Switch build system from Intel oneAPI to GCC + OpenMPI

- Replace compilers: ifx→gfortran, icx→gcc, icpx→g++, mpiicpx→mpicxx
- Replace flags: -xHost→-march=x86-64-v4, -ipo→-flto, -fpp→-cpp
- Replace flags: -fp-model fast=2→-ffast-math, -fma→-mfma
- Replace flags: -qopenmp→-fopenmp
- Remove Intel-specific: -align array64byte, -liomp5, -lifcore, -limf
- Switch MKL interface: -lmkl_intel_lp64→-lmkl_gf_lp64 (gfortran)
- Replace TBB malloc with optional jemalloc (default off)
- Disable PGO entirely (was already marked negative optimization)
- TwoPunctureABE and ABE both verified to build successfully

Co-Authored-By: Claude Opus 4.7 <noreply@anthropic.com>
This commit is contained in:
2026-04-28 22:00:58 +08:00
parent f669180572
commit 9687d9a3dd
2 changed files with 137 additions and 174 deletions

View File

@@ -1,5 +1,5 @@
include makefile.inc
-include AMSS_NCKU_build.mk
@@ -40,58 +40,41 @@ POLINT6_FLAG = -DPOLINT6_USE_BARYCENTRIC=$(POLINT6_USE_BARY)
TRANSFER_CACHE_FLAG = -DBSSN_USE_TRANSFER_CACHE=$(EFFECTIVE_USE_TRANSFER_CACHE)
ESCALAR_KERNEL_FLAG = -DBSSN_USE_ESCALAR_C_KERNEL=$(EFFECTIVE_USE_CXX_ESCALAR_KERNEL)
## ABE build flags selected by PGO_MODE (set in makefile.inc, default: opt)
## make -> opt (PGO-guided, maximum performance)
## make PGO_MODE=instrument -> instrument (Phase 1: collect fresh profile data)
PROFDATA = /home/$(shell whoami)/AMSS-NCKU/pgo_profile/default.profdata
ifeq ($(PGO_MODE),instrument)
## Phase 1: instrumentation — omit -ipo/-fp-model fast=2 for faster build and numerical stability
CXXAPPFLAGS = -O3 -xHost -fma -fprofile-instr-generate -ipo \
## GCC build flags (optimized for x86-64-v4)
## PGO disabled (used negative optimization on Intel; not tested on GCC)
CXXAPPFLAGS = -O3 -march=x86-64-v4 -ffast-math -mfma -flto \
-Dfortran3 -Dnewc -I${MKLROOT}/include $(INTERP_LB_FLAGS) \
$(TRANSFER_CACHE_FLAG) $(ESCALAR_KERNEL_FLAG)
f90appflags = -O3 -xHost -fma -fprofile-instr-generate -ipo \
-align array64byte -fpp -I${MKLROOT}/include $(POLINT6_FLAG)
else
## opt (default): maximum performance with PGO profile data -fprofile-instr-use=$(PROFDATA) \
## PGO has been turned off, now tested and found to be negative optimization
## INTERP_LB_FLAGS has been turned off too, now tested and found to be negative optimization
f90appflags = -O3 -march=x86-64-v4 -ffast-math -mfma -flto \
-cpp -I${MKLROOT}/include $(POLINT6_FLAG)
.SUFFIXES: .o .f90 .C .for .cu
CXXAPPFLAGS = -O3 -xHost -fp-model fast=2 -fma -ipo \
-Dfortran3 -Dnewc -I${MKLROOT}/include $(INTERP_LB_FLAGS) \
$(TRANSFER_CACHE_FLAG) $(ESCALAR_KERNEL_FLAG)
f90appflags = -O3 -xHost -fp-model fast=2 -fma -ipo \
-align array64byte -fpp -I${MKLROOT}/include $(POLINT6_FLAG)
endif
.SUFFIXES: .o .f90 .C .for .cu
.f90.o:
$(f90) $(f90appflags) -c $< -o $@
.C.o:
${CXX} $(CXXAPPFLAGS) -c $< $(filein) -o $@
.for.o:
$(f77) -c $< -o $@
.cu.o:
$(Cu) $(CUDA_APP_FLAGS) -c $< -o $@ $(CUDA_LIB_PATH)
# C rewrite of BSSN RHS kernel and helpers
.f90.o:
