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##################################################################
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##
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## AMSS-NCKU ABE Test Program (Skip TwoPuncture if data exists)
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## Modified from AMSS_NCKU_Program.py
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## Author: Xiaoqu
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## Modified: 2026/02/01
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##
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##################################################################
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##################################################################
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## Print program introduction
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import print_information
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print_information.print_program_introduction()
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##################################################################
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import AMSS_NCKU_Input as input_data
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##################################################################
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## Create directories to store program run data
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import os
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import shutil
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import sys
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import time
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## Set the output directory according to the input file
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File_directory = os.path.join(input_data.File_directory)
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## Check if output directory exists and if TwoPuncture data is available
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#skip_twopuncture = False
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skip_twopuncture = True
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output_directory = os.path.join(File_directory, "AMSS_NCKU_output")
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binary_results_directory = os.path.join(output_directory, input_data.Output_directory)
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if os.path.exists(File_directory):
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print( " Output directory already exists." )
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print()
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'''
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# Check if TwoPuncture initial data files exist
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if (input_data.Initial_Data_Method == "Ansorg-TwoPuncture"):
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twopuncture_output = os.path.join(output_directory, "TwoPunctureABE")
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input_par = os.path.join(output_directory, "input.par")
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if os.path.exists(twopuncture_output) and os.path.exists(input_par):
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print( " Found existing TwoPuncture initial data." )
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print( " Do you want to skip TwoPuncture phase and reuse existing data?" )
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print( " Input 'skip' to skip TwoPuncture and start ABE directly" )
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print( " Input 'regenerate' to regenerate everything from scratch" )
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print()
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while True:
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try:
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inputvalue = input()
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if ( inputvalue == "skip" ):
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print( " Skipping TwoPuncture phase, will reuse existing initial data." )
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print()
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skip_twopuncture = True
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break
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elif ( inputvalue == "regenerate" ):
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print( " Regenerating everything from scratch." )
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print()
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skip_twopuncture = False
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break
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else:
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print( " Please input 'skip' or 'regenerate'." )
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except ValueError:
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print( " Please input 'skip' or 'regenerate'." )
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else:
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print( " TwoPuncture initial data not found, will regenerate everything." )
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print()
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'''
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# If not skipping, remove and recreate directory
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if not skip_twopuncture:
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shutil.rmtree(File_directory, ignore_errors=True)
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os.mkdir(File_directory)
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os.mkdir(output_directory)
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os.mkdir(binary_results_directory)
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figure_directory = os.path.join(File_directory, "figure")
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os.mkdir(figure_directory)
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shutil.copy("AMSS_NCKU_Input.py", File_directory)
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print( " Output directory has been regenerated." )
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print()
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else:
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# Create fresh directory structure
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os.mkdir(File_directory)
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shutil.copy("AMSS_NCKU_Input.py", File_directory)
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os.mkdir(output_directory)
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os.mkdir(binary_results_directory)
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figure_directory = os.path.join(File_directory, "figure")
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os.mkdir(figure_directory)
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print( " Output directory has been generated." )
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print()
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# Ensure figure directory exists
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figure_directory = os.path.join(File_directory, "figure")
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if not os.path.exists(figure_directory):
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os.mkdir(figure_directory)
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##################################################################
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## Output related parameter information
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import setup
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## Print and save input parameter information
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setup.print_input_data( File_directory )
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if not skip_twopuncture:
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setup.generate_AMSSNCKU_input()
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setup.print_puncture_information()
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##################################################################
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## Generate AMSS-NCKU program input files based on the configured parameters
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if not skip_twopuncture:
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print()
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print( " Generating the AMSS-NCKU input parfile for the ABE executable." )
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print()
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## Generate cgh-related input files from the grid information
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import numerical_grid
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numerical_grid.append_AMSSNCKU_cgh_input()
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print()
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print( " The input parfile for AMSS-NCKU C++ executable file ABE has been generated." )
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print( " However, the input relevant to TwoPuncture need to be appended later." )
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print()
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##################################################################
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## Plot the initial grid configuration
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if not skip_twopuncture:
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print()
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print( " Schematically plot the numerical grid structure." )
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print()
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import numerical_grid
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numerical_grid.plot_initial_grid()
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##################################################################
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## Generate AMSS-NCKU macro files according to the numerical scheme and parameters
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if not skip_twopuncture:
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print()
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print( " Automatically generating the macro file for AMSS-NCKU C++ executable file ABE " )
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print( " (Based on the finite-difference numerical scheme) " )
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print()
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import generate_macrodef
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generate_macrodef.generate_macrodef_h()
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print( " AMSS-NCKU macro file macrodef.h has been generated. " )
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generate_macrodef.generate_macrodef_fh()
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print( " AMSS-NCKU macro file macrodef.fh has been generated. " )
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##################################################################
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# Compile the AMSS-NCKU program according to user requirements
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# NOTE: ABE compilation is always performed, even when skipping TwoPuncture
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print()
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print( " Preparing to compile and run the AMSS-NCKU code as requested " )
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print( " Compiling the AMSS-NCKU code based on the generated macro files " )
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print()
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AMSS_NCKU_source_path = "AMSS_NCKU_source"
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AMSS_NCKU_source_copy = os.path.join(File_directory, "AMSS_NCKU_source_copy")
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## If AMSS_NCKU source folder is missing, create it and prompt the user
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if not os.path.exists(AMSS_NCKU_source_path):
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os.makedirs(AMSS_NCKU_source_path)
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print( " The AMSS-NCKU source files are incomplete; copy all source files into ./AMSS_NCKU_source. " )
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print( " Press Enter to continue. " )
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inputvalue = input()
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# Copy AMSS-NCKU source files to prepare for compilation
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# If skipping TwoPuncture and source_copy already exists, remove it first
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if skip_twopuncture and os.path.exists(AMSS_NCKU_source_copy):
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shutil.rmtree(AMSS_NCKU_source_copy)
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shutil.copytree(AMSS_NCKU_source_path, AMSS_NCKU_source_copy)
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# Copy the generated macro files into the AMSS_NCKU source folder
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if not skip_twopuncture:
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macrodef_h_path = os.path.join(File_directory, "macrodef.h")
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macrodef_fh_path = os.path.join(File_directory, "macrodef.fh")
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else:
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# When skipping TwoPuncture, use existing macro files from previous run
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macrodef_h_path = os.path.join(File_directory, "macrodef.h")
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macrodef_fh_path = os.path.join(File_directory, "macrodef.fh")
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shutil.copy2(macrodef_h_path, AMSS_NCKU_source_copy)
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shutil.copy2(macrodef_fh_path, AMSS_NCKU_source_copy)
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# Compile related programs
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import makefile_and_run
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## Change working directory to the target source copy
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os.chdir(AMSS_NCKU_source_copy)
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## Build the main AMSS-NCKU executable (ABE or ABEGPU)
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makefile_and_run.makefile_ABE()
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## If the initial-data method is Ansorg-TwoPuncture, build the TwoPunctureABE executable
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## Only build TwoPunctureABE if not skipping TwoPuncture phase
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if (input_data.Initial_Data_Method == "Ansorg-TwoPuncture" ) and not skip_twopuncture:
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makefile_and_run.makefile_TwoPunctureABE()
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## Change current working directory back up two levels
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os.chdir('..')
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os.chdir('..')
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print()
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##################################################################
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## Copy the AMSS-NCKU executable (ABE/ABEGPU) to the run directory
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if (input_data.GPU_Calculation == "no"):
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ABE_file = os.path.join(AMSS_NCKU_source_copy, "ABE")
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elif (input_data.GPU_Calculation == "yes"):
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ABE_file = os.path.join(AMSS_NCKU_source_copy, "ABEGPU")
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if not os.path.exists( ABE_file ):
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print()
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print( " Lack of AMSS-NCKU executable file ABE/ABEGPU; recompile AMSS_NCKU_source manually. " )
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print( " When recompilation is finished, press Enter to continue. " )
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inputvalue = input()
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## Copy the executable ABE (or ABEGPU) into the run directory
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shutil.copy2(ABE_file, output_directory)
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## If the initial-data method is TwoPuncture, copy the TwoPunctureABE executable to the run directory
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## Only copy TwoPunctureABE if not skipping TwoPuncture phase
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if (input_data.Initial_Data_Method == "Ansorg-TwoPuncture" ) and not skip_twopuncture:
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TwoPuncture_file = os.path.join(AMSS_NCKU_source_copy, "TwoPunctureABE")
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if not os.path.exists( TwoPuncture_file ):
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print()
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print( " Lack of AMSS-NCKU executable file TwoPunctureABE; recompile TwoPunctureABE in AMSS_NCKU_source. " )
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print( " When recompilation is finished, press Enter to continue. " )
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inputvalue = input()
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## Copy the TwoPunctureABE executable into the run directory
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shutil.copy2(TwoPuncture_file, output_directory)
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##################################################################
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## If the initial-data method is TwoPuncture, generate the TwoPuncture input files
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if (input_data.Initial_Data_Method == "Ansorg-TwoPuncture" ) and not skip_twopuncture:
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print()
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print( " Initial data is chosen as Ansorg-TwoPuncture" )
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print()
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print()
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print( " Automatically generating the input parfile for the TwoPunctureABE executable " )
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print()
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import generate_TwoPuncture_input
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generate_TwoPuncture_input.generate_AMSSNCKU_TwoPuncture_input()
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print()
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print( " The input parfile for the TwoPunctureABE executable has been generated. " )
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print()
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## Generated AMSS-NCKU TwoPuncture input filename
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AMSS_NCKU_TwoPuncture_inputfile = 'AMSS-NCKU-TwoPuncture.input'
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AMSS_NCKU_TwoPuncture_inputfile_path = os.path.join( File_directory, AMSS_NCKU_TwoPuncture_inputfile )
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## Copy and rename the file
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shutil.copy2( AMSS_NCKU_TwoPuncture_inputfile_path, os.path.join(output_directory, 'TwoPunctureinput.par') )
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## Run TwoPuncture to generate initial-data files
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|
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start_time = time.time() # Record start time
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print()
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print()
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|
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## Change to the output (run) directory
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os.chdir(output_directory)
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## Run the TwoPuncture executable
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import makefile_and_run
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makefile_and_run.run_TwoPunctureABE()
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## Change current working directory back up two levels
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|
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os.chdir('..')
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os.chdir('..')
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elif (input_data.Initial_Data_Method == "Ansorg-TwoPuncture" ) and skip_twopuncture:
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print()
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|
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print( " Skipping TwoPuncture execution, using existing initial data." )
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|
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print()
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start_time = time.time() # Record start time for ABE only
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else:
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start_time = time.time() # Record start time
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##################################################################
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## Update puncture data based on TwoPuncture run results
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|
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if not skip_twopuncture:
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import renew_puncture_parameter
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renew_puncture_parameter.append_AMSSNCKU_BSSN_input(File_directory, output_directory)
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||||||
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## Generated AMSS-NCKU input filename
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|
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AMSS_NCKU_inputfile = 'AMSS-NCKU.input'
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AMSS_NCKU_inputfile_path = os.path.join(File_directory, AMSS_NCKU_inputfile)
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## Copy and rename the file
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||||||
shutil.copy2( AMSS_NCKU_inputfile_path, os.path.join(output_directory, 'input.par') )
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||||||
print()
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||||||
print( " Successfully copy all AMSS-NCKU input parfile to target dictionary. " )
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|
||||||
print()
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else:
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|
||||||
print()
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|
||||||
print( " Using existing input.par file from previous run." )
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|
||||||
print()
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|
||||||
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||||||
##################################################################
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|
||||||
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|
||||||
## Launch the AMSS-NCKU program
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|
||||||
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|
||||||
print()
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|
||||||
print()
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|
||||||
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|
||||||
## Change to the run directory
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|
||||||
os.chdir( output_directory )
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|
||||||
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|
||||||
import makefile_and_run
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|
||||||
makefile_and_run.run_ABE()
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|
||||||
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|
||||||
## Change current working directory back up two levels
|
|
||||||
os.chdir('..')
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|
||||||
os.chdir('..')
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|
||||||
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|
||||||
end_time = time.time()
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|
||||||
elapsed_time = end_time - start_time
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|
||||||
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|
||||||
##################################################################
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|
||||||
|
|
||||||
## Copy some basic input and log files out to facilitate debugging
|
|
||||||
|
|
||||||
## Path to the file that stores calculation settings
|
|
||||||
AMSS_NCKU_error_file_path = os.path.join(binary_results_directory, "setting.par")
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|
||||||
## Copy and rename the file for easier inspection
|
|
||||||
shutil.copy( AMSS_NCKU_error_file_path, os.path.join(output_directory, "AMSSNCKU_setting_parameter") )
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|
||||||
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|
||||||
## Path to the error log file
|
|
||||||
AMSS_NCKU_error_file_path = os.path.join(binary_results_directory, "Error.log")
|
|
||||||
## Copy and rename the error log
|
|
||||||
shutil.copy( AMSS_NCKU_error_file_path, os.path.join(output_directory, "Error.log") )
|
|
||||||
|
|
||||||
## Primary program outputs
|
|
||||||
AMSS_NCKU_BH_data = os.path.join(binary_results_directory, "bssn_BH.dat" )
|
|
||||||
AMSS_NCKU_ADM_data = os.path.join(binary_results_directory, "bssn_ADMQs.dat" )
|
|
||||||
AMSS_NCKU_psi4_data = os.path.join(binary_results_directory, "bssn_psi4.dat" )
|
|
||||||
AMSS_NCKU_constraint_data = os.path.join(binary_results_directory, "bssn_constraint.dat")
|
|
||||||
## copy and rename the file
|
|
||||||
shutil.copy( AMSS_NCKU_BH_data, os.path.join(output_directory, "bssn_BH.dat" ) )
|
|
||||||
shutil.copy( AMSS_NCKU_ADM_data, os.path.join(output_directory, "bssn_ADMQs.dat" ) )
|
|
||||||
shutil.copy( AMSS_NCKU_psi4_data, os.path.join(output_directory, "bssn_psi4.dat" ) )
|
|
||||||
shutil.copy( AMSS_NCKU_constraint_data, os.path.join(output_directory, "bssn_constraint.dat") )
|
|
||||||
|
|
||||||
## Additional program outputs
|
|
||||||
if (input_data.Equation_Class == "BSSN-EM"):
|
|
||||||
AMSS_NCKU_phi1_data = os.path.join(binary_results_directory, "bssn_phi1.dat" )
|
|
||||||
AMSS_NCKU_phi2_data = os.path.join(binary_results_directory, "bssn_phi2.dat" )
|
|
||||||
shutil.copy( AMSS_NCKU_phi1_data, os.path.join(output_directory, "bssn_phi1.dat" ) )
|
|
||||||
shutil.copy( AMSS_NCKU_phi2_data, os.path.join(output_directory, "bssn_phi2.dat" ) )
|
|
||||||
elif (input_data.Equation_Class == "BSSN-EScalar"):
|
|
||||||
AMSS_NCKU_maxs_data = os.path.join(binary_results_directory, "bssn_maxs.dat" )
|
|
||||||
shutil.copy( AMSS_NCKU_maxs_data, os.path.join(output_directory, "bssn_maxs.dat" ) )
|
|
||||||
|
|
||||||
##################################################################
|
|
||||||
|
|
||||||
## Plot the AMSS-NCKU program results
|
|
||||||
|
|
||||||
print()
|
|
||||||
print( " Plotting the txt and binary results data from the AMSS-NCKU simulation " )
|
|
||||||
print()
|
|
||||||
|
|
||||||
|
|
||||||
import plot_xiaoqu
|
|
||||||
import plot_GW_strain_amplitude_xiaoqu
|
|
||||||
|
|
||||||
## Plot black hole trajectory
|
|
||||||
plot_xiaoqu.generate_puncture_orbit_plot( binary_results_directory, figure_directory )
|
|
||||||
plot_xiaoqu.generate_puncture_orbit_plot3D( binary_results_directory, figure_directory )
|
|
||||||
|
|
||||||
## Plot black hole separation vs. time
|
|
||||||
plot_xiaoqu.generate_puncture_distence_plot( binary_results_directory, figure_directory )
|
|
||||||
|
|
||||||
## Plot gravitational waveforms (psi4 and strain amplitude)
|
|
||||||
for i in range(input_data.Detector_Number):
|
|
||||||
plot_xiaoqu.generate_gravitational_wave_psi4_plot( binary_results_directory, figure_directory, i )
|
|
||||||
plot_GW_strain_amplitude_xiaoqu.generate_gravitational_wave_amplitude_plot( binary_results_directory, figure_directory, i )
|
|
||||||
|
|
||||||
## Plot ADM mass evolution
|
|
||||||
for i in range(input_data.Detector_Number):
|
|
||||||
plot_xiaoqu.generate_ADMmass_plot( binary_results_directory, figure_directory, i )
|
|
||||||
|
|
||||||
## Plot Hamiltonian constraint violation over time
|
|
||||||
for i in range(input_data.grid_level):
|
|
||||||
plot_xiaoqu.generate_constraint_check_plot( binary_results_directory, figure_directory, i )
|
|
||||||
|
|
||||||
## Plot stored binary data
|
|
||||||
plot_xiaoqu.generate_binary_data_plot( binary_results_directory, figure_directory )
|
|
||||||
|
|
||||||
print()
|
|
||||||
print( f" This Program Cost = {elapsed_time} Seconds " )
|
|
||||||
print()
|
|
||||||
|
|
||||||
|
|
||||||
##################################################################
|
|
||||||
|
|
||||||
print()
|
|
||||||
print( " The AMSS-NCKU-Python simulation is successfully finished, thanks for using !!! " )
|
|
||||||
print()
