] + chiz[i]*Rzz[i] )
|
||||
- gupxz[i] * ( F2o3*Kx[i] + EIGHT*PI*Sx[i] )
|
||||
- gupyz[i] * ( F2o3*Ky[i] + EIGHT*PI*Sy[i] )
|
||||
- gupzz[i] * ( F2o3*Kz[i] + EIGHT*PI*Sz[i] )
|
||||
+ Gamzxx[i]*axx + Gamzyy[i]*ayy + Gamzzz[i]*azz
|
||||
+ TWO * ( Gamzxy[i]*axy + Gamzxz[i]*axz + Gamzyz[i]*ayz )
|
||||
+ Gamzxx[i]*Rxx[i] + Gamzyy[i]*Ryy[i] + Gamzzz[i]*Rzz[i]
|
||||
+ TWO * ( Gamzxy[i]*Rxy[i] + Gamzxz[i]*Rxz[i] + Gamzyz[i]*Ryz[i] )
|
||||
);
|
||||
}
|
||||
// 22.3ms //
|
||||
@@ -326,63 +365,65 @@ int f_compute_rhs_bssn(int *ex, double &T,
|
||||
fderivs(ex,Gamy,Gamyx,Gamyy,Gamyz,X,Y,Z,SYM ,ANTI,SYM ,Symmetry,Lev);
|
||||
fderivs(ex,Gamz,Gamzx,Gamzy,Gamzz,X,Y,Z,SYM ,SYM ,ANTI,Symmetry,Lev);
|
||||
|
||||
// Fused: fxx/Gamxa + Gamma_rhs part 2 (2 loops -> 1)
|
||||
// 3.5ms //
|
||||
for(int i=0;i<all;i+=1){
|
||||
const double divb = betaxx[i] + betayy[i] + betazz[i];
|
||||
double lfxx = gxxx[i] + gxyy[i] + gxzz[i];
|
||||
double lfxy = gxyx[i] + gyyy[i] + gyzz[i];
|
||||
double lfxz = gxzx[i] + gyzy[i] + gzzz[i];
|
||||
fxx[i] = lfxx; fxy[i] = lfxy; fxz[i] = lfxz;
|
||||
|
||||
double gxa = gupxx[i]*Gamxxx[i] + gupyy[i]*Gamxyy[i] + gupzz[i]*Gamxzz[i]
|
||||
fxx[i] = gxxx[i] + gxyy[i] + gxzz[i];
|
||||
fxy[i] = gxyx[i] + gyyy[i] + gyzz[i];
|
||||
fxz[i] = gxzx[i] + gyzy[i] + gzzz[i];
|
||||
Gamxa[i] = gupxx[i]*Gamxxx[i] + gupyy[i]*Gamxyy[i] + gupzz[i]*Gamxzz[i]
|
||||
+ TWO * ( gupxy[i]*Gamxxy[i] + gupxz[i]*Gamxxz[i] + gupyz[i]*Gamxyz[i] );
|
||||
double gya = gupxx[i]*Gamyxx[i] + gupyy[i]*Gamyyy[i] + gupzz[i]*Gamyzz[i]
|
||||
|
||||
Gamya[i] = gupxx[i]*Gamyxx[i] + gupyy[i]*Gamyyy[i] + gupzz[i]*Gamyzz[i]
|
||||
+ TWO * ( gupxy[i]*Gamyxy[i] + gupxz[i]*Gamyxz[i] + gupyz[i]*Gamyyz[i] );
|
||||
double gza = gupxx[i]*Gamzxx[i] + gupyy[i]*Gamzyy[i] + gupzz[i]*Gamzzz[i]
|
||||
|
||||
Gamza[i] = gupxx[i]*Gamzxx[i] + gupyy[i]*Gamzyy[i] + gupzz[i]*Gamzzz[i]
|
||||
+ TWO * ( gupxy[i]*Gamzxy[i] + gupxz[i]*Gamzxz[i] + gupyz[i]*Gamzyz[i] );
|
||||
}
|
||||
// 3.9ms //
|
||||
for(int i=0;i<all;i+=1){
|
||||
Gamx_rhs[i] = Gamx_rhs[i]
|
||||
+ F2o3 * gxa * divb
|
||||
- gxa * betaxx[i] - gya * betaxy[i] - gza * betaxz[i]
|
||||
+ F1o3 * ( gupxx[i] * lfxx + gupxy[i] * lfxy + gupxz[i] * lfxz )
|
||||
+ F2o3 * Gamxa[i] * div_beta[i]
|
||||
- Gamxa[i] * betaxx[i] - Gamya[i] * betaxy[i] - Gamza[i] * betaxz[i]
|
||||
+ F1o3 * ( gupxx[i] * fxx[i] + gupxy[i] * fxy[i] + gupxz[i] * fxz[i] )
|
||||
+ gupxx[i] * gxxx[i] + gupyy[i] * gyyx[i] + gupzz[i] * gzzx[i]
|
||||
+ TWO * ( gupxy[i] * gxyx[i] + gupxz[i] * gxzx[i] + gupyz[i] * gyzx[i] );
|
||||
|
||||
Gamy_rhs[i] = Gamy_rhs[i]
|
||||
+ F2o3 * gya * divb
|
||||
- gxa * betayx[i] - gya * betayy[i] - gza * betayz[i]
|
||||
+ F1o3 * ( gupxy[i] * lfxx + gupyy[i] * lfxy + gupyz[i] * lfxz )
|
||||
+ F2o3 * Gamya[i] * div_beta[i]
|
||||
- Gamxa[i] * betayx[i] - Gamya[i] * betayy[i] - Gamza[i] * betayz[i]
|
||||
+ F1o3 * ( gupxy[i] * fxx[i] + gupyy[i] * fxy[i] + gupyz[i] * fxz[i] )
|
||||
+ gupxx[i] * gxxy[i] + gupyy[i] * gyyy[i] + gupzz[i] * gzzy[i]
|
||||
+ TWO * ( gupxy[i] * gxyy[i] + gupxz[i] * gxzy[i] + gupyz[i] * gyzy[i] );
|
||||
|
||||
Gamz_rhs[i] = Gamz_rhs[i]
|
||||
+ F2o3 * gza * divb
|
||||
- gxa * betazx[i] - gya * betazy[i] - gza * betazz[i]
|
||||
+ F1o3 * ( gupxz[i] * lfxx + gupyz[i] * lfxy + gupzz[i] * lfxz )
|
||||
+ F2o3 * Gamza[i] * div_beta[i]
|
||||
- Gamxa[i] * betazx[i] - Gamya[i] * betazy[i] - Gamza[i] * betazz[i]
|
||||
+ F1o3 * ( gupxz[i] * fxx[i] + gupyz[i] * fxy[i] + gupzz[i] * fxz[i] )
|
||||
+ gupxx[i] * gxxz[i] + gupyy[i] * gyyz[i] + gupzz[i] * gzzz[i]
|
||||
+ TWO * ( gupxy[i] * gxyz[i] + gupxz[i] * gxzz[i] + gupyz[i] * gyzz[i] );
|
||||
}
|
||||
// 4.4ms //
|
||||
for (int i=0;i<all;i+=1) {
|
||||
gxxx[i] = (dxx[i] + ONE)*Gamxxx[i] + gxy[i]*Gamyxx[i] + gxz[i]*Gamzxx[i];
|
||||
gxyx[i] = (dxx[i] + ONE)*Gamxxy[i] + gxy[i]*Gamyxy[i] + gxz[i]*Gamzxy[i];
|
||||
gxzx[i] = (dxx[i] + ONE)*Gamxxz[i] + gxy[i]*Gamyxz[i] + gxz[i]*Gamzxz[i];
|
||||
gyyx[i] = (dxx[i] + ONE)*Gamxyy[i] + gxy[i]*Gamyyy[i] + gxz[i]*Gamzyy[i];
|
||||
gyzx[i] = (dxx[i] + ONE)*Gamxyz[i] + gxy[i]*Gamyyz[i] + gxz[i]*Gamzyz[i];
|
||||
gzzx[i] = (dxx[i] + ONE)*Gamxzz[i] + gxy[i]*Gamyzz[i] + gxz[i]*Gamzzz[i];
|
||||
gxxx[i] = gxx[i]*Gamxxx[i] + gxy[i]*Gamyxx[i] + gxz[i]*Gamzxx[i];
|
||||
gxyx[i] = gxx[i]*Gamxxy[i] + gxy[i]*Gamyxy[i] + gxz[i]*Gamzxy[i];
|
||||
gxzx[i] = gxx[i]*Gamxxz[i] + gxy[i]*Gamyxz[i] + gxz[i]*Gamzxz[i];
|
||||
gyyx[i] = gxx[i]*Gamxyy[i] + gxy[i]*Gamyyy[i] + gxz[i]*Gamzyy[i];
|
||||
gyzx[i] = gxx[i]*Gamxyz[i] + gxy[i]*Gamyyz[i] + gxz[i]*Gamzyz[i];
|
||||
gzzx[i] = gxx[i]*Gamxzz[i] + gxy[i]*Gamyzz[i] + gxz[i]*Gamzzz[i];
|
||||
|
||||
gxxy[i] = gxy[i]*Gamxxx[i] + (dyy[i] + ONE)*Gamyxx[i] + gyz[i]*Gamzxx[i];
|
||||
gxyy[i] = gxy[i]*Gamxxy[i] + (dyy[i] + ONE)*Gamyxy[i] + gyz[i]*Gamzxy[i];
|
||||
gxzy[i] = gxy[i]*Gamxxz[i] + (dyy[i] + ONE)*Gamyxz[i] + gyz[i]*Gamzxz[i];
|
||||
gyyy[i] = gxy[i]*Gamxyy[i] + (dyy[i] + ONE)*Gamyyy[i] + gyz[i]*Gamzyy[i];
|
||||
gyzy[i] = gxy[i]*Gamxyz[i] + (dyy[i] + ONE)*Gamyyz[i] + gyz[i]*Gamzyz[i];
|
||||
gzzy[i] = gxy[i]*Gamxzz[i] + (dyy[i] + ONE)*Gamyzz[i] + gyz[i]*Gamzzz[i];
|
||||
gxxy[i] = gxy[i]*Gamxxx[i] + gyy[i]*Gamyxx[i] + gyz[i]*Gamzxx[i];
|
||||
gxyy[i] = gxy[i]*Gamxxy[i] + gyy[i]*Gamyxy[i] + gyz[i]*Gamzxy[i];
|
||||
gxzy[i] = gxy[i]*Gamxxz[i] + gyy[i]*Gamyxz[i] + gyz[i]*Gamzxz[i];
|
||||
gyyy[i] = gxy[i]*Gamxyy[i] + gyy[i]*Gamyyy[i] + gyz[i]*Gamzyy[i];
|
||||
gyzy[i] = gxy[i]*Gamxyz[i] + gyy[i]*Gamyyz[i] + gyz[i]*Gamzyz[i];
|
||||
gzzy[i] = gxy[i]*Gamxzz[i] + gyy[i]*Gamyzz[i] + gyz[i]*Gamzzz[i];
|
||||
|
||||
gxxz[i] = gxz[i]*Gamxxx[i] + gyz[i]*Gamyxx[i] + (dzz[i] + ONE)*Gamzxx[i];
|
||||
gxyz[i] = gxz[i]*Gamxxy[i] + gyz[i]*Gamyxy[i] + (dzz[i] + ONE)*Gamzxy[i];
|
||||
gxzz[i] = gxz[i]*Gamxxz[i] + gyz[i]*Gamyxz[i] + (dzz[i] + ONE)*Gamzxz[i];
|
||||
gyyz[i] = gxz[i]*Gamxyy[i] + gyz[i]*Gamyyy[i] + (dzz[i] + ONE)*Gamzyy[i];
|
||||
gyzz[i] = gxz[i]*Gamxyz[i] + gyz[i]*Gamyyz[i] + (dzz[i] + ONE)*Gamzyz[i];
|
||||
gzzz[i] = gxz[i]*Gamxzz[i] + gyz[i]*Gamyzz[i] + (dzz[i] + ONE)*Gamzzz[i];
|
||||
gxxz[i] = gxz[i]*Gamxxx[i] + gyz[i]*Gamyxx[i] + gzz[i]*Gamzxx[i];
|
||||
gxyz[i] = gxz[i]*Gamxxy[i] + gyz[i]*Gamyxy[i] + gzz[i]*Gamzxy[i];
|
||||
gxzz[i] = gxz[i]*Gamxxz[i] + gyz[i]*Gamyxz[i] + gzz[i]*Gamzxz[i];
|
||||
gyyz[i] = gxz[i]*Gamxyy[i] + gyz[i]*Gamyyy[i] + gzz[i]*Gamzyy[i];
|
||||
gyzz[i] = gxz[i]*Gamxyz[i] + gyz[i]*Gamyyz[i] + gzz[i]*Gamzyz[i];
|
||||
gzzz[i] = gxz[i]*Gamxzz[i] + gyz[i]*Gamyzz[i] + gzz[i]*Gamzzz[i];
|
||||
}
|
||||
// 22.2ms //
|
||||
fdderivs(ex,dxx,fxx,fxy,fxz,fyy,fyz,fzz,X,Y,Z,SYM ,SYM ,SYM ,Symmetry,Lev);
|
||||
@@ -430,17 +471,10 @@ int f_compute_rhs_bssn(int *ex, double &T,
|
||||
// 14ms //
|
||||
/* 假设 all = ex1*ex2*ex3,所有量都是 length=all 的 double 数组(已按同一扁平化规则排布) */
|
||||
for (int i = 0; i < all; i += 1) {
|
||||
const double gxa = gupxx[i]*Gamxxx[i] + gupyy[i]*Gamxyy[i] + gupzz[i]*Gamxzz[i]
|
||||
+ TWO * ( gupxy[i]*Gamxxy[i] + gupxz[i]*Gamxxz[i] + gupyz[i]*Gamxyz[i] );
|
||||
const double gya = gupxx[i]*Gamyxx[i] + gupyy[i]*Gamyyy[i] + gupzz[i]*Gamyzz[i]
|
||||
+ TWO * ( gupxy[i]*Gamyxy[i] + gupxz[i]*Gamyxz[i] + gupyz[i]*Gamyyz[i] );
|
||||
const double gza = gupxx[i]*Gamzxx[i] + gupyy[i]*Gamzyy[i] + gupzz[i]*Gamzzz[i]
|
||||
+ TWO * ( gupxy[i]*Gamzxy[i] + gupxz[i]*Gamzxz[i] + gupyz[i]*Gamzyz[i] );
|
||||
|
||||
Rxx[i] =
|
||||
-HALF * Rxx[i]
|
||||
+ (dxx[i] + ONE) * Gamxx[i] + gxy[i] * Gamyx[i] + gxz[i] * Gamzx[i]
|
||||
+ gxa * gxxx[i] + gya * gxyx[i] + gza * gxzx[i]
|
||||
+ gxx[i] * Gamxx[i] + gxy[i] * Gamyx[i] + gxz[i] * Gamzx[i]
|
||||
+ Gamxa[i] * gxxx[i] + Gamya[i] * gxyx[i] + Gamza[i] * gxzx[i]
|
||||
+ gupxx[i] * (
|
||||
TWO * (Gamxxx[i] * gxxx[i] + Gamyxx[i] * gxyx[i] + Gamzxx[i] * gxzx[i]) +
|
||||
(Gamxxx[i] * gxxx[i] + Gamyxx[i] * gxxy[i] + Gamzxx[i] * gxxz[i])
|
||||
@@ -474,8 +508,8 @@ int f_compute_rhs_bssn(int *ex, double &T,
|
||||
|
||||
Ryy[i] =
|
||||
-HALF * Ryy[i]
|
||||
+ gxy[i] * Gamxy[i] + (dyy[i] + ONE) * Gamyy[i] + gyz[i] * Gamzy[i]
|
||||
+ gxa * gxyy[i] + gya * gyyy[i] + gza * gyzy[i]
|
||||
+ gxy[i] * Gamxy[i] + gyy[i] * Gamyy[i] + gyz[i] * Gamzy[i]
|
||||
+ Gamxa[i] * gxyy[i] + Gamya[i] * gyyy[i] + Gamza[i] * gyzy[i]
|
||||
+ gupxx[i] * (
|
||||
TWO * (Gamxxy[i] * gxxy[i] + Gamyxy[i] * gxyy[i] + Gamzxy[i] * gxzy[i]) +
|
||||
(Gamxxy[i] * gxyx[i] + Gamyxy[i] * gxyy[i] + Gamzxy[i] * gxyz[i])
|
||||
@@ -509,8 +543,8 @@ int f_compute_rhs_bssn(int *ex, double &T,
|
||||
|
||||
Rzz[i] =
|
||||
-HALF * Rzz[i]
|
||||
+ gxz[i] * Gamxz[i] + gyz[i] * Gamyz[i] + (dzz[i] + ONE) * Gamzz[i]
|
||||
+ gxa * gxzz[i] + gya * gyzz[i] + gza * gzzz[i]
|
||||
+ gxz[i] * Gamxz[i] + gyz[i] * Gamyz[i] + gzz[i] * Gamzz[i]
|
||||
+ Gamxa[i] * gxzz[i] + Gamya[i] * gyzz[i] + Gamza[i] * gzzz[i]