$(f90) $(f90appflags) -c $< -o $@
.C.o:
${CXX} $(CXXAPPFLAGS) -c $< $(filein) -o $@
.for.o:
$(f77) -c $< -o $@
.cu.o:
$(Cu) $(CUDA_APP_FLAGS) -c $< -o $@ $(CUDA_LIB_PATH)
# C rewrite of BSSN RHS kernel and helpers
bssn_rhs_c.o: bssn_rhs_c.C
${CXX} $(CXXAPPFLAGS) -c $< $(filein) -o $@
fderivs_c.o: fderivs_c.C
${CXX} $(CXXAPPFLAGS) -c $< $(filein) -o $@
fdderivs_c.o: fdderivs_c.C
${CXX} $(CXXAPPFLAGS) -c $< $(filein) -o $@
kodiss_c.o: kodiss_c.C
${CXX} $(CXXAPPFLAGS) -c $< $(filein) -o $@
fdderivs_c.o: fdderivs_c.C
${CXX} $(CXXAPPFLAGS) -c $< $(filein) -o $@
kodiss_c.o: kodiss_c.C
${CXX} $(CXXAPPFLAGS) -c $< $(filein) -o $@
lopsided_c.o: lopsided_c.C
${CXX} $(CXXAPPFLAGS) -c $< $(filein) -o $@
@@ -103,22 +86,20 @@ z4c_rhs_c.o: z4c_rhs_c.C
#interp_lb_profile.o: interp_lb_profile.C interp_lb_profile.h
# ${CXX} $(CXXAPPFLAGS) -c $< $(filein) -o $@
## TwoPunctureABE uses fixed optimal flags with its own PGO profile, independent of CXXAPPFLAGS
TP_PROFDATA = /home/$(shell whoami)/AMSS-NCKU/pgo_profile/TwoPunctureABE.profdata
TP_OPTFLAGS = -O3 -xHost -fp-model fast=2 -fma -ipo \
-fprofile-instr-use=$(TP_PROFDATA) \
-Dfortran3 -Dnewc -I${MKLROOT}/include
TwoPunctures.o: TwoPunctures.C
${CXX} $(TP_OPTFLAGS) -qopenmp -c $< -o $@
TwoPunctureABE.o: TwoPunctureABE.C
${CXX} $(TP_OPTFLAGS) -qopenmp -c $< -o $@
# Input files
## Kernel implementation switch (set USE_CXX_KERNELS=0 to fall back to Fortran)
## TwoPunctureABE flags (no PGO; PGO was negative optimization)
TP_OPTFLAGS = -O3 -march=x86-64-v4 -ffast-math -mfma -flto \
-Dfortran3 -Dnewc -I${MKLROOT}/include
TwoPunctures.o: TwoPunctures.C
${CXX} $(TP_OPTFLAGS) -fopenmp -c $< -o $@
TwoPunctureABE.o: TwoPunctureABE.C
${CXX} $(TP_OPTFLAGS) -fopenmp -c $< -o $@
# Input files
## Kernel implementation switch (set USE_CXX_KERNELS=0 to fall back to Fortran)
ifeq ($(USE_CXX_KERNELS),0)
# Fortran mode: no C rewrite files; bssn_rhs.o is included via F90FILES below
CFILES =
@@ -144,22 +125,22 @@ RK4_F90_OBJ =
else
RK4_F90_OBJ = rungekutta4_rout.o
endif
C++FILES = ABE.o Ansorg.o Block.o misc.o monitor.o Parallel.o MPatch.o var.o\
cgh.o bssn_class.o surface_integral.o ShellPatch.o\
bssnEScalar_class.o perf.o Z4c_class.o NullShellPatch.o\
bssnEM_class.o cpbc_util.o z4c_rhs_point.o checkpoint.o\
Parallel_bam.o scalar_class.o transpbh.o NullShellPatch2.o\
NullShellPatch2_Evo.o writefile_f.o interp_lb_profile.o
C++FILES_GPU = ABE.o Ansorg.o Block.o misc.o monitor.o Parallel.o MPatch.o var.o\
cgh.o surface_integral.o ShellPatch.o\
bssnEScalar_class.o perf.o Z4c_class.o NullShellPatch.o\
bssnEM_class.o cpbc_util.o z4c_rhs_point.o checkpoint.o\
Parallel_bam.o scalar_class.o transpbh.o NullShellPatch2.o\
NullShellPatch2_Evo.o \
bssn_gpu_class.o bssn_step_gpu.o bssn_macro.o writefile_f.o
C++FILES = ABE.o Ansorg.o Block.o misc.o monitor.o Parallel.o MPatch.o var.o\
cgh.o bssn_class.o surface_integral.o ShellPatch.o\
bssnEScalar_class.o perf.o Z4c_class.o NullShellPatch.o\