|
|
||||||
|
|
||||||
##################################################################
|
|
||||||
|
|
||||||
|
|
||||||
@@ -8,6 +8,14 @@
|
|||||||
##
|
##
|
||||||
##################################################################
|
##################################################################
|
||||||
|
|
||||||
|
## Guard against re-execution by multiprocessing child processes.
|
||||||
|
## Without this, using 'spawn' or 'forkserver' context would cause every
|
||||||
|
## worker to re-run the entire script, spawning exponentially more
|
||||||
|
## workers (fork bomb).
|
||||||
|
if __name__ != '__main__':
|
||||||
|
import sys as _sys
|
||||||
|
_sys.exit(0)
|
||||||
|
|
||||||
|
|
||||||
##################################################################
|
##################################################################
|
||||||
|
|
||||||
@@ -424,26 +432,31 @@ print(
|
|||||||
|
|
||||||
import plot_xiaoqu
|
import plot_xiaoqu
|
||||||
import plot_GW_strain_amplitude_xiaoqu
|
import plot_GW_strain_amplitude_xiaoqu
|
||||||
|
from parallel_plot_helper import run_plot_tasks_parallel
|
||||||
|
|
||||||
|
plot_tasks = []
|
||||||
|
|
||||||
## Plot black hole trajectory
|
## Plot black hole trajectory
|
||||||
plot_xiaoqu.generate_puncture_orbit_plot( binary_results_directory, figure_directory )
|
plot_tasks.append( ( plot_xiaoqu.generate_puncture_orbit_plot, (binary_results_directory, figure_directory) ) )
|
||||||
plot_xiaoqu.generate_puncture_orbit_plot3D( binary_results_directory, figure_directory )
|
plot_tasks.append( ( plot_xiaoqu.generate_puncture_orbit_plot3D, (binary_results_directory, figure_directory) ) )
|
||||||
|
|
||||||
## Plot black hole separation vs. time
|
## Plot black hole separation vs. time
|
||||||
plot_xiaoqu.generate_puncture_distence_plot( binary_results_directory, figure_directory )
|
plot_tasks.append( ( plot_xiaoqu.generate_puncture_distence_plot, (binary_results_directory, figure_directory) ) )
|
||||||
|
|
||||||
## Plot gravitational waveforms (psi4 and strain amplitude)
|
## Plot gravitational waveforms (psi4 and strain amplitude)
|
||||||
for i in range(input_data.Detector_Number):
|
for i in range(input_data.Detector_Number):
|
||||||
plot_xiaoqu.generate_gravitational_wave_psi4_plot( binary_results_directory, figure_directory, i )
|
plot_tasks.append( ( plot_xiaoqu.generate_gravitational_wave_psi4_plot, (binary_results_directory, figure_directory, i) ) )
|
||||||
plot_GW_strain_amplitude_xiaoqu.generate_gravitational_wave_amplitude_plot( binary_results_directory, figure_directory, i )
|
plot_tasks.append( ( plot_GW_strain_amplitude_xiaoqu.generate_gravitational_wave_amplitude_plot, (binary_results_directory, figure_directory, i) ) )
|
||||||
|
|
||||||
## Plot ADM mass evolution
|
## Plot ADM mass evolution
|
||||||
for i in range(input_data.Detector_Number):
|
for i in range(input_data.Detector_Number):
|
||||||
plot_xiaoqu.generate_ADMmass_plot( binary_results_directory, figure_directory, i )
|
plot_tasks.append( ( plot_xiaoqu.generate_ADMmass_plot, (binary_results_directory, figure_directory, i) ) )
|
||||||
|
|
||||||
## Plot Hamiltonian constraint violation over time
|
## Plot Hamiltonian constraint violation over time
|
||||||
for i in range(input_data.grid_level):
|
for i in range(input_data.grid_level):
|
||||||
plot_xiaoqu.generate_constraint_check_plot( binary_results_directory, figure_directory, i )
|
plot_tasks.append( ( plot_xiaoqu.generate_constraint_check_plot, (binary_results_directory, figure_directory, i) ) )
|
||||||
|
|
||||||
|
run_plot_tasks_parallel(plot_tasks)
|
||||||
|
|
||||||
## Plot stored binary data
|
## Plot stored binary data
|
||||||
plot_xiaoqu.generate_binary_data_plot( binary_results_directory, figure_directory )
|
plot_xiaoqu.generate_binary_data_plot( binary_results_directory, figure_directory )
|
||||||
|
|||||||
@@ -341,8 +341,9 @@ void Patch::Interp_Points(MyList<var> *VarList,
|
|||||||
double *Shellf, int Symmetry)
|
double *Shellf, int Symmetry)
|
||||||
{
|
{
|
||||||
// NOTE: we do not Synchnize variables here, make sure of that before calling this routine
|
// NOTE: we do not Synchnize variables here, make sure of that before calling this routine
|
||||||
int myrank;
|
int myrank, nprocs;
|
||||||
MPI_Comm_rank(MPI_COMM_WORLD, &myrank);
|
MPI_Comm_rank(MPI_COMM_WORLD, &myrank);
|
||||||
|
MPI_Comm_size(MPI_COMM_WORLD, &nprocs);
|
||||||
|
|
||||||
int ordn = 2 * ghost_width;
|
int ordn = 2 * ghost_width;
|
||||||
MyList<var> *varl;
|
MyList<var> *varl;
|
||||||
@@ -354,24 +355,18 @@ void Patch::Interp_Points(MyList<var> *VarList,
|
|||||||
varl = varl->next;
|
varl = varl->next;
|
||||||
}
|
}
|
||||||
|
|
||||||
double *shellf;
|
memset(Shellf, 0, sizeof(double) * NN * num_var);
|
||||||
shellf = new double[NN * num_var];
|
|
||||||
memset(shellf, 0, sizeof(double) * NN * num_var);
|
|
||||||
|
|
||||||
// we use weight to monitor code, later some day we can move it for optimization
|
// owner_rank[j] records which MPI rank owns point j
|
||||||
int *weight;
|
// All ranks traverse the same block list so they all agree on ownership
|
||||||
weight = new int[NN];
|
int *owner_rank;
|
||||||
memset(weight, 0, sizeof(int) * NN);
|
owner_rank = new int[NN];
|
||||||
|
for (int j = 0; j < NN; j++)
|
||||||
double *DH, *llb, *uub;
|
owner_rank[j] = -1;
|
||||||
DH = new double[dim];
|
|
||||||
|
|
||||||
|
double DH[dim], llb[dim], uub[dim];
|
||||||
for (int i = 0; i < dim; i++)
|
for (int i = 0; i < dim; i++)
|
||||||
{
|
|
||||||
DH[i] = getdX(i);
|
DH[i] = getdX(i);
|
||||||
}
|
|
||||||
llb = new double[dim];
|
|
||||||
uub = new double[dim];
|
|
||||||
|
|
||||||
for (int j = 0; j < NN; j++) // run along points
|
for (int j = 0; j < NN; j++) // run along points
|
||||||
{
|
{
|
||||||
@@ -403,12 +398,6 @@ void Patch::Interp_Points(MyList<var> *VarList,
|
|||||||
bool flag = true;
|
bool flag = true;
|
||||||
for (int i = 0; i < dim; i++)
|
for (int i = 0; i < dim; i++)
|
||||||
{
|
{
|
||||||
// NOTE: our dividing structure is (exclude ghost)
|
|
||||||
// -1 0
|
|
||||||
// 1 2
|
|
||||||
// so (0,1) does not belong to any part for vertex structure
|
|
||||||
// here we put (0,0.5) to left part and (0.5,1) to right part
|
|
||||||
// BUT for cell structure the bbox is (-1.5,0.5) and (0.5,2.5), there is no missing region at all
|
|
||||||
#ifdef Vertex
|
#ifdef Vertex
|
||||||
#ifdef Cell
|
#ifdef Cell
|
||||||
#error Both Cell and Vertex are defined
|
#error Both Cell and Vertex are defined
|
||||||
@@ -433,6 +422,7 @@ void Patch::Interp_Points(MyList<var> *VarList,
|
|||||||
if (flag)
|
if (flag)
|
||||||
{
|
{
|
||||||
notfind = false;
|
notfind = false;
|
||||||
|
owner_rank[j] = BP->rank;
|
||||||
if (myrank == BP->rank)
|
if (myrank == BP->rank)
|
||||||
{
|
{
|
||||||
//---> interpolation
|
//---> interpolation
|
||||||
@@ -440,14 +430,11 @@ void Patch::Interp_Points(MyList<var> *VarList,
|
|||||||
int k = 0;
|
int k = 0;
|
||||||
while (varl) // run along variables
|
while (varl) // run along variables
|
||||||
{
|
{
|
||||||
// shellf[j*num_var+k] = Parallel::global_interp(dim,BP->shape,BP->X,BP->fgfs[varl->data->sgfn],
|
f_global_interp(BP->shape, BP->X[0], BP->X[1], BP->X[2], BP->fgfs[varl->data->sgfn], Shellf[j * num_var + k],
|
||||||
// pox,ordn,varl->data->SoA,Symmetry);
|
|
||||||
f_global_interp(BP->shape, BP->X[0], BP->X[1], BP->X[2], BP->fgfs[varl->data->sgfn], shellf[j * num_var + k],
|
|
||||||
pox[0], pox[1], pox[2], ordn, varl->data->SoA, Symmetry);
|
pox[0], pox[1], pox[2], ordn, varl->data->SoA, Symmetry);
|
||||||
varl = varl->next;
|
varl = varl->next;
|
||||||
k++;
|
k++;
|
||||||
}
|
}
|
||||||
weight[j] = 1;
|
|
||||||
}
|
}
|
||||||
}
|
}
|
||||||
if (Bp == ble)
|
if (Bp == ble)
|
||||||
@@ -456,103 +443,327 @@ void Patch::Interp_Points(MyList<var> *VarList,
|
|||||||
}
|
}
|
||||||
}
|
}
|
||||||
|
|
||||||
MPI_Allreduce(shellf, Shellf, NN * num_var, MPI_DOUBLE, MPI_SUM, MPI_COMM_WORLD);
|
// Replace MPI_Allreduce with per-owner MPI_Bcast:
|
||||||
int *Weight;
|
// Group consecutive points by owner rank and broadcast each group.
|
||||||
Weight = new int[NN];
|
// Since each point's data is non-zero only on the owner rank,
|
||||||
MPI_Allreduce(weight, Weight, NN, MPI_INT, MPI_SUM, MPI_COMM_WORLD);
|
// Bcast from owner is equivalent to Allreduce(MPI_SUM) but much cheaper.
|
||||||
|
|
||||||
// misc::tillherecheck("print me");
|
|
||||||
|
|
||||||
for (int i = 0; i < NN; i++)
|
|
||||||
{
|
{
|
||||||
if (Weight[i] > 1)
|
int j = 0;
|
||||||
|
while (j < NN)
|
||||||
{
|
{
|
||||||
if (myrank == 0)
|
int cur_owner = owner_rank[j];
|
||||||
cout << "WARNING: Patch::Interp_Points meets multiple weight" << endl;
|
if (cur_owner < 0)
|
||||||
for (int j = 0; j < num_var; j++)
|
{
|
||||||
Shellf[j + i * num_var] = Shellf[j + i * num_var] / Weight[i];
|
if (myrank == 0)
|
||||||
|
{
|
||||||
|
cout << "ERROR: Patch::Interp_Points fails to find point (";
|
||||||
|
for (int d = 0; d < dim; d++)
|
||||||
|
{
|
||||||
|
cout << XX[d][j];
|
||||||
|
if (d < dim - 1)
|
||||||
|
cout << ",";
|
||||||
|
else
|
||||||
|
cout << ")";
|
||||||
|
}
|
||||||
|
cout << " on Patch (";
|
||||||
|
for (int d = 0; d < dim; d++)
|
||||||
|
{
|
||||||
|
cout << bbox[d] << "+" << lli[d] * DH[d];
|
||||||
|
if (d < dim - 1)
|
||||||
|
cout << ",";
|
||||||
|
else
|
||||||
|
cout << ")--";
|
||||||
|
}
|
||||||
|
cout << "(";
|
||||||
|
for (int d = 0; d < dim; d++)
|
||||||
|
{
|
||||||
|
cout << bbox[dim + d] << "-" << uui[d] * DH[d];
|
||||||
|
if (d < dim - 1)
|
||||||
|
cout << ",";
|
||||||
|
else
|
||||||
|
cout << ")" << endl;
|
||||||
|
}
|
||||||
|
MPI_Abort(MPI_COMM_WORLD, 1);
|
||||||
|
}
|
||||||
|
j++;
|
||||||
|
continue;
|
||||||
|
}
|
||||||
|
// Find contiguous run of points with the same owner
|
||||||
|
int jstart = j;
|
||||||
|
while (j < NN && owner_rank[j] == cur_owner)
|
||||||
|
j++;
|
||||||
|
int count = (j - jstart) * num_var;
|
||||||
|
MPI_Bcast(Shellf + jstart * num_var, count, MPI_DOUBLE, cur_owner, MPI_COMM_WORLD);
|
||||||
}
|
}
|
||||||
else if (Weight[i] == 0 && myrank == 0)
|
}
|
||||||
|
|
||||||
|
delete[] owner_rank;
|
||||||
|
}
|
||||||
|
void Patch::Interp_Points(MyList<var> *VarList,
|
||||||
|
int NN, double **XX,
|
||||||
|
double *Shellf, int Symmetry,
|
||||||
|
int Nmin_consumer, int Nmax_consumer)
|
||||||
|
{
|
||||||
|
// Targeted point-to-point overload: each owner sends each point only to
|
||||||
|
// the one rank that needs it for integration (consumer), reducing
|
||||||
|
// communication volume by ~nprocs times compared to the Bcast version.
|
||||||
|
int myrank, nprocs;
|
||||||
|
MPI_Comm_rank(MPI_COMM_WORLD, &myrank);
|
||||||
|
MPI_Comm_size(MPI_COMM_WORLD, &nprocs);
|
||||||
|
|
||||||
|
int ordn = 2 * ghost_width;
|
||||||
|
MyList<var> *varl;
|
||||||
|
int num_var = 0;
|
||||||
|
varl = VarList;
|
||||||
|
while (varl)
|
||||||
|
{
|
||||||
|
num_var++;
|
||||||
|
varl = varl->next;
|
||||||
|
}
|
||||||
|
|
||||||
|
memset(Shellf, 0, sizeof(double) * NN * num_var);
|
||||||
|
|
||||||
|
// owner_rank[j] records which MPI rank owns point j
|
||||||
|
int *owner_rank;
|
||||||
|
owner_rank = new int[NN];
|
||||||
|
for (int j = 0; j < NN; j++)
|
||||||
|
owner_rank[j] = -1;
|
||||||
|
|
||||||
|
double DH[dim], llb[dim], uub[dim];
|
||||||
|
for (int i = 0; i < dim; i++)
|
||||||
|
DH[i] = getdX(i);
|
||||||
|
|
||||||
|
// --- Interpolation phase (identical to original) ---
|
||||||
|
for (int j = 0; j < NN; j++)
|
||||||
|
{
|
||||||
|
double pox[dim];
|
||||||
|
for (int i = 0; i < dim; i++)
|
||||||
|
{
|
||||||
|
pox[i] = XX[i][j];
|
||||||
|
if (myrank == 0 && (XX[i][j] < bbox[i] + lli[i] * DH[i] || XX[i][j] > bbox[dim + i] - uui[i] * DH[i]))
|
||||||
|
{
|
||||||
|
cout << "Patch::Interp_Points: point (";
|
||||||
|
for (int k = 0; k < dim; k++)
|
||||||
|
{
|
||||||
|
cout << XX[k][j];
|
||||||
|
if (k < dim - 1)
|
||||||
|
cout << ",";
|
||||||
|
else
|
||||||
|
cout << ") is out of current Patch." << endl;
|
||||||
|
}
|
||||||
|
MPI_Abort(MPI_COMM_WORLD, 1);
|
||||||
|
}
|
||||||
|
}
|
||||||
|
|
||||||
|
MyList<Block> *Bp = blb;
|
||||||
|
bool notfind = true;
|
||||||
|
while (notfind && Bp)
|
||||||
|
{
|
||||||
|
Block *BP = Bp->data;
|
||||||
|
|
||||||
|
bool flag = true;
|
||||||
|
for (int i = 0; i < dim; i++)
|
||||||
|
{
|
||||||
|
#ifdef Vertex
|
||||||
|
#ifdef Cell
|
||||||
|
#error Both Cell and Vertex are defined
|
||||||
|
#endif
|
||||||
|
llb[i] = (feq(BP->bbox[i], bbox[i], DH[i] / 2)) ? BP->bbox[i] + lli[i] * DH[i] : BP->bbox[i] + (ghost_width - 0.5) * DH[i];
|
||||||
|
uub[i] = (feq(BP->bbox[dim + i], bbox[dim + i], DH[i] / 2)) ? BP->bbox[dim + i] - uui[i] * DH[i] : BP->bbox[dim + i] - (ghost_width - 0.5) * DH[i];
|
||||||
|
#else
|
||||||
|
#ifdef Cell
|
||||||
|
llb[i] = (feq(BP->bbox[i], bbox[i], DH[i] / 2)) ? BP->bbox[i] + lli[i] * DH[i] : BP->bbox[i] + ghost_width * DH[i];
|
||||||
|
uub[i] = (feq(BP->bbox[dim + i], bbox[dim + i], DH[i] / 2)) ? BP->bbox[dim + i] - uui[i] * DH[i] : BP->bbox[dim + i] - ghost_width * DH[i];
|
||||||
|
#else
|
||||||
|
#error Not define Vertex nor Cell
|
||||||
|
#endif
|
||||||
|
#endif
|
||||||
|
if (XX[i][j] - llb[i] < -DH[i] / 2 || XX[i][j] - uub[i] > DH[i] / 2)
|
||||||
|
{
|
||||||
|
flag = false;
|
||||||
|
break;
|
||||||
|
}
|
||||||
|
}
|
||||||
|
|
||||||
|
if (flag)
|
||||||
|
{
|
||||||
|
notfind = false;
|
||||||
|
owner_rank[j] = BP->rank;
|
||||||
|
if (myrank == BP->rank)
|
||||||
|
{
|
||||||
|
varl = VarList;
|
||||||
|
int k = 0;
|
||||||
|
while (varl)
|
||||||
|
{
|
||||||
|
f_global_interp(BP->shape, BP->X[0], BP->X[1], BP->X[2], BP->fgfs[varl->data->sgfn], Shellf[j * num_var + k],
|
||||||
|
pox[0], pox[1], pox[2], ordn, varl->data->SoA, Symmetry);
|
||||||
|
varl = varl->next;
|
||||||
|
k++;
|
||||||
|
}
|
||||||
|
}
|
||||||
|
}
|
||||||
|
if (Bp == ble)
|
||||||
|
break;
|
||||||
|
Bp = Bp->next;
|
||||||
|
}
|
||||||
|
}
|
||||||
|
|
||||||
|
// --- Error check for unfound points ---
|
||||||
|
for (int j = 0; j < NN; j++)
|
||||||
|
{
|
||||||
|
if (owner_rank[j] < 0 && myrank == 0)
|
||||||
{
|
{
|
||||||
cout << "ERROR: Patch::Interp_Points fails to find point (";
|
cout << "ERROR: Patch::Interp_Points fails to find point (";
|
||||||
for (int j = 0; j < dim; j++)
|
for (int d = 0; d < dim; d++)
|
||||||
{
|
{
|
||||||
cout << XX[j][i];
|
cout << XX[d][j];
|
||||||
if (j < dim - 1)
|
if (d < dim - 1)
|
||||||
cout << ",";
|
cout << ",";
|
||||||
else
|
else
|
||||||
cout << ")";
|
cout << ")";
|
||||||
}
|
}
|
||||||
cout << " on Patch (";
|
cout << " on Patch (";
|
||||||
for (int j = 0; j < dim; j++)
|
for (int d = 0; d < dim; d++)
|
||||||
{
|
{
|
||||||
cout << bbox[j] << "+" << lli[j] * getdX(j);
|
cout << bbox[d] << "+" << lli[d] * DH[d];
|
||||||
if (j < dim - 1)
|
if (d < dim - 1)
|
||||||
cout << ",";
|
cout << ",";
|
||||||
else
|
else
|
||||||
cout << ")--";
|
cout << ")--";
|
||||||
}
|
}
|
||||||
cout << "(";
|
cout << "(";
|
||||||
for (int j = 0; j < dim; j++)
|
for (int d = 0; d < dim; d++)
|
||||||
{
|
{
|
||||||
cout << bbox[dim + j] << "-" << uui[j] * getdX(j);
|
cout << bbox[dim + d] << "-" << uui[d] * DH[d];
|
||||||
if (j < dim - 1)
|
if (d < dim - 1)
|
||||||
cout << ",";
|
cout << ",";
|
||||||
else
|
else
|
||||||
cout << ")" << endl;
|
cout << ")" << endl;
|
||||||
}
|
}
|
||||||
#if 0
|
|
||||||
checkBlock();
|
|
||||||
#else
|
|
||||||
cout << "splited domains:" << endl;
|
|
||||||
{
|
|
||||||
MyList<Block> *Bp = blb;
|
|
||||||
while (Bp)
|
|
||||||
{
|
|
||||||
Block *BP = Bp->data;
|
|
||||||
|
|
||||||
for (int i = 0; i < dim; i++)
|
|
||||||
{
|
|
||||||
#ifdef Vertex
|
|
||||||
#ifdef Cell
|
|
||||||
#error Both Cell and Vertex are defined
|
|
||||||
#endif
|
|
||||||
llb[i] = (feq(BP->bbox[i], bbox[i], DH[i] / 2)) ? BP->bbox[i] + lli[i] * DH[i] : BP->bbox[i] + (ghost_width - 0.5) * DH[i];
|
|
||||||
uub[i] = (feq(BP->bbox[dim + i], bbox[dim + i], DH[i] / 2)) ? BP->bbox[dim + i] - uui[i] * DH[i] : BP->bbox[dim + i] - (ghost_width - 0.5) * DH[i];
|
|
||||||
#else