|
||||
+ gupxx[i] * (
|
||||
TWO * (Gamxxz[i] * gxxz[i] + Gamyxz[i] * gxyz[i] + Gamzxz[i] * gxzz[i]) +
|
||||
(Gamxxz[i] * gxzx[i] + Gamyxz[i] * gxzy[i] + Gamzxz[i] * gxzz[i])
|
||||
@@ -545,10 +579,10 @@ int f_compute_rhs_bssn(int *ex, double &T,
|
||||
Rxy[i] =
|
||||
HALF * (
|
||||
-Rxy[i]
|
||||
+ (dxx[i] + ONE) * Gamxy[i] + gxy[i] * Gamyy[i] + gxz[i] * Gamzy[i]
|
||||
+ gxy[i] * Gamxx[i] + (dyy[i] + ONE) * Gamyx[i] + gyz[i] * Gamzx[i]
|
||||
+ gxa * gxyx[i] + gya * gyyx[i] + gza * gyzx[i]
|
||||
+ gxa * gxxy[i] + gya * gxyy[i] + gza * gxzy[i]
|
||||
+ gxx[i] * Gamxy[i] + gxy[i] * Gamyy[i] + gxz[i] * Gamzy[i]
|
||||
+ gxy[i] * Gamxx[i] + gyy[i] * Gamyx[i] + gyz[i] * Gamzx[i]
|
||||
+ Gamxa[i] * gxyx[i] + Gamya[i] * gyyx[i] + Gamza[i] * gyzx[i]
|
||||
+ Gamxa[i] * gxxy[i] + Gamya[i] * gxyy[i] + Gamza[i] * gxzy[i]
|
||||
)
|
||||
+ gupxx[i] * (
|
||||
Gamxxx[i] * gxxy[i] + Gamyxx[i] * gxyy[i] + Gamzxx[i] * gxzy[i]
|
||||
@@ -593,10 +627,10 @@ int f_compute_rhs_bssn(int *ex, double &T,
|
||||
Rxz[i] =
|
||||
HALF * (
|
||||
-Rxz[i]
|
||||
+ (dxx[i] + ONE) * Gamxz[i] + gxy[i] * Gamyz[i] + gxz[i] * Gamzz[i]
|
||||
+ gxz[i] * Gamxx[i] + gyz[i] * Gamyx[i] + (dzz[i] + ONE) * Gamzx[i]
|
||||
+ gxa * gxzx[i] + gya * gyzx[i] + gza * gzzx[i]
|
||||
+ gxa * gxxz[i] + gya * gxyz[i] + gza * gxzz[i]
|
||||
+ gxx[i] * Gamxz[i] + gxy[i] * Gamyz[i] + gxz[i] * Gamzz[i]
|
||||
+ gxz[i] * Gamxx[i] + gyz[i] * Gamyx[i] + gzz[i] * Gamzx[i]
|
||||
+ Gamxa[i] * gxzx[i] + Gamya[i] * gyzx[i] + Gamza[i] * gzzx[i]
|
||||
+ Gamxa[i] * gxxz[i] + Gamya[i] * gxyz[i] + Gamza[i] * gxzz[i]
|
||||
)
|
||||
+ gupxx[i] * (
|
||||
Gamxxx[i] * gxxz[i] + Gamyxx[i] * gxyz[i] + Gamzxx[i] * gxzz[i]
|
||||
@@ -641,10 +675,10 @@ int f_compute_rhs_bssn(int *ex, double &T,
|
||||
Ryz[i] =
|
||||
HALF * (
|
||||
-Ryz[i]
|
||||
+ gxy[i] * Gamxz[i] + (dyy[i] + ONE) * Gamyz[i] + gyz[i] * Gamzz[i]
|
||||
+ gxz[i] * Gamxy[i] + gyz[i] * Gamyy[i] + (dzz[i] + ONE) * Gamzy[i]
|
||||
+ gxa * gxzy[i] + gya * gyzy[i] + gza * gzzy[i]
|
||||
+ gxa * gxyz[i] + gya * gyyz[i] + gza * gyzz[i]
|
||||
+ gxy[i] * Gamxz[i] + gyy[i] * Gamyz[i] + gyz[i] * Gamzz[i]
|
||||
+ gxz[i] * Gamxy[i] + gyz[i] * Gamyy[i] + gzz[i] * Gamzy[i]
|
||||
+ Gamxa[i] * gxzy[i] + Gamya[i] * gyzy[i] + Gamza[i] * gzzy[i]
|
||||
+ Gamxa[i] * gxyz[i] + Gamya[i] * gyyz[i] + Gamza[i] * gyzz[i]
|
||||
)
|
||||
+ gupxx[i] * (
|
||||
Gamxxy[i] * gxxz[i] + Gamyxy[i] * gxyz[i] + Gamzxy[i] * gxzz[i]
|
||||
@@ -705,9 +739,9 @@ int f_compute_rhs_bssn(int *ex, double &T,
|
||||
+ TWO * gupxy[i] * (fxy[i] - (F3o2 / chin1[i]) * chix[i] * chiy[i])
|
||||
+ TWO * gupxz[i] * (fxz[i] - (F3o2 / chin1[i]) * chix[i] * chiz[i])
|
||||
+ TWO * gupyz[i] * (fyz[i] - (F3o2 / chin1[i]) * chiy[i] * chiz[i]);
|
||||
Rxx[i] = Rxx[i] + ( fxx[i] - (chix[i] * chix[i]) / (chin1[i] * TWO) + (dxx[i] + ONE) * f[i] ) / (chin1[i] * TWO);
|
||||
Ryy[i] = Ryy[i] + ( fyy[i] - (chiy[i] * chiy[i]) / (chin1[i] * TWO) + (dyy[i] + ONE) * f[i] ) / (chin1[i] * TWO);
|
||||
Rzz[i] = Rzz[i] + ( fzz[i] - (chiz[i] * chiz[i]) / (chin1[i] * TWO) + (dzz[i] + ONE) * f[i] ) / (chin1[i] * TWO);
|
||||
Rxx[i] = Rxx[i] + ( fxx[i] - (chix[i] * chix[i]) / (chin1[i] * TWO) + gxx[i] * f[i] ) / (chin1[i] * TWO);
|
||||
Ryy[i] = Ryy[i] + ( fyy[i] - (chiy[i] * chiy[i]) / (chin1[i] * TWO) + gyy[i] * f[i] ) / (chin1[i] * TWO);
|
||||
Rzz[i] = Rzz[i] + ( fzz[i] - (chiz[i] * chiz[i]) / (chin1[i] * TWO) + gzz[i] * f[i] ) / (chin1[i] * TWO);
|
||||
|
||||
Rxy[i] = Rxy[i] + ( fxy[i] - (chix[i] * chiy[i]) / (chin1[i] * TWO) + gxy[i] * f[i] ) / (chin1[i] * TWO);
|
||||
Rxz[i] = Rxz[i] + ( fxz[i] - (chix[i] * chiz[i]) / (chin1[i] * TWO) + gxz[i] * f[i] ) / (chin1[i] * TWO);
|
||||
@@ -726,17 +760,17 @@ int f_compute_rhs_bssn(int *ex, double &T,
|
||||
gxxz[i] = (gupxz[i] * chix[i] + gupyz[i] * chiy[i] + gupzz[i] * chiz[i]) / chin1[i];
|
||||
|
||||
/* Christoffel 修正项 */
|
||||
Gamxxx[i] = Gamxxx[i] - ( ((chix[i] + chix[i]) / chin1[i]) - (dxx[i] + ONE) * gxxx[i] ) * HALF;
|
||||
Gamyxx[i] = Gamyxx[i] - ( 0.0 - (dxx[i] + ONE) * gxxy[i] ) * HALF; /* 原式只有 -gxx*gxxy */
|
||||
Gamzxx[i] = Gamzxx[i] - ( 0.0 - (dxx[i] + ONE) * gxxz[i] ) * HALF;
|
||||
Gamxxx[i] = Gamxxx[i] - ( ((chix[i] + chix[i]) / chin1[i]) - gxx[i] * gxxx[i] ) * HALF;
|
||||
Gamyxx[i] = Gamyxx[i] - ( 0.0 - gxx[i] * gxxy[i] ) * HALF; /* 原式只有 -gxx*gxxy */
|
||||
Gamzxx[i] = Gamzxx[i] - ( 0.0 - gxx[i] * gxxz[i] ) * HALF;
|
||||
|
||||
Gamxyy[i] = Gamxyy[i] - ( 0.0 - (dyy[i] + ONE) * gxxx[i] ) * HALF;
|
||||
Gamyyy[i] = Gamyyy[i] - ( ((chiy[i] + chiy[i]) / chin1[i]) - (dyy[i] + ONE) * gxxy[i] ) * HALF;
|
||||
Gamzyy[i] = Gamzyy[i] - ( 0.0 - (dyy[i] + ONE) * gxxz[i] ) * HALF;
|
||||
Gamxyy[i] = Gamxyy[i] - ( 0.0 - gyy[i] * gxxx[i] ) * HALF;
|
||||
Gamyyy[i] = Gamyyy[i] - ( ((chiy[i] + chiy[i]) / chin1[i]) - gyy[i] * gxxy[i] ) * HALF;
|
||||
Gamzyy[i] = Gamzyy[i] - ( 0.0 - gyy[i] * gxxz[i] ) * HALF;
|
||||
|
||||
Gamxzz[i] = Gamxzz[i] - ( 0.0 - (dzz[i] + ONE) * gxxx[i] ) * HALF;
|
||||
Gamyzz[i] = Gamyzz[i] - ( 0.0 - (dzz[i] + ONE) * gxxy[i] ) * HALF;
|
||||
Gamzzz[i] = Gamzzz[i] - ( ((chiz[i] + chiz[i]) / chin1[i]) - (dzz[i] + ONE) * gxxz[i] ) * HALF;
|
||||
Gamxzz[i] = Gamxzz[i] - ( 0.0 - gzz[i] * gxxx[i] ) * HALF;
|
||||
Gamyzz[i] = Gamyzz[i] - ( 0.0 - gzz[i] * gxxy[i] ) * HALF;
|
||||
Gamzzz[i] = Gamzzz[i] - ( ((chiz[i] + chiz[i]) / chin1[i]) - gzz[i] * gxxz[i] ) * HALF;
|
||||
|
||||
Gamxxy[i] = Gamxxy[i] - ( ( chiy[i] / chin1[i]) - gxy[i] * gxxx[i] ) * HALF;
|
||||
Gamyxy[i] = Gamyxy[i] - ( ( chix[i] / chin1[i]) - gxy[i] * gxxy[i] ) * HALF;
|
||||
@@ -758,13 +792,14 @@ int f_compute_rhs_bssn(int *ex, double &T,
|
||||
fxy[i] = fxy[i] - Gamxxy[i] * Lapx[i] - Gamyxy[i] * Lapy[i] - Gamzxy[i] * Lapz[i];
|
||||
fxz[i] = fxz[i] - Gamxxz[i] * Lapx[i] - Gamyxz[i] * Lapy[i] - Gamzxz[i] * Lapz[i];
|
||||
fyz[i] = fyz[i] - Gamxyz[i] * Lapx[i] - Gamyyz[i] * Lapy[i] - Gamzyz[i] * Lapz[i];
|
||||
|
||||
}
|
||||
// 1ms //
|
||||
for (int i=0;i<all;i+=1) {
|
||||
trK_rhs[i] = gupxx[i] * fxx[i] + gupyy[i] * fyy[i] + gupzz[i] * fzz[i]
|
||||
+ TWO * ( gupxy[i] * fxy[i] + gupxz[i] * fxz[i] + gupyz[i] * fyz[i] );
|
||||
}
|
||||
// 2.5ms //
|
||||
for (int i=0;i<all;i+=1) {
|
||||
const double divb = betaxx[i] + betayy[i] + betazz[i];
|
||||
|
||||
S[i] = chin1[i] * (
|
||||
gupxx[i] * Sxx[i] + gupyy[i] * Syy[i] + gupzz[i] * Szz[i]
|
||||
@@ -815,20 +850,23 @@ int f_compute_rhs_bssn(int *ex, double &T,
|
||||
+ (alpn1[i] / chin1[i]) * f[i]
|
||||
);
|
||||
|
||||
double l_fxx = alpn1[i] * (Rxx[i] - EIGHT * PI * Sxx[i]) - fxx[i];
|
||||
double l_fxy = alpn1[i] * (Rxy[i] - EIGHT * PI * Sxy[i]) - fxy[i];
|
||||
double l_fxz = alpn1[i] * (Rxz[i] - EIGHT * PI * Sxz[i]) - fxz[i];
|
||||
double l_fyy = alpn1[i] * (Ryy[i] - EIGHT * PI * Syy[i]) - fyy[i];
|
||||
double l_fyz = alpn1[i] * (Ryz[i] - EIGHT * PI * Syz[i]) - fyz[i];
|
||||
double l_fzz = alpn1[i] * (Rzz[i] - EIGHT * PI * Szz[i]) - fzz[i];
|
||||
fxx[i] = alpn1[i] * (Rxx[i] - EIGHT * PI * Sxx[i]) - fxx[i];
|
||||
fxy[i] = alpn1[i] * (Rxy[i] - EIGHT * PI * Sxy[i]) - fxy[i];
|
||||
fxz[i] = alpn1[i] * (Rxz[i] - EIGHT * PI * Sxz[i]) - fxz[i];
|
||||
fyy[i] = alpn1[i] * (Ryy[i] - EIGHT * PI * Syy[i]) - fyy[i];
|
||||
fyz[i] = alpn1[i] * (Ryz[i] - EIGHT * PI * Syz[i]) - fyz[i];
|
||||
fzz[i] = alpn1[i] * (Rzz[i] - EIGHT * PI * Szz[i]) - fzz[i];
|
||||
}
|
||||
// 8ms //
|
||||
for (int i=0;i<all;i+=1) {
|
||||
|
||||
/* Aij_rhs = fij - gij * f */
|
||||
Axx_rhs[i] = l_fxx - (dxx[i] + ONE) * f[i];
|
||||
Ayy_rhs[i] = l_fyy - (dyy[i] + ONE) * f[i];
|
||||
Azz_rhs[i] = l_fzz - (dzz[i] + ONE) * f[i];
|
||||
Axy_rhs[i] = l_fxy - gxy[i] * f[i];
|
||||
Axz_rhs[i] = l_fxz - gxz[i] * f[i];
|
||||
Ayz_rhs[i] = l_fyz - gyz[i] * f[i];
|
||||
Axx_rhs[i] = fxx[i] - gxx[i] * f[i];
|
||||
Ayy_rhs[i] = fyy[i] - gyy[i] * f[i];
|
||||
Azz_rhs[i] = fzz[i] - gzz[i] * f[i];
|
||||
Axy_rhs[i] = fxy[i] - gxy[i] * f[i];
|
||||
Axz_rhs[i] = fxz[i] - gxz[i] * f[i];
|
||||
Ayz_rhs[i] = fyz[i] - gyz[i] * f[i];
|
||||
|
||||
/* Now: store A_il A^l_j into fij: */
|
||||
fxx[i] =
|
||||
@@ -890,19 +928,19 @@ int f_compute_rhs_bssn(int *ex, double &T,
|
||||
f[i] * Axx_rhs[i]
|
||||
+ alpn1[i] * ( trK[i] * Axx[i] - TWO * fxx[i] )
|
||||
+ TWO * ( Axx[i] * betaxx[i] + Axy[i] * betayx[i] + Axz[i] * betazx[i] )
|
||||
- F2o3 * Axx[i] * divb;
|
||||
- F2o3 * Axx[i] * div_beta[i];
|
||||
|
||||
Ayy_rhs[i] =
|
||||
f[i] * Ayy_rhs[i]
|
||||
+ alpn1[i] * ( trK[i] * Ayy[i] - TWO * fyy[i] )
|
||||
+ TWO * ( Axy[i] * betaxy[i] + Ayy[i] * betayy[i] + Ayz[i] * betazy[i] )
|
||||
- F2o3 * Ayy[i] * divb;
|
||||
- F2o3 * Ayy[i] * div_beta[i];
|
||||
|
||||
Azz_rhs[i] =
|
||||
f[i] * Azz_rhs[i]
|
||||
+ alpn1[i] * ( trK[i] * Azz[i] - TWO * fzz[i] )
|
||||