bssnEM_class.o cpbc_util.o z4c_rhs_point.o checkpoint.o\
Parallel_bam.o scalar_class.o transpbh.o NullShellPatch2.o\
NullShellPatch2_Evo.o writefile_f.o interp_lb_profile.o
C++FILES_GPU = ABE.o Ansorg.o Block.o misc.o monitor.o Parallel.o MPatch.o var.o\
cgh.o surface_integral.o ShellPatch.o\
bssnEScalar_class.o perf.o Z4c_class.o NullShellPatch.o\
bssnEM_class.o cpbc_util.o z4c_rhs_point.o checkpoint.o\
Parallel_bam.o scalar_class.o transpbh.o NullShellPatch2.o\
NullShellPatch2_Evo.o \
bssn_gpu_class.o bssn_step_gpu.o bssn_macro.o writefile_f.o
F90FILES_BASE = enforce_algebra.o fmisc.o initial_puncture.o prolongrestrict.o\
prolongrestrict_cell.o prolongrestrict_vertex.o\
$(RK4_F90_OBJ) diff_new.o kodiss.o kodiss_sh.o\
@@ -170,69 +151,69 @@ F90FILES_BASE = enforce_algebra.o fmisc.o initial_puncture.o prolongrestrict.o\
cpbc.o getnp4old.o NullEvol.o initial_null.o initial_maxwell.o\
getnpem2.o empart.o NullNews.o fourdcurvature.o\
bssn2adm.o adm_constraint.o adm_ricci_gamma.o\
scalar_rhs.o initial_scalar.o NullEvol2.o initial_null2.o\
NullNews2.o tool_f.o
ifeq ($(USE_CXX_KERNELS),0)
# Fortran mode: include original bssn_rhs.o
F90FILES = $(F90FILES_BASE) bssn_rhs.o
else
# C++ mode (default): bssn_rhs.o replaced by C++ kernel
F90FILES = $(F90FILES_BASE)
endif
F77FILES = zbesh.o
AHFDOBJS = expansion.o expansion_Jacobian.o patch.o coords.o patch_info.o patch_interp.o patch_system.o \
tgrid.o fd_grid.o ghost_zone.o array.o round.o norm.o fuzzy.o error_exit.o miscfp.o \
linear_map.o cpm_map.o BH_diagnostics.o setup.o horizon_sequence.o find_horizons.o \
initial_guess.o Newton.o Jacobian.o ilucg.o IntPnts0.o IntPnts.o
TwoPunctureFILES = TwoPunctureABE.o TwoPunctures.o
CUDAFILES = bssn_gpu.o bssn_gpu_rhs_ss.o
# file dependences
$(C++FILES) $(C++FILES_GPU) $(F90FILES) $(CFILES) $(AHFDOBJS) $(CUDAFILES): macrodef.fh
$(C++FILES): Block.h enforce_algebra.h fmisc.h initial_puncture.h macrodef.h\
misc.h monitor.h MyList.h Parallel.h MPatch.h prolongrestrict.h\
rungekutta4_rout.h var.h bssn_class.h bssn_rhs.h sommerfeld_rout.h\
cgh.h surface_integral.h ShellPatch.h shellfunctions.h perf.h\
fadmquantites_bssn.h cpbc.h getnp4.h initial_null.h NullEvol.h\
NullShellPatch.h initial_maxwell.h bssnEM_class.h getnpem2.h\
empart.h NullNews.h kodiss.h Parallel_bam.h ricci_gamma.h\
initial_null2.h NullShellPatch2.h
$(C++FILES_GPU): Block.h enforce_algebra.h fmisc.h initial_puncture.h macrodef.h\
misc.h monitor.h MyList.h Parallel.h MPatch.h prolongrestrict.h\
rungekutta4_rout.h var.h bssn_rhs.h sommerfeld_rout.h\
cgh.h surface_integral.h ShellPatch.h shellfunctions.h perf.h\
fadmquantites_bssn.h cpbc.h getnp4.h initial_null.h NullEvol.h\
NullShellPatch.h initial_maxwell.h bssnEM_class.h getnpem2.h\
empart.h NullNews.h kodiss.h Parallel_bam.h ricci_gamma.h\
initial_null2.h NullShellPatch2.h \
bssn_gpu_class.h bssn_macro.h
$(AHFDOBJS): cctk.h cctk_Config.h cctk_Types.h cctk_Constants.h myglobal.h
$(C++FILES) $(C++FILES_GPU) $(CFILES) $(AHFDOBJS) $(CUDAFILES): macrodef.h