|
|
||||||
#ifdef Cell
|
|
||||||
llb[i] = (feq(BP->bbox[i], bbox[i], DH[i] / 2)) ? BP->bbox[i] + lli[i] * DH[i] : BP->bbox[i] + ghost_width * DH[i];
|
|
||||||
uub[i] = (feq(BP->bbox[dim + i], bbox[dim + i], DH[i] / 2)) ? BP->bbox[dim + i] - uui[i] * DH[i] : BP->bbox[dim + i] - ghost_width * DH[i];
|
|
||||||
#else
|
|
||||||
#error Not define Vertex nor Cell
|
|
||||||
#endif
|
|
||||||
#endif
|
|
||||||
}
|
|
||||||
cout << "(";
|
|
||||||
for (int j = 0; j < dim; j++)
|
|
||||||
{
|
|
||||||
cout << llb[j] << ":" << uub[j];
|
|
||||||
if (j < dim - 1)
|
|
||||||
cout << ",";
|
|
||||||
else
|
|
||||||
cout << ")" << endl;
|
|
||||||
}
|
|
||||||
if (Bp == ble)
|
|
||||||
break;
|
|
||||||
Bp = Bp->next;
|
|
||||||
}
|
|
||||||
}
|
|
||||||
#endif
|
|
||||||
MPI_Abort(MPI_COMM_WORLD, 1);
|
MPI_Abort(MPI_COMM_WORLD, 1);
|
||||||
}
|
}
|
||||||
}
|
}
|
||||||
|
|
||||||
delete[] shellf;
|
// --- Targeted point-to-point communication phase ---
|
||||||
delete[] weight;
|
// Compute consumer_rank[j] using the same deterministic formula as surface_integral
|
||||||
delete[] Weight;
|
int *consumer_rank = new int[NN];
|
||||||
delete[] DH;
|
{
|
||||||
delete[] llb;
|
int mp = NN / nprocs;
|
||||||
delete[] uub;
|
int Lp = NN - nprocs * mp;
|
||||||
|
for (int j = 0; j < NN; j++)
|
||||||
|
{
|
||||||
|
if (j < Lp * (mp + 1))
|
||||||
|
consumer_rank[j] = j / (mp + 1);
|
||||||
|
else
|
||||||
|
consumer_rank[j] = Lp + (j - Lp * (mp + 1)) / mp;
|
||||||
|
}
|
||||||
|
}
|
||||||
|
|
||||||
|
// Count sends and recvs per rank
|
||||||
|
int *send_count = new int[nprocs];
|
||||||
|
int *recv_count = new int[nprocs];
|
||||||
|
memset(send_count, 0, sizeof(int) * nprocs);
|
||||||
|
memset(recv_count, 0, sizeof(int) * nprocs);
|
||||||
|
|
||||||
|
for (int j = 0; j < NN; j++)
|
||||||
|
{
|
||||||
|
int own = owner_rank[j];
|
||||||
|
int con = consumer_rank[j];
|
||||||
|
if (own == con)
|
||||||
|
continue; // local — no communication needed
|
||||||
|
if (own == myrank)
|
||||||
|
send_count[con]++;
|
||||||
|
if (con == myrank)
|
||||||
|
recv_count[own]++;
|
||||||
|
}
|
||||||
|
|
||||||
|
// Build send buffers: for each destination rank, pack (index, data) pairs
|
||||||
|
// Each entry: 1 int (point index j) + num_var doubles
|
||||||
|
int total_send = 0, total_recv = 0;
|
||||||
|
int *send_offset = new int[nprocs];
|
||||||
|
int *recv_offset = new int[nprocs];
|
||||||
|
for (int r = 0; r < nprocs; r++)
|
||||||
|
{
|
||||||
|
send_offset[r] = total_send;
|
||||||
|
total_send += send_count[r];
|
||||||
|
recv_offset[r] = total_recv;
|
||||||
|
total_recv += recv_count[r];
|
||||||
|
}
|
||||||
|
|
||||||
|
// Pack send buffers: each message contains (j, data[0..num_var-1]) per point
|
||||||
|
int stride = 1 + num_var; // 1 double for index + num_var doubles for data
|
||||||
|
double *sendbuf = new double[total_send * stride];
|
||||||
|
double *recvbuf = new double[total_recv * stride];
|
||||||
|
|
||||||
|
// Temporary counters for packing
|
||||||
|
int *pack_pos = new int[nprocs];
|
||||||
|
memset(pack_pos, 0, sizeof(int) * nprocs);
|
||||||
|
|
||||||
|
for (int j = 0; j < NN; j++)
|
||||||
|
{
|
||||||
|
int own = owner_rank[j];
|
||||||
|
int con = consumer_rank[j];
|
||||||
|
if (own != myrank || con == myrank)
|
||||||
|
continue;
|
||||||
|
int pos = (send_offset[con] + pack_pos[con]) * stride;
|
||||||
|
sendbuf[pos] = (double)j; // point index
|
||||||
|
for (int v = 0; v < num_var; v++)
|
||||||
|
sendbuf[pos + 1 + v] = Shellf[j * num_var + v];
|
||||||
|
pack_pos[con]++;
|
||||||
|
}
|
||||||
|
|
||||||
|
// Post non-blocking recvs and sends
|
||||||
|
int n_req = 0;
|
||||||
|
for (int r = 0; r < nprocs; r++)
|
||||||
|
{
|
||||||
|
if (recv_count[r] > 0) n_req++;
|
||||||
|
if (send_count[r] > 0) n_req++;
|
||||||
|
}
|
||||||
|
|
||||||
|
MPI_Request *reqs = new MPI_Request[n_req];
|
||||||
|
int req_idx = 0;
|
||||||
|
|
||||||
|
for (int r = 0; r < nprocs; r++)
|
||||||
|
{
|
||||||
|
if (recv_count[r] > 0)
|
||||||
|
{
|
||||||
|
MPI_Irecv(recvbuf + recv_offset[r] * stride,
|
||||||
|
recv_count[r] * stride, MPI_DOUBLE,
|
||||||
|
r, 0, MPI_COMM_WORLD, &reqs[req_idx++]);
|
||||||
|
}
|
||||||
|
}
|
||||||
|
for (int r = 0; r < nprocs; r++)
|
||||||
|
{
|
||||||
|
if (send_count[r] > 0)
|
||||||
|
{
|
||||||
|
MPI_Isend(sendbuf + send_offset[r] * stride,
|
||||||
|
send_count[r] * stride, MPI_DOUBLE,
|
||||||
|
r, 0, MPI_COMM_WORLD, &reqs[req_idx++]);
|
||||||
|
}
|
||||||
|
}
|
||||||
|
|
||||||
|
if (n_req > 0)
|
||||||
|
MPI_Waitall(n_req, reqs, MPI_STATUSES_IGNORE);
|
||||||
|
|
||||||
|
// Unpack recv buffers into Shellf
|
||||||
|
for (int i = 0; i < total_recv; i++)
|
||||||
|
{
|
||||||
|
int pos = i * stride;
|
||||||
|
int j = (int)recvbuf[pos];
|
||||||
|
for (int v = 0; v < num_var; v++)
|
||||||
|
Shellf[j * num_var + v] = recvbuf[pos + 1 + v];
|
||||||
|
}
|
||||||
|
|
||||||
|
delete[] reqs;
|
||||||
|
delete[] sendbuf;
|
||||||
|
delete[] recvbuf;
|
||||||
|
delete[] pack_pos;
|
||||||
|
delete[] send_offset;
|
||||||
|
delete[] recv_offset;
|
||||||
|
delete[] send_count;
|
||||||
|
delete[] recv_count;
|
||||||
|
delete[] consumer_rank;
|
||||||
|
delete[] owner_rank;
|
||||||
}
|
}
|
||||||
void Patch::Interp_Points(MyList<var> *VarList,
|
void Patch::Interp_Points(MyList<var> *VarList,
|
||||||
int NN, double **XX,
|
int NN, double **XX,
|
||||||
@@ -573,24 +784,22 @@ void Patch::Interp_Points(MyList<var> *VarList,
|
|||||||
varl = varl->next;
|
varl = varl->next;
|
||||||
}
|
}
|
||||||
|
|
||||||
double *shellf;
|
memset(Shellf, 0, sizeof(double) * NN * num_var);
|
||||||
shellf = new double[NN * num_var];
|
|
||||||
memset(shellf, 0, sizeof(double) * NN * num_var);
|
|
||||||
|
|
||||||
// we use weight to monitor code, later some day we can move it for optimization
|
// owner_rank[j] stores the global rank that owns point j
|
||||||
int *weight;
|
int *owner_rank;
|
||||||
weight = new int[NN];
|
owner_rank = new int[NN];
|
||||||
memset(weight, 0, sizeof(int) * NN);
|
for (int j = 0; j < NN; j++)
|
||||||
|
owner_rank[j] = -1;
|
||||||
|
|
||||||
double *DH, *llb, *uub;
|
// Build global-to-local rank translation for Comm_here
|
||||||
DH = new double[dim];
|
MPI_Group world_group, local_group;
|
||||||
|
MPI_Comm_group(MPI_COMM_WORLD, &world_group);
|
||||||
|
MPI_Comm_group(Comm_here, &local_group);
|
||||||
|
|
||||||
|
double DH[dim], llb[dim], uub[dim];
|
||||||
for (int i = 0; i < dim; i++)
|
for (int i = 0; i < dim; i++)
|
||||||
{
|
|
||||||
DH[i] = getdX(i);
|
DH[i] = getdX(i);
|
||||||
}
|
|
||||||
llb = new double[dim];
|
|
||||||
uub = new double[dim];
|
|
||||||
|
|
||||||
for (int j = 0; j < NN; j++) // run along points
|
for (int j = 0; j < NN; j++) // run along points
|
||||||
{
|
{
|
||||||
@@ -622,12 +831,6 @@ void Patch::Interp_Points(MyList<var> *VarList,
|
|||||||
bool flag = true;
|
bool flag = true;
|
||||||
for (int i = 0; i < dim; i++)
|
for (int i = 0; i < dim; i++)
|
||||||
{
|
{
|
||||||
// NOTE: our dividing structure is (exclude ghost)
|
|
||||||
// -1 0
|
|
||||||
// 1 2
|
|
||||||
// so (0,1) does not belong to any part for vertex structure
|
|
||||||
// here we put (0,0.5) to left part and (0.5,1) to right part
|
|
||||||
// BUT for cell structure the bbox is (-1.5,0.5) and (0.5,2.5), there is no missing region at all
|
|
||||||
#ifdef Vertex
|
#ifdef Vertex
|
||||||
#ifdef Cell
|
#ifdef Cell
|
||||||
#error Both Cell and Vertex are defined
|
#error Both Cell and Vertex are defined
|
||||||
@@ -652,6 +855,7 @@ void Patch::Interp_Points(MyList<var> *VarList,
|
|||||||
if (flag)
|
if (flag)
|
||||||
{
|
{
|
||||||
notfind = false;
|
notfind = false;
|
||||||
|
owner_rank[j] = BP->rank;
|
||||||
if (myrank == BP->rank)
|
if (myrank == BP->rank)
|
||||||
{
|
{
|
||||||
//---> interpolation
|
//---> interpolation
|
||||||
@@ -659,14 +863,11 @@ void Patch::Interp_Points(MyList<var> *VarList,
|
|||||||
int k = 0;
|
int k = 0;
|
||||||
while (varl) // run along variables
|
while (varl) // run along variables
|
||||||
{
|
{
|
||||||
// shellf[j*num_var+k] = Parallel::global_interp(dim,BP->shape,BP->X,BP->fgfs[varl->data->sgfn],
|
f_global_interp(BP->shape, BP->X[0], BP->X[1], BP->X[2], BP->fgfs[varl->data->sgfn], Shellf[j * num_var + k],
|
||||||
// pox,ordn,varl->data->SoA,Symmetry);
|
|
||||||
f_global_interp(BP->shape, BP->X[0], BP->X[1], BP->X[2], BP->fgfs[varl->data->sgfn], shellf[j * num_var + k],
|
|
||||||
pox[0], pox[1], pox[2], ordn, varl->data->SoA, Symmetry);
|
pox[0], pox[1], pox[2], ordn, varl->data->SoA, Symmetry);
|
||||||
varl = varl->next;
|
varl = varl->next;
|
||||||
k++;
|
k++;
|
||||||
}
|
}
|
||||||
weight[j] = 1;
|
|
||||||
}
|
}
|
||||||
}
|
}
|
||||||
if (Bp == ble)
|
if (Bp == ble)
|
||||||
@@ -675,97 +876,35 @@ void Patch::Interp_Points(MyList<var> *VarList,
|
|||||||
}
|
}
|
||||||
}
|
}
|
||||||
|
|
||||||
MPI_Allreduce(shellf, Shellf, NN * num_var, MPI_DOUBLE, MPI_SUM, Comm_here);
|
// Collect unique global owner ranks and translate to local ranks in Comm_here
|
||||||
int *Weight;
|
// Then broadcast each owner's points via MPI_Bcast on Comm_here
|
||||||
Weight = new int[NN];
|
|
||||||
MPI_Allreduce(weight, Weight, NN, MPI_INT, MPI_SUM, Comm_here);
|
|
||||||
|
|
||||||
// misc::tillherecheck("print me");
|
|
||||||
// if(lmyrank == 0) cout<<"myrank = "<<myrank<<"print me"<<endl;
|
|
||||||
|
|
||||||
for (int i = 0; i < NN; i++)
|
|
||||||
{
|
{
|
||||||
if (Weight[i] > 1)
|
int j = 0;
|
||||||
|
while (j < NN)
|
||||||
{
|
{
|
||||||
if (lmyrank == 0)
|
int cur_owner_global = owner_rank[j];
|
||||||
cout << "WARNING: Patch::Interp_Points meets multiple weight" << endl;
|
if (cur_owner_global < 0)
|
||||||
for (int j = 0; j < num_var; j++)
|
{
|
||||||
Shellf[j + i * num_var] = Shellf[j + i * num_var] / Weight[i];
|
// Point not found — skip (error check disabled for sub-communicator levels)
|
||||||
|
j++;
|
||||||
|
continue;
|
||||||
|
}
|
||||||
|
// Translate global rank to local rank in Comm_here
|
||||||
|
int cur_owner_local;
|
||||||
|
MPI_Group_translate_ranks(world_group, 1, &cur_owner_global, local_group, &cur_owner_local);
|
||||||
|
|
||||||
|
// Find contiguous run of points with the same owner
|
||||||
|
int jstart = j;
|
||||||
|
while (j < NN && owner_rank[j] == cur_owner_global)
|
||||||
|
j++;
|
||||||
|
int count = (j - jstart) * num_var;
|
||||||
|
MPI_Bcast(Shellf + jstart * num_var, count, MPI_DOUBLE, cur_owner_local, Comm_here);
|
||||||
}
|
}
|
||||||
#if 0 // for not involved levels, this may fail
|
|
||||||
else if(Weight[i] == 0 && lmyrank == 0)
|
|
||||||
{
|
|
||||||
cout<<"ERROR: Patch::Interp_Points fails to find point (";
|
|
||||||
for(int j=0;j<dim;j++)
|
|
||||||
{
|
|
||||||
cout<<XX[j][i];
|
|
||||||
if(j<dim-1) cout<<",";
|
|
||||||
else cout<<")";
|
|
||||||
}
|
|
||||||
cout<<" on Patch (";
|
|
||||||
for(int j=0;j<dim;j++)
|
|
||||||
{
|
|
||||||
cout<<bbox[j]<<"+"<<lli[j]*getdX(j);
|
|
||||||
if(j<dim-1) cout<<",";
|
|
||||||
else cout<<")--";
|
|
||||||
}
|
|
||||||
cout<<"(";
|
|
||||||
for(int j=0;j<dim;j++)
|
|
||||||
{
|
|
||||||
cout<<bbox[dim+j]<<"-"<<uui[j]*getdX(j);
|
|
||||||
if(j<dim-1) cout<<",";
|
|
||||||
else cout<<")"<<endl;
|
|
||||||
}
|
|
||||||
#if 0
|
|
||||||
checkBlock();
|
|
||||||
#else
|
|
||||||
cout<<"splited domains:"<<endl;
|
|
||||||
{
|
|
||||||
MyList<Block> *Bp=blb;
|
|
||||||
while(Bp)
|
|
||||||
{
|
|
||||||
Block *BP=Bp->data;
|
|
||||||
|
|
||||||
for(int i=0;i<dim;i++)
|
|
||||||
{
|
|
||||||
#ifdef Vertex
|
|
||||||
#ifdef Cell
|
|
||||||
#error Both Cell and Vertex are defined
|
|
||||||
#endif
|
|
||||||
llb[i] = (feq(BP->bbox[i] ,bbox[i] ,DH[i]/2)) ? BP->bbox[i]+lli[i]*DH[i] : BP->bbox[i] +(ghost_width-0.5)*DH[i];
|
|
||||||
uub[i] = (feq(BP->bbox[dim+i],bbox[dim+i],DH[i]/2)) ? BP->bbox[dim+i]-uui[i]*DH[i] : BP->bbox[dim+i]-(ghost_width-0.5)*DH[i];
|
|
||||||
#else
|
|
||||||
#ifdef Cell
|
|
||||||
llb[i] = (feq(BP->bbox[i] ,bbox[i] ,DH[i]/2)) ? BP->bbox[i]+lli[i]*DH[i] : BP->bbox[i] +ghost_width*DH[i];
|
|
||||||
uub[i] = (feq(BP->bbox[dim+i],bbox[dim+i],DH[i]/2)) ? BP->bbox[dim+i]-uui[i]*DH[i] : BP->bbox[dim+i]-ghost_width*DH[i];
|
|
||||||
#else
|
|
||||||
#error Not define Vertex nor Cell
|
|
||||||
#endif
|
|
||||||
#endif
|
|
||||||
}
|
|
||||||
cout<<"(";
|
|
||||||
for(int j=0;j<dim;j++)
|
|
||||||
{
|
|
||||||
cout<<llb[j]<<":"<<uub[j];
|
|
||||||
if(j<dim-1) cout<<",";
|
|
||||||
else cout<<")"<<endl;
|
|
||||||
}
|
|
||||||
if(Bp == ble) break;
|
|
||||||
Bp=Bp->next;
|
|
||||||
}
|
|
||||||
}
|
|
||||||
#endif
|
|
||||||
MPI_Abort(MPI_COMM_WORLD,1);
|
|
||||||
}
|
|
||||||
#endif
|
|
||||||
}
|
}
|
||||||
|
|
||||||
delete[] shellf;
|
MPI_Group_free(&world_group);
|
||||||
delete[] weight;
|
MPI_Group_free(&local_group);
|
||||||
delete[] Weight;
|
delete[] owner_rank;
|
||||||
delete[] DH;
|
|
||||||
delete[] llb;
|
|
||||||
delete[] uub;
|
|
||||||
}
|
}
|
||||||
void Patch::checkBlock()
|
void Patch::checkBlock()
|
||||||
{
|
{
|
||||||
|
|||||||
@@ -39,6 +39,10 @@ public:
|
|||||||
|
|
||||||
bool Find_Point(double *XX);
|
bool Find_Point(double *XX);
|
||||||
|
|
||||||
|
void Interp_Points(MyList<var> *VarList,
|
||||||
|
int NN, double **XX,
|
||||||
|
double *Shellf, int Symmetry,
|
||||||
|
int Nmin_consumer, int Nmax_consumer);
|
||||||
void Interp_Points(MyList<var> *VarList,
|
void Interp_Points(MyList<var> *VarList,
|
||||||
int NN, double **XX,
|
int NN, double **XX,
|
||||||
double *Shellf, int Symmetry, MPI_Comm Comm_here);
|
double *Shellf, int Symmetry, MPI_Comm Comm_here);
|
||||||
|
|||||||
@@ -4,8 +4,6 @@
|
|||||||
#include "prolongrestrict.h"
|
#include "prolongrestrict.h"
|
||||||
#include "misc.h"
|
#include "misc.h"
|
||||||
#include "parameters.h"
|
#include "parameters.h"
|
||||||
#include <vector>
|
|
||||||
#include <algorithm>
|
|
||||||
|
|
||||||
int Parallel::partition1(int &nx, int split_size, int min_width, int cpusize, int shape) // special for 1 diemnsion
|
int Parallel::partition1(int &nx, int split_size, int min_width, int cpusize, int shape) // special for 1 diemnsion
|
||||||
{
|
{
|
||||||
@@ -74,14 +72,14 @@ int Parallel::partition3(int *nxyz, int split_size, int *min_width, int cpusize,
|
|||||||
int n;
|
int n;
|
||||||
|
|
||||||
block_size = shape[0] * shape[1] * shape[2];
|
block_size = shape[0] * shape[1] * shape[2];
|
||||||
n = Mymax(1, (block_size + split_size / 2) / split_size);
|
n = Mymax(1, (block_size + split_size / 2) / split_size);
|
||||||
|
|
||||||
maxnx = Mymax(1, shape[0] / min_width[0]);
|
maxnx = Mymax(1, shape[0] / min_width[0]);
|
||||||
maxnx = Mymin(cpusize, maxnx);
|
maxnx = Mymin(cpusize, maxnx);
|
||||||
maxny = Mymax(1, shape[1] / min_width[1]);
|
maxny = Mymax(1, shape[1] / min_width[1]);
|
||||||
maxny = Mymin(cpusize, maxny);
|
maxny = Mymin(cpusize, maxny);
|
||||||
maxnz = Mymax(1, shape[2] / min_width[2]);
|
maxnz = Mymax(1, shape[2] / min_width[2]);
|
||||||
maxnz = Mymin(cpusize, maxnz);
|
maxnz = Mymin(cpusize, maxnz);
|
||||||
fx = (double)shape[0] / (shape[0] + shape[1] + shape[2]);
|
fx = (double)shape[0] / (shape[0] + shape[1] + shape[2]);
|
||||||
fy = (double)shape[1] / (shape[0] + shape[1] + shape[2]);
|
fy = (double)shape[1] / (shape[0] + shape[1] + shape[2]);
|
||||||
fz = (double)shape[2] / (shape[0] + shape[1] + shape[2]);
|
fz = (double)shape[2] / (shape[0] + shape[1] + shape[2]);
|
||||||
@@ -354,73 +352,14 @@ MyList<Block> *Parallel::distribute(MyList<Patch> *PatchLIST, int cpusize, int i
|
|||||||
split_size = Mymax(min_size, block_size / nodes);
|
split_size = Mymax(min_size, block_size / nodes);
|
||||||
split_size = Mymax(1, split_size);
|
split_size = Mymax(1, split_size);
|
||||||
|
|
||||||
// Pass 1: compute block volumes for greedy rank assignment
|
int n_rank = 0;
|
||||||
std::vector<long> block_volumes;
|
|
||||||
PLi = PatchLIST;
|
PLi = PatchLIST;
|
||||||
int reacpu = 0;
|
int reacpu = 0;
|
||||||
while (PLi)
|
while (PLi)
|
||||||
{
|
{
|
||||||
Patch *PP = PLi->data;
|
Patch *PP = PLi->data;
|
||||||
|
|
||||||