+ TWO * ( Axz[i] * betaxz[i] + Ayz[i] * betayz[i] + Azz[i] * betazz[i] )
|
||||
- F2o3 * Azz[i] * divb;
|
||||
- F2o3 * Azz[i] * div_beta[i];
|
||||
|
||||
Axy_rhs[i] =
|
||||
f[i] * Axy_rhs[i]
|
||||
@@ -911,7 +949,7 @@ int f_compute_rhs_bssn(int *ex, double &T,
|
||||
+ Axz[i] * betazy[i]
|
||||
+ Ayy[i] * betayx[i]
|
||||
+ Ayz[i] * betazx[i]
|
||||
+ F1o3 * Axy[i] * divb
|
||||
+ F1o3 * Axy[i] * div_beta[i]
|
||||
- Axy[i] * betazz[i];
|
||||
|
||||
Ayz_rhs[i] =
|
||||
@@ -921,7 +959,7 @@ int f_compute_rhs_bssn(int *ex, double &T,
|
||||
+ Ayy[i] * betayz[i]
|
||||
+ Axz[i] * betaxy[i]
|
||||
+ Azz[i] * betazy[i]
|
||||
+ F1o3 * Ayz[i] * divb
|
||||
+ F1o3 * Ayz[i] * div_beta[i]
|
||||
- Ayz[i] * betaxx[i];
|
||||
|
||||
Axz_rhs[i] =
|
||||
@@ -931,7 +969,7 @@ int f_compute_rhs_bssn(int *ex, double &T,
|
||||
+ Axy[i] * betayz[i]
|
||||
+ Ayz[i] * betayx[i]
|
||||
+ Azz[i] * betazx[i]
|
||||
+ F1o3 * Axz[i] * divb
|
||||
+ F1o3 * Axz[i] * div_beta[i]
|
||||
- Axz[i] * betayy[i];
|
||||
|
||||
/* Compute trace of S_ij */
|
||||
@@ -1062,31 +1100,58 @@ int f_compute_rhs_bssn(int *ex, double &T,
|
||||
dtSfz_rhs[i] = Gamz_rhs[i] - reta[i] * dtSfz[i];
|
||||
#endif
|
||||
}
|
||||
// advection + KO dissipation with shared symmetry buffer
|
||||
lopsided_kodis(ex,X,Y,Z,dxx,gxx_rhs,betax,betay,betaz,Symmetry,SSS,eps);
|
||||
lopsided_kodis(ex,X,Y,Z,Gamz,Gamz_rhs,betax,betay,betaz,Symmetry,SSA,eps);
|
||||
lopsided_kodis(ex,X,Y,Z,gxy,gxy_rhs,betax,betay,betaz,Symmetry,AAS,eps);
|
||||
lopsided_kodis(ex,X,Y,Z,Lap,Lap_rhs,betax,betay,betaz,Symmetry,SSS,eps);
|
||||
lopsided_kodis(ex,X,Y,Z,gxz,gxz_rhs,betax,betay,betaz,Symmetry,ASA,eps);
|
||||
lopsided_kodis(ex,X,Y,Z,betax,betax_rhs,betax,betay,betaz,Symmetry,ASS,eps);
|
||||
lopsided_kodis(ex,X,Y,Z,dyy,gyy_rhs,betax,betay,betaz,Symmetry,SSS,eps);
|
||||
lopsided_kodis(ex,X,Y,Z,betay,betay_rhs,betax,betay,betaz,Symmetry,SAS,eps);
|
||||
lopsided_kodis(ex,X,Y,Z,gyz,gyz_rhs,betax,betay,betaz,Symmetry,SAA,eps);
|
||||
lopsided_kodis(ex,X,Y,Z,betaz,betaz_rhs,betax,betay,betaz,Symmetry,SSA,eps);
|
||||
lopsided_kodis(ex,X,Y,Z,dzz,gzz_rhs,betax,betay,betaz,Symmetry,SSS,eps);
|
||||
lopsided_kodis(ex,X,Y,Z,dtSfx,dtSfx_rhs,betax,betay,betaz,Symmetry,ASS,eps);
|
||||
lopsided_kodis(ex,X,Y,Z,Axx,Axx_rhs,betax,betay,betaz,Symmetry,SSS,eps);
|
||||
lopsided_kodis(ex,X,Y,Z,dtSfy,dtSfy_rhs,betax,betay,betaz,Symmetry,SAS,eps);
|
||||
lopsided_kodis(ex,X,Y,Z,Axy,Axy_rhs,betax,betay,betaz,Symmetry,AAS,eps);
|
||||
lopsided_kodis(ex,X,Y,Z,dtSfz,dtSfz_rhs,betax,betay,betaz,Symmetry,SSA,eps);
|
||||
lopsided_kodis(ex,X,Y,Z,Axz,Axz_rhs,betax,betay,betaz,Symmetry,ASA,eps);
|
||||
lopsided_kodis(ex,X,Y,Z,Ayy,Ayy_rhs,betax,betay,betaz,Symmetry,SSS,eps);
|
||||
lopsided_kodis(ex,X,Y,Z,Ayz,Ayz_rhs,betax,betay,betaz,Symmetry,SAA,eps);
|
||||
lopsided_kodis(ex,X,Y,Z,Azz,Azz_rhs,betax,betay,betaz,Symmetry,SSS,eps);
|
||||
lopsided_kodis(ex,X,Y,Z,chi,chi_rhs,betax,betay,betaz,Symmetry,SSS,eps);
|
||||
lopsided_kodis(ex,X,Y,Z,trK,trK_rhs,betax,betay,betaz,Symmetry,SSS,eps);
|
||||
lopsided_kodis(ex,X,Y,Z,Gamx,Gamx_rhs,betax,betay,betaz,Symmetry,ASS,eps);
|
||||
lopsided_kodis(ex,X,Y,Z,Gamy,Gamy_rhs,betax,betay,betaz,Symmetry,SAS,eps);
|
||||
// 26ms //
|
||||
lopsided(ex,X,Y,Z,gxx,gxx_rhs,betax,betay,betaz,Symmetry,SSS);
|
||||
lopsided(ex,X,Y,Z,Gamz,Gamz_rhs,betax,betay,betaz,Symmetry,SSA);
|
||||
lopsided(ex,X,Y,Z,gxy,gxy_rhs,betax,betay,betaz,Symmetry,AAS);
|
||||
lopsided(ex,X,Y,Z,Lap,Lap_rhs,betax,betay,betaz,Symmetry,SSS);
|
||||
lopsided(ex,X,Y,Z,gxz,gxz_rhs,betax,betay,betaz,Symmetry,ASA);
|
||||
lopsided(ex,X,Y,Z,betax,betax_rhs,betax,betay,betaz,Symmetry,ASS);
|
||||
lopsided(ex,X,Y,Z,gyy,gyy_rhs,betax,betay,betaz,Symmetry,SSS);
|
||||
lopsided(ex,X,Y,Z,betay,betay_rhs,betax,betay,betaz,Symmetry,SAS);
|
||||
lopsided(ex,X,Y,Z,gyz,gyz_rhs,betax,betay,betaz,Symmetry,SAA);
|
||||
lopsided(ex,X,Y,Z,betaz,betaz_rhs,betax,betay,betaz,Symmetry,SSA);
|
||||
lopsided(ex,X,Y,Z,gzz,gzz_rhs,betax,betay,betaz,Symmetry,SSS);
|
||||
lopsided(ex,X,Y,Z,dtSfx,dtSfx_rhs,betax,betay,betaz,Symmetry,ASS);
|
||||
lopsided(ex,X,Y,Z,Axx,Axx_rhs,betax,betay,betaz,Symmetry,SSS);
|
||||
lopsided(ex,X,Y,Z,dtSfy,dtSfy_rhs,betax,betay,betaz,Symmetry,SAS);
|
||||
lopsided(ex,X,Y,Z,Axy,Axy_rhs,betax,betay,betaz,Symmetry,AAS);
|
||||
lopsided(ex,X,Y,Z,dtSfz,dtSfz_rhs,betax,betay,betaz,Symmetry,SSA);
|
||||
lopsided(ex,X,Y,Z,Axz,Axz_rhs,betax,betay,betaz,Symmetry,ASA);
|
||||
lopsided(ex,X,Y,Z,Ayy,Ayy_rhs,betax,betay,betaz,Symmetry,SSS);
|
||||
lopsided(ex,X,Y,Z,Ayz,Ayz_rhs,betax,betay,betaz,Symmetry,SAA);
|
||||
lopsided(ex,X,Y,Z,Azz,Azz_rhs,betax,betay,betaz,Symmetry,SSS);
|
||||
lopsided(ex,X,Y,Z,chi,chi_rhs,betax,betay,betaz,Symmetry,SSS);
|
||||
lopsided(ex,X,Y,Z,trK,trK_rhs,betax,betay,betaz,Symmetry,SSS);
|
||||
lopsided(ex,X,Y,Z,Gamx,Gamx_rhs,betax,betay,betaz,Symmetry,ASS);
|
||||
lopsided(ex,X,Y,Z,Gamy,Gamy_rhs,betax,betay,betaz,Symmetry,SAS);
|
||||
// 20ms //
|
||||
if(eps>0){
|
||||
kodis(ex,X,Y,Z,chi,chi_rhs,SSS,Symmetry,eps);
|
||||
kodis(ex,X,Y,Z,trK,trK_rhs,SSS,Symmetry,eps);
|
||||
kodis(ex,X,Y,Z,dxx,gxx_rhs,SSS,Symmetry,eps);
|
||||
kodis(ex,X,Y,Z,gxy,gxy_rhs,AAS,Symmetry,eps);
|
||||
kodis(ex,X,Y,Z,gxz,gxz_rhs,ASA,Symmetry,eps);
|
||||
kodis(ex,X,Y,Z,dyy,gyy_rhs,SSS,Symmetry,eps);
|
||||
kodis(ex,X,Y,Z,gyz,gyz_rhs,SAA,Symmetry,eps);
|
||||
kodis(ex,X,Y,Z,dzz,gzz_rhs,SSS,Symmetry,eps);
|
||||
kodis(ex,X,Y,Z,Axx,Axx_rhs,SSS,Symmetry,eps);
|
||||
kodis(ex,X,Y,Z,dtSfz,dtSfz_rhs,SSA,Symmetry,eps);
|
||||
kodis(ex,X,Y,Z,Axy,Axy_rhs,AAS,Symmetry,eps);
|
||||
kodis(ex,X,Y,Z,dtSfy,dtSfy_rhs,SAS,Symmetry,eps);
|
||||
kodis(ex,X,Y,Z,Axz,Axz_rhs,ASA,Symmetry,eps);
|
||||
kodis(ex,X,Y,Z,dtSfx,dtSfx_rhs,ASS,Symmetry,eps);
|
||||
kodis(ex,X,Y,Z,Ayy,Ayy_rhs,SSS,Symmetry,eps);
|
||||
kodis(ex,X,Y,Z,betaz,betaz_rhs,SSA,Symmetry,eps);
|
||||
kodis(ex,X,Y,Z,Ayz,Ayz_rhs,SAA,Symmetry,eps);
|
||||
kodis(ex,X,Y,Z,betay,betay_rhs,SAS,Symmetry,eps);
|
||||
kodis(ex,X,Y,Z,Azz,Azz_rhs,SSS,Symmetry,eps);
|
||||
kodis(ex,X,Y,Z,betax,betax_rhs,ASS,Symmetry,eps);
|
||||
kodis(ex,X,Y,Z,Gamx,Gamx_rhs,ASS,Symmetry,eps);
|
||||
kodis(ex,X,Y,Z,Lap,Lap_rhs,SSS,Symmetry,eps);
|
||||
kodis(ex,X,Y,Z,Gamy,Gamy_rhs,SAS,Symmetry,eps);
|
||||
kodis(ex,X,Y,Z,Gamz,Gamz_rhs,SSA,Symmetry,eps);
|
||||
}
|
||||
// 2ms //
|
||||
if(co==0){
|
||||
for (int i=0;i<all;i+=1) {
|
||||
|
||||
2565
AMSS_NCKU_source/bssn_rhs_cuda.cu
Normal file
2565
AMSS_NCKU_source/bssn_rhs_cuda.cu
Normal file
File diff suppressed because it is too large
Load Diff
36
AMSS_NCKU_source/bssn_rhs_cuda.h
Normal file
36
AMSS_NCKU_source/bssn_rhs_cuda.h
Normal file
@@ -0,0 +1,36 @@
|
||||
#ifndef BSSN_RHS_CUDA_H
|
||||
#define BSSN_RHS_CUDA_H
|
||||
|
||||
#ifdef __cplusplus
|
||||
extern "C" {
|
||||
#endif
|
||||
|
||||
int f_compute_rhs_bssn(int *ex, double &T,
|
||||
double *X, double *Y, double *Z,
|
||||
double *chi, double *trK,
|
||||
double *dxx, double *gxy, double *gxz, double *dyy, double *gyz, double *dzz,
|
||||
double *Axx, double *Axy, double *Axz, double *Ayy, double *Ayz, double *Azz,
|
||||
double *Gamx, double *Gamy, double *Gamz,
|
||||
double *Lap, double *betax, double *betay, double *betaz,
|
||||
double *dtSfx, double *dtSfy, double *dtSfz,
|
||||
double *chi_rhs, double *trK_rhs,
|
||||
double *gxx_rhs, double *gxy_rhs, double *gxz_rhs, double *gyy_rhs, double *gyz_rhs, double *gzz_rhs,
|
||||
double *Axx_rhs, double *Axy_rhs, double *Axz_rhs, double *Ayy_rhs, double *Ayz_rhs, double *Azz_rhs,
|
||||
double *Gamx_rhs, double *Gamy_rhs, double *Gamz_rhs,
|
||||
double *Lap_rhs, double *betax_rhs, double *betay_rhs, double *betaz_rhs,
|
||||
double *dtSfx_rhs, double *dtSfy_rhs, double *dtSfz_rhs,
|
||||
double *rho, double *Sx, double *Sy, double *Sz,
|
||||
double *Sxx, double *Sxy, double *Sxz, double *Syy, double *Syz, double *Szz,
|
||||
double *Gamxxx, double *Gamxxy, double *Gamxxz, double *Gamxyy, double *Gamxyz, double *Gamxzz,
|
||||
double *Gamyxx, double *Gamyxy, double *Gamyxz, double *Gamyyy, double *Gamyyz, double *Gamyzz,
|
||||
double *Gamzxx, double *Gamzxy, double *Gamzxz, double *Gamzyy, double *Gamzyz, double *Gamzzz,
|
||||
double *Rxx, double *Rxy, double *Rxz, double *Ryy, double *Ryz, double *Rzz,
|
||||
double *ham_Res, double *movx_Res, double *movy_Res, double *movz_Res,
|
||||
double *Gmx_Res, double *Gmy_Res, double *Gmz_Res,
|
||||
int &Symmetry, int &Lev, double &eps, int &co);
|
||||
|
||||
#ifdef __cplusplus
|
||||
}
|
||||
#endif
|
||||
|
||||
#endif
|
||||
@@ -141,12 +141,26 @@ void fdderivs(const int ex[3],
|
||||
const int j4_hi = ex2 - 3;
|
||||
const int k4_hi = ex3 - 3;
|
||||
|
||||
/*
|
||||
* Strategy A:
|
||||
* Avoid redundant work in overlap of 2nd/4th-order regions.