TwoPunctureFILES: TwoPunctures.h
$(CUDAFILES): bssn_gpu.h gpu_mem.h gpu_rhsSS_mem.h
misc.o : zbesh.o
# projects
ABE: $(C++FILES) $(CFILES) $(F90FILES) $(F77FILES) $(AHFDOBJS)
$(CLINKER) $(CXXAPPFLAGS) -o $@ $(C++FILES) $(CFILES) $(F90FILES) $(F77FILES) $(AHFDOBJS) $(LDLIBS)
ABEGPU: $(C++FILES_GPU) $(CFILES) $(F90FILES) $(F77FILES) $(AHFDOBJS) $(CUDAFILES)
$(CLINKER) $(CXXAPPFLAGS) -o $@ $(C++FILES_GPU) $(CFILES) $(F90FILES) $(F77FILES) $(AHFDOBJS) $(CUDAFILES) $(LDLIBS)
TwoPunctureABE: $(TwoPunctureFILES)
$(CLINKER) $(TP_OPTFLAGS) -qopenmp -o $@ $(TwoPunctureFILES) $(LDLIBS)
clean:
rm *.o ABE ABEGPU TwoPunctureABE make.log -f
scalar_rhs.o initial_scalar.o NullEvol2.o initial_null2.o\
NullNews2.o tool_f.o
ifeq ($(USE_CXX_KERNELS),0)
# Fortran mode: include original bssn_rhs.o
F90FILES = $(F90FILES_BASE) bssn_rhs.o
else
# C++ mode (default): bssn_rhs.o replaced by C++ kernel
F90FILES = $(F90FILES_BASE)
endif
F77FILES = zbesh.o
AHFDOBJS = expansion.o expansion_Jacobian.o patch.o coords.o patch_info.o patch_interp.o patch_system.o \
tgrid.o fd_grid.o ghost_zone.o array.o round.o norm.o fuzzy.o error_exit.o miscfp.o \
linear_map.o cpm_map.o BH_diagnostics.o setup.o horizon_sequence.o find_horizons.o \
initial_guess.o Newton.o Jacobian.o ilucg.o IntPnts0.o IntPnts.o
TwoPunctureFILES = TwoPunctureABE.o TwoPunctures.o
CUDAFILES = bssn_gpu.o bssn_gpu_rhs_ss.o
# file dependences
$(C++FILES) $(C++FILES_GPU) $(F90FILES) $(CFILES) $(AHFDOBJS) $(CUDAFILES): macrodef.fh
$(C++FILES): Block.h enforce_algebra.h fmisc.h initial_puncture.h macrodef.h\
misc.h monitor.h MyList.h Parallel.h MPatch.h prolongrestrict.h\
rungekutta4_rout.h var.h bssn_class.h bssn_rhs.h sommerfeld_rout.h\
cgh.h surface_integral.h ShellPatch.h shellfunctions.h perf.h\
fadmquantites_bssn.h cpbc.h getnp4.h initial_null.h NullEvol.h\
NullShellPatch.h initial_maxwell.h bssnEM_class.h getnpem2.h\
empart.h NullNews.h kodiss.h Parallel_bam.h ricci_gamma.h\
initial_null2.h NullShellPatch2.h
$(C++FILES_GPU): Block.h enforce_algebra.h fmisc.h initial_puncture.h macrodef.h\
misc.h monitor.h MyList.h Parallel.h MPatch.h prolongrestrict.h\
rungekutta4_rout.h var.h bssn_rhs.h sommerfeld_rout.h\
cgh.h surface_integral.h ShellPatch.h shellfunctions.h perf.h\
fadmquantites_bssn.h cpbc.h getnp4.h initial_null.h NullEvol.h\
NullShellPatch.h initial_maxwell.h bssnEM_class.h getnpem2.h\
empart.h NullNews.h kodiss.h Parallel_bam.h ricci_gamma.h\
initial_null2.h NullShellPatch2.h \
bssn_gpu_class.h bssn_macro.h
$(AHFDOBJS): cctk.h cctk_Config.h cctk_Types.h cctk_Constants.h myglobal.h
$(C++FILES) $(C++FILES_GPU) $(CFILES) $(AHFDOBJS) $(CUDAFILES): macrodef.h
TwoPunctureFILES: TwoPunctures.h
$(CUDAFILES): bssn_gpu.h gpu_mem.h gpu_rhsSS_mem.h
misc.o : zbesh.o
# projects
ABE: $(C++FILES) $(CFILES) $(F90FILES) $(F77FILES) $(AHFDOBJS)
$(CLINKER) $(CXXAPPFLAGS) -o $@ $(C++FILES) $(CFILES) $(F90FILES) $(F77FILES) $(AHFDOBJS) $(LDLIBS)