reacpu += partition3(nxyz, split_size, mmin_width, nodes, PP->shape);
|
reacpu += partition3(nxyz, split_size, mmin_width, nodes, PP->shape);
|
||||||
int ibbox_here[2 * dim];
|
|
||||||
for (int i = 0; i < nxyz[0]; i++)
|
|
||||||
for (int j = 0; j < nxyz[1]; j++)
|
|
||||||
for (int k = 0; k < nxyz[2]; k++)
|
|
||||||
{
|
|
||||||
ibbox_here[0] = (PP->shape[0] * i) / nxyz[0];
|
|
||||||
ibbox_here[3] = (PP->shape[0] * (i + 1)) / nxyz[0] - 1;
|
|
||||||
ibbox_here[1] = (PP->shape[1] * j) / nxyz[1];
|
|
||||||
ibbox_here[4] = (PP->shape[1] * (j + 1)) / nxyz[1] - 1;
|
|
||||||
ibbox_here[2] = (PP->shape[2] * k) / nxyz[2];
|
|
||||||
ibbox_here[5] = (PP->shape[2] * (k + 1)) / nxyz[2] - 1;
|
|
||||||
if (periodic)
|
|
||||||
{
|
|
||||||
for (int d = 0; d < dim; d++) { ibbox_here[d] -= ghost_width; ibbox_here[dim + d] += ghost_width; }
|
|
||||||
}
|
|
||||||
else
|
|
||||||
{
|
|
||||||
ibbox_here[0] = Mymax(0, ibbox_here[0] - ghost_width);
|
|
||||||
ibbox_here[3] = Mymin(PP->shape[0] - 1, ibbox_here[3] + ghost_width);
|
|
||||||
ibbox_here[1] = Mymax(0, ibbox_here[1] - ghost_width);
|
|
||||||
ibbox_here[4] = Mymin(PP->shape[1] - 1, ibbox_here[4] + ghost_width);
|
|
||||||
ibbox_here[2] = Mymax(0, ibbox_here[2] - ghost_width);
|
|
||||||
ibbox_here[5] = Mymin(PP->shape[2] - 1, ibbox_here[5] + ghost_width);
|
|
||||||
}
|
|
||||||
long vol = 1;
|
|
||||||
for (int d = 0; d < dim; d++)
|
|
||||||
vol *= (ibbox_here[dim + d] - ibbox_here[d] + 1);
|
|
||||||
block_volumes.push_back(vol);
|
|
||||||
}
|
|
||||||
PLi = PLi->next;
|
|
||||||
}
|
|
||||||
|
|
||||||
// Greedy LPT: sort by volume descending, assign each to least-loaded rank
|
|
||||||
std::vector<int> assigned_ranks(block_volumes.size());
|
|
||||||
{
|
|
||||||
std::vector<int> order(block_volumes.size());
|
|
||||||
for (int i = 0; i < (int)order.size(); i++) order[i] = i;
|
|
||||||
std::sort(order.begin(), order.end(), [&](int a, int b) {
|
|
||||||
return block_volumes[a] > block_volumes[b];
|
|
||||||
});
|
|
||||||
std::vector<long> load(cpusize, 0);
|
|
||||||
for (int idx : order)
|
|
||||||
{
|
|
||||||
int min_r = 0;
|
|
||||||
for (int r = 1; r < cpusize; r++)
|
|
||||||
if (load[r] < load[min_r]) min_r = r;
|
|
||||||
assigned_ranks[idx] = min_r;
|
|
||||||
load[min_r] += block_volumes[idx];
|
|
||||||
}
|
|
||||||
}
|
|
||||||
|
|
||||||
// Pass 2: create blocks with pre-assigned ranks
|
|
||||||
int block_idx = 0;
|
|
||||||
PLi = PatchLIST;
|
|
||||||
while (PLi)
|
|
||||||
{
|
|
||||||
Patch *PP = PLi->data;
|
|
||||||
|
|
||||||
partition3(nxyz, split_size, mmin_width, nodes, PP->shape);
|
|
||||||
|
|
||||||
Block *ng0, *ng;
|
Block *ng0, *ng;
|
||||||
int shape_here[dim], ibbox_here[2 * dim];
|
int shape_here[dim], ibbox_here[2 * dim];
|
||||||
@@ -504,7 +443,10 @@ MyList<Block> *Parallel::distribute(MyList<Patch> *PatchLIST, int cpusize, int i
|
|||||||
int shape_res[dim * pices];
|
int shape_res[dim * pices];
|
||||||
double bbox_res[2 * dim * pices];
|
double bbox_res[2 * dim * pices];
|
||||||
misc::dividBlock(dim, shape_here, bbox_here, pices, picef, shape_res, bbox_res, min_width);
|
misc::dividBlock(dim, shape_here, bbox_here, pices, picef, shape_res, bbox_res, min_width);
|
||||||
ng = ng0 = new Block(dim, shape_res, bbox_res, assigned_ranks[block_idx++], ingfsi, fngfsi, PP->lev, 0); // delete through KillBlocks
|
ng = ng0 = new Block(dim, shape_res, bbox_res, n_rank++, ingfsi, fngfsi, PP->lev, 0); // delete through KillBlocks
|
||||||
|
|
||||||
|
// if(n_rank==cpusize) {n_rank=0; cerr<<"place one!!"<<endl;}
|
||||||
|
|
||||||
// ng->checkBlock();
|
// ng->checkBlock();
|
||||||
if (BlL)
|
if (BlL)
|
||||||
BlL->insert(ng);
|
BlL->insert(ng);
|
||||||
@@ -513,19 +455,22 @@ MyList<Block> *Parallel::distribute(MyList<Patch> *PatchLIST, int cpusize, int i
|
|||||||
|
|
||||||
for (int i = 1; i < pices; i++)
|
for (int i = 1; i < pices; i++)
|
||||||
{
|
{
|
||||||
ng = new Block(dim, shape_res + i * dim, bbox_res + i * 2 * dim, assigned_ranks[block_idx++], ingfsi, fngfsi, PP->lev, i); // delete through KillBlocks
|
ng = new Block(dim, shape_res + i * dim, bbox_res + i * 2 * dim, n_rank++, ingfsi, fngfsi, PP->lev, i); // delete through KillBlocks
|
||||||
|
// if(n_rank==cpusize) {n_rank=0; cerr<<"place two!! "<<i<<endl;}
|
||||||
// ng->checkBlock();
|
// ng->checkBlock();
|
||||||
BlL->insert(ng);
|
BlL->insert(ng);
|
||||||
}
|
}
|
||||||
}
|
}
|
||||||
#else
|
#else
|
||||||
ng = ng0 = new Block(dim, shape_here, bbox_here, assigned_ranks[block_idx++], ingfsi, fngfsi, PP->lev); // delete through KillBlocks
|
ng = ng0 = new Block(dim, shape_here, bbox_here, n_rank++, ingfsi, fngfsi, PP->lev); // delete through KillBlocks
|
||||||
// ng->checkBlock();
|
// ng->checkBlock();
|
||||||
if (BlL)
|
if (BlL)
|
||||||
BlL->insert(ng);
|
BlL->insert(ng);
|
||||||
else
|
else
|
||||||
BlL = new MyList<Block>(ng); // delete through KillBlocks
|
BlL = new MyList<Block>(ng); // delete through KillBlocks
|
||||||
#endif
|
#endif
|
||||||
|
if (n_rank == cpusize)
|
||||||
|
n_rank = 0;
|
||||||
|
|
||||||
// set PP->blb
|
// set PP->blb
|
||||||
if (i == 0 && j == 0 && k == 0)
|
if (i == 0 && j == 0 && k == 0)
|
||||||
@@ -3559,7 +3504,7 @@ int Parallel::data_packermix(double *data, MyList<Parallel::gridseg> *src, MyLis
|
|||||||
|
|
||||||
return size_out;
|
return size_out;
|
||||||
}
|
}
|
||||||
|
//
|
||||||
void Parallel::transfer(MyList<Parallel::gridseg> **src, MyList<Parallel::gridseg> **dst,
|
void Parallel::transfer(MyList<Parallel::gridseg> **src, MyList<Parallel::gridseg> **dst,
|
||||||
MyList<var> *VarList1 /* source */, MyList<var> *VarList2 /*target */,
|
MyList<var> *VarList1 /* source */, MyList<var> *VarList2 /*target */,
|
||||||
int Symmetry)
|
int Symmetry)
|
||||||
@@ -3567,20 +3512,13 @@ void Parallel::transfer(MyList<Parallel::gridseg> **src, MyList<Parallel::gridse
|
|||||||
int myrank, cpusize;
|
int myrank, cpusize;
|
||||||
MPI_Comm_size(MPI_COMM_WORLD, &cpusize);
|
MPI_Comm_size(MPI_COMM_WORLD, &cpusize);
|
||||||
MPI_Comm_rank(MPI_COMM_WORLD, &myrank);
|
MPI_Comm_rank(MPI_COMM_WORLD, &myrank);
|
||||||
/*
|
|
||||||
// Early exit: if no gridseg pairs exist for any node, skip all work
|
|
||||||
{
|
|
||||||
bool has_segs = false;
|
|
||||||
for (int n = 0; n < cpusize; n++) {
|
|
||||||
if (src[n] && dst[n]) { has_segs = true; break; }
|
|
||||||
}
|
|
||||||
if (!has_segs) return;
|
|
||||||
}
|
|
||||||
*/
|
|
||||||
int node;
|
int node;
|
||||||
|
|
||||||
MPI_Request *reqs = new MPI_Request[2 * cpusize];
|
MPI_Request *reqs;
|
||||||
MPI_Status *stats = new MPI_Status[2 * cpusize];
|
MPI_Status *stats;
|
||||||
|
reqs = new MPI_Request[2 * cpusize];
|
||||||
|
stats = new MPI_Status[2 * cpusize];
|
||||||
int req_no = 0;
|
int req_no = 0;
|
||||||
|
|
||||||
double **send_data, **rec_data;
|
double **send_data, **rec_data;
|
||||||
@@ -3588,42 +3526,50 @@ void Parallel::transfer(MyList<Parallel::gridseg> **src, MyList<Parallel::gridse
|
|||||||
rec_data = new double *[cpusize];
|
rec_data = new double *[cpusize];
|
||||||
int length;
|
int length;
|
||||||
|
|
||||||
for (node = 0; node < cpusize; node++)
|
|
||||||
send_data[node] = rec_data[node] = 0;
|
|
||||||
|
|
||||||
// 第1步: 本地拷贝 + 所有 Irecv
|
|
||||||
for (node = 0; node < cpusize; node++)
|
for (node = 0; node < cpusize; node++)
|
||||||
{
|
{
|
||||||
|
send_data[node] = rec_data[node] = 0;
|
||||||
if (node == myrank)
|
if (node == myrank)
|
||||||
{
|
{
|
||||||
if (length = data_packer(0, src[myrank], dst[myrank], node, PACK, VarList1, VarList2, Symmetry))
|
if (length = data_packer(0, src[myrank], dst[myrank], node, PACK, VarList1, VarList2, Symmetry))
|
||||||
{
|
{
|
||||||
rec_data[node] = new double[length];
|
rec_data[node] = new double[length];
|
||||||
|
if (!rec_data[node])
|
||||||
|
{
|
||||||
|
cout << "out of memory when new in short transfer, place 1" << endl;
|
||||||
|
MPI_Abort(MPI_COMM_WORLD, 1);
|
||||||
|
}
|
||||||
data_packer(rec_data[node], src[myrank], dst[myrank], node, PACK, VarList1, VarList2, Symmetry);
|
data_packer(rec_data[node], src[myrank], dst[myrank], node, PACK, VarList1, VarList2, Symmetry);
|
||||||
}
|
}
|
||||||
}
|
}
|
||||||
else
|
else
|
||||||
{
|
{
|
||||||
|
// send from this cpu to cpu#node
|
||||||
|
if (length = data_packer(0, src[myrank], dst[myrank], node, PACK, VarList1, VarList2, Symmetry))
|
||||||
|
{
|
||||||
|
send_data[node] = new double[length];
|
||||||
|
if (!send_data[node])
|
||||||
|
{
|
||||||
|
cout << "out of memory when new in short transfer, place 2" << endl;
|
||||||
|
MPI_Abort(MPI_COMM_WORLD, 1);
|
||||||
|
}
|
||||||
|
data_packer(send_data[node], src[myrank], dst[myrank], node, PACK, VarList1, VarList2, Symmetry);
|
||||||
|
MPI_Isend((void *)send_data[node], length, MPI_DOUBLE, node, 1, MPI_COMM_WORLD, reqs + req_no++);
|
||||||
|
}
|
||||||
|
// receive from cpu#node to this cpu
|
||||||
if (length = data_packer(0, src[node], dst[node], node, UNPACK, VarList1, VarList2, Symmetry))
|
if (length = data_packer(0, src[node], dst[node], node, UNPACK, VarList1, VarList2, Symmetry))
|
||||||
{
|
{
|
||||||
rec_data[node] = new double[length];
|
rec_data[node] = new double[length];
|
||||||
|
if (!rec_data[node])
|
||||||
|
{
|
||||||
|
cout << "out of memory when new in short transfer, place 3" << endl;
|
||||||
|
MPI_Abort(MPI_COMM_WORLD, 1);
|
||||||
|
}
|
||||||
MPI_Irecv((void *)rec_data[node], length, MPI_DOUBLE, node, 1, MPI_COMM_WORLD, reqs + req_no++);
|
MPI_Irecv((void *)rec_data[node], length, MPI_DOUBLE, node, 1, MPI_COMM_WORLD, reqs + req_no++);
|
||||||
}
|
}
|
||||||
}
|
}
|
||||||
}
|
}
|
||||||
|
// wait for all requests to complete
|
||||||
// 第2步: pack + Isend
|
|
||||||
for (node = 0; node < cpusize; node++)
|
|
||||||
{
|
|
||||||
if (node == myrank) continue;
|
|
||||||
if (length = data_packer(0, src[myrank], dst[myrank], node, PACK, VarList1, VarList2, Symmetry))
|
|
||||||
{
|
|
||||||
send_data[node] = new double[length];
|
|
||||||
data_packer(send_data[node], src[myrank], dst[myrank], node, PACK, VarList1, VarList2, Symmetry);
|
|
||||||
MPI_Isend((void *)send_data[node], length, MPI_DOUBLE, node, 1, MPI_COMM_WORLD, reqs + req_no++);
|
|
||||||
}
|
|
||||||
}
|
|
||||||
|
|
||||||
MPI_Waitall(req_no, reqs, stats);
|
MPI_Waitall(req_no, reqs, stats);
|
||||||
|
|
||||||
for (node = 0; node < cpusize; node++)
|
for (node = 0; node < cpusize; node++)
|
||||||
@@ -3810,6 +3756,502 @@ void Parallel::Sync(MyList<Patch> *PatL, MyList<var> *VarList, int Symmetry)
|
|||||||
delete[] transfer_src;
|
delete[] transfer_src;
|
||||||
delete[] transfer_dst;
|
delete[] transfer_dst;
|
||||||
}
|
}
|
||||||
|
// Merged Sync: collect all intra-patch and inter-patch grid segment lists,
|
||||||
|
// then issue a single transfer() call instead of N+1 separate ones.
|
||||||
|
void Parallel::Sync_merged(MyList<Patch> *PatL, MyList<var> *VarList, int Symmetry)
|
||||||
|
{
|
||||||
|
int cpusize;
|
||||||
|
MPI_Comm_size(MPI_COMM_WORLD, &cpusize);
|
||||||
|
|
||||||
|
MyList<Parallel::gridseg> **combined_src = new MyList<Parallel::gridseg> *[cpusize];
|
||||||
|
MyList<Parallel::gridseg> **combined_dst = new MyList<Parallel::gridseg> *[cpusize];
|
||||||
|
for (int node = 0; node < cpusize; node++)
|
||||||
|
combined_src[node] = combined_dst[node] = 0;
|
||||||
|
|
||||||
|
// Phase A: Intra-patch ghost exchange segments
|
||||||
|
MyList<Patch> *Pp = PatL;
|
||||||
|
while (Pp)
|
||||||
|
{
|
||||||
|
Patch *Pat = Pp->data;
|
||||||
|
MyList<Parallel::gridseg> *dst_ghost = build_ghost_gsl(Pat);
|
||||||
|
|
||||||
|
for (int node = 0; node < cpusize; node++)
|
||||||
|
{
|
||||||
|
MyList<Parallel::gridseg> *src_owned = build_owned_gsl0(Pat, node);
|
||||||
|
MyList<Parallel::gridseg> *tsrc = 0, *tdst = 0;
|
||||||
|
build_gstl(src_owned, dst_ghost, &tsrc, &tdst);
|
||||||
|
|
||||||
|
if (tsrc)
|
||||||
|
{
|
||||||
|
if (combined_src[node])
|
||||||
|
combined_src[node]->catList(tsrc);
|
||||||
|
else
|
||||||
|
combined_src[node] = tsrc;
|
||||||
|
}
|
||||||
|
if (tdst)
|
||||||
|
{
|
||||||
|
if (combined_dst[node])
|
||||||
|
combined_dst[node]->catList(tdst);
|
||||||
|
else
|
||||||
|
combined_dst[node] = tdst;
|
||||||
|
}
|
||||||
|
|
||||||
|
if (src_owned)
|
||||||
|
src_owned->destroyList();
|
||||||
|
}
|
||||||
|
|
||||||
|
if (dst_ghost)
|
||||||
|
dst_ghost->destroyList();
|
||||||
|
|
||||||
|
Pp = Pp->next;
|
||||||
|
}
|
||||||
|
|
||||||
|
// Phase B: Inter-patch buffer exchange segments
|
||||||
|
MyList<Parallel::gridseg> *dst_buffer = build_buffer_gsl(PatL);
|
||||||
|
for (int node = 0; node < cpusize; node++)
|
||||||
|
{
|
||||||
|
MyList<Parallel::gridseg> *src_owned = build_owned_gsl(PatL, node, 5, Symmetry);
|
||||||
|
MyList<Parallel::gridseg> *tsrc = 0, *tdst = 0;
|
||||||
|
build_gstl(src_owned, dst_buffer, &tsrc, &tdst);
|
||||||
|
|
||||||
|
if (tsrc)
|
||||||
|
{
|
||||||
|
if (combined_src[node])
|
||||||
|
combined_src[node]->catList(tsrc);
|
||||||
|
else
|
||||||
|
combined_src[node] = tsrc;
|
||||||
|
}
|
||||||
|
if (tdst)
|
||||||
|
{
|
||||||
|
if (combined_dst[node])
|
||||||
|
combined_dst[node]->catList(tdst);
|
||||||
|
else
|
||||||
|
combined_dst[node] = tdst;
|
||||||
|
}
|
||||||
|
|
||||||
|
if (src_owned)
|
||||||
|
src_owned->destroyList();
|
||||||
|
}
|
||||||
|
if (dst_buffer)
|
||||||
|
dst_buffer->destroyList();
|
||||||
|
|
||||||
|
// Phase C: Single transfer
|
||||||
|
transfer(combined_src, combined_dst, VarList, VarList, Symmetry);
|
||||||
|
|
||||||
|
// Phase D: Cleanup
|
||||||
|
for (int node = 0; node < cpusize; node++)
|
||||||
|
{
|
||||||
|
if (combined_src[node])
|
||||||
|
combined_src[node]->destroyList();
|
||||||
|
if (combined_dst[node])
|
||||||
|
combined_dst[node]->destroyList();
|
||||||
|
}
|
||||||
|
delete[] combined_src;
|
||||||
|
delete[] combined_dst;
|
||||||
|
}
|
||||||
|
// SyncCache constructor
|
||||||
|
Parallel::SyncCache::SyncCache()
|
||||||
|
: valid(false), cpusize(0), combined_src(0), combined_dst(0),
|
||||||
|
send_lengths(0), recv_lengths(0), send_bufs(0), recv_bufs(0),
|
||||||
|
send_buf_caps(0), recv_buf_caps(0), reqs(0), stats(0), max_reqs(0),
|
||||||
|
lengths_valid(false)
|
||||||
|
{
|
||||||
|
}
|
||||||
|
// SyncCache invalidate: free grid segment lists but keep buffers
|
||||||
|
void Parallel::SyncCache::invalidate()
|
||||||
|
{
|
||||||
|
if (!valid)
|
||||||
|
return;
|
||||||
|
for (int i = 0; i < cpusize; i++)
|
||||||
|
{
|
||||||
|
if (combined_src[i])
|
||||||
|
combined_src[i]->destroyList();
|
||||||
|
if (combined_dst[i])
|
||||||
|
combined_dst[i]->destroyList();
|
||||||
|
combined_src[i] = combined_dst[i] = 0;
|
||||||
|
send_lengths[i] = recv_lengths[i] = 0;
|
||||||
|
}
|
||||||
|
valid = false;
|
||||||
|
lengths_valid = false;
|
||||||
|
}
|
||||||
|
// SyncCache destroy: free everything
|
||||||
|
void Parallel::SyncCache::destroy()
|
||||||
|
{
|
||||||
|
invalidate();
|
||||||
|
if (combined_src) delete[] combined_src;
|
||||||
|
if (combined_dst) delete[] combined_dst;
|
||||||
|
if (send_lengths) delete[] send_lengths;
|
||||||
|
if (recv_lengths) delete[] recv_lengths;
|
||||||
|
if (send_buf_caps) delete[] send_buf_caps;
|
||||||
|
if (recv_buf_caps) delete[] recv_buf_caps;
|
||||||
|
for (int i = 0; i < cpusize; i++)
|
||||||
|
{
|
||||||
|
if (send_bufs && send_bufs[i]) delete[] send_bufs[i];
|
||||||
|
if (recv_bufs && recv_bufs[i]) delete[] recv_bufs[i];
|
||||||
|
}
|
||||||
|
if (send_bufs) delete[] send_bufs;
|
||||||
|
if (recv_bufs) delete[] recv_bufs;
|
||||||
|
if (reqs) delete[] reqs;
|
||||||
|
if (stats) delete[] stats;
|
||||||
|
combined_src = combined_dst = 0;
|
||||||
|
send_lengths = recv_lengths = 0;
|
||||||
|
send_buf_caps = recv_buf_caps = 0;
|
||||||
|
send_bufs = recv_bufs = 0;
|
||||||
|
reqs = 0; stats = 0;
|
||||||
|
cpusize = 0; max_reqs = 0;
|
||||||
|
}
|
||||||
|
// transfer_cached: reuse pre-allocated buffers from SyncCache
|
||||||
|
void Parallel::transfer_cached(MyList<Parallel::gridseg> **src, MyList<Parallel::gridseg> **dst,
|
||||||
|
MyList<var> *VarList1, MyList<var> *VarList2,