|
||||
* Only compute 2nd-order on shell points that are NOT overwritten by
|
||||
* the 4th-order pass.
|
||||
*/
|
||||
const int has4 = (i4_lo <= i4_hi && j4_lo <= j4_hi && k4_lo <= k4_hi);
|
||||
|
||||
if (i2_lo <= i2_hi && j2_lo <= j2_hi && k2_lo <= k2_hi) {
|
||||
for (int k0 = k2_lo; k0 <= k2_hi; ++k0) {
|
||||
const int kF = k0 + 1;
|
||||
for (int j0 = j2_lo; j0 <= j2_hi; ++j0) {
|
||||
const int jF = j0 + 1;
|
||||
for (int i0 = i2_lo; i0 <= i2_hi; ++i0) {
|
||||
if (has4 &&
|
||||
i0 >= i4_lo && i0 <= i4_hi &&
|
||||
j0 >= j4_lo && j0 <= j4_hi &&
|
||||
k0 >= k4_lo && k0 <= k4_hi) {
|
||||
continue;
|
||||
}
|
||||
const int iF = i0 + 1;
|
||||
const size_t p = idx_ex(i0, j0, k0, ex);
|
||||
|
||||
@@ -193,7 +207,7 @@ void fdderivs(const int ex[3],
|
||||
}
|
||||
}
|
||||
|
||||
if (i4_lo <= i4_hi && j4_lo <= j4_hi && k4_lo <= k4_hi) {
|
||||
if (has4) {
|
||||
for (int k0 = k4_lo; k0 <= k4_hi; ++k0) {
|
||||
const int kF = k0 + 1;
|
||||
for (int j0 = j4_lo; j0 <= j4_hi; ++j0) {
|
||||
|
||||
@@ -81,63 +81,26 @@ void fderivs(const int ex[3],
|
||||
}
|
||||
|
||||
/*
|
||||
* 两段式:
|
||||
* 1) 先在二阶可用区域计算二阶模板
|
||||
* 2) 再在高阶可用区域覆盖为四阶模板
|
||||
* Fortran loops:
|
||||
* do k=1,ex3-1
|
||||
* do j=1,ex2-1
|
||||
* do i=1,ex1-1
|
||||
*
|
||||
* 与原 if/elseif 逻辑等价,但减少逐点分支判断。
|
||||
* C: k0=0..ex3-2, j0=0..ex2-2, i0=0..ex1-2
|
||||
*/
|
||||
const int i2_lo = (iminF > 0) ? iminF : 0;
|
||||
const int j2_lo = (jminF > 0) ? jminF : 0;
|
||||
const int k2_lo = (kminF > 0) ? kminF : 0;
|
||||
const int i2_hi = ex1 - 2;
|
||||
const int j2_hi = ex2 - 2;
|
||||
const int k2_hi = ex3 - 2;
|
||||
|
||||
const int i4_lo = (iminF + 1 > 0) ? (iminF + 1) : 0;
|
||||
const int j4_lo = (jminF + 1 > 0) ? (jminF + 1) : 0;
|
||||
const int k4_lo = (kminF + 1 > 0) ? (kminF + 1) : 0;
|
||||
const int i4_hi = ex1 - 3;
|
||||
const int j4_hi = ex2 - 3;
|
||||
const int k4_hi = ex3 - 3;
|
||||
|
||||
if (i2_lo <= i2_hi && j2_lo <= j2_hi && k2_lo <= k2_hi) {
|
||||
for (int k0 = k2_lo; k0 <= k2_hi; ++k0) {
|
||||
const int kF = k0 + 1;
|
||||
for (int j0 = j2_lo; j0 <= j2_hi; ++j0) {
|
||||
const int jF = j0 + 1;
|
||||
for (int i0 = i2_lo; i0 <= i2_hi; ++i0) {
|
||||
const int iF = i0 + 1;
|
||||
const size_t p = idx_ex(i0, j0, k0, ex);
|
||||
|
||||
fx[p] = d2dx * (
|
||||
-fh[idx_fh_F_ord2(iF - 1, jF, kF, ex)] +
|
||||
fh[idx_fh_F_ord2(iF + 1, jF, kF, ex)]
|
||||
);
|
||||
|
||||
fy[p] = d2dy * (
|
||||
-fh[idx_fh_F_ord2(iF, jF - 1, kF, ex)] +
|
||||
fh[idx_fh_F_ord2(iF, jF + 1, kF, ex)]
|
||||
);
|
||||
|
||||
fz[p] = d2dz * (
|
||||
-fh[idx_fh_F_ord2(iF, jF, kF - 1, ex)] +
|
||||
fh[idx_fh_F_ord2(iF, jF, kF + 1, ex)]
|
||||
);
|
||||
}
|
||||
}
|
||||
}
|
||||
}
|
||||
|
||||
if (i4_lo <= i4_hi && j4_lo <= j4_hi && k4_lo <= k4_hi) {
|
||||
for (int k0 = k4_lo; k0 <= k4_hi; ++k0) {
|
||||
const int kF = k0 + 1;
|
||||
for (int j0 = j4_lo; j0 <= j4_hi; ++j0) {
|
||||
const int jF = j0 + 1;
|
||||
for (int i0 = i4_lo; i0 <= i4_hi; ++i0) {
|
||||
const int iF = i0 + 1;
|
||||
const size_t p = idx_ex(i0, j0, k0, ex);
|
||||
for (int k0 = 0; k0 <= ex3 - 2; ++k0) {
|
||||
const int kF = k0 + 1;
|
||||
for (int j0 = 0; j0 <= ex2 - 2; ++j0) {
|
||||
const int jF = j0 + 1;
|
||||
for (int i0 = 0; i0 <= ex1 - 2; ++i0) {
|
||||
const int iF = i0 + 1;
|
||||
const size_t p = idx_ex(i0, j0, k0, ex);
|
||||
|
||||
// if(i+2 <= imax .and. i-2 >= imin ... ) (全是 Fortran 索引)
|
||||
if ((iF + 2) <= imaxF && (iF - 2) >= iminF &&
|
||||
(jF + 2) <= jmaxF && (jF - 2) >= jminF &&
|
||||
(kF + 2) <= kmaxF && (kF - 2) >= kminF)
|
||||
{
|
||||
fx[p] = d12dx * (
|
||||
fh[idx_fh_F_ord2(iF - 2, jF, kF, ex)] -
|
||||
EIT * fh[idx_fh_F_ord2(iF - 1, jF, kF, ex)] +
|
||||
@@ -159,9 +122,29 @@ void fderivs(const int ex[3],
|
||||
fh[idx_fh_F_ord2(iF, jF, kF + 2, ex)]
|
||||
);
|
||||
}
|
||||
// elseif(i+1 <= imax .and. i-1 >= imin ...)
|
||||
else if ((iF + 1) <= imaxF && (iF - 1) >= iminF &&
|
||||
(jF + 1) <= jmaxF && (jF - 1) >= jminF &&
|
||||
(kF + 1) <= kmaxF && (kF - 1) >= kminF)
|
||||
{
|
||||
fx[p] = d2dx * (
|
||||
-fh[idx_fh_F_ord2(iF - 1, jF, kF, ex)] +
|
||||
fh[idx_fh_F_ord2(iF + 1, jF, kF, ex)]
|
||||
);
|
||||
|
||||
fy[p] = d2dy * (
|
||||
-fh[idx_fh_F_ord2(iF, jF - 1, kF, ex)] +
|
||||
fh[idx_fh_F_ord2(iF, jF + 1, kF, ex)]
|
||||
);
|
||||
|
||||
fz[p] = d2dz * (
|
||||
-fh[idx_fh_F_ord2(iF, jF, kF - 1, ex)] +
|
||||
fh[idx_fh_F_ord2(iF, jF, kF + 1, ex)]
|
||||
);
|
||||
}
|
||||
}
|
||||
}
|
||||
}
|
||||
|
||||
// free(fh);
|
||||
}
|
||||
}
|
||||
@@ -1327,6 +1327,35 @@ end subroutine d2dump
|
||||
|
||||
return
|
||||
end subroutine polint
|
||||
|
||||
subroutine polint0(xa, ya, y, ordn)
|
||||
! Lagrange interpolation at x=0, O(n) direct formula
|
||||
implicit none
|
||||
integer, intent(in) :: ordn
|
||||
real*8, dimension(ordn), intent(in) :: xa, ya
|
||||
real*8, intent(out) :: y
|
||||
|
||||
integer :: j, k
|
||||
real*8 :: wj
|
||||
|
||||
y = 0.d0
|
||||
do j = 1, ordn
|
||||
wj = 1.d0
|
||||
do k = 1, ordn
|
||||
if (k .ne. j) then
|
||||
wj = wj * xa(k) / (xa(k) - xa(j))
|
||||
endif
|
||||
enddo
|
||||
y = y + wj * ya(j)
|
||||
enddo
|
||||
|
||||
return
|
||||
end subroutine polint0
|
||||
!------------------------------------------------------------------------------
|
||||
!
|
||||
! interpolation in 2 dimensions, follow yx order
|
||||
!
|
||||
!------------------------------------------------------------------------------
|
||||
!------------------------------------------------------------------------------
|
||||
! Compute Lagrange interpolation basis weights for one target point.
|
||||
!------------------------------------------------------------------------------
|
||||
|
||||
@@ -1,5 +1,3 @@
|
||||
/* 本头文件由自订profile框架自动生成并非人工硬编码针对Case优化 */
|
||||
/* 更新:负载均衡问题已经通过优化插值函数解决,此profile静态均衡方案已弃用,本头文件现在未参与编译 */
|
||||
/* Auto-generated from interp_lb_profile.bin — do not edit */
|
||||
#ifndef INTERP_LB_PROFILE_DATA_H
|
||||
#define INTERP_LB_PROFILE_DATA_H
|
||||
|
||||
@@ -63,28 +63,19 @@ void kodis(const int ex[3],
|
||||
* C: k0=0..ex3-1, j0=0..ex2-1, i0=0..ex1-1
|
||||
* 并定义 Fortran index: iF=i0+1, ...