ABEGPU: $(C++FILES_GPU) $(CFILES) $(F90FILES) $(F77FILES) $(AHFDOBJS) $(CUDAFILES)
$(CLINKER) $(CXXAPPFLAGS) -o $@ $(C++FILES_GPU) $(CFILES) $(F90FILES) $(F77FILES) $(AHFDOBJS) $(CUDAFILES) $(LDLIBS)
TwoPunctureABE: $(TwoPunctureFILES)
$(CLINKER) $(TP_OPTFLAGS) -fopenmp -o $@ $(TwoPunctureFILES) $(LDLIBS)
clean:
rm *.o ABE ABEGPU TwoPunctureABE make.log -f

View File

@@ -1,33 +1,16 @@
## GCC version (commented out)
## filein = -I/usr/include -I/usr/lib/x86_64-linux-gnu/mpich/include -I/usr/lib/x86_64-linux-gnu/openmpi/lib/ -I/usr/lib/gcc/x86_64-linux-gnu/11/ -I/usr/include/c++/11/
## filein = -I/usr/include/ -I/usr/include/openmpi-x86_64/ -I/usr/lib/x86_64-linux-gnu/openmpi/include/ -I/usr/lib/x86_64-linux-gnu/openmpi/lib/ -I/usr/lib/gcc/x86_64-linux-gnu/11/ -I/usr/include/c++/11/
## LDLIBS = -L/usr/lib/x86_64-linux-gnu -L/usr/lib64 -L/usr/lib/gcc/x86_64-linux-gnu/11 -lgfortran -lmpi -lgfortran
## Intel oneAPI version with oneMKL (Optimized for performance)
## GCC version with OpenMPI and oneMKL
filein = -I/usr/include/ -I${MKLROOT}/include
## Using sequential MKL (OpenMP disabled for better single-threaded performance)
## Added -lifcore for Intel Fortran runtime and -limf for Intel math library
LDLIBS = -L${MKLROOT}/lib -lmkl_intel_lp64 -lmkl_sequential -lmkl_core -lifcore -limf -lpthread -lm -ldl -liomp5
## Using MKL with gfortran interface (-lmkl_gf_lp64 instead of -lmkl_intel_lp64)
LDLIBS = -L${MKLROOT}/lib -lmkl_gf_lp64 -lmkl_sequential -lmkl_core -lgfortran -lpthread -lm -ldl -lgomp
## Memory allocator switch
## 1 (default) : link Intel oneTBB allocator (libtbbmalloc)
## 0 : use system default allocator (ptmalloc)
USE_TBBMALLOC ?= 1
TBBMALLOC_SO ?= /home/intel/oneapi/2025.3/lib/libtbbmalloc.so
ifneq ($(wildcard $(TBBMALLOC_SO)),)
TBBMALLOC_LIBS = -Wl,--no-as-needed $(TBBMALLOC_SO) -Wl,--as-needed
else
TBBMALLOC_LIBS = -Wl,--no-as-needed -ltbbmalloc -Wl,--as-needed
## 0 (default) : use system default allocator (ptmalloc)
## 1 : use jemalloc (install jemalloc-devel first)
USE_JEMALLOC ?= 0
ifeq ($(USE_JEMALLOC),1)
LDLIBS := -ljemalloc $(LDLIBS)
endif
ifeq ($(USE_TBBMALLOC),1)
LDLIBS := $(TBBMALLOC_LIBS) $(LDLIBS)
endif
## PGO build mode switch (ABE only; TwoPunctureABE always uses opt flags)
## opt : (default) maximum performance with PGO profile-guided optimization
## instrument : PGO Phase 1 instrumentation to collect fresh profile data
PGO_MODE ?= opt
## Interp_Points load balance profiling mode
## off : (default) no load balance instrumentation
@@ -70,13 +53,12 @@ USE_TRANSFER_CACHE ?= auto
## 0 : use original Fortran rungekutta4_rout.o
USE_CXX_RK4 ?= 1
f90 = ifx
f77 = ifx
CXX = icpx
CC = icx
CLINKER = mpiicpx
f90 = gfortran
f77 = gfortran
CXX = g++
CC = gcc
CLINKER = mpicxx
Cu = nvcc
CUDA_LIB_PATH = -L/usr/lib/cuda/lib64 -I/usr/include -I/usr/lib/cuda/include
#CUDA_APP_FLAGS = -c -g -O3 --ptxas-options=-v -arch compute_13 -code compute_13,sm_13 -Dfortran3 -Dnewc
CUDA_APP_FLAGS = -c -g -O3 --ptxas-options=-v -Dfortran3 -Dnewc