|
||||||
|
int Symmetry, SyncCache &cache)
|
||||||
|
{
|
||||||
|
int myrank;
|
||||||
|
MPI_Comm_size(MPI_COMM_WORLD, &cache.cpusize);
|
||||||
|
MPI_Comm_rank(MPI_COMM_WORLD, &myrank);
|
||||||
|
int cpusize = cache.cpusize;
|
||||||
|
|
||||||
|
int req_no = 0;
|
||||||
|
int node;
|
||||||
|
|
||||||
|
for (node = 0; node < cpusize; node++)
|
||||||
|
{
|
||||||
|
if (node == myrank)
|
||||||
|
{
|
||||||
|
int length = data_packer(0, src[myrank], dst[myrank], node, PACK, VarList1, VarList2, Symmetry);
|
||||||
|
cache.recv_lengths[node] = length;
|
||||||
|
if (length > 0)
|
||||||
|
{
|
||||||
|
if (length > cache.recv_buf_caps[node])
|
||||||
|
{
|
||||||
|
if (cache.recv_bufs[node]) delete[] cache.recv_bufs[node];
|
||||||
|
cache.recv_bufs[node] = new double[length];
|
||||||
|
cache.recv_buf_caps[node] = length;
|
||||||
|
}
|
||||||
|
data_packer(cache.recv_bufs[node], src[myrank], dst[myrank], node, PACK, VarList1, VarList2, Symmetry);
|
||||||
|
}
|
||||||
|
}
|
||||||
|
else
|
||||||
|
{
|
||||||
|
// send
|
||||||
|
int slength = data_packer(0, src[myrank], dst[myrank], node, PACK, VarList1, VarList2, Symmetry);
|
||||||
|
cache.send_lengths[node] = slength;
|
||||||
|
if (slength > 0)
|
||||||
|
{
|
||||||
|
if (slength > cache.send_buf_caps[node])
|
||||||
|
{
|
||||||
|
if (cache.send_bufs[node]) delete[] cache.send_bufs[node];
|
||||||
|
cache.send_bufs[node] = new double[slength];
|
||||||
|
cache.send_buf_caps[node] = slength;
|
||||||
|
}
|
||||||
|
data_packer(cache.send_bufs[node], src[myrank], dst[myrank], node, PACK, VarList1, VarList2, Symmetry);
|
||||||
|
MPI_Isend((void *)cache.send_bufs[node], slength, MPI_DOUBLE, node, 1, MPI_COMM_WORLD, cache.reqs + req_no++);
|
||||||
|
}
|
||||||
|
// recv
|
||||||
|
int rlength = data_packer(0, src[node], dst[node], node, UNPACK, VarList1, VarList2, Symmetry);
|
||||||
|
cache.recv_lengths[node] = rlength;
|
||||||
|
if (rlength > 0)
|
||||||
|
{
|
||||||
|
if (rlength > cache.recv_buf_caps[node])
|
||||||
|
{
|
||||||
|
if (cache.recv_bufs[node]) delete[] cache.recv_bufs[node];
|
||||||
|
cache.recv_bufs[node] = new double[rlength];
|
||||||
|
cache.recv_buf_caps[node] = rlength;
|
||||||
|
}
|
||||||
|
MPI_Irecv((void *)cache.recv_bufs[node], rlength, MPI_DOUBLE, node, 1, MPI_COMM_WORLD, cache.reqs + req_no++);
|
||||||
|
}
|
||||||
|
}
|
||||||
|
}
|
||||||
|
|
||||||
|
MPI_Waitall(req_no, cache.reqs, cache.stats);
|
||||||
|
|
||||||
|
for (node = 0; node < cpusize; node++)
|
||||||
|
if (cache.recv_bufs[node] && cache.recv_lengths[node] > 0)
|
||||||
|
data_packer(cache.recv_bufs[node], src[node], dst[node], node, UNPACK, VarList1, VarList2, Symmetry);
|
||||||
|
}
|
||||||
|
// Sync_cached: build grid segment lists on first call, reuse on subsequent calls
|
||||||
|
void Parallel::Sync_cached(MyList<Patch> *PatL, MyList<var> *VarList, int Symmetry, SyncCache &cache)
|
||||||
|
{
|
||||||
|
if (!cache.valid)
|
||||||
|
{
|
||||||
|
int cpusize;
|
||||||
|
MPI_Comm_size(MPI_COMM_WORLD, &cpusize);
|
||||||
|
cache.cpusize = cpusize;
|
||||||
|
|
||||||
|
// Allocate cache arrays if needed
|
||||||
|
if (!cache.combined_src)
|
||||||
|
{
|
||||||
|
cache.combined_src = new MyList<Parallel::gridseg> *[cpusize];
|
||||||
|
cache.combined_dst = new MyList<Parallel::gridseg> *[cpusize];
|
||||||
|
cache.send_lengths = new int[cpusize];
|
||||||
|
cache.recv_lengths = new int[cpusize];
|
||||||
|
cache.send_bufs = new double *[cpusize];
|
||||||
|
cache.recv_bufs = new double *[cpusize];
|
||||||
|
cache.send_buf_caps = new int[cpusize];
|
||||||
|
cache.recv_buf_caps = new int[cpusize];
|
||||||
|
for (int i = 0; i < cpusize; i++)
|
||||||
|
{
|
||||||
|
cache.send_bufs[i] = cache.recv_bufs[i] = 0;
|
||||||
|
cache.send_buf_caps[i] = cache.recv_buf_caps[i] = 0;
|
||||||
|
}
|
||||||
|
cache.max_reqs = 2 * cpusize;
|
||||||
|
cache.reqs = new MPI_Request[cache.max_reqs];
|
||||||
|
cache.stats = new MPI_Status[cache.max_reqs];
|
||||||
|
}
|
||||||
|
|
||||||
|
for (int node = 0; node < cpusize; node++)
|
||||||
|
{
|
||||||
|
cache.combined_src[node] = cache.combined_dst[node] = 0;
|
||||||
|
cache.send_lengths[node] = cache.recv_lengths[node] = 0;
|
||||||
|
}
|
||||||
|
|
||||||
|
// Build intra-patch segments (same as Sync_merged Phase A)
|
||||||
|
MyList<Patch> *Pp = PatL;
|
||||||
|
while (Pp)
|
||||||
|
{
|
||||||
|
Patch *Pat = Pp->data;
|
||||||
|
MyList<Parallel::gridseg> *dst_ghost = build_ghost_gsl(Pat);
|
||||||
|
for (int node = 0; node < cpusize; node++)
|
||||||
|
{
|
||||||
|
MyList<Parallel::gridseg> *src_owned = build_owned_gsl0(Pat, node);
|
||||||
|
MyList<Parallel::gridseg> *tsrc = 0, *tdst = 0;
|
||||||
|
build_gstl(src_owned, dst_ghost, &tsrc, &tdst);
|
||||||
|
if (tsrc)
|
||||||
|
{
|
||||||
|
if (cache.combined_src[node])
|
||||||
|
cache.combined_src[node]->catList(tsrc);
|
||||||
|
else
|
||||||
|
cache.combined_src[node] = tsrc;
|
||||||
|
}
|
||||||
|
if (tdst)
|
||||||
|
{
|
||||||
|
if (cache.combined_dst[node])
|
||||||
|
cache.combined_dst[node]->catList(tdst);
|
||||||
|
else
|
||||||
|
cache.combined_dst[node] = tdst;
|
||||||
|
}
|
||||||
|
if (src_owned) src_owned->destroyList();
|
||||||
|
}
|
||||||
|
if (dst_ghost) dst_ghost->destroyList();
|
||||||
|
Pp = Pp->next;
|
||||||
|
}
|
||||||
|
|
||||||
|
// Build inter-patch segments (same as Sync_merged Phase B)
|
||||||
|
MyList<Parallel::gridseg> *dst_buffer = build_buffer_gsl(PatL);
|
||||||
|
for (int node = 0; node < cpusize; node++)
|
||||||
|
{
|
||||||
|
MyList<Parallel::gridseg> *src_owned = build_owned_gsl(PatL, node, 5, Symmetry);
|
||||||
|
MyList<Parallel::gridseg> *tsrc = 0, *tdst = 0;
|
||||||
|
build_gstl(src_owned, dst_buffer, &tsrc, &tdst);
|
||||||
|
if (tsrc)
|
||||||
|
{
|
||||||
|
if (cache.combined_src[node])
|
||||||
|
cache.combined_src[node]->catList(tsrc);
|
||||||
|
else
|
||||||
|
cache.combined_src[node] = tsrc;
|
||||||
|
}
|
||||||
|
if (tdst)
|
||||||
|
{
|
||||||
|
if (cache.combined_dst[node])
|
||||||
|
cache.combined_dst[node]->catList(tdst);
|
||||||
|
else
|
||||||
|
cache.combined_dst[node] = tdst;
|
||||||
|
}
|
||||||
|
if (src_owned) src_owned->destroyList();
|
||||||
|
}
|
||||||
|
if (dst_buffer) dst_buffer->destroyList();
|
||||||
|
|
||||||
|
cache.valid = true;
|
||||||
|
}
|
||||||
|
|
||||||
|
// Use cached lists with buffer-reusing transfer
|
||||||
|
transfer_cached(cache.combined_src, cache.combined_dst, VarList, VarList, Symmetry, cache);
|
||||||
|
}
|
||||||
|
// Sync_start: pack and post MPI_Isend/Irecv, return immediately
|
||||||
|
void Parallel::Sync_start(MyList<Patch> *PatL, MyList<var> *VarList, int Symmetry,
|
||||||
|
SyncCache &cache, AsyncSyncState &state)
|
||||||
|
{
|
||||||
|
// Ensure cache is built
|
||||||
|
if (!cache.valid)
|
||||||
|
{
|
||||||
|
// Build cache (same logic as Sync_cached)
|
||||||
|
int cpusize;
|
||||||
|
MPI_Comm_size(MPI_COMM_WORLD, &cpusize);
|
||||||
|
cache.cpusize = cpusize;
|
||||||
|
|
||||||
|
if (!cache.combined_src)
|
||||||
|
{
|
||||||
|
cache.combined_src = new MyList<Parallel::gridseg> *[cpusize];
|
||||||
|
cache.combined_dst = new MyList<Parallel::gridseg> *[cpusize];
|
||||||
|
cache.send_lengths = new int[cpusize];
|
||||||
|
cache.recv_lengths = new int[cpusize];
|
||||||
|
cache.send_bufs = new double *[cpusize];
|
||||||
|
cache.recv_bufs = new double *[cpusize];
|
||||||
|
cache.send_buf_caps = new int[cpusize];
|
||||||
|
cache.recv_buf_caps = new int[cpusize];
|
||||||
|
for (int i = 0; i < cpusize; i++)
|
||||||
|
{
|
||||||
|
cache.send_bufs[i] = cache.recv_bufs[i] = 0;
|
||||||
|
cache.send_buf_caps[i] = cache.recv_buf_caps[i] = 0;
|
||||||
|
}
|
||||||
|
cache.max_reqs = 2 * cpusize;
|
||||||
|
cache.reqs = new MPI_Request[cache.max_reqs];
|
||||||
|
cache.stats = new MPI_Status[cache.max_reqs];
|
||||||
|
}
|
||||||
|
|
||||||
|
for (int node = 0; node < cpusize; node++)
|
||||||
|
{
|
||||||
|
cache.combined_src[node] = cache.combined_dst[node] = 0;
|
||||||
|
cache.send_lengths[node] = cache.recv_lengths[node] = 0;
|
||||||
|
}
|
||||||
|
|
||||||
|
MyList<Patch> *Pp = PatL;
|
||||||
|
while (Pp)
|
||||||
|
{
|
||||||
|
Patch *Pat = Pp->data;
|
||||||
|
MyList<Parallel::gridseg> *dst_ghost = build_ghost_gsl(Pat);
|
||||||
|
for (int node = 0; node < cpusize; node++)
|
||||||
|
{
|
||||||
|
MyList<Parallel::gridseg> *src_owned = build_owned_gsl0(Pat, node);
|
||||||
|
MyList<Parallel::gridseg> *tsrc = 0, *tdst = 0;
|
||||||
|
build_gstl(src_owned, dst_ghost, &tsrc, &tdst);
|
||||||
|
if (tsrc)
|
||||||
|
{
|
||||||
|
if (cache.combined_src[node])
|
||||||
|
cache.combined_src[node]->catList(tsrc);
|
||||||
|
else
|
||||||
|
cache.combined_src[node] = tsrc;
|
||||||
|
}
|
||||||
|
if (tdst)
|
||||||
|
{
|
||||||
|
if (cache.combined_dst[node])
|
||||||
|
cache.combined_dst[node]->catList(tdst);
|
||||||
|
else
|
||||||
|
cache.combined_dst[node] = tdst;
|
||||||
|
}
|
||||||
|
if (src_owned) src_owned->destroyList();
|
||||||
|
}
|
||||||
|
if (dst_ghost) dst_ghost->destroyList();
|
||||||
|
Pp = Pp->next;
|
||||||
|
}
|
||||||
|
|
||||||
|
MyList<Parallel::gridseg> *dst_buffer = build_buffer_gsl(PatL);
|
||||||
|
for (int node = 0; node < cpusize; node++)
|
||||||
|
{
|
||||||
|
MyList<Parallel::gridseg> *src_owned = build_owned_gsl(PatL, node, 5, Symmetry);
|
||||||
|
MyList<Parallel::gridseg> *tsrc = 0, *tdst = 0;
|
||||||
|
build_gstl(src_owned, dst_buffer, &tsrc, &tdst);
|
||||||
|
if (tsrc)
|
||||||
|
{
|
||||||
|
if (cache.combined_src[node])
|
||||||
|
cache.combined_src[node]->catList(tsrc);
|
||||||
|
else
|
||||||
|
cache.combined_src[node] = tsrc;
|
||||||
|
}
|
||||||
|
if (tdst)
|
||||||
|
{
|
||||||
|
if (cache.combined_dst[node])
|
||||||
|
cache.combined_dst[node]->catList(tdst);
|
||||||
|
else
|
||||||
|
cache.combined_dst[node] = tdst;
|
||||||
|
}
|
||||||
|
if (src_owned) src_owned->destroyList();
|
||||||
|
}
|
||||||
|
if (dst_buffer) dst_buffer->destroyList();
|
||||||
|
cache.valid = true;
|
||||||
|
}
|
||||||
|
|
||||||
|
// Now pack and post async MPI operations
|
||||||
|
int myrank;
|
||||||
|
MPI_Comm_rank(MPI_COMM_WORLD, &myrank);
|
||||||
|
int cpusize = cache.cpusize;
|
||||||
|
state.req_no = 0;
|
||||||
|
state.active = true;
|
||||||
|
|
||||||
|
MyList<Parallel::gridseg> **src = cache.combined_src;
|
||||||
|
MyList<Parallel::gridseg> **dst = cache.combined_dst;
|
||||||
|
|
||||||
|
for (int node = 0; node < cpusize; node++)
|
||||||
|
{
|
||||||
|
if (node == myrank)
|
||||||
|
{
|
||||||
|
int length;
|
||||||
|
if (!cache.lengths_valid) {
|
||||||
|
length = data_packer(0, src[myrank], dst[myrank], node, PACK, VarList, VarList, Symmetry);
|
||||||
|
cache.recv_lengths[node] = length;
|
||||||
|
} else {
|
||||||
|
length = cache.recv_lengths[node];
|
||||||
|
}
|
||||||
|
if (length > 0)
|
||||||
|
{
|
||||||
|
if (length > cache.recv_buf_caps[node])
|
||||||
|
{
|
||||||
|
if (cache.recv_bufs[node]) delete[] cache.recv_bufs[node];
|
||||||
|
cache.recv_bufs[node] = new double[length];
|
||||||
|
cache.recv_buf_caps[node] = length;
|
||||||
|
}
|
||||||
|
data_packer(cache.recv_bufs[node], src[myrank], dst[myrank], node, PACK, VarList, VarList, Symmetry);
|
||||||
|
}
|
||||||
|
}
|
||||||
|
else
|
||||||
|
{
|
||||||
|
int slength;
|
||||||
|
if (!cache.lengths_valid) {
|
||||||
|
slength = data_packer(0, src[myrank], dst[myrank], node, PACK, VarList, VarList, Symmetry);
|
||||||
|
cache.send_lengths[node] = slength;
|
||||||
|
} else {
|
||||||
|
slength = cache.send_lengths[node];
|
||||||
|
}
|
||||||
|
if (slength > 0)
|
||||||
|
{
|
||||||
|
if (slength > cache.send_buf_caps[node])
|
||||||
|
{
|
||||||
|
if (cache.send_bufs[node]) delete[] cache.send_bufs[node];
|
||||||
|
cache.send_bufs[node] = new double[slength];
|
||||||
|
cache.send_buf_caps[node] = slength;
|
||||||
|
}
|
||||||
|
data_packer(cache.send_bufs[node], src[myrank], dst[myrank], node, PACK, VarList, VarList, Symmetry);
|
||||||
|
MPI_Isend((void *)cache.send_bufs[node], slength, MPI_DOUBLE, node, 2, MPI_COMM_WORLD, cache.reqs + state.req_no++);
|
||||||
|
}
|
||||||
|
int rlength;
|
||||||
|
if (!cache.lengths_valid) {
|
||||||
|
rlength = data_packer(0, src[node], dst[node], node, UNPACK, VarList, VarList, Symmetry);
|
||||||
|
cache.recv_lengths[node] = rlength;
|
||||||
|
} else {
|
||||||
|
rlength = cache.recv_lengths[node];
|
||||||
|
}
|
||||||
|
if (rlength > 0)
|
||||||
|
{
|
||||||
|
if (rlength > cache.recv_buf_caps[node])
|
||||||
|
{
|
||||||
|
if (cache.recv_bufs[node]) delete[] cache.recv_bufs[node];
|
||||||
|
cache.recv_bufs[node] = new double[rlength];
|
||||||
|
cache.recv_buf_caps[node] = rlength;
|
||||||
|
}
|
||||||
|
MPI_Irecv((void *)cache.recv_bufs[node], rlength, MPI_DOUBLE, node, 2, MPI_COMM_WORLD, cache.reqs + state.req_no++);
|
||||||
|
}
|
||||||
|
}
|
||||||
|
}
|
||||||
|
cache.lengths_valid = true;
|
||||||
|
}
|
||||||
|
// Sync_finish: wait for async MPI operations and unpack
|
||||||
|
void Parallel::Sync_finish(SyncCache &cache, AsyncSyncState &state,
|
||||||
|
MyList<var> *VarList, int Symmetry)
|
||||||
|
{
|
||||||
|
if (!state.active)
|
||||||
|
return;
|
||||||
|
|
||||||
|
MPI_Waitall(state.req_no, cache.reqs, cache.stats);
|
||||||
|
|
||||||
|
int cpusize = cache.cpusize;
|
||||||
|
MyList<Parallel::gridseg> **src = cache.combined_src;
|
||||||
|
MyList<Parallel::gridseg> **dst = cache.combined_dst;
|
||||||
|
|
||||||
|
for (int node = 0; node < cpusize; node++)
|
||||||
|
if (cache.recv_bufs[node] && cache.recv_lengths[node] > 0)
|
||||||
|
data_packer(cache.recv_bufs[node], src[node], dst[node], node, UNPACK, VarList, VarList, Symmetry);
|
||||||
|
|
||||||
|
state.active = false;
|
||||||
|
}
|
||||||
// collect buffer grid segments or blocks for the periodic boundary condition of given patch
|
// collect buffer grid segments or blocks for the periodic boundary condition of given patch
|
||||||
// ---------------------------------------------------
|
// ---------------------------------------------------
|
||||||
// |con | |con |
|
// |con | |con |
|
||||||
@@ -4844,6 +5286,203 @@ void Parallel::OutBdLow2Himix(MyList<Patch> *PatcL, MyList<Patch> *PatfL,
|
|||||||
delete[] transfer_src;
|
delete[] transfer_src;
|
||||||
delete[] transfer_dst;
|
delete[] transfer_dst;
|
||||||
}
|
}
|
||||||
|
|
||||||
|
// Restrict_cached: cache grid segment lists, reuse buffers via transfer_cached
|
||||||
|
void Parallel::Restrict_cached(MyList<Patch> *PatcL, MyList<Patch> *PatfL,
|
||||||
|
MyList<var> *VarList1, MyList<var> *VarList2,
|
||||||
|
int Symmetry, SyncCache &cache)
|
||||||
|
{
|
||||||
|
if (!cache.valid)
|
||||||
|
{
|
||||||
|
int cpusize;
|
||||||
|
MPI_Comm_size(MPI_COMM_WORLD, &cpusize);
|
||||||
|
cache.cpusize = cpusize;
|
||||||
|
|
||||||
|
if (!cache.combined_src)
|
||||||
|
{
|
||||||
|
cache.combined_src = new MyList<Parallel::gridseg> *[cpusize];
|
||||||
|
cache.combined_dst = new MyList<Parallel::gridseg> *[cpusize];
|
||||||
|
cache.send_lengths = new int[cpusize];
|
||||||
|
cache.recv_lengths = new int[cpusize];
|
||||||
|
cache.send_bufs = new double *[cpusize];
|
||||||
|
cache.recv_bufs = new double *[cpusize];
|
||||||
|
cache.send_buf_caps = new int[cpusize];
|
||||||
|
cache.recv_buf_caps = new int[cpusize];
|
||||||
|
for (int i = 0; i < cpusize; i++)
|
||||||
|
{
|
||||||
|
cache.send_bufs[i] = cache.recv_bufs[i] = 0;
|
||||||
|
cache.send_buf_caps[i] = cache.recv_buf_caps[i] = 0;
|
||||||
|
}
|
||||||
|
cache.max_reqs = 2 * cpusize;
|
||||||
|
cache.reqs = new MPI_Request[cache.max_reqs];
|
||||||
|
cache.stats = new MPI_Status[cache.max_reqs];
|
||||||
|
}
|
||||||
|
|
||||||
|
MyList<Parallel::gridseg> *dst = build_complete_gsl(PatcL);
|
||||||
|
for (int node = 0; node < cpusize; node++)
|
||||||
|
{
|
||||||
|
MyList<Parallel::gridseg> *src_owned = build_owned_gsl(PatfL, node, 2, Symmetry);
|
||||||
|
build_gstl(src_owned, dst, &cache.combined_src[node], &cache.combined_dst[node]);
|
||||||
|
if (src_owned) src_owned->destroyList();
|
||||||
|
}
|
||||||
|
if (dst) dst->destroyList();