|
||||
*/
|
||||
// 收紧循环范围:只遍历满足 iF±3/jF±3/kF±3 条件的内部点
|
||||
// iF-3 >= iminF => iF >= iminF+3 => i0 >= iminF+2 (因为 iF=i0+1)
|
||||
// iF+3 <= imaxF => iF <= imaxF-3 => i0 <= imaxF-4
|
||||
const int i0_lo = (iminF + 2 > 0) ? iminF + 2 : 0;
|
||||
const int j0_lo = (jminF + 2 > 0) ? jminF + 2 : 0;
|
||||
const int k0_lo = (kminF + 2 > 0) ? kminF + 2 : 0;
|
||||
const int i0_hi = imaxF - 4; // inclusive
|
||||
const int j0_hi = jmaxF - 4;
|
||||
const int k0_hi = kmaxF - 4;
|
||||
|
||||
if (i0_lo > i0_hi || j0_lo > j0_hi || k0_lo > k0_hi) {
|
||||
free(fh);
|
||||
return;
|
||||
}
|
||||
|
||||
for (int k0 = k0_lo; k0 <= k0_hi; ++k0) {
|
||||
for (int k0 = 0; k0 < ex3; ++k0) {
|
||||
const int kF = k0 + 1;
|
||||
for (int j0 = j0_lo; j0 <= j0_hi; ++j0) {
|
||||
for (int j0 = 0; j0 < ex2; ++j0) {
|
||||
const int jF = j0 + 1;
|
||||
for (int i0 = i0_lo; i0 <= i0_hi; ++i0) {
|
||||
for (int i0 = 0; i0 < ex1; ++i0) {
|
||||
const int iF = i0 + 1;
|
||||
|
||||
// Fortran if 条件:
|
||||
// i-3 >= imin .and. i+3 <= imax 等(都是 Fortran 索引)
|
||||
if ((iF - 3) >= iminF && (iF + 3) <= imaxF &&
|
||||
(jF - 3) >= jminF && (jF + 3) <= jmaxF &&
|
||||
(kF - 3) >= kminF && (kF + 3) <= kmaxF)
|
||||
{
|
||||
const size_t p = idx_ex(i0, j0, k0, ex);
|
||||
|
||||
// 三个方向各一份同型的 7 点组合(实际上是对称的 6th-order dissipation/filter 核)
|
||||
@@ -109,6 +100,7 @@ void kodis(const int ex[3],
|
||||
// Fortran:
|
||||
// f_rhs(i,j,k) = f_rhs(i,j,k) + eps/cof*(Dx_term + Dy_term + Dz_term)
|
||||
f_rhs[p] += (eps / cof) * (Dx_term + Dy_term + Dz_term);
|
||||
}
|
||||
}
|
||||
}
|
||||
}
|
||||
|
||||
@@ -1,248 +0,0 @@
|
||||
#include "tool.h"
|
||||
|
||||
/*
|
||||
* Combined advection (lopsided) + KO dissipation (kodis).
|
||||
* Uses one shared symmetry_bd buffer per call.
|
||||
*/
|
||||
void lopsided_kodis(const int ex[3],
|
||||
const double *X, const double *Y, const double *Z,
|
||||
const double *f, double *f_rhs,
|
||||
const double *Sfx, const double *Sfy, const double *Sfz,
|
||||
int Symmetry, const double SoA[3], double eps)
|
||||
{
|
||||
const double ZEO = 0.0, ONE = 1.0, F3 = 3.0;
|
||||
const double F6 = 6.0, F18 = 18.0;
|
||||
const double F12 = 12.0, F10 = 10.0, EIT = 8.0;
|
||||
const double SIX = 6.0, FIT = 15.0, TWT = 20.0;
|
||||
const double cof = 64.0; // 2^6
|
||||
|
||||
const int NO_SYMM = 0, EQ_SYMM = 1;
|
||||
|
||||
const int ex1 = ex[0], ex2 = ex[1], ex3 = ex[2];
|
||||
|
||||
const double dX = X[1] - X[0];
|
||||
const double dY = Y[1] - Y[0];
|
||||
const double dZ = Z[1] - Z[0];
|
||||
|
||||
const double d12dx = ONE / F12 / dX;
|
||||
const double d12dy = ONE / F12 / dY;
|
||||
const double d12dz = ONE / F12 / dZ;
|
||||
|
||||
const int imaxF = ex1;
|
||||
const int jmaxF = ex2;
|
||||
const int kmaxF = ex3;
|
||||
|
||||
int iminF = 1, jminF = 1, kminF = 1;
|
||||
if (Symmetry > NO_SYMM && fabs(Z[0]) < dZ) kminF = -2;
|
||||
if (Symmetry > EQ_SYMM && fabs(X[0]) < dX) iminF = -2;
|
||||
if (Symmetry > EQ_SYMM && fabs(Y[0]) < dY) jminF = -2;
|
||||
|
||||
// fh for Fortran-style domain (-2:ex1,-2:ex2,-2:ex3)
|
||||
const size_t nx = (size_t)ex1 + 3;
|
||||
const size_t ny = (size_t)ex2 + 3;
|
||||
const size_t nz = (size_t)ex3 + 3;
|
||||
const size_t fh_size = nx * ny * nz;
|
||||
|
||||
double *fh = (double*)malloc(fh_size * sizeof(double));
|
||||
if (!fh) return;
|
||||
|
||||
symmetry_bd(3, ex, f, fh, SoA);
|
||||
|
||||
// Advection (same stencil logic as lopsided_c.C)
|
||||
for (int k0 = 0; k0 <= ex3 - 2; ++k0) {
|
||||
const int kF = k0 + 1;
|
||||
for (int j0 = 0; j0 <= ex2 - 2; ++j0) {
|
||||
const int jF = j0 + 1;
|
||||
for (int i0 = 0; i0 <= ex1 - 2; ++i0) {
|
||||
const int iF = i0 + 1;
|
||||
const size_t p = idx_ex(i0, j0, k0, ex);
|
||||
|
||||
const double sfx = Sfx[p];
|
||||
if (sfx > ZEO) {
|
||||
if (i0 <= ex1 - 4) {
|
||||
f_rhs[p] += sfx * d12dx *
|
||||
(-F3 * fh[idx_fh_F(iF - 1, jF, kF, ex)]
|
||||
-F10 * fh[idx_fh_F(iF , jF, kF, ex)]
|
||||
+F18 * fh[idx_fh_F(iF + 1, jF, kF, ex)]
|
||||
-F6 * fh[idx_fh_F(iF + 2, jF, kF, ex)]
|
||||
+ fh[idx_fh_F(iF + 3, jF, kF, ex)]);
|
||||
} else if (i0 <= ex1 - 3) {
|
||||
f_rhs[p] += sfx * d12dx *
|
||||
( fh[idx_fh_F(iF - 2, jF, kF, ex)]
|
||||
-EIT * fh[idx_fh_F(iF - 1, jF, kF, ex)]
|
||||
+EIT * fh[idx_fh_F(iF + 1, jF, kF, ex)]
|
||||
- fh[idx_fh_F(iF + 2, jF, kF, ex)]);
|
||||
} else if (i0 <= ex1 - 2) {
|
||||
f_rhs[p] -= sfx * d12dx *
|
||||
(-F3 * fh[idx_fh_F(iF + 1, jF, kF, ex)]
|
||||
-F10 * fh[idx_fh_F(iF , jF, kF, ex)]
|
||||
+F18 * fh[idx_fh_F(iF - 1, jF, kF, ex)]
|
||||
-F6 * fh[idx_fh_F(iF - 2, jF, kF, ex)]
|
||||
+ fh[idx_fh_F(iF - 3, jF, kF, ex)]);
|
||||
}
|
||||
} else if (sfx < ZEO) {
|
||||
if ((i0 - 2) >= iminF) {
|
||||
f_rhs[p] -= sfx * d12dx *
|
||||
(-F3 * fh[idx_fh_F(iF + 1, jF, kF, ex)]
|
||||
-F10 * fh[idx_fh_F(iF , jF, kF, ex)]
|
||||
+F18 * fh[idx_fh_F(iF - 1, jF, kF, ex)]
|
||||
-F6 * fh[idx_fh_F(iF - 2, jF, kF, ex)]
|
||||
+ fh[idx_fh_F(iF - 3, jF, kF, ex)]);
|
||||
} else if ((i0 - 1) >= iminF) {
|
||||
f_rhs[p] += sfx * d12dx *
|
||||
( fh[idx_fh_F(iF - 2, jF, kF, ex)]
|
||||
-EIT * fh[idx_fh_F(iF - 1, jF, kF, ex)]
|
||||
+EIT * fh[idx_fh_F(iF + 1, jF, kF, ex)]
|
||||
- fh[idx_fh_F(iF + 2, jF, kF, ex)]);
|
||||
} else if (i0 >= iminF) {
|
||||
f_rhs[p] += sfx * d12dx *
|
||||
(-F3 * fh[idx_fh_F(iF - 1, jF, kF, ex)]
|
||||
-F10 * fh[idx_fh_F(iF , jF, kF, ex)]
|
||||
+F18 * fh[idx_fh_F(iF + 1, jF, kF, ex)]
|
||||
-F6 * fh[idx_fh_F(iF + 2, jF, kF, ex)]
|
||||
+ fh[idx_fh_F(iF + 3, jF, kF, ex)]);
|
||||
}
|
||||
}
|
||||
|
||||
const double sfy = Sfy[p];
|
||||
if (sfy > ZEO) {
|
||||
if (j0 <= ex2 - 4) {
|
||||
f_rhs[p] += sfy * d12dy *
|
||||
(-F3 * fh[idx_fh_F(iF, jF - 1, kF, ex)]
|
||||
-F10 * fh[idx_fh_F(iF, jF , kF, ex)]
|
||||
+F18 * fh[idx_fh_F(iF, jF + 1, kF, ex)]
|
||||
-F6 * fh[idx_fh_F(iF, jF + 2, kF, ex)]
|
||||
+ fh[idx_fh_F(iF, jF + 3, kF, ex)]);
|
||||
} else if (j0 <= ex2 - 3) {
|
||||
f_rhs[p] += sfy * d12dy *
|
||||
( fh[idx_fh_F(iF, jF - 2, kF, ex)]
|
||||
-EIT * fh[idx_fh_F(iF, jF - 1, kF, ex)]
|
||||
+EIT * fh[idx_fh_F(iF, jF + 1, kF, ex)]
|
||||
- fh[idx_fh_F(iF, jF + 2, kF, ex)]);
|
||||
} else if (j0 <= ex2 - 2) {
|
||||
f_rhs[p] -= sfy * d12dy *
|
||||
(-F3 * fh[idx_fh_F(iF, jF + 1, kF, ex)]
|
||||
-F10 * fh[idx_fh_F(iF, jF , kF, ex)]
|
||||
+F18 * fh[idx_fh_F(iF, jF - 1, kF, ex)]
|
||||
-F6 * fh[idx_fh_F(iF, jF - 2, kF, ex)]
|
||||
+ fh[idx_fh_F(iF, jF - 3, kF, ex)]);
|
||||
}
|
||||
} else if (sfy < ZEO) {
|
||||
if ((j0 - 2) >= jminF) {
|
||||
f_rhs[p] -= sfy * d12dy *
|
||||
(-F3 * fh[idx_fh_F(iF, jF + 1, kF, ex)]
|
||||
-F10 * fh[idx_fh_F(iF, jF , kF, ex)]
|
||||
+F18 * fh[idx_fh_F(iF, jF - 1, kF, ex)]
|
||||
-F6 * fh[idx_fh_F(iF, jF - 2, kF, ex)]
|
||||
+ fh[idx_fh_F(iF, jF - 3, kF, ex)]);
|
||||
} else if ((j0 - 1) >= jminF) {
|
||||
f_rhs[p] += sfy * d12dy *
|
||||
( fh[idx_fh_F(iF, jF - 2, kF, ex)]
|
||||
-EIT * fh[idx_fh_F(iF, jF - 1, kF, ex)]
|
||||
+EIT * fh[idx_fh_F(iF, jF + 1, kF, ex)]
|
||||
- fh[idx_fh_F(iF, jF + 2, kF, ex)]);
|
||||
} else if (j0 >= jminF) {
|
||||
f_rhs[p] += sfy * d12dy *
|
||||
(-F3 * fh[idx_fh_F(iF, jF - 1, kF, ex)]
|
||||
-F10 * fh[idx_fh_F(iF, jF , kF, ex)]
|
||||
+F18 * fh[idx_fh_F(iF, jF + 1, kF, ex)]
|
||||
-F6 * fh[idx_fh_F(iF, jF + 2, kF, ex)]
|
||||
+ fh[idx_fh_F(iF, jF + 3, kF, ex)]);
|
||||
}
|
||||
}
|
||||
|
||||
const double sfz = Sfz[p];
|
||||
if (sfz > ZEO) {
|
||||
if (k0 <= ex3 - 4) {
|
||||
f_rhs[p] += sfz * d12dz *
|
||||
(-F3 * fh[idx_fh_F(iF, jF, kF - 1, ex)]
|
||||
-F10 * fh[idx_fh_F(iF, jF, kF , ex)]
|
||||
+F18 * fh[idx_fh_F(iF, jF, kF + 1, ex)]
|
||||
-F6 * fh[idx_fh_F(iF, jF, kF + 2, ex)]
|
||||
+ fh[idx_fh_F(iF, jF, kF + 3, ex)]);
|
||||
} else if (k0 <= ex3 - 3) {
|
||||
f_rhs[p] += sfz * d12dz *
|
||||
( fh[idx_fh_F(iF, jF, kF - 2, ex)]
|
||||
-EIT * fh[idx_fh_F(iF, jF, kF - 1, ex)]
|
||||
+EIT * fh[idx_fh_F(iF, jF, kF + 1, ex)]
|
||||
- fh[idx_fh_F(iF, jF, kF + 2, ex)]);
|
||||
} else if (k0 <= ex3 - 2) {
|
||||
f_rhs[p] -= sfz * d12dz *
|
||||
(-F3 * fh[idx_fh_F(iF, jF, kF + 1, ex)]
|
||||
-F10 * fh[idx_fh_F(iF, jF, kF , ex)]
|
||||
+F18 * fh[idx_fh_F(iF, jF, kF - 1, ex)]
|
||||
-F6 * fh[idx_fh_F(iF, jF, kF - 2, ex)]
|
||||
+ fh[idx_fh_F(iF, jF, kF - 3, ex)]);
|
||||
}
|
||||
} else if (sfz < ZEO) {
|
||||
if ((k0 - 2) >= kminF) {
|
||||
f_rhs[p] -= sfz * d12dz *
|
||||
(-F3 * fh[idx_fh_F(iF, jF, kF + 1, ex)]
|
||||
-F10 * fh[idx_fh_F(iF, jF, kF , ex)]
|
||||
+F18 * fh[idx_fh_F(iF, jF, kF - 1, ex)]
|
||||
-F6 * fh[idx_fh_F(iF, jF, kF - 2, ex)]
|
||||
+ fh[idx_fh_F(iF, jF, kF - 3, ex)]);
|
||||
} else if ((k0 - 1) >= kminF) {
|
||||
f_rhs[p] += sfz * d12dz *
|
||||
( fh[idx_fh_F(iF, jF, kF - 2, ex)]
|
||||
-EIT * fh[idx_fh_F(iF, jF, kF - 1, ex)]
|
||||
+EIT * fh[idx_fh_F(iF, jF, kF + 1, ex)]
|
||||
- fh[idx_fh_F(iF, jF, kF + 2, ex)]);
|
||||
} else if (k0 >= kminF) {
|
||||
f_rhs[p] += sfz * d12dz *
|
||||
(-F3 * fh[idx_fh_F(iF, jF, kF - 1, ex)]
|
||||
-F10 * fh[idx_fh_F(iF, jF, kF , ex)]
|
||||
+F18 * fh[idx_fh_F(iF, jF, kF + 1, ex)]
|
||||
-F6 * fh[idx_fh_F(iF, jF, kF + 2, ex)]
|
||||
+ fh[idx_fh_F(iF, jF, kF + 3, ex)]);
|
||||
}
|
||||
}
|
||||
}
|
||||
}
|
||||
}
|
||||
|
||||
// KO dissipation (same domain restriction as kodiss_c.C)
|
||||
if (eps > ZEO) {
|
||||
const int i0_lo = (iminF + 2 > 0) ? iminF + 2 : 0;
|
||||
const int j0_lo = (jminF + 2 > 0) ? jminF + 2 : 0;
|
||||
const int k0_lo = (kminF + 2 > 0) ? kminF + 2 : 0;
|
||||
const int i0_hi = imaxF - 4; // inclusive
|
||||
const int j0_hi = jmaxF - 4;
|
||||
const int k0_hi = kmaxF - 4;
|
||||
|
||||
if (!(i0_lo > i0_hi || j0_lo > j0_hi || k0_lo > k0_hi)) {
|
||||
for (int k0 = k0_lo; k0 <= k0_hi; ++k0) {
|
||||
const int kF = k0 + 1;
|
||||
for (int j0 = j0_lo; j0 <= j0_hi; ++j0) {
|
||||
const int jF = j0 + 1;
|
||||
for (int i0 = i0_lo; i0 <= i0_hi; ++i0) {
|
||||
const int iF = i0 + 1;
|
||||
const size_t p = idx_ex(i0, j0, k0, ex);
|
||||
|
||||
const double Dx_term =
|
||||
((fh[idx_fh_F(iF - 3, jF, kF, ex)] + fh[idx_fh_F(iF + 3, jF, kF, ex)]) -
|
||||
SIX * (fh[idx_fh_F(iF - 2, jF, kF, ex)] + fh[idx_fh_F(iF + 2, jF, kF, ex)]) +
|
||||
FIT * (fh[idx_fh_F(iF - 1, jF, kF, ex)] + fh[idx_fh_F(iF + 1, jF, kF, ex)]) -
|
||||
TWT * fh[idx_fh_F(iF, jF, kF, ex)]) / dX;
|
||||
|
||||
const double Dy_term =
|
||||
((fh[idx_fh_F(iF, jF - 3, kF, ex)] + fh[idx_fh_F(iF, jF + 3, kF, ex)]) -
|
||||
SIX * (fh[idx_fh_F(iF, jF - 2, kF, ex)] + fh[idx_fh_F(iF, jF + 2, kF, ex)]) +
|
||||
FIT * (fh[idx_fh_F(iF, jF - 1, kF, ex)] + fh[idx_fh_F(iF, jF + 1, kF, ex)]) -
|
||||
TWT * fh[idx_fh_F(iF, jF, kF, ex)]) / dY;
|
||||
|
||||
const double Dz_term =
|
||||
((fh[idx_fh_F(iF, jF, kF - 3, ex)] + fh[idx_fh_F(iF, jF, kF + 3, ex)]) -
|
||||
SIX * (fh[idx_fh_F(iF, jF, kF - 2, ex)] + fh[idx_fh_F(iF, jF, kF + 2, ex)]) +
|
||||
FIT * (fh[idx_fh_F(iF, jF, kF - 1, ex)] + fh[idx_fh_F(iF, jF, kF + 1, ex)]) -
|
||||
TWT * fh[idx_fh_F(iF, jF, kF, ex)]) / dZ;
|
||||
|
||||
f_rhs[p] += (eps / cof) * (Dx_term + Dy_term + Dz_term);
|
||||
}
|
||||
}
|
||||
}
|
||||
}
|
||||
}
|
||||
|
||||
free(fh);
|
||||
}
|
||||
@@ -1,35 +1,33 @@
|
||||
|
||||
|
||||
include makefile.inc
|
||||
|
||||
## polint(ordn=6) kernel selector:
|
||||
## 1 (default): barycentric fast path
|
||||
## 0 : fallback to Neville path
|
||||
POLINT6_USE_BARY ?= 1
|
||||
POLINT6_FLAG = -DPOLINT6_USE_BARYCENTRIC=$(POLINT6_USE_BARY)
|
||||
|
||||
## ABE build flags selected by PGO_MODE (set in makefile.inc, default: opt)
|
||||
## make -> opt (PGO-guided, maximum performance)
|
||||
## make PGO_MODE=instrument -> instrument (Phase 1: collect fresh profile data)
|
||||
PROFDATA = /home/$(shell whoami)/AMSS-NCKU/pgo_profile/default.profdata
|
||||
include makefile.inc
|
||||
|
||||
## polint(ordn=6) kernel selector:
|
||||
## 1 (default): barycentric fast path
|
||||
## 0 : fallback to Neville path
|
||||
POLINT6_USE_BARY ?= 1
|
||||
POLINT6_FLAG = -DPOLINT6_USE_BARYCENTRIC=$(POLINT6_USE_BARY)
|
||||
|
||||
## ABE build flags selected by PGO_MODE (set in makefile.inc, default: opt)
|
||||
## make -> opt (PGO-guided, maximum performance)
|
||||
## make PGO_MODE=instrument -> instrument (Phase 1: collect fresh profile data)
|
||||
PROFDATA = /home/$(shell whoami)/AMSS-NCKU/pgo_profile/default.profdata
|
||||
|
||||
ifeq ($(PGO_MODE),instrument)
|
||||
## Phase 1: instrumentation — omit -ipo/-fp-model fast=2 for faster build and numerical stability
|
||||
CXXAPPFLAGS = -O3 -xHost -fma -fprofile-instr-generate -ipo \
|
||||
-Dfortran3 -Dnewc -I${MKLROOT}/include $(INTERP_LB_FLAGS)
|
||||
f90appflags = -O3 -xHost -fma -fprofile-instr-generate -ipo \
|
||||
-align array64byte -fpp -I${MKLROOT}/include $(POLINT6_FLAG)
|
||||
else
|
||||
## opt (default): maximum performance with PGO profile data -fprofile-instr-use=$(PROFDATA) \
|
||||
## PGO has been turned off, now tested and found to be negative optimization
|
||||
## INTERP_LB_FLAGS has been turned off too, now tested and found to be negative optimization
|
||||
|
||||
|
||||
CXXAPPFLAGS = -O3 -xHost -fp-model fast=2 -fma -ipo \
|
||||
-Dfortran3 -Dnewc -I${MKLROOT}/include $(INTERP_LB_FLAGS)
|
||||
f90appflags = -O3 -xHost -fp-model fast=2 -fma -ipo \
|
||||
-align array64byte -fpp -I${MKLROOT}/include $(POLINT6_FLAG)
|
||||
endif
|
||||
CXXAPPFLAGS = -O3 -xHost -fma -fprofile-instr-generate -ipo \
|
||||
-Dfortran3 -Dnewc -I${MKLROOT}/include $(INTERP_LB_FLAGS)
|
||||
f90appflags = -O3 -xHost -fma -fprofile-instr-generate -ipo \
|
||||
-align array64byte -fpp -I${MKLROOT}/include $(POLINT6_FLAG)
|
||||
else
|
||||
## opt (default): maximum performance with PGO profile data
|
||||
CXXAPPFLAGS = -O3 -xHost -fp-model fast=2 -fma -ipo \
|
||||
-fprofile-instr-use=$(PROFDATA) \
|
||||
-Dfortran3 -Dnewc -I${MKLROOT}/include $(INTERP_LB_FLAGS)
|
||||
f90appflags = -O3 -xHost -fp-model fast=2 -fma -ipo \
|
||||
-fprofile-instr-use=$(PROFDATA) \
|
||||
-align array64byte -fpp -I${MKLROOT}/include $(POLINT6_FLAG)
|
||||
endif
|
||||
|
||||
.SUFFIXES: .o .f90 .C .for .cu
|
||||
|
||||
@@ -45,6 +43,10 @@ endif
|
||||
.cu.o:
|
||||
$(Cu) $(CUDA_APP_FLAGS) -c $< -o $@ $(CUDA_LIB_PATH)
|
||||
|
||||
# CUDA rewrite of BSSN RHS (drop-in replacement for bssn_rhs_c + stencil helpers)
|
||||
bssn_rhs_cuda.o: bssn_rhs_cuda.cu macrodef.h
|
||||
$(Cu) $(CUDA_APP_FLAGS) -c $< -o $@ $(CUDA_LIB_PATH)
|
||||
|
||||
# C rewrite of BSSN RHS kernel and helpers
|
||||
bssn_rhs_c.o: bssn_rhs_c.C
|
||||
${CXX} $(CXXAPPFLAGS) -c $< $(filein) -o $@
|
||||
@@ -58,14 +60,11 @@ fdderivs_c.o: fdderivs_c.C
|
||||
kodiss_c.o: kodiss_c.C
|
||||
${CXX} $(CXXAPPFLAGS) -c $< $(filein) -o $@
|
||||
|
||||
lopsided_c.o: lopsided_c.C
|
||||
${CXX} $(CXXAPPFLAGS) -c $< $(filein) -o $@
|
||||
|
||||
lopsided_kodis_c.o: lopsided_kodis_c.C
|
||||
${CXX} $(CXXAPPFLAGS) -c $< $(filein) -o $@
|
||||
|
||||
interp_lb_profile.o: interp_lb_profile.C interp_lb_profile.h
|
||||
${CXX} $(CXXAPPFLAGS) -c $< $(filein) -o $@
|
||||
lopsided_c.o: lopsided_c.C
|
||||
${CXX} $(CXXAPPFLAGS) -c $< $(filein) -o $@
|
||||
|
||||
interp_lb_profile.o: interp_lb_profile.C interp_lb_profile.h
|
||||
${CXX} $(CXXAPPFLAGS) -c $< $(filein) -o $@
|
||||
|
||||
## TwoPunctureABE uses fixed optimal flags with its own PGO profile, independent of CXXAPPFLAGS
|
||||
TP_PROFDATA = /home/$(shell whoami)/AMSS-NCKU/pgo_profile/TwoPunctureABE.profdata
|
||||
@@ -82,21 +81,25 @@ TwoPunctureABE.o: TwoPunctureABE.C
|
||||
# Input files
|
||||
|
||||
## Kernel implementation switch (set USE_CXX_KERNELS=0 to fall back to Fortran)
|
||||
ifeq ($(USE_CXX_KERNELS),0)
|
||||
# Fortran mode: no C rewrite files; bssn_rhs.o is included via F90FILES below
|
||||
CFILES =
|
||||
else
|
||||
# C++ mode (default): C rewrite of bssn_rhs and helper kernels
|
||||
CFILES = bssn_rhs_c.o fderivs_c.o fdderivs_c.o kodiss_c.o lopsided_c.o lopsided_kodis_c.o
|
||||
endif
|
||||
|
||||
## RK4 kernel switch (independent from USE_CXX_KERNELS)
|
||||
ifeq ($(USE_CXX_RK4),1)
|
||||
CFILES += rungekutta4_rout_c.o
|
||||
RK4_F90_OBJ =
|
||||
else
|
||||
RK4_F90_OBJ = rungekutta4_rout.o
|
||||
endif
|
||||
ifeq ($(USE_CXX_KERNELS),0)
|
||||
# Fortran mode: no C rewrite files; bssn_rhs.o is included via F90FILES below
|
||||
CFILES =
|
||||
else
|
||||
# C++ mode (default): C rewrite of bssn_rhs and helper kernels
|
||||
CFILES = bssn_rhs_c.o fderivs_c.o fdderivs_c.o kodiss_c.o lopsided_c.o
|
||||
endif
|
||||
|
||||
# CUDA rewrite: bssn_rhs_cuda.o replaces all CFILES (stencils are built-in)
|
||||
CFILES_CUDA = bssn_rhs_cuda.o
|
||||
|
||||
## RK4 kernel switch (independent from USE_CXX_KERNELS)
|
||||
ifeq ($(USE_CXX_RK4),1)
|
||||
CFILES += rungekutta4_rout_c.o
|
||||
CFILES_CUDA += rungekutta4_rout_c.o
|
||||
RK4_F90_OBJ =
|
||||
else
|
||||
RK4_F90_OBJ = rungekutta4_rout.o
|
||||
endif
|
||||
|
||||
C++FILES = ABE.o Ansorg.o Block.o misc.o monitor.o Parallel.o MPatch.o var.o\
|
||||
cgh.o bssn_class.o surface_integral.o ShellPatch.o\
|
||||
@@ -113,12 +116,12 @@ C++FILES_GPU = ABE.o Ansorg.o Block.o misc.o monitor.o Parallel.o MPatch.o var.o
|
||||
NullShellPatch2_Evo.o \
|
||||
bssn_gpu_class.o bssn_step_gpu.o bssn_macro.o writefile_f.o
|
||||
|
||||