|
||||||
|
|
||||||
|
cache.valid = true;
|
||||||
|
}
|
||||||
|
|
||||||
|
transfer_cached(cache.combined_src, cache.combined_dst, VarList1, VarList2, Symmetry, cache);
|
||||||
|
}
|
||||||
|
|
||||||
|
// OutBdLow2Hi_cached: cache grid segment lists, reuse buffers via transfer_cached
|
||||||
|
void Parallel::OutBdLow2Hi_cached(MyList<Patch> *PatcL, MyList<Patch> *PatfL,
|
||||||
|
MyList<var> *VarList1, MyList<var> *VarList2,
|
||||||
|
int Symmetry, SyncCache &cache)
|
||||||
|
{
|
||||||
|
if (!cache.valid)
|
||||||
|
{
|
||||||
|
int cpusize;
|
||||||
|
MPI_Comm_size(MPI_COMM_WORLD, &cpusize);
|
||||||
|
cache.cpusize = cpusize;
|
||||||
|
|
||||||
|
if (!cache.combined_src)
|
||||||
|
{
|
||||||
|
cache.combined_src = new MyList<Parallel::gridseg> *[cpusize];
|
||||||
|
cache.combined_dst = new MyList<Parallel::gridseg> *[cpusize];
|
||||||
|
cache.send_lengths = new int[cpusize];
|
||||||
|
cache.recv_lengths = new int[cpusize];
|
||||||
|
cache.send_bufs = new double *[cpusize];
|
||||||
|
cache.recv_bufs = new double *[cpusize];
|
||||||
|
cache.send_buf_caps = new int[cpusize];
|
||||||
|
cache.recv_buf_caps = new int[cpusize];
|
||||||
|
for (int i = 0; i < cpusize; i++)
|
||||||
|
{
|
||||||
|
cache.send_bufs[i] = cache.recv_bufs[i] = 0;
|
||||||
|
cache.send_buf_caps[i] = cache.recv_buf_caps[i] = 0;
|
||||||
|
}
|
||||||
|
cache.max_reqs = 2 * cpusize;
|
||||||
|
cache.reqs = new MPI_Request[cache.max_reqs];
|
||||||
|
cache.stats = new MPI_Status[cache.max_reqs];
|
||||||
|
}
|
||||||
|
|
||||||
|
MyList<Parallel::gridseg> *dst = build_buffer_gsl(PatfL);
|
||||||
|
for (int node = 0; node < cpusize; node++)
|
||||||
|
{
|
||||||
|
MyList<Parallel::gridseg> *src_owned = build_owned_gsl(PatcL, node, 4, Symmetry);
|
||||||
|
build_gstl(src_owned, dst, &cache.combined_src[node], &cache.combined_dst[node]);
|
||||||
|
if (src_owned) src_owned->destroyList();
|
||||||
|
}
|
||||||
|
if (dst) dst->destroyList();
|
||||||
|
|
||||||
|
cache.valid = true;
|
||||||
|
}
|
||||||
|
|
||||||
|
transfer_cached(cache.combined_src, cache.combined_dst, VarList1, VarList2, Symmetry, cache);
|
||||||
|
}
|
||||||
|
|
||||||
|
// OutBdLow2Himix_cached: same as OutBdLow2Hi_cached but uses transfermix for unpacking
|
||||||
|
void Parallel::OutBdLow2Himix_cached(MyList<Patch> *PatcL, MyList<Patch> *PatfL,
|
||||||
|
MyList<var> *VarList1, MyList<var> *VarList2,
|
||||||
|
int Symmetry, SyncCache &cache)
|
||||||
|
{
|
||||||
|
if (!cache.valid)
|
||||||
|
{
|
||||||
|
int cpusize;
|
||||||
|
MPI_Comm_size(MPI_COMM_WORLD, &cpusize);
|
||||||
|
cache.cpusize = cpusize;
|
||||||
|
|
||||||
|
if (!cache.combined_src)
|
||||||
|
{
|
||||||
|
cache.combined_src = new MyList<Parallel::gridseg> *[cpusize];
|
||||||
|
cache.combined_dst = new MyList<Parallel::gridseg> *[cpusize];
|
||||||
|
cache.send_lengths = new int[cpusize];
|
||||||
|
cache.recv_lengths = new int[cpusize];
|
||||||
|
cache.send_bufs = new double *[cpusize];
|
||||||
|
cache.recv_bufs = new double *[cpusize];
|
||||||
|
cache.send_buf_caps = new int[cpusize];
|
||||||
|
cache.recv_buf_caps = new int[cpusize];
|
||||||
|
for (int i = 0; i < cpusize; i++)
|
||||||
|
{
|
||||||
|
cache.send_bufs[i] = cache.recv_bufs[i] = 0;
|
||||||
|
cache.send_buf_caps[i] = cache.recv_buf_caps[i] = 0;
|
||||||
|
}
|
||||||
|
cache.max_reqs = 2 * cpusize;
|
||||||
|
cache.reqs = new MPI_Request[cache.max_reqs];
|
||||||
|
cache.stats = new MPI_Status[cache.max_reqs];
|
||||||
|
}
|
||||||
|
|
||||||
|
MyList<Parallel::gridseg> *dst = build_buffer_gsl(PatfL);
|
||||||
|
for (int node = 0; node < cpusize; node++)
|
||||||
|
{
|
||||||
|
MyList<Parallel::gridseg> *src_owned = build_owned_gsl(PatcL, node, 4, Symmetry);
|
||||||
|
build_gstl(src_owned, dst, &cache.combined_src[node], &cache.combined_dst[node]);
|
||||||
|
if (src_owned) src_owned->destroyList();
|
||||||
|
}
|
||||||
|
if (dst) dst->destroyList();
|
||||||
|
|
||||||
|
cache.valid = true;
|
||||||
|
}
|
||||||
|
|
||||||
|
// Use transfermix instead of transfer for mix-mode interpolation
|
||||||
|
int myrank;
|
||||||
|
MPI_Comm_size(MPI_COMM_WORLD, &cache.cpusize);
|
||||||
|
MPI_Comm_rank(MPI_COMM_WORLD, &myrank);
|
||||||
|
int cpusize = cache.cpusize;
|
||||||
|
|
||||||
|
int req_no = 0;
|
||||||
|
for (int node = 0; node < cpusize; node++)
|
||||||
|
{
|
||||||
|
if (node == myrank)
|
||||||
|
{
|
||||||
|
int length = data_packermix(0, cache.combined_src[myrank], cache.combined_dst[myrank], node, PACK, VarList1, VarList2, Symmetry);
|
||||||
|
cache.recv_lengths[node] = length;
|
||||||
|
if (length > 0)
|
||||||
|
{
|
||||||
|
if (length > cache.recv_buf_caps[node])
|
||||||
|
{
|
||||||
|
if (cache.recv_bufs[node]) delete[] cache.recv_bufs[node];
|
||||||
|
cache.recv_bufs[node] = new double[length];
|
||||||
|
cache.recv_buf_caps[node] = length;
|
||||||
|
}
|
||||||
|
data_packermix(cache.recv_bufs[node], cache.combined_src[myrank], cache.combined_dst[myrank], node, PACK, VarList1, VarList2, Symmetry);
|
||||||
|
}
|
||||||
|
}
|
||||||
|
else
|
||||||
|
{
|
||||||
|
int slength = data_packermix(0, cache.combined_src[myrank], cache.combined_dst[myrank], node, PACK, VarList1, VarList2, Symmetry);
|
||||||
|
cache.send_lengths[node] = slength;
|
||||||
|
if (slength > 0)
|
||||||
|
{
|
||||||
|
if (slength > cache.send_buf_caps[node])
|
||||||
|
{
|
||||||
|
if (cache.send_bufs[node]) delete[] cache.send_bufs[node];
|
||||||
|
cache.send_bufs[node] = new double[slength];
|
||||||
|
cache.send_buf_caps[node] = slength;
|
||||||
|
}
|
||||||
|
data_packermix(cache.send_bufs[node], cache.combined_src[myrank], cache.combined_dst[myrank], node, PACK, VarList1, VarList2, Symmetry);
|
||||||
|
MPI_Isend((void *)cache.send_bufs[node], slength, MPI_DOUBLE, node, 1, MPI_COMM_WORLD, cache.reqs + req_no++);
|
||||||
|
}
|
||||||
|
int rlength = data_packermix(0, cache.combined_src[node], cache.combined_dst[node], node, UNPACK, VarList1, VarList2, Symmetry);
|
||||||
|
cache.recv_lengths[node] = rlength;
|
||||||
|
if (rlength > 0)
|
||||||
|
{
|
||||||
|
if (rlength > cache.recv_buf_caps[node])
|
||||||
|
{
|
||||||
|
if (cache.recv_bufs[node]) delete[] cache.recv_bufs[node];
|
||||||
|
cache.recv_bufs[node] = new double[rlength];
|
||||||
|
cache.recv_buf_caps[node] = rlength;
|
||||||
|
}
|
||||||
|
MPI_Irecv((void *)cache.recv_bufs[node], rlength, MPI_DOUBLE, node, 1, MPI_COMM_WORLD, cache.reqs + req_no++);
|
||||||
|
}
|
||||||
|
}
|
||||||
|
}
|
||||||
|
|
||||||
|
MPI_Waitall(req_no, cache.reqs, cache.stats);
|
||||||
|
|
||||||
|
for (int node = 0; node < cpusize; node++)
|
||||||
|
if (cache.recv_bufs[node] && cache.recv_lengths[node] > 0)
|
||||||
|
data_packermix(cache.recv_bufs[node], cache.combined_src[node], cache.combined_dst[node], node, UNPACK, VarList1, VarList2, Symmetry);
|
||||||
|
}
|
||||||
|
|
||||||
// collect all buffer grid segments or blocks for given patch
|
// collect all buffer grid segments or blocks for given patch
|
||||||
MyList<Parallel::gridseg> *Parallel::build_buffer_gsl(Patch *Pat)
|
MyList<Parallel::gridseg> *Parallel::build_buffer_gsl(Patch *Pat)
|
||||||
{
|
{
|
||||||
|
|||||||
@@ -81,6 +81,43 @@ namespace Parallel
|
|||||||
int Symmetry);
|
int Symmetry);
|
||||||
void Sync(Patch *Pat, MyList<var> *VarList, int Symmetry);
|
void Sync(Patch *Pat, MyList<var> *VarList, int Symmetry);
|
||||||
void Sync(MyList<Patch> *PatL, MyList<var> *VarList, int Symmetry);
|
void Sync(MyList<Patch> *PatL, MyList<var> *VarList, int Symmetry);
|
||||||
|
void Sync_merged(MyList<Patch> *PatL, MyList<var> *VarList, int Symmetry);
|
||||||
|
|
||||||
|
struct SyncCache {
|
||||||
|
bool valid;
|
||||||
|
int cpusize;
|
||||||
|
MyList<gridseg> **combined_src;
|
||||||
|
MyList<gridseg> **combined_dst;
|
||||||
|
int *send_lengths;
|
||||||
|
int *recv_lengths;
|
||||||
|
double **send_bufs;
|
||||||
|
double **recv_bufs;
|
||||||
|
int *send_buf_caps;
|
||||||
|
int *recv_buf_caps;
|
||||||
|
MPI_Request *reqs;
|
||||||
|
MPI_Status *stats;
|
||||||
|
int max_reqs;
|
||||||
|
bool lengths_valid;
|
||||||
|
SyncCache();
|
||||||
|
void invalidate();
|
||||||
|
void destroy();
|
||||||
|
};
|
||||||
|
|
||||||
|
void Sync_cached(MyList<Patch> *PatL, MyList<var> *VarList, int Symmetry, SyncCache &cache);
|
||||||
|
void transfer_cached(MyList<gridseg> **src, MyList<gridseg> **dst,
|
||||||
|
MyList<var> *VarList1, MyList<var> *VarList2,
|
||||||
|
int Symmetry, SyncCache &cache);
|
||||||
|
|
||||||
|
struct AsyncSyncState {
|
||||||
|
int req_no;
|
||||||
|
bool active;
|
||||||
|
AsyncSyncState() : req_no(0), active(false) {}
|
||||||
|
};
|
||||||
|
|
||||||
|
void Sync_start(MyList<Patch> *PatL, MyList<var> *VarList, int Symmetry,
|
||||||
|
SyncCache &cache, AsyncSyncState &state);
|
||||||
|
void Sync_finish(SyncCache &cache, AsyncSyncState &state,
|
||||||
|
MyList<var> *VarList, int Symmetry);
|
||||||
void OutBdLow2Hi(Patch *Patc, Patch *Patf,
|
void OutBdLow2Hi(Patch *Patc, Patch *Patf,
|
||||||
MyList<var> *VarList1 /* source */, MyList<var> *VarList2 /* target */,
|
MyList<var> *VarList1 /* source */, MyList<var> *VarList2 /* target */,
|
||||||
int Symmetry);
|
int Symmetry);
|
||||||
@@ -93,6 +130,15 @@ namespace Parallel
|
|||||||
void OutBdLow2Himix(MyList<Patch> *PatcL, MyList<Patch> *PatfL,
|
void OutBdLow2Himix(MyList<Patch> *PatcL, MyList<Patch> *PatfL,
|
||||||
MyList<var> *VarList1 /* source */, MyList<var> *VarList2 /* target */,
|
MyList<var> *VarList1 /* source */, MyList<var> *VarList2 /* target */,
|
||||||
int Symmetry);
|
int Symmetry);
|
||||||
|
void Restrict_cached(MyList<Patch> *PatcL, MyList<Patch> *PatfL,
|
||||||
|
MyList<var> *VarList1, MyList<var> *VarList2,
|
||||||
|
int Symmetry, SyncCache &cache);
|
||||||
|
void OutBdLow2Hi_cached(MyList<Patch> *PatcL, MyList<Patch> *PatfL,
|
||||||
|
MyList<var> *VarList1, MyList<var> *VarList2,
|
||||||
|
int Symmetry, SyncCache &cache);
|
||||||
|
void OutBdLow2Himix_cached(MyList<Patch> *PatcL, MyList<Patch> *PatfL,
|
||||||
|
MyList<var> *VarList1, MyList<var> *VarList2,
|
||||||
|
int Symmetry, SyncCache &cache);
|
||||||
void Prolong(Patch *Patc, Patch *Patf,
|
void Prolong(Patch *Patc, Patch *Patf,
|
||||||
MyList<var> *VarList1 /* source */, MyList<var> *VarList2 /* target */,
|
MyList<var> *VarList1 /* source */, MyList<var> *VarList2 /* target */,
|
||||||
int Symmetry);
|
int Symmetry);
|
||||||
|
|||||||
@@ -321,22 +321,7 @@ void Z4c_class::Step(int lev, int YN)
|
|||||||
}
|
}
|
||||||
Pp = Pp->next;
|
Pp = Pp->next;
|
||||||
}
|
}
|
||||||
// check error information
|
// NOTE: error check deferred to after Shell Patch computation to reduce MPI_Allreduce calls
|
||||||
{
|
|
||||||
int erh = ERROR;
|
|
||||||
MPI_Allreduce(&erh, &ERROR, 1, MPI_INT, MPI_SUM, MPI_COMM_WORLD);
|
|
||||||
}
|
|
||||||
if (ERROR)
|
|
||||||
{
|
|
||||||
Parallel::Dump_Data(GH->PatL[lev], StateList, 0, PhysTime, dT_lev);
|
|
||||||
if (myrank == 0)
|
|
||||||
{
|
|
||||||
if (ErrorMonitor->outfile)
|
|
||||||
ErrorMonitor->outfile << "find NaN in state variables at t = " << PhysTime
|
|
||||||
<< ", lev = " << lev << endl;
|
|
||||||
MPI_Abort(MPI_COMM_WORLD, 1);
|
|
||||||
}
|
|
||||||
}
|
|
||||||
|
|
||||||
#ifdef WithShell
|
#ifdef WithShell
|
||||||
// evolve Shell Patches
|
// evolve Shell Patches
|
||||||
@@ -468,24 +453,16 @@ void Z4c_class::Step(int lev, int YN)
|
|||||||
sPp = sPp->next;
|
sPp = sPp->next;
|
||||||
}
|
}
|
||||||
}
|
}
|
||||||
// check error information
|
// Non-blocking error reduction overlapped with Sync to hide Allreduce latency
|
||||||
|
MPI_Request err_req_pre;
|
||||||
{
|
{
|
||||||
int erh = ERROR;
|
int erh = ERROR;
|
||||||
MPI_Allreduce(&erh, &ERROR, 1, MPI_INT, MPI_SUM, MPI_COMM_WORLD);
|
MPI_Iallreduce(&erh, &ERROR, 1, MPI_INT, MPI_SUM, MPI_COMM_WORLD, &err_req_pre);
|
||||||
}
|
|
||||||
if (ERROR)
|
|
||||||
{
|
|
||||||
SH->Dump_Data(StateList, 0, PhysTime, dT_lev);
|
|
||||||
if (myrank == 0)
|
|
||||||
{
|
|
||||||
if (ErrorMonitor->outfile)
|
|
||||||
ErrorMonitor->outfile << "find NaN in state variables on Shell Patches at t = " << PhysTime << endl;
|
|
||||||
MPI_Abort(MPI_COMM_WORLD, 1);
|
|
||||||
}
|
|
||||||
}
|
}
|
||||||
#endif
|
#endif
|
||||||
|
|
||||||
Parallel::Sync(GH->PatL[lev], SynchList_pre, Symmetry);
|
Parallel::AsyncSyncState async_pre;
|
||||||
|
Parallel::Sync_start(GH->PatL[lev], SynchList_pre, Symmetry, sync_cache_pre[lev], async_pre);
|
||||||
|
|
||||||
#ifdef WithShell
|
#ifdef WithShell
|
||||||
if (lev == 0)
|
if (lev == 0)
|
||||||
@@ -504,6 +481,24 @@ void Z4c_class::Step(int lev, int YN)
|
|||||||
}
|
}
|
||||||
}
|
}
|
||||||
#endif
|
#endif
|
||||||
|
Parallel::Sync_finish(sync_cache_pre[lev], async_pre, SynchList_pre, Symmetry);
|
||||||
|
|
||||||
|
#ifdef WithShell
|
||||||
|
// Complete non-blocking error reduction and check
|
||||||
|
MPI_Wait(&err_req_pre, MPI_STATUS_IGNORE);
|
||||||
|
if (ERROR)
|
||||||
|
{
|
||||||
|
Parallel::Dump_Data(GH->PatL[lev], StateList, 0, PhysTime, dT_lev);
|
||||||
|
SH->Dump_Data(StateList, 0, PhysTime, dT_lev);
|
||||||
|
if (myrank == 0)
|
||||||
|
{
|
||||||
|
if (ErrorMonitor->outfile)
|
||||||
|
ErrorMonitor->outfile << "find NaN in state variables at t = " << PhysTime
|
||||||
|
<< ", lev = " << lev << endl;
|
||||||
|
MPI_Abort(MPI_COMM_WORLD, 1);
|
||||||
|
}
|
||||||
|
}
|
||||||
|
#endif
|
||||||
|
|
||||||
// for black hole position
|
// for black hole position
|
||||||
if (BH_num > 0 && lev == GH->levels - 1)
|
if (BH_num > 0 && lev == GH->levels - 1)
|
||||||
@@ -693,23 +688,7 @@ void Z4c_class::Step(int lev, int YN)
|
|||||||
Pp = Pp->next;
|
Pp = Pp->next;
|
||||||
}
|
}
|
||||||
|
|
||||||
// check error information
|
// NOTE: error check deferred to after Shell Patch computation to reduce MPI_Allreduce calls
|
||||||
{
|
|
||||||
int erh = ERROR;
|
|
||||||
MPI_Allreduce(&erh, &ERROR, 1, MPI_INT, MPI_SUM, MPI_COMM_WORLD);
|
|
||||||
}
|
|
||||||
if (ERROR)
|
|
||||||
{
|
|
||||||
Parallel::Dump_Data(GH->PatL[lev], SynchList_pre, 0, PhysTime, dT_lev);
|
|
||||||
if (myrank == 0)
|
|
||||||
{
|
|
||||||
if (ErrorMonitor->outfile)
|
|
||||||
ErrorMonitor->outfile << "find NaN in RK4 substep#" << iter_count
|
|
||||||
<< " variables at t = " << PhysTime
|
|
||||||
<< ", lev = " << lev << endl;
|
|
||||||
MPI_Abort(MPI_COMM_WORLD, 1);
|
|
||||||
}
|
|
||||||
}
|
|
||||||
|
|
||||||
#ifdef WithShell
|
#ifdef WithShell
|
||||||
// evolve Shell Patches
|
// evolve Shell Patches
|
||||||
@@ -850,25 +829,16 @@ void Z4c_class::Step(int lev, int YN)
|
|||||||
sPp = sPp->next;
|
sPp = sPp->next;
|
||||||
}
|
}
|
||||||
}
|
}
|
||||||
// check error information
|
// Non-blocking error reduction overlapped with Sync to hide Allreduce latency
|
||||||
|
MPI_Request err_req_cor;
|
||||||
{
|
{
|
||||||
int erh = ERROR;
|
int erh = ERROR;
|
||||||
MPI_Allreduce(&erh, &ERROR, 1, MPI_INT, MPI_SUM, MPI_COMM_WORLD);
|
MPI_Iallreduce(&erh, &ERROR, 1, MPI_INT, MPI_SUM, MPI_COMM_WORLD, &err_req_cor);
|
||||||
}
|
|
||||||
if (ERROR)
|
|
||||||
{
|
|
||||||
SH->Dump_Data(SynchList_pre, 0, PhysTime, dT_lev);
|
|
||||||
if (myrank == 0)
|
|
||||||
{
|
|
||||||
if (ErrorMonitor->outfile)
|
|
||||||
ErrorMonitor->outfile << "find NaN on Shell Patches in RK4 substep#" << iter_count
|
|
||||||
<< " variables at t = " << PhysTime << endl;
|
|
||||||
MPI_Abort(MPI_COMM_WORLD, 1);
|
|
||||||
}
|
|
||||||
}
|
}
|
||||||
#endif
|
#endif
|
||||||
|
|
||||||
Parallel::Sync(GH->PatL[lev], SynchList_cor, Symmetry);
|
Parallel::AsyncSyncState async_cor;
|
||||||
|
Parallel::Sync_start(GH->PatL[lev], SynchList_cor, Symmetry, sync_cache_cor[lev], async_cor);
|
||||||
|
|
||||||
#ifdef WithShell
|
#ifdef WithShell
|
||||||
if (lev == 0)
|
if (lev == 0)
|
||||||
@@ -886,6 +856,25 @@ void Z4c_class::Step(int lev, int YN)
|
|||||||
<< " seconds! " << endl;
|
<< " seconds! " << endl;
|
||||||
}
|
}
|
||||||
}
|
}
|
||||||
|
#endif
|
||||||
|
Parallel::Sync_finish(sync_cache_cor[lev], async_cor, SynchList_cor, Symmetry);
|
||||||
|
|
||||||
|
#ifdef WithShell
|
||||||
|