F90FILES_BASE = enforce_algebra.o fmisc.o initial_puncture.o prolongrestrict.o\
|
||||
prolongrestrict_cell.o prolongrestrict_vertex.o\
|
||||
$(RK4_F90_OBJ) diff_new.o kodiss.o kodiss_sh.o\
|
||||
lopsidediff.o sommerfeld_rout.o getnp4.o diff_new_sh.o\
|
||||
shellfunctions.o bssn_rhs_ss.o Set_Rho_ADM.o\
|
||||
getnp4EScalar.o bssnEScalar_rhs.o bssn_constraint.o ricci_gamma.o\
|
||||
F90FILES_BASE = enforce_algebra.o fmisc.o initial_puncture.o prolongrestrict.o\
|
||||
prolongrestrict_cell.o prolongrestrict_vertex.o\
|
||||
$(RK4_F90_OBJ) diff_new.o kodiss.o kodiss_sh.o\
|
||||
lopsidediff.o sommerfeld_rout.o getnp4.o diff_new_sh.o\
|
||||
shellfunctions.o bssn_rhs_ss.o Set_Rho_ADM.o\
|
||||
getnp4EScalar.o bssnEScalar_rhs.o bssn_constraint.o ricci_gamma.o\
|
||||
fadmquantites_bssn.o Z4c_rhs.o Z4c_rhs_ss.o point_diff_new_sh.o\
|
||||
cpbc.o getnp4old.o NullEvol.o initial_null.o initial_maxwell.o\
|
||||
getnpem2.o empart.o NullNews.o fourdcurvature.o\
|
||||
@@ -178,9 +181,12 @@ $(CUDAFILES): bssn_gpu.h gpu_mem.h gpu_rhsSS_mem.h
|
||||
misc.o : zbesh.o
|
||||
|
||||
# projects
|
||||
ABE: $(C++FILES) $(CFILES) $(F90FILES) $(F77FILES) $(AHFDOBJS)
|
||||
$(CLINKER) $(CXXAPPFLAGS) -o $@ $(C++FILES) $(CFILES) $(F90FILES) $(F77FILES) $(AHFDOBJS) $(LDLIBS)
|
||||
|
||||
ABE: $(C++FILES) $(CFILES_CUDA) $(F90FILES) $(F77FILES) $(AHFDOBJS)
|
||||
$(CLINKER) $(CXXAPPFLAGS) -o $@ $(C++FILES) $(CFILES_CUDA) $(F90FILES) $(F77FILES) $(AHFDOBJS) $(LDLIBS) -lcudart $(CUDA_LIB_PATH)
|
||||
|
||||
ABE_CUDA: $(C++FILES) $(CFILES_CUDA) $(F90FILES) $(F77FILES) $(AHFDOBJS)
|
||||
$(CLINKER) $(CXXAPPFLAGS) -o $@ $(C++FILES) $(CFILES_CUDA) $(F90FILES) $(F77FILES) $(AHFDOBJS) $(LDLIBS) -lcudart $(CUDA_LIB_PATH)
|
||||
|
||||
ABEGPU: $(C++FILES_GPU) $(CFILES) $(F90FILES) $(F77FILES) $(AHFDOBJS) $(CUDAFILES)
|
||||
$(CLINKER) $(CXXAPPFLAGS) -o $@ $(C++FILES_GPU) $(CFILES) $(F90FILES) $(F77FILES) $(AHFDOBJS) $(CUDAFILES) $(LDLIBS)
|
||||
|
||||
@@ -188,4 +194,4 @@ TwoPunctureABE: $(TwoPunctureFILES)
|
||||
$(CLINKER) $(TP_OPTFLAGS) -qopenmp -o $@ $(TwoPunctureFILES) $(LDLIBS)
|
||||
|
||||
clean:
|
||||
rm *.o ABE ABEGPU TwoPunctureABE make.log -f
|
||||
rm *.o ABE ABE_CUDA ABEGPU TwoPunctureABE make.log -f
|
||||
|
||||
@@ -62,4 +62,4 @@ CLINKER = mpiicpx
|
||||
Cu = nvcc
|
||||
CUDA_LIB_PATH = -L/usr/lib/cuda/lib64 -I/usr/include -I/usr/lib/cuda/include
|
||||
#CUDA_APP_FLAGS = -c -g -O3 --ptxas-options=-v -arch compute_13 -code compute_13,sm_13 -Dfortran3 -Dnewc
|
||||
CUDA_APP_FLAGS = -c -g -O3 --ptxas-options=-v -Dfortran3 -Dnewc
|
||||
CUDA_APP_FLAGS = -c -g -O3 --ptxas-options=-v -Dfortran3 -Dnewc -arch=sm_80
|
||||
|
||||
@@ -217,7 +217,6 @@
|
||||
real*8,dimension(2*ghost_width) :: X,Y,Z
|
||||
real*8, dimension(2*ghost_width,2*ghost_width) :: tmp2
|
||||
real*8, dimension(2*ghost_width) :: tmp1
|
||||
real*8 :: ddy
|
||||
real*8,dimension(3) :: ccp
|
||||
|
||||
#if (ghost_width == 2)
|
||||
@@ -580,7 +579,7 @@
|
||||
tmp1(ghost_width-cxI(1)+cxB(1) :ghost_width-cxI(1)+cxT(1) ) = funf(cxB(1):cxT(1),j,k)
|
||||
endif
|
||||
|
||||
call polint(X,tmp1,0.d0,funf(i,j,k),ddy,2*ghost_width)
|
||||
call polint0(X,tmp1,funf(i,j,k),2*ghost_width)
|
||||
|
||||
! for y direction
|
||||
elseif(sum(fg).eq.2.and.fg(2) .eq. 0.and. &
|
||||
@@ -690,7 +689,7 @@
|
||||
tmp1(ghost_width-cxI(2)+cxB(2) :ghost_width-cxI(2)+cxT(2) ) = funf(i,cxB(2):cxT(2),k)
|
||||
endif
|
||||
|
||||
call polint(Y,tmp1,0.d0,funf(i,j,k),ddy,2*ghost_width)
|
||||
call polint0(Y,tmp1,funf(i,j,k),2*ghost_width)
|
||||
|
||||
! for z direction
|
||||
elseif(sum(fg).eq.2.and.fg(3) .eq. 0.and. &
|
||||
@@ -802,7 +801,7 @@
|
||||
tmp1(ghost_width-cxI(3)+cxB(3) :ghost_width-cxI(3)+cxT(3) ) = funf(i,j,cxB(3):cxT(3))
|
||||
endif
|
||||
|
||||
call polint(Z,tmp1,0.d0,funf(i,j,k),ddy,2*ghost_width)
|
||||
call polint0(Z,tmp1,funf(i,j,k),2*ghost_width)
|
||||
|
||||
#else
|
||||
|
||||
@@ -1956,11 +1955,13 @@
|
||||
|
||||
real*8,dimension(3) :: CD,FD
|
||||
real*8 :: tmp_yz(extc(1), 6) ! 存储整条 X 线上 6 个 Y 轴偏置的 Z 向插值结果
|
||||
real*8 :: tmp_xyz_line(extc(1)) ! 存储整条 X 线上完成 Y 向融合后的结果
|
||||
real*8 :: tmp_xyz_line(-2:extc(1)) ! 包含 X 向 6 点模板访问所需下界
|
||||
real*8 :: v1, v2, v3, v4, v5, v6
|
||||
integer :: ic, jc, kc, ix_offset,ix,iy,iz,jc_min,jc_max
|
||||
integer :: ic, jc, kc, ix_offset,ix,iy,iz,jc_min,jc_max,ic_min,ic_max,kc_min,kc_max
|
||||
integer :: i_lo, i_hi, j_lo, j_hi, k_lo, k_hi
|
||||
logical :: need_full_symmetry
|
||||
real*8 :: res_line
|
||||
real*8 :: tmp_z_slab(extc(1), extc(2)) ! 分配在 k 循环外
|
||||
real*8 :: tmp_z_slab(-2:extc(1), -2:extc(2)) ! 包含 Y/X 向模板访问所需下界
|
||||
if(wei.ne.3)then
|
||||
write(*,*)"prolongrestrict.f90::prolong3: this routine only surport 3 dimension"
|
||||
write(*,*)"dim = ",wei
|
||||
@@ -2063,24 +2064,41 @@
|
||||
endif
|
||||
enddo
|
||||
|
||||
maxcx = maxval(cix(imino:imaxo))
|
||||
maxcy = maxval(ciy(jmino:jmaxo))
|
||||
maxcz = maxval(ciz(kmino:kmaxo))
|
||||
ic_min = minval(cix(imino:imaxo))
|
||||
ic_max = maxval(cix(imino:imaxo))
|
||||
jc_min = minval(ciy(jmino:jmaxo))
|
||||
jc_max = maxval(ciy(jmino:jmaxo))
|
||||
kc_min = minval(ciz(kmino:kmaxo))
|
||||
kc_max = maxval(ciz(kmino:kmaxo))
|
||||
|
||||
maxcx = ic_max
|
||||
maxcy = jc_max
|
||||
maxcz = kc_max
|
||||
if(maxcx+3 > extc(1) .or. maxcy+3 > extc(2) .or. maxcz+3 > extc(3))then
|
||||
write(*,*)"error in prolong"
|
||||
return
|
||||
endif
|
||||
|
||||
call symmetry_bd(3,extc,func,funcc,SoA)
|
||||
i_lo = ic_min - 2
|
||||
i_hi = ic_max + 3
|
||||
j_lo = jc_min - 2
|
||||
j_hi = jc_max + 3
|
||||
k_lo = kc_min - 2
|
||||
k_hi = kc_max + 3
|
||||
need_full_symmetry = (i_lo < 1) .or. (j_lo < 1) .or. (k_lo < 1)
|
||||
if(need_full_symmetry)then
|
||||
call symmetry_bd(3,extc,func,funcc,SoA)
|
||||
else
|
||||
funcc(i_lo:i_hi,j_lo:j_hi,k_lo:k_hi) = func(i_lo:i_hi,j_lo:j_hi,k_lo:k_hi)
|
||||
endif
|
||||
|
||||
! 对每个 k(pz, kc 固定)预计算 Z 向插值的 2D 切片
|
||||
jc_min = minval(ciy(jmino:jmaxo))
|
||||
jc_max = maxval(ciy(jmino:jmaxo))
|
||||
|
||||
do k = kmino, kmaxo
|
||||
pz = piz(k); kc = ciz(k)
|
||||
! --- Pass 1: Z 方向,只算一次 ---
|
||||
do iy = jc_min-3, jc_max+3 ! 仅需的 iy 范围
|
||||
do ii = imini-3, imaxi+3 ! 仅需的 ii 范围
|
||||
do iy = jc_min-2, jc_max+3 ! 仅需的 iy 范围(对应 jc-2:jc+3)
|
||||
do ii = ic_min-2, ic_max+3 ! 仅需的 ii 范围(对应 cix-2:cix+3)
|
||||
tmp_z_slab(ii, iy) = sum(WC(:,pz) * funcc(ii, iy, kc-2:kc+3))
|
||||
end do
|
||||
end do
|
||||
@@ -2088,7 +2106,7 @@ do k = kmino, kmaxo
|
||||
do j = jmino, jmaxo
|
||||
py = piy(j); jc = ciy(j)
|
||||
! --- Pass 2: Y 方向 ---
|
||||
do ii = imini-3, imaxi+3
|
||||
do ii = ic_min-2, ic_max+3
|
||||
tmp_xyz_line(ii) = sum(WC(:,py) * tmp_z_slab(ii, jc-2:jc+3))
|
||||
end do
|
||||
! --- Pass 3: X 方向 ---
|
||||
@@ -2351,9 +2369,12 @@ end do
|
||||
|
||||
real*8,dimension(3) :: CD,FD
|
||||
|
||||
real*8 :: tmp_xz_plane(extf(1), 6)
|
||||
real*8 :: tmp_x_line(extf(1))
|
||||
real*8 :: tmp_xz_plane(-1:extf(1), 6)
|
||||
real*8 :: tmp_x_line(-1:extf(1))
|
||||
integer :: fi, fj, fk, ii, jj, kk
|
||||
integer :: fi_min, fi_max, ii_lo, ii_hi
|
||||
integer :: fj_min, fj_max, fk_min, fk_max, jj_lo, jj_hi, kk_lo, kk_hi
|
||||
logical :: need_full_symmetry
|
||||
|
||||
if(wei.ne.3)then
|
||||
write(*,*)"prolongrestrict.f90::restrict3: this routine only surport 3 dimension"
|
||||
@@ -2433,7 +2454,34 @@ end do
|
||||
stop
|
||||
endif
|
||||
|
||||
call symmetry_bd(2,extf,funf,funff,SoA)
|
||||
! 仅计算 X 向最终写回所需的窗口:
|
||||
! func(i,j,k) 只访问 tmp_x_line(fi-2:fi+3)
|
||||
fi_min = 2*(imino + lbc(1) - 1) - 1 - lbf(1) + 1
|
||||
fi_max = 2*(imaxo + lbc(1) - 1) - 1 - lbf(1) + 1
|
||||
fj_min = 2*(jmino + lbc(2) - 1) - 1 - lbf(2) + 1
|
||||
fj_max = 2*(jmaxo + lbc(2) - 1) - 1 - lbf(2) + 1
|
||||
fk_min = 2*(kmino + lbc(3) - 1) - 1 - lbf(3) + 1
|
||||
fk_max = 2*(kmaxo + lbc(3) - 1) - 1 - lbf(3) + 1
|
||||
ii_lo = fi_min - 2
|
||||
ii_hi = fi_max + 3
|
||||
jj_lo = fj_min - 2
|
||||
jj_hi = fj_max + 3
|
||||
kk_lo = fk_min - 2
|
||||
kk_hi = fk_max + 3
|
||||
if(ii_lo < -1 .or. ii_hi > extf(1) .or. &
|
||||
jj_lo < -1 .or. jj_hi > extf(2) .or. &
|
||||
kk_lo < -1 .or. kk_hi > extf(3))then
|
||||
write(*,*)"restrict3: invalid stencil window"
|
||||
write(*,*)"ii=",ii_lo,ii_hi," jj=",jj_lo,jj_hi," kk=",kk_lo,kk_hi
|
||||
write(*,*)"extf=",extf
|
||||
stop
|
||||
endif
|
||||
need_full_symmetry = (ii_lo < 1) .or. (jj_lo < 1) .or. (kk_lo < 1)
|
||||
if(need_full_symmetry)then
|
||||
call symmetry_bd(2,extf,funf,funff,SoA)
|
||||
else
|
||||
funff(ii_lo:ii_hi,jj_lo:jj_hi,kk_lo:kk_hi) = funf(ii_lo:ii_hi,jj_lo:jj_hi,kk_lo:kk_hi)
|
||||
endif
|
||||
|
||||
!~~~~~~> restriction start...