// Complete non-blocking error reduction and check
|
||||||
|
MPI_Wait(&err_req_cor, MPI_STATUS_IGNORE);
|
||||||
|
if (ERROR)
|
||||||
|
{
|
||||||
|
Parallel::Dump_Data(GH->PatL[lev], SynchList_pre, 0, PhysTime, dT_lev);
|
||||||
|
SH->Dump_Data(SynchList_pre, 0, PhysTime, dT_lev);
|
||||||
|
if (myrank == 0)
|
||||||
|
{
|
||||||
|
if (ErrorMonitor->outfile)
|
||||||
|
ErrorMonitor->outfile << "find NaN in RK4 substep#" << iter_count
|
||||||
|
<< " variables at t = " << PhysTime
|
||||||
|
<< ", lev = " << lev << endl;
|
||||||
|
MPI_Abort(MPI_COMM_WORLD, 1);
|
||||||
|
}
|
||||||
|
}
|
||||||
#endif
|
#endif
|
||||||
// for black hole position
|
// for black hole position
|
||||||
if (BH_num > 0 && lev == GH->levels - 1)
|
if (BH_num > 0 && lev == GH->levels - 1)
|
||||||
@@ -1252,22 +1241,7 @@ void Z4c_class::Step(int lev, int YN)
|
|||||||
}
|
}
|
||||||
}
|
}
|
||||||
#endif
|
#endif
|
||||||
// check error information
|
// NOTE: error check deferred to after Shell Patch computation to reduce MPI_Allreduce calls
|
||||||
{
|
|
||||||
int erh = ERROR;
|
|
||||||
MPI_Allreduce(&erh, &ERROR, 1, MPI_INT, MPI_SUM, MPI_COMM_WORLD);
|
|
||||||
}
|
|
||||||
if (ERROR)
|
|
||||||
{
|
|
||||||
Parallel::Dump_Data(GH->PatL[lev], StateList, 0, PhysTime, dT_lev);
|
|
||||||
if (myrank == 0)
|
|
||||||
{
|
|
||||||
if (ErrorMonitor->outfile)
|
|
||||||
ErrorMonitor->outfile << "find NaN in state variables at t = " << PhysTime
|
|
||||||
<< ", lev = " << lev << endl;
|
|
||||||
MPI_Abort(MPI_COMM_WORLD, 1);
|
|
||||||
}
|
|
||||||
}
|
|
||||||
|
|
||||||
// evolve Shell Patches
|
// evolve Shell Patches
|
||||||
if (lev == 0)
|
if (lev == 0)
|
||||||
@@ -1542,23 +1516,15 @@ void Z4c_class::Step(int lev, int YN)
|
|||||||
}
|
}
|
||||||
#endif
|
#endif
|
||||||
}
|
}
|
||||||
// check error information
|
// Non-blocking error reduction overlapped with Sync to hide Allreduce latency
|
||||||
|
MPI_Request err_req_pre;
|
||||||
{
|
{
|
||||||
int erh = ERROR;
|
int erh = ERROR;
|
||||||
MPI_Allreduce(&erh, &ERROR, 1, MPI_INT, MPI_SUM, MPI_COMM_WORLD);
|
MPI_Iallreduce(&erh, &ERROR, 1, MPI_INT, MPI_SUM, MPI_COMM_WORLD, &err_req_pre);
|
||||||
}
|
|
||||||
if (ERROR)
|
|
||||||
{
|
|
||||||
SH->Dump_Data(StateList, 0, PhysTime, dT_lev);
|
|
||||||
if (myrank == 0)
|
|
||||||
{
|
|
||||||
if (ErrorMonitor->outfile)
|
|
||||||
ErrorMonitor->outfile << "find NaN in state variables on Shell Patches at t = " << PhysTime << endl;
|
|
||||||
MPI_Abort(MPI_COMM_WORLD, 1);
|
|
||||||
}
|
|
||||||
}
|
}
|
||||||
|
|
||||||
Parallel::Sync(GH->PatL[lev], SynchList_pre, Symmetry);
|
Parallel::AsyncSyncState async_pre;
|
||||||
|
Parallel::Sync_start(GH->PatL[lev], SynchList_pre, Symmetry, sync_cache_pre[lev], async_pre);
|
||||||
|
|
||||||
if (lev == 0)
|
if (lev == 0)
|
||||||
{
|
{
|
||||||
@@ -1620,6 +1586,22 @@ void Z4c_class::Step(int lev, int YN)
|
|||||||
}
|
}
|
||||||
#endif
|
#endif
|
||||||
}
|
}
|
||||||
|
Parallel::Sync_finish(sync_cache_pre[lev], async_pre, SynchList_pre, Symmetry);
|
||||||
|
|
||||||
|
// Complete non-blocking error reduction and check
|
||||||
|
MPI_Wait(&err_req_pre, MPI_STATUS_IGNORE);
|
||||||
|
if (ERROR)
|
||||||
|
{
|
||||||
|
Parallel::Dump_Data(GH->PatL[lev], StateList, 0, PhysTime, dT_lev);
|
||||||
|
SH->Dump_Data(StateList, 0, PhysTime, dT_lev);
|
||||||
|
if (myrank == 0)
|
||||||
|
{
|
||||||
|
if (ErrorMonitor->outfile)
|
||||||
|
ErrorMonitor->outfile << "find NaN in state variables at t = " << PhysTime
|
||||||
|
<< ", lev = " << lev << endl;
|
||||||
|
MPI_Abort(MPI_COMM_WORLD, 1);
|
||||||
|
}
|
||||||
|
}
|
||||||
|
|
||||||
// for black hole position
|
// for black hole position
|
||||||
if (BH_num > 0 && lev == GH->levels - 1)
|
if (BH_num > 0 && lev == GH->levels - 1)
|
||||||
@@ -1841,23 +1823,7 @@ void Z4c_class::Step(int lev, int YN)
|
|||||||
Pp = Pp->next;
|
Pp = Pp->next;
|
||||||
}
|
}
|
||||||
|
|
||||||
// check error information
|
// NOTE: error check deferred to after Shell Patch computation to reduce MPI_Allreduce calls
|
||||||
{
|
|
||||||
int erh = ERROR;
|
|
||||||
MPI_Allreduce(&erh, &ERROR, 1, MPI_INT, MPI_SUM, MPI_COMM_WORLD);
|
|
||||||
}
|
|
||||||
if (ERROR)
|
|
||||||
{
|
|
||||||
Parallel::Dump_Data(GH->PatL[lev], SynchList_pre, 0, PhysTime, dT_lev);
|
|
||||||
if (myrank == 0)
|
|
||||||
{
|
|
||||||
if (ErrorMonitor->outfile)
|
|
||||||
ErrorMonitor->outfile << "find NaN in RK4 substep#" << iter_count
|
|
||||||
<< " variables at t = " << PhysTime
|
|
||||||
<< ", lev = " << lev << endl;
|
|
||||||
MPI_Abort(MPI_COMM_WORLD, 1);
|
|
||||||
}
|
|
||||||
}
|
|
||||||
|
|
||||||
// evolve Shell Patches
|
// evolve Shell Patches
|
||||||
if (lev == 0)
|
if (lev == 0)
|
||||||
@@ -2103,24 +2069,15 @@ void Z4c_class::Step(int lev, int YN)
|
|||||||
sPp = sPp->next;
|
sPp = sPp->next;
|
||||||
}
|
}
|
||||||
}
|
}
|
||||||
// check error information
|
// Non-blocking error reduction overlapped with Sync to hide Allreduce latency
|
||||||
|
MPI_Request err_req_cor;
|
||||||
{
|
{
|
||||||
int erh = ERROR;
|
int erh = ERROR;
|
||||||
MPI_Allreduce(&erh, &ERROR, 1, MPI_INT, MPI_SUM, MPI_COMM_WORLD);
|
MPI_Iallreduce(&erh, &ERROR, 1, MPI_INT, MPI_SUM, MPI_COMM_WORLD, &err_req_cor);
|
||||||
}
|
|
||||||
if (ERROR)
|
|
||||||
{
|
|
||||||
SH->Dump_Data(SynchList_pre, 0, PhysTime, dT_lev);
|
|
||||||
if (myrank == 0)
|
|
||||||
{
|
|
||||||
if (ErrorMonitor->outfile)
|
|
||||||
ErrorMonitor->outfile << "find NaN on Shell Patches in RK4 substep#" << iter_count
|
|
||||||
<< " variables at t = " << PhysTime << endl;
|
|
||||||
MPI_Abort(MPI_COMM_WORLD, 1);
|
|
||||||
}
|
|
||||||
}
|
}
|
||||||
|
|
||||||
Parallel::Sync(GH->PatL[lev], SynchList_cor, Symmetry);
|
Parallel::AsyncSyncState async_cor;
|
||||||
|
Parallel::Sync_start(GH->PatL[lev], SynchList_cor, Symmetry, sync_cache_cor[lev], async_cor);
|
||||||
|
|
||||||
if (lev == 0)
|
if (lev == 0)
|
||||||
{
|
{
|
||||||
@@ -2170,6 +2127,23 @@ void Z4c_class::Step(int lev, int YN)
|
|||||||
}
|
}
|
||||||
// end smooth
|
// end smooth
|
||||||
#endif
|
#endif
|
||||||
|
Parallel::Sync_finish(sync_cache_cor[lev], async_cor, SynchList_cor, Symmetry);
|
||||||
|
|
||||||
|
// Complete non-blocking error reduction and check
|
||||||
|
MPI_Wait(&err_req_cor, MPI_STATUS_IGNORE);
|
||||||
|
if (ERROR)
|
||||||
|
{
|
||||||
|
Parallel::Dump_Data(GH->PatL[lev], SynchList_pre, 0, PhysTime, dT_lev);
|
||||||
|
SH->Dump_Data(SynchList_pre, 0, PhysTime, dT_lev);
|
||||||
|
if (myrank == 0)
|
||||||
|
{
|
||||||
|
if (ErrorMonitor->outfile)
|
||||||
|
ErrorMonitor->outfile << "find NaN in RK4 substep#" << iter_count
|
||||||
|
<< " variables at t = " << PhysTime
|
||||||
|
<< ", lev = " << lev << endl;
|
||||||
|
MPI_Abort(MPI_COMM_WORLD, 1);
|
||||||
|
}
|
||||||
|
}
|
||||||
|
|
||||||
// for black hole position
|
// for black hole position
|
||||||
if (BH_num > 0 && lev == GH->levels - 1)
|
if (BH_num > 0 && lev == GH->levels - 1)
|
||||||
|
|||||||
@@ -730,6 +730,12 @@ void bssn_class::Initialize()
|
|||||||
PhysTime = StartTime;
|
PhysTime = StartTime;
|
||||||
Setup_Black_Hole_position();
|
Setup_Black_Hole_position();
|
||||||
}
|
}
|
||||||
|
|
||||||
|
// Initialize sync caches (per-level, for predictor and corrector)
|
||||||
|
sync_cache_pre = new Parallel::SyncCache[GH->levels];
|
||||||
|
sync_cache_cor = new Parallel::SyncCache[GH->levels];
|
||||||
|
sync_cache_rp_coarse = new Parallel::SyncCache[GH->levels];
|
||||||
|
sync_cache_rp_fine = new Parallel::SyncCache[GH->levels];
|
||||||
}
|
}
|
||||||
|
|
||||||
//================================================================================================
|
//================================================================================================
|
||||||
@@ -981,6 +987,32 @@ bssn_class::~bssn_class()
|
|||||||
delete Azzz;
|
delete Azzz;
|
||||||
#endif
|
#endif
|
||||||
|
|
||||||
|
// Destroy sync caches before GH
|
||||||
|
if (sync_cache_pre)
|
||||||
|
{
|
||||||
|
for (int i = 0; i < GH->levels; i++)
|
||||||
|
sync_cache_pre[i].destroy();
|
||||||
|
delete[] sync_cache_pre;
|
||||||
|
}
|
||||||
|
if (sync_cache_cor)
|
||||||
|
{
|
||||||
|
for (int i = 0; i < GH->levels; i++)
|
||||||
|
sync_cache_cor[i].destroy();
|
||||||
|
delete[] sync_cache_cor;
|
||||||
|
}
|
||||||
|
if (sync_cache_rp_coarse)
|
||||||
|
{
|
||||||
|
for (int i = 0; i < GH->levels; i++)
|
||||||
|
sync_cache_rp_coarse[i].destroy();
|
||||||
|
delete[] sync_cache_rp_coarse;
|
||||||
|
}
|
||||||
|
if (sync_cache_rp_fine)
|
||||||
|
{
|
||||||
|
for (int i = 0; i < GH->levels; i++)
|
||||||
|
sync_cache_rp_fine[i].destroy();
|
||||||
|
delete[] sync_cache_rp_fine;
|
||||||
|
}
|
||||||
|
|
||||||
delete GH;
|
delete GH;
|
||||||
#ifdef WithShell
|
#ifdef WithShell
|
||||||
delete SH;
|
delete SH;
|
||||||
@@ -2181,6 +2213,7 @@ void bssn_class::Evolve(int Steps)
|
|||||||
GH->Regrid(Symmetry, BH_num, Porgbr, Porg0,
|
GH->Regrid(Symmetry, BH_num, Porgbr, Porg0,
|
||||||
SynchList_cor, OldStateList, StateList, SynchList_pre,
|
SynchList_cor, OldStateList, StateList, SynchList_pre,
|
||||||
fgt(PhysTime - dT_mon, StartTime, dT_mon / 2), ErrorMonitor);
|
fgt(PhysTime - dT_mon, StartTime, dT_mon / 2), ErrorMonitor);
|
||||||
|
for (int il = 0; il < GH->levels; il++) { sync_cache_pre[il].invalidate(); sync_cache_cor[il].invalidate(); sync_cache_rp_coarse[il].invalidate(); sync_cache_rp_fine[il].invalidate(); }
|
||||||
#endif
|
#endif
|
||||||
|
|
||||||
#if (REGLEV == 0 && (PSTR == 1 || PSTR == 2))
|
#if (REGLEV == 0 && (PSTR == 1 || PSTR == 2))
|
||||||
@@ -2396,6 +2429,7 @@ void bssn_class::RecursiveStep(int lev)
|
|||||||
GH->Regrid_Onelevel(lev, Symmetry, BH_num, Porgbr, Porg0,
|
GH->Regrid_Onelevel(lev, Symmetry, BH_num, Porgbr, Porg0,
|
||||||
SynchList_cor, OldStateList, StateList, SynchList_pre,
|
SynchList_cor, OldStateList, StateList, SynchList_pre,
|
||||||
fgt(PhysTime - dT_lev, StartTime, dT_lev / 2), ErrorMonitor);
|
fgt(PhysTime - dT_lev, StartTime, dT_lev / 2), ErrorMonitor);
|
||||||
|
for (int il = 0; il < GH->levels; il++) { sync_cache_pre[il].invalidate(); sync_cache_cor[il].invalidate(); sync_cache_rp_coarse[il].invalidate(); sync_cache_rp_fine[il].invalidate(); }
|
||||||
#endif
|
#endif
|
||||||
}
|
}
|
||||||
|
|
||||||
@@ -2574,6 +2608,7 @@ void bssn_class::ParallelStep()
|
|||||||
GH->Regrid_Onelevel(GH->mylev, Symmetry, BH_num, Porgbr, Porg0,
|
GH->Regrid_Onelevel(GH->mylev, Symmetry, BH_num, Porgbr, Porg0,
|
||||||
SynchList_cor, OldStateList, StateList, SynchList_pre,
|
SynchList_cor, OldStateList, StateList, SynchList_pre,
|
||||||
fgt(PhysTime - dT_lev, StartTime, dT_lev / 2), ErrorMonitor);
|
fgt(PhysTime - dT_lev, StartTime, dT_lev / 2), ErrorMonitor);
|
||||||
|
for (int il = 0; il < GH->levels; il++) { sync_cache_pre[il].invalidate(); sync_cache_cor[il].invalidate(); sync_cache_rp_coarse[il].invalidate(); sync_cache_rp_fine[il].invalidate(); }
|
||||||
#endif
|
#endif
|
||||||
}
|
}
|
||||||
|
|
||||||
@@ -2740,6 +2775,7 @@ void bssn_class::ParallelStep()
|
|||||||
GH->Regrid_Onelevel(lev + 1, Symmetry, BH_num, Porgbr, Porg0,
|
GH->Regrid_Onelevel(lev + 1, Symmetry, BH_num, Porgbr, Porg0,
|
||||||
SynchList_cor, OldStateList, StateList, SynchList_pre,
|
SynchList_cor, OldStateList, StateList, SynchList_pre,
|
||||||
fgt(PhysTime - dT_levp1, StartTime, dT_levp1 / 2), ErrorMonitor);
|
fgt(PhysTime - dT_levp1, StartTime, dT_levp1 / 2), ErrorMonitor);
|
||||||
|
for (int il = 0; il < GH->levels; il++) { sync_cache_pre[il].invalidate(); sync_cache_cor[il].invalidate(); sync_cache_rp_coarse[il].invalidate(); sync_cache_rp_fine[il].invalidate(); }
|
||||||
|
|
||||||
// a_stream.clear();
|
// a_stream.clear();
|
||||||
// a_stream.str("");
|
// a_stream.str("");
|
||||||
@@ -2754,6 +2790,7 @@ void bssn_class::ParallelStep()
|
|||||||
GH->Regrid_Onelevel(lev, Symmetry, BH_num, Porgbr, Porg0,
|
GH->Regrid_Onelevel(lev, Symmetry, BH_num, Porgbr, Porg0,
|
||||||
SynchList_cor, OldStateList, StateList, SynchList_pre,
|
SynchList_cor, OldStateList, StateList, SynchList_pre,
|
||||||
fgt(PhysTime - dT_lev, StartTime, dT_lev / 2), ErrorMonitor);
|
fgt(PhysTime - dT_lev, StartTime, dT_lev / 2), ErrorMonitor);
|
||||||
|
for (int il = 0; il < GH->levels; il++) { sync_cache_pre[il].invalidate(); sync_cache_cor[il].invalidate(); sync_cache_rp_coarse[il].invalidate(); sync_cache_rp_fine[il].invalidate(); }
|
||||||
|
|
||||||
// a_stream.clear();
|
// a_stream.clear();
|
||||||
// a_stream.str("");
|
// a_stream.str("");
|
||||||
@@ -2772,6 +2809,7 @@ void bssn_class::ParallelStep()
|
|||||||
GH->Regrid_Onelevel(lev - 1, Symmetry, BH_num, Porgbr, Porg0,
|
GH->Regrid_Onelevel(lev - 1, Symmetry, BH_num, Porgbr, Porg0,
|
||||||
SynchList_cor, OldStateList, StateList, SynchList_pre,
|
SynchList_cor, OldStateList, StateList, SynchList_pre,
|
||||||
fgt(PhysTime - dT_lev, StartTime, dT_levm1 / 2), ErrorMonitor);
|
fgt(PhysTime - dT_lev, StartTime, dT_levm1 / 2), ErrorMonitor);
|
||||||
|
for (int il = 0; il < GH->levels; il++) { sync_cache_pre[il].invalidate(); sync_cache_cor[il].invalidate(); sync_cache_rp_coarse[il].invalidate(); sync_cache_rp_fine[il].invalidate(); }
|
||||||
|
|
||||||
// a_stream.clear();
|
// a_stream.clear();
|
||||||
// a_stream.str("");
|
// a_stream.str("");
|
||||||
@@ -2787,6 +2825,7 @@ void bssn_class::ParallelStep()
|
|||||||
GH->Regrid_Onelevel(lev - 1, Symmetry, BH_num, Porgbr, Porg0,
|
GH->Regrid_Onelevel(lev - 1, Symmetry, BH_num, Porgbr, Porg0,
|
||||||
SynchList_cor, OldStateList, StateList, SynchList_pre,
|
SynchList_cor, OldStateList, StateList, SynchList_pre,
|
||||||
fgt(PhysTime - dT_lev, StartTime, dT_levm1 / 2), ErrorMonitor);
|
fgt(PhysTime - dT_lev, StartTime, dT_levm1 / 2), ErrorMonitor);
|
||||||
|
for (int il = 0; il < GH->levels; il++) { sync_cache_pre[il].invalidate(); sync_cache_cor[il].invalidate(); sync_cache_rp_coarse[il].invalidate(); sync_cache_rp_fine[il].invalidate(); }
|
||||||
|
|
||||||
// a_stream.clear();
|
// a_stream.clear();
|
||||||
// a_stream.str("");
|
// a_stream.str("");
|
||||||
@@ -3158,21 +3197,7 @@ void bssn_class::Step(int lev, int YN)
|
|||||||
}
|
}
|
||||||
Pp = Pp->next;
|
Pp = Pp->next;
|
||||||
}
|
}
|
||||||
// check error information
|
// NOTE: error check deferred to after Shell Patch computation to reduce MPI_Allreduce calls
|
||||||
{
|
|
||||||
int erh = ERROR;
|
|
||||||
MPI_Allreduce(&erh, &ERROR, 1, MPI_INT, MPI_SUM, MPI_COMM_WORLD);
|
|
||||||
}
|
|
||||||
if (ERROR)
|
|
||||||
{
|
|
||||||
Parallel::Dump_Data(GH->PatL[lev], StateList, 0, PhysTime, dT_lev);
|
|
||||||
if (myrank == 0)
|
|
||||||
{
|
|
||||||
if (ErrorMonitor->outfile)
|
|
||||||
ErrorMonitor->outfile << "find NaN in state variables at t = " << PhysTime << ", lev = " << lev << endl;
|
|
||||||
MPI_Abort(MPI_COMM_WORLD, 1);
|
|
||||||
}
|
|
||||||
}
|
|
||||||
|
|
||||||
#ifdef WithShell
|
#ifdef WithShell
|
||||||
// evolve Shell Patches
|
// evolve Shell Patches
|
||||||
@@ -3316,25 +3341,16 @@ void bssn_class::Step(int lev, int YN)
|
|||||||
#endif
|
#endif
|
||||||
}
|
}
|
||||||
|
|
||||||
// check error information
|
// Non-blocking error reduction overlapped with Sync to hide Allreduce latency
|
||||||
|
MPI_Request err_req;
|
||||||
{
|
{
|
||||||
int erh = ERROR;
|
int erh = ERROR;
|
||||||
MPI_Allreduce(&erh, &ERROR, 1, MPI_INT, MPI_SUM, MPI_COMM_WORLD);
|
MPI_Iallreduce(&erh, &ERROR, 1, MPI_INT, MPI_SUM, MPI_COMM_WORLD, &err_req);
|
||||||
}
|
|
||||||
|
|
||||||
if (ERROR)
|
|
||||||
{
|
|
||||||
SH->Dump_Data(StateList, 0, PhysTime, dT_lev);
|
|
||||||
if (myrank == 0)
|
|
||||||
{
|
|
||||||
if (ErrorMonitor->outfile)
|
|
||||||
ErrorMonitor->outfile << "find NaN in state variables on Shell Patches at t = " << PhysTime << endl;
|
|
||||||
MPI_Abort(MPI_COMM_WORLD, 1);
|
|
||||||
}
|
|
||||||
}
|
}
|
||||||
#endif
|
#endif
|
||||||
|
|
||||||
Parallel::Sync(GH->PatL[lev], SynchList_pre, Symmetry);
|
Parallel::AsyncSyncState async_pre;
|
||||||
|
Parallel::Sync_start(GH->PatL[lev], SynchList_pre, Symmetry, sync_cache_pre[lev], async_pre);
|
||||||
|
|
||||||
#ifdef WithShell