|
||||
do k = kmino, kmaxo
|
||||
@@ -2445,7 +2493,7 @@ do k = kmino, kmaxo
|
||||
! 优化点 1: 显式展开 Z 方向计算,减少循环开销
|
||||
! 确保 ii 循环是最内层且连续访问
|
||||
!DIR$ VECTOR ALWAYS
|
||||
do ii = 1, extf(1)
|
||||
do ii = ii_lo, ii_hi
|
||||
! 预计算当前 j 对应的 6 行在 Z 方向的压缩结果
|
||||
! 这里直接硬编码 jj 的偏移,彻底消除一层循环
|
||||
tmp_xz_plane(ii, 1) = C1*(funff(ii,fj-2,fk-2)+funff(ii,fj-2,fk+3)) + &
|
||||
@@ -2470,7 +2518,7 @@ do k = kmino, kmaxo
|
||||
|
||||
! 优化点 2: 同样向量化 Y 方向压缩
|
||||
!DIR$ VECTOR ALWAYS
|
||||
do ii = 1, extf(1)
|
||||
do ii = ii_lo, ii_hi
|
||||
tmp_x_line(ii) = C1*(tmp_xz_plane(ii, 1) + tmp_xz_plane(ii, 6)) + &
|
||||
C2*(tmp_xz_plane(ii, 2) + tmp_xz_plane(ii, 5)) + &
|
||||
C3*(tmp_xz_plane(ii, 3) + tmp_xz_plane(ii, 4))
|
||||
|
||||
@@ -217,7 +217,6 @@
|
||||
real*8,dimension(2*ghost_width) :: X,Y,Z
|
||||
real*8, dimension(2*ghost_width,2*ghost_width) :: tmp2
|
||||
real*8, dimension(2*ghost_width) :: tmp1
|
||||
real*8 :: ddy
|
||||
|
||||
#if (ghost_width == 2)
|
||||
real*8, parameter :: C1=-1.d0/16,C2=9.d0/16
|
||||
@@ -470,7 +469,7 @@
|
||||
|
||||
tmp1(cxB(1)+ghost_width-i+1:cxT(1)+ghost_width-i+1) = fh(cxB(1):cxT(1),j,k)
|
||||
|
||||
call polint(X,tmp1,0.d0,funf(i,j,k),ddy,2*ghost_width)
|
||||
call polint0(X,tmp1,funf(i,j,k),2*ghost_width)
|
||||
|
||||
! for y direction
|
||||
elseif (fg(2) .eq. 0)then
|
||||
@@ -529,7 +528,7 @@
|
||||
|
||||
tmp1(cxB(2)+ghost_width-j+1:cxT(2)+ghost_width-j+1) = fh(i,cxB(2):cxT(2),k)
|
||||
|
||||
call polint(Y,tmp1,0.d0,funf(i,j,k),ddy,2*ghost_width)
|
||||
call polint0(Y,tmp1,funf(i,j,k),2*ghost_width)
|
||||
|
||||
! for z direction
|
||||
else
|
||||
@@ -588,7 +587,7 @@
|
||||
|
||||
tmp1(cxB(3)+ghost_width-k+1:cxT(3)+ghost_width-k+1) = fh(i,j,cxB(3):cxT(3))
|
||||
|
||||
call polint(Z,tmp1,0.d0,funf(i,j,k),ddy,2*ghost_width)
|
||||
call polint0(Z,tmp1,funf(i,j,k),2*ghost_width)
|
||||
|
||||
endif
|
||||
|
||||
|
||||
@@ -2,7 +2,6 @@
|
||||
#include <cstdio>
|
||||
#include <cstdlib>
|
||||
#include <cstddef>
|
||||
#include <complex>
|
||||
#include <immintrin.h>
|
||||
|
||||
namespace {
|
||||
@@ -118,62 +117,6 @@ inline void rk4_stage3(std::size_t n,
|
||||
|
||||
extern "C" {
|
||||
|
||||
void f_rungekutta4_scalar(double &dT, double &f0, double &f1, double &f_rhs, int &RK4) {
|
||||
constexpr double F1o6 = 1.0 / 6.0;
|
||||
constexpr double HLF = 0.5;
|
||||
constexpr double TWO = 2.0;
|
||||
|
||||
switch (RK4) {
|
||||
case 0:
|
||||
f1 = f0 + HLF * dT * f_rhs;
|
||||
break;
|
||||
case 1:
|
||||
f_rhs = f_rhs + TWO * f1;
|
||||
f1 = f0 + HLF * dT * f1;
|
||||
break;
|
||||
case 2:
|
||||
f_rhs = f_rhs + TWO * f1;
|
||||
f1 = f0 + dT * f1;
|
||||
break;
|
||||
case 3:
|
||||
f1 = f0 + F1o6 * dT * (f1 + f_rhs);
|
||||
break;
|
||||
default:
|
||||
std::fprintf(stderr, "rungekutta4_scalar_c: invalid RK4 stage %d\n", RK4);
|
||||
std::abort();
|
||||
}
|
||||
}
|
||||
|
||||
void rungekutta4_cplxscalar_(double &dT,
|
||||
std::complex<double> &f0,
|
||||
std::complex<double> &f1,
|
||||
std::complex<double> &f_rhs,
|
||||
int &RK4) {
|
||||
constexpr double F1o6 = 1.0 / 6.0;
|
||||
constexpr double HLF = 0.5;
|
||||
constexpr double TWO = 2.0;
|
||||
|
||||
switch (RK4) {
|
||||
case 0:
|
||||
f1 = f0 + HLF * dT * f_rhs;
|
||||
break;
|
||||
case 1:
|
||||
f_rhs = f_rhs + TWO * f1;
|
||||
f1 = f0 + HLF * dT * f1;
|
||||
break;
|
||||
case 2:
|
||||
f_rhs = f_rhs + TWO * f1;
|
||||
f1 = f0 + dT * f1;
|
||||
break;
|
||||
case 3:
|
||||
f1 = f0 + F1o6 * dT * (f1 + f_rhs);
|
||||
break;
|
||||
default:
|
||||
std::fprintf(stderr, "rungekutta4_cplxscalar_c: invalid RK4 stage %d\n", RK4);
|
||||
std::abort();
|
||||
}
|
||||
}
|
||||
|
||||
int f_rungekutta4_rout(int *ex, double &dT,
|
||||
double *f0, double *f1, double *f_rhs,
|
||||
int &RK4) {
|
||||
|
||||
@@ -24,10 +24,4 @@ void lopsided(const int ex[3],
|
||||
const double *X, const double *Y, const double *Z,
|
||||
const double *f, double *f_rhs,
|
||||
const double *Sfx, const double *Sfy, const double *Sfz,
|
||||
int Symmetry, const double SoA[3]);
|
||||
|
||||
void lopsided_kodis(const int ex[3],
|
||||
const double *X, const double *Y, const double *Z,
|
||||
const double *f, double *f_rhs,
|
||||
const double *Sfx, const double *Sfy, const double *Sfz,
|
||||
int Symmetry, const double SoA[3], double eps);
|
||||
int Symmetry, const double SoA[3]);
|
||||
@@ -70,7 +70,7 @@ def makefile_ABE():
|
||||
|
||||
## Build command with CPU binding to nohz_full cores
|
||||
if (input_data.GPU_Calculation == "no"):
|
||||
makefile_command = f"{NUMACTL_CPU_BIND} make -j{BUILD_JOBS} INTERP_LB_MODE=off ABE"
|
||||
makefile_command = f"{NUMACTL_CPU_BIND} make -j{BUILD_JOBS} INTERP_LB_MODE=optimize ABE"
|
||||
elif (input_data.GPU_Calculation == "yes"):
|
||||
makefile_command = f"{NUMACTL_CPU_BIND} make -j{BUILD_JOBS} ABEGPU"
|
||||
else:
|
||||
|
||||
97
pgo_profile/PGO_Profile_Analysis.md
Normal file
97
pgo_profile/PGO_Profile_Analysis.md
Normal file
@@ -0,0 +1,97 @@
|
||||
# AMSS-NCKU PGO Profile Analysis Report
|
||||
|
||||
## 1. Profiling Environment
|
||||
|
||||
| Item | Value |
|
||||
|------|-------|
|
||||
| Compiler | Intel oneAPI DPC++/C++ 2025.3.0 (icpx/ifx) |
|
||||
| Instrumentation Flag | `-fprofile-instr-generate` |
|
||||
| Optimization Level (instrumented) | `-O2 -xHost -fma` |
|
||||
| MPI Processes | 1 (single process to avoid MPI+instrumentation deadlock) |
|
||||
| Profile File | `default_9725750769337483397_0.profraw` (327 KB) |
|
||||
| Merged Profile | `default.profdata` (394 KB) |
|
||||
| llvm-profdata | `/home/intel/oneapi/compiler/2025.3/bin/compiler/llvm-profdata` |
|
||||
|
||||
## 2. Reduced Simulation Parameters (for profiling run)
|
||||
|
||||
| Parameter | Production Value | Profiling Value |
|
||||
|-----------|-----------------|-----------------|
|
||||
| MPI_processes | 64 | 1 |
|
||||
| grid_level | 9 | 4 |
|
||||
| static_grid_level | 5 | 3 |
|
||||
| static_grid_number | 96 | 24 |
|
||||
| moving_grid_number | 48 | 16 |
|
||||
| largest_box_xyz_max | 320^3 | 160^3 |
|
||||
| Final_Evolution_Time | 1000.0 | 10.0 |
|
||||
| Evolution_Step_Number | 10,000,000 | 1,000 |
|
||||
| Detector_Number | 12 | 2 |
|
||||
|
||||
## 3. Profile Summary
|
||||
|
||||
| Metric | Value |
|
||||
|--------|-------|
|
||||
| Total instrumented functions | 1,392 |
|
||||
| Functions with non-zero counts | 117 (8.4%) |
|
||||
| Functions with zero counts | 1,275 (91.6%) |
|
||||
| Maximum function entry count | 386,459,248 |
|
||||
| Maximum internal block count | 370,477,680 |
|
||||
| Total block count | 4,198,023,118 |
|
||||
|
||||
## 4. Top 20 Hotspot Functions
|
||||
|
||||
| Rank | Total Count | Max Block Count | Function | Category |
|
||||
|------|------------|-----------------|----------|----------|
|
||||
| 1 | 1,241,601,732 | 370,477,680 | `polint_` | Interpolation |
|
||||
| 2 | 755,994,435 | 230,156,640 | `prolong3_` | Grid prolongation |
|
||||
| 3 | 667,964,095 | 3,697,792 | `compute_rhs_bssn_` | BSSN RHS evolution |
|
||||
| 4 | 539,736,051 | 386,459,248 | `symmetry_bd_` | Symmetry boundary |
|
||||
| 5 | 277,310,808 | 53,170,728 | `lopsided_` | Lopsided FD stencil |
|
||||
| 6 | 155,534,488 | 94,535,040 | `decide3d_` | 3D grid decision |
|
||||
| 7 | 119,267,712 | 19,266,048 | `rungekutta4_rout_` | RK4 time integrator |
|
||||
| 8 | 91,574,616 | 48,824,160 | `kodis_` | Kreiss-Oliger dissipation |
|
||||
| 9 | 67,555,389 | 43,243,680 | `fderivs_` | Finite differences |
|
||||
| 10 | 55,296,000 | 42,246,144 | `misc::fact(int)` | Factorial utility |
|
||||
| 11 | 43,191,071 | 27,663,328 | `fdderivs_` | 2nd-order FD derivatives |
|
||||
| 12 | 36,233,965 | 22,429,440 | `restrict3_` | Grid restriction |
|
||||
| 13 | 24,698,512 | 17,231,520 | `polin3_` | Polynomial interpolation |
|
||||
| 14 | 22,962,942 | 20,968,768 | `copy_` | Data copy |
|
||||
| 15 | 20,135,696 | 17,259,168 | `Ansorg::barycentric(...)` | Spectral interpolation |
|
||||
| 16 | 14,650,224 | 7,224,768 | `Ansorg::barycentric_omega(...)` | Spectral weights |
|
||||
| 17 | 13,242,296 | 2,871,920 | `global_interp_` | Global interpolation |
|
||||
| 18 | 12,672,000 | 7,734,528 | `sommerfeld_rout_` | Sommerfeld boundary |
|
||||
| 19 | 6,872,832 | 1,880,064 | `sommerfeld_routbam_` | Sommerfeld boundary (BAM) |
|
||||
| 20 | 5,709,900 | 2,809,632 | `l2normhelper_` | L2 norm computation |
|
||||
|
||||
## 5. Hotspot Category Breakdown
|
||||
|
||||
Top 20 functions account for ~98% of total execution counts:
|
||||
|
||||
| Category | Functions | Combined Count | Share |
|
||||
|----------|-----------|---------------|-------|
|
||||
| Interpolation / Prolongation / Restriction | polint_, prolong3_, restrict3_, polin3_, global_interp_, Ansorg::* | ~2,093M | ~50% |
|
||||
| BSSN RHS + FD stencils | compute_rhs_bssn_, lopsided_, fderivs_, fdderivs_ | ~1,056M | ~25% |
|
||||
| Boundary conditions | symmetry_bd_, sommerfeld_rout_, sommerfeld_routbam_ | ~559M | ~13% |
|
||||
| Time integration | rungekutta4_rout_ | ~119M | ~3% |
|
||||
| Dissipation | kodis_ | ~92M | ~2% |
|
||||
| Utilities | misc::fact, decide3d_, copy_, l2normhelper_ | ~256M | ~6% |
|
||||
|
||||
## 6. Conclusions
|
||||
|
||||
1. **Profile data is valid**: 1,392 functions instrumented, 117 exercised with ~4.2 billion total counts.
|
||||
2. **Hotspot concentration is high**: Top 5 functions alone account for ~76% of all counts, which is ideal for PGO — the compiler has strong branch/layout optimization targets.
|
||||
3. **Fortran numerical kernels dominate**: `polint_`, `prolong3_`, `compute_rhs_bssn_`, `symmetry_bd_`, `lopsided_` are all Fortran routines in the inner evolution loop. PGO will optimize their branch prediction and basic block layout.
|
||||
4. **91.6% of functions have zero counts**: These are code paths for unused features (GPU, BSSN-EScalar, BSSN-EM, Z4C, etc.). PGO will deprioritize them, improving instruction cache utilization.
|
||||
5. **Profile is representative**: Despite the reduced grid size, the code path coverage matches production — the same kernels (RHS, prolongation, restriction, boundary) are exercised. PGO branch probabilities from this profile will transfer well to full-scale runs.
|
||||
|
||||
## 7. PGO Phase 2 Usage
|
||||
|
||||
To apply the profile, use the following flags in `makefile.inc`:
|
||||
|
||||
```makefile
|
||||
CXXAPPFLAGS = -O3 -xHost -fp-model fast=2 -fma -ipo \
|
||||
-fprofile-instr-use=/home/amss/AMSS-NCKU/pgo_profile/default.profdata \
|
||||
-Dfortran3 -Dnewc -I${MKLROOT}/include
|
||||
f90appflags = -O3 -xHost -fp-model fast=2 -fma -ipo \
|
||||
-fprofile-instr-use=/home/amss/AMSS-NCKU/pgo_profile/default.profdata \
|
||||
-align array64byte -fpp -I${MKLROOT}/include
|
||||
```
|
||||
Binary file not shown.
Binary file not shown.
BIN
pgo_profile/default.profdata.backup
Normal file
BIN
pgo_profile/default.profdata.backup
Normal file
Binary file not shown.
BIN
pgo_profile/default.profdata.backup2
Normal file
BIN
pgo_profile/default.profdata.backup2
Normal file
Binary file not shown.
BIN
pgo_profile/default.profdatabackup3
Normal file
BIN
pgo_profile/default.profdatabackup3
Normal file
Binary file not shown.
Binary file not shown.
BIN
pgo_profile/default_9725750769337483397_0.profraw
Normal file
BIN
pgo_profile/default_9725750769337483397_0.profraw
Normal file
Binary file not shown.
BIN
pgo_profile/default_9725923726611433605_0.profraw
Normal file
BIN
pgo_profile/default_9725923726611433605_0.profraw
Normal file
Binary file not shown.
BIN
pgo_profile/default_9726420327935033477_0.profraw
Normal file
BIN
pgo_profile/default_9726420327935033477_0.profraw
Normal file
Binary file not shown.
Reference in New Issue
Block a user