|
#ifdef WithShell
|
||||||
if (lev == 0)
|
if (lev == 0)
|
||||||
@@ -3353,6 +3369,23 @@ void bssn_class::Step(int lev, int YN)
|
|||||||
}
|
}
|
||||||
}
|
}
|
||||||
#endif
|
#endif
|
||||||
|
Parallel::Sync_finish(sync_cache_pre[lev], async_pre, SynchList_pre, Symmetry);
|
||||||
|
|
||||||
|
#ifdef WithShell
|
||||||
|
// Complete non-blocking error reduction and check
|
||||||
|
MPI_Wait(&err_req, MPI_STATUS_IGNORE);
|
||||||
|
if (ERROR)
|
||||||
|
{
|
||||||
|
Parallel::Dump_Data(GH->PatL[lev], StateList, 0, PhysTime, dT_lev);
|
||||||
|
SH->Dump_Data(StateList, 0, PhysTime, dT_lev);
|
||||||
|
if (myrank == 0)
|
||||||
|
{
|
||||||
|
if (ErrorMonitor->outfile)
|
||||||
|
ErrorMonitor->outfile << "find NaN in state variables at t = " << PhysTime << ", lev = " << lev << endl;
|
||||||
|
MPI_Abort(MPI_COMM_WORLD, 1);
|
||||||
|
}
|
||||||
|
}
|
||||||
|
#endif
|
||||||
|
|
||||||
#if (MAPBH == 0)
|
#if (MAPBH == 0)
|
||||||
// for black hole position
|
// for black hole position
|
||||||
@@ -3528,24 +3561,7 @@ void bssn_class::Step(int lev, int YN)
|
|||||||
Pp = Pp->next;
|
Pp = Pp->next;
|
||||||
}
|
}
|
||||||
|
|
||||||
// check error information
|
// NOTE: error check deferred to after Shell Patch computation to reduce MPI_Allreduce calls
|
||||||
{
|
|
||||||
int erh = ERROR;
|
|
||||||
MPI_Allreduce(&erh, &ERROR, 1, MPI_INT, MPI_SUM, MPI_COMM_WORLD);
|
|
||||||
}
|
|
||||||
|
|
||||||
if (ERROR)
|
|
||||||
{
|
|
||||||
Parallel::Dump_Data(GH->PatL[lev], SynchList_pre, 0, PhysTime, dT_lev);
|
|
||||||
if (myrank == 0)
|
|
||||||
{
|
|
||||||
if (ErrorMonitor->outfile)
|
|
||||||
ErrorMonitor->outfile << "find NaN in RK4 substep#" << iter_count
|
|
||||||
<< " variables at t = " << PhysTime
|
|
||||||
<< ", lev = " << lev << endl;
|
|
||||||
MPI_Abort(MPI_COMM_WORLD, 1);
|
|
||||||
}
|
|
||||||
}
|
|
||||||
|
|
||||||
#ifdef WithShell
|
#ifdef WithShell
|
||||||
// evolve Shell Patches
|
// evolve Shell Patches
|
||||||
@@ -3685,26 +3701,16 @@ void bssn_class::Step(int lev, int YN)
|
|||||||
sPp = sPp->next;
|
sPp = sPp->next;
|
||||||
}
|
}
|
||||||
}
|
}
|
||||||
// check error information
|
// Non-blocking error reduction overlapped with Sync to hide Allreduce latency
|
||||||
|
MPI_Request err_req_cor;
|
||||||
{
|
{
|
||||||
int erh = ERROR;
|
int erh = ERROR;
|
||||||
MPI_Allreduce(&erh, &ERROR, 1, MPI_INT, MPI_SUM, MPI_COMM_WORLD);
|
MPI_Iallreduce(&erh, &ERROR, 1, MPI_INT, MPI_SUM, MPI_COMM_WORLD, &err_req_cor);
|
||||||
}
|
|
||||||
if (ERROR)
|
|
||||||
{
|
|
||||||
SH->Dump_Data(SynchList_pre, 0, PhysTime, dT_lev);
|
|
||||||
if (myrank == 0)
|
|
||||||
{
|
|
||||||
if (ErrorMonitor->outfile)
|
|
||||||
ErrorMonitor->outfile << "find NaN on Shell Patches in RK4 substep#"
|
|
||||||
<< iter_count << " variables at t = "
|
|
||||||
<< PhysTime << endl;
|
|
||||||
MPI_Abort(MPI_COMM_WORLD, 1);
|
|
||||||
}
|
|
||||||
}
|
}
|
||||||
#endif
|
#endif
|
||||||
|
|
||||||
Parallel::Sync(GH->PatL[lev], SynchList_cor, Symmetry);
|
Parallel::AsyncSyncState async_cor;
|
||||||
|
Parallel::Sync_start(GH->PatL[lev], SynchList_cor, Symmetry, sync_cache_cor[lev], async_cor);
|
||||||
|
|
||||||
#ifdef WithShell
|
#ifdef WithShell
|
||||||
if (lev == 0)
|
if (lev == 0)
|
||||||
@@ -3723,6 +3729,25 @@ void bssn_class::Step(int lev, int YN)
|
|||||||
}
|
}
|
||||||
}
|
}
|
||||||
#endif
|
#endif
|
||||||
|
Parallel::Sync_finish(sync_cache_cor[lev], async_cor, SynchList_cor, Symmetry);
|
||||||
|
|
||||||
|
#ifdef WithShell
|
||||||
|
// Complete non-blocking error reduction and check
|
||||||
|
MPI_Wait(&err_req_cor, MPI_STATUS_IGNORE);
|
||||||
|
if (ERROR)
|
||||||
|
{
|
||||||
|
Parallel::Dump_Data(GH->PatL[lev], SynchList_pre, 0, PhysTime, dT_lev);
|
||||||
|
SH->Dump_Data(SynchList_pre, 0, PhysTime, dT_lev);
|
||||||
|
if (myrank == 0)
|
||||||
|
{
|
||||||
|
if (ErrorMonitor->outfile)
|
||||||
|
ErrorMonitor->outfile << "find NaN in RK4 substep#" << iter_count
|
||||||
|
<< " variables at t = " << PhysTime
|
||||||
|
<< ", lev = " << lev << endl;
|
||||||
|
MPI_Abort(MPI_COMM_WORLD, 1);
|
||||||
|
}
|
||||||
|
}
|
||||||
|
#endif
|
||||||
|
|
||||||
#if (MAPBH == 0)
|
#if (MAPBH == 0)
|
||||||
// for black hole position
|
// for black hole position
|
||||||
@@ -4034,22 +4059,7 @@ void bssn_class::Step(int lev, int YN)
|
|||||||
}
|
}
|
||||||
Pp = Pp->next;
|
Pp = Pp->next;
|
||||||
}
|
}
|
||||||
// check error information
|
// NOTE: error check deferred to after Shell Patch computation to reduce MPI_Allreduce calls
|
||||||
{
|
|
||||||
int erh = ERROR;
|
|
||||||
MPI_Allreduce(&erh, &ERROR, 1, MPI_INT, MPI_SUM, MPI_COMM_WORLD);
|
|
||||||
}
|
|
||||||
if (ERROR)
|
|
||||||
{
|
|
||||||
Parallel::Dump_Data(GH->PatL[lev], StateList, 0, PhysTime, dT_lev);
|
|
||||||
if (myrank == 0)
|
|
||||||
{
|
|
||||||
if (ErrorMonitor->outfile)
|
|
||||||
ErrorMonitor->outfile << "find NaN in state variables at t = " << PhysTime
|
|
||||||
<< ", lev = " << lev << endl;
|
|
||||||
MPI_Abort(MPI_COMM_WORLD, 1);
|
|
||||||
}
|
|
||||||
}
|
|
||||||
|
|
||||||
#ifdef WithShell
|
#ifdef WithShell
|
||||||
// evolve Shell Patches
|
// evolve Shell Patches
|
||||||
@@ -4190,25 +4200,16 @@ void bssn_class::Step(int lev, int YN)
|
|||||||
}
|
}
|
||||||
#endif
|
#endif
|
||||||
}
|
}
|
||||||
// check error information
|
// Non-blocking error reduction overlapped with Sync to hide Allreduce latency
|
||||||
|
MPI_Request err_req;
|
||||||
{
|
{
|
||||||
int erh = ERROR;
|
int erh = ERROR;
|
||||||
MPI_Allreduce(&erh, &ERROR, 1, MPI_INT, MPI_SUM, MPI_COMM_WORLD);
|
MPI_Iallreduce(&erh, &ERROR, 1, MPI_INT, MPI_SUM, MPI_COMM_WORLD, &err_req);
|
||||||
}
|
|
||||||
if (ERROR)
|
|
||||||
{
|
|
||||||
SH->Dump_Data(StateList, 0, PhysTime, dT_lev);
|
|
||||||
if (myrank == 0)
|
|
||||||
{
|
|
||||||
if (ErrorMonitor->outfile)
|
|
||||||
ErrorMonitor->outfile << "find NaN in state variables on Shell Patches at t = "
|
|
||||||
<< PhysTime << endl;
|
|
||||||
MPI_Abort(MPI_COMM_WORLD, 1);
|
|
||||||
}
|
|
||||||
}
|
}
|
||||||
#endif
|
#endif
|
||||||
|
|
||||||
Parallel::Sync(GH->PatL[lev], SynchList_pre, Symmetry);
|
Parallel::AsyncSyncState async_pre;
|
||||||
|
Parallel::Sync_start(GH->PatL[lev], SynchList_pre, Symmetry, sync_cache_pre[lev], async_pre);
|
||||||
|
|
||||||
#ifdef WithShell
|
#ifdef WithShell
|
||||||
if (lev == 0)
|
if (lev == 0)
|
||||||
@@ -4222,8 +4223,26 @@ void bssn_class::Step(int lev, int YN)
|
|||||||
prev_clock = curr_clock;
|
prev_clock = curr_clock;
|
||||||
curr_clock = clock();
|
curr_clock = clock();
|
||||||
cout << " Shell stuff synchronization used "
|
cout << " Shell stuff synchronization used "
|
||||||
<< (double)(curr_clock - prev_clock) / ((double)CLOCKS_PER_SEC)
|
<< (double)(curr_clock - prev_clock) / ((double)CLOCKS_PER_SEC)
|
||||||
<< " seconds! " << endl;
|
<< " seconds! " << endl;
|
||||||
|
}
|
||||||
|
}
|
||||||
|
#endif
|
||||||
|
Parallel::Sync_finish(sync_cache_pre[lev], async_pre, SynchList_pre, Symmetry);
|
||||||
|
|
||||||
|
#ifdef WithShell
|
||||||
|
// Complete non-blocking error reduction and check
|
||||||
|
MPI_Wait(&err_req, MPI_STATUS_IGNORE);
|
||||||
|
if (ERROR)
|
||||||
|
{
|
||||||
|
Parallel::Dump_Data(GH->PatL[lev], StateList, 0, PhysTime, dT_lev);
|
||||||
|
SH->Dump_Data(StateList, 0, PhysTime, dT_lev);
|
||||||
|
if (myrank == 0)
|
||||||
|
{
|
||||||
|
if (ErrorMonitor->outfile)
|
||||||
|
ErrorMonitor->outfile << "find NaN in state variables at t = " << PhysTime
|
||||||
|
<< ", lev = " << lev << endl;
|
||||||
|
MPI_Abort(MPI_COMM_WORLD, 1);
|
||||||
}
|
}
|
||||||
}
|
}
|
||||||
#endif
|
#endif
|
||||||
@@ -4386,23 +4405,7 @@ void bssn_class::Step(int lev, int YN)
|
|||||||
Pp = Pp->next;
|
Pp = Pp->next;
|
||||||
}
|
}
|
||||||
|
|
||||||
// check error information
|
// NOTE: error check deferred to after Shell Patch computation to reduce MPI_Allreduce calls
|
||||||
{
|
|
||||||
int erh = ERROR;
|
|
||||||
MPI_Allreduce(&erh, &ERROR, 1, MPI_INT, MPI_SUM, MPI_COMM_WORLD);
|
|
||||||
}
|
|
||||||
if (ERROR)
|
|
||||||
{
|
|
||||||
Parallel::Dump_Data(GH->PatL[lev], SynchList_pre, 0, PhysTime, dT_lev);
|
|
||||||
if (myrank == 0)
|
|
||||||
{
|
|
||||||
if (ErrorMonitor->outfile)
|
|
||||||
ErrorMonitor->outfile << "find NaN in RK4 substep#" << iter_count
|
|
||||||
<< " variables at t = " << PhysTime
|
|
||||||
<< ", lev = " << lev << endl;
|
|
||||||
MPI_Abort(MPI_COMM_WORLD, 1);
|
|
||||||
}
|
|
||||||
}
|
|
||||||
|
|
||||||
#ifdef WithShell
|
#ifdef WithShell
|
||||||
// evolve Shell Patches
|
// evolve Shell Patches
|
||||||
@@ -4542,25 +4545,16 @@ void bssn_class::Step(int lev, int YN)
|
|||||||
sPp = sPp->next;
|
sPp = sPp->next;
|
||||||
}
|
}
|
||||||
}
|
}
|
||||||
// check error information
|
// Non-blocking error reduction overlapped with Sync to hide Allreduce latency
|
||||||
|
MPI_Request err_req_cor;
|
||||||
{
|
{
|
||||||
int erh = ERROR;
|
int erh = ERROR;
|
||||||
MPI_Allreduce(&erh, &ERROR, 1, MPI_INT, MPI_SUM, MPI_COMM_WORLD);
|
MPI_Iallreduce(&erh, &ERROR, 1, MPI_INT, MPI_SUM, MPI_COMM_WORLD, &err_req_cor);
|
||||||
}
|
|
||||||
if (ERROR)
|
|
||||||
{
|
|
||||||
SH->Dump_Data(SynchList_pre, 0, PhysTime, dT_lev);
|
|
||||||
if (myrank == 0)
|
|
||||||
{
|
|
||||||
if (ErrorMonitor->outfile)
|
|
||||||
ErrorMonitor->outfile << "find NaN on Shell Patches in RK4 substep#" << iter_count
|
|
||||||
<< " variables at t = " << PhysTime << endl;
|
|
||||||
MPI_Abort(MPI_COMM_WORLD, 1);
|
|
||||||
}
|
|
||||||
}
|
}
|
||||||
#endif
|
#endif
|
||||||
|
|
||||||
Parallel::Sync(GH->PatL[lev], SynchList_cor, Symmetry);
|
Parallel::AsyncSyncState async_cor;
|
||||||
|
Parallel::Sync_start(GH->PatL[lev], SynchList_cor, Symmetry, sync_cache_cor[lev], async_cor);
|
||||||
|
|
||||||
#ifdef WithShell
|
#ifdef WithShell
|
||||||
if (lev == 0)
|
if (lev == 0)
|
||||||
@@ -4578,6 +4572,25 @@ void bssn_class::Step(int lev, int YN)
|
|||||||
<< " seconds! " << endl;
|
<< " seconds! " << endl;
|
||||||
}
|
}
|
||||||
}
|
}
|
||||||
|
#endif
|
||||||
|
Parallel::Sync_finish(sync_cache_cor[lev], async_cor, SynchList_cor, Symmetry);
|
||||||
|
|
||||||
|
#ifdef WithShell
|
||||||
|
// Complete non-blocking error reduction and check
|
||||||
|
MPI_Wait(&err_req_cor, MPI_STATUS_IGNORE);
|
||||||
|
if (ERROR)
|
||||||
|
{
|
||||||
|
Parallel::Dump_Data(GH->PatL[lev], SynchList_pre, 0, PhysTime, dT_lev);
|
||||||
|
SH->Dump_Data(SynchList_pre, 0, PhysTime, dT_lev);
|
||||||
|
if (myrank == 0)
|
||||||
|
{
|
||||||
|
if (ErrorMonitor->outfile)
|
||||||
|
ErrorMonitor->outfile << "find NaN in RK4 substep#" << iter_count
|
||||||
|
<< " variables at t = " << PhysTime
|
||||||
|
<< ", lev = " << lev << endl;
|
||||||
|
MPI_Abort(MPI_COMM_WORLD, 1);
|
||||||
|
}
|
||||||
|
}
|
||||||
#endif
|
#endif
|
||||||
// for black hole position
|
// for black hole position
|
||||||
if (BH_num > 0 && lev == GH->levels - 1)
|
if (BH_num > 0 && lev == GH->levels - 1)
|
||||||
@@ -4943,11 +4956,19 @@ void bssn_class::Step(int lev, int YN)
|
|||||||
|
|
||||||
// misc::tillherecheck(GH->Commlev[lev],GH->start_rank[lev],"after Predictor rhs calculation");
|
// misc::tillherecheck(GH->Commlev[lev],GH->start_rank[lev],"after Predictor rhs calculation");
|
||||||
|
|
||||||
// check error information
|
// Non-blocking error reduction overlapped with Sync to hide Allreduce latency
|
||||||
|
MPI_Request err_req;
|
||||||
{
|
{
|
||||||
int erh = ERROR;
|
int erh = ERROR;
|
||||||
MPI_Allreduce(&erh, &ERROR, 1, MPI_INT, MPI_SUM, GH->Commlev[lev]);
|
MPI_Iallreduce(&erh, &ERROR, 1, MPI_INT, MPI_SUM, GH->Commlev[lev], &err_req);
|
||||||
}
|
}
|
||||||
|
|
||||||
|
// misc::tillherecheck(GH->Commlev[lev],GH->start_rank[lev],"before Predictor sync");
|
||||||
|
|
||||||
|
Parallel::Sync_cached(GH->PatL[lev], SynchList_pre, Symmetry, sync_cache_pre[lev]);
|
||||||
|
|
||||||
|
// Complete non-blocking error reduction and check
|
||||||
|
MPI_Wait(&err_req, MPI_STATUS_IGNORE);
|
||||||
if (ERROR)
|
if (ERROR)
|
||||||
{
|
{
|
||||||
Parallel::Dump_Data(GH->PatL[lev], StateList, 0, PhysTime, dT_lev);
|
Parallel::Dump_Data(GH->PatL[lev], StateList, 0, PhysTime, dT_lev);
|
||||||
@@ -4959,10 +4980,6 @@ void bssn_class::Step(int lev, int YN)
|
|||||||
}
|
}
|
||||||
}
|
}
|
||||||
|
|
||||||
// misc::tillherecheck(GH->Commlev[lev],GH->start_rank[lev],"before Predictor sync");
|
|
||||||
|
|
||||||
Parallel::Sync(GH->PatL[lev], SynchList_pre, Symmetry);
|
|
||||||
|
|
||||||
#if (MAPBH == 0)
|
#if (MAPBH == 0)
|
||||||
// for black hole position
|
// for black hole position
|
||||||
if (BH_num > 0 && lev == GH->levels - 1)
|
if (BH_num > 0 && lev == GH->levels - 1)
|
||||||
@@ -5140,11 +5157,21 @@ void bssn_class::Step(int lev, int YN)
|
|||||||
|
|
||||||
// misc::tillherecheck(GH->Commlev[lev],GH->start_rank[lev],"before Corrector error check");
|
// misc::tillherecheck(GH->Commlev[lev],GH->start_rank[lev],"before Corrector error check");
|
||||||
|
|
||||||
// check error information
|
// Non-blocking error reduction overlapped with Sync to hide Allreduce latency
|
||||||
|
MPI_Request err_req_cor;
|
||||||
{
|
{
|
||||||
int erh = ERROR;
|
int erh = ERROR;
|
||||||
MPI_Allreduce(&erh, &ERROR, 1, MPI_INT, MPI_SUM, GH->Commlev[lev]);
|
MPI_Iallreduce(&erh, &ERROR, 1, MPI_INT, MPI_SUM, GH->Commlev[lev], &err_req_cor);
|
||||||
}
|
}
|
||||||
|
|
||||||
|
// misc::tillherecheck(GH->Commlev[lev],GH->start_rank[lev],"before Corrector sync");
|
||||||
|
|
||||||
|
Parallel::Sync_cached(GH->PatL[lev], SynchList_cor, Symmetry, sync_cache_cor[lev]);
|
||||||
|
|
||||||
|
// misc::tillherecheck(GH->Commlev[lev],GH->start_rank[lev],"after Corrector sync");
|
||||||
|
|
||||||
|
// Complete non-blocking error reduction and check
|
||||||
|
MPI_Wait(&err_req_cor, MPI_STATUS_IGNORE);
|
||||||
if (ERROR)
|
if (ERROR)
|
||||||
{
|
{
|
||||||
Parallel::Dump_Data(GH->PatL[lev], SynchList_pre, 0, PhysTime, dT_lev);
|
Parallel::Dump_Data(GH->PatL[lev], SynchList_pre, 0, PhysTime, dT_lev);
|
||||||
@@ -5158,12 +5185,6 @@ void bssn_class::Step(int lev, int YN)
|
|||||||
}
|
}
|
||||||
}
|
}
|
||||||
|
|
||||||
// misc::tillherecheck(GH->Commlev[lev],GH->start_rank[lev],"before Corrector sync");
|
|
||||||
|
|
||||||
Parallel::Sync(GH->PatL[lev], SynchList_cor, Symmetry);
|
|
||||||
|
|
||||||
// misc::tillherecheck(GH->Commlev[lev],GH->start_rank[lev],"after Corrector sync");
|
|
||||||
|
|
||||||
#if (MAPBH == 0)
|
#if (MAPBH == 0)
|
||||||
// for black hole position
|
// for black hole position
|
||||||
if (BH_num > 0 && lev == GH->levels - 1)
|
if (BH_num > 0 && lev == GH->levels - 1)
|
||||||
@@ -5447,21 +5468,11 @@ void bssn_class::SHStep()
|
|||||||
#if (PSTR == 1 || PSTR == 2)
|
#if (PSTR == 1 || PSTR == 2)
|
||||||
// misc::tillherecheck(GH->Commlev[lev],GH->start_rank[lev],"before Predictor's error check");
|
// misc::tillherecheck(GH->Commlev[lev],GH->start_rank[lev],"before Predictor's error check");
|
||||||
#endif
|
#endif
|
||||||
// check error information
|
// Non-blocking error reduction overlapped with Synch to hide Allreduce latency
|
||||||
|
MPI_Request err_req;
|
||||||
{
|
{
|
||||||
int erh = ERROR;
|
int erh = ERROR;
|
||||||
MPI_Allreduce(&erh, &ERROR, 1, MPI_INT, MPI_SUM, MPI_COMM_WORLD);
|
MPI_Iallreduce(&erh, &ERROR, 1, MPI_INT, MPI_SUM, MPI_COMM_WORLD, &err_req);
|
||||||
}
|
|
||||||
|
|
||||||
if (ERROR)
|
|
||||||
{
|
|
||||||
SH->Dump_Data(StateList, 0, PhysTime, dT_lev);
|
|
||||||
if (myrank == 0)
|
|
||||||
{
|
|
||||||
if (ErrorMonitor->outfile)
|
|
||||||
ErrorMonitor->outfile << "find NaN in state variables on Shell Patches at t = " << PhysTime << endl;
|
|
||||||
MPI_Abort(MPI_COMM_WORLD, 1);
|
|
||||||
}
|
|
||||||
}
|
}
|
||||||
|
|
||||||
{
|
{
|
||||||
@@ -5479,6 +5490,19 @@ void bssn_class::SHStep()
|
|||||||
}
|
}
|
||||||
}
|
}
|
||||||
|
|
||||||
|
// Complete non-blocking error reduction and check
|
||||||
|
MPI_Wait(&err_req, MPI_STATUS_IGNORE);
|
||||||
|
if (ERROR)
|
||||||
|
{
|
||||||
|
SH->Dump_Data(StateList, 0, PhysTime, dT_lev);
|
||||||
|
if (myrank == 0)
|
||||||
|
{
|
||||||
|
if (ErrorMonitor->outfile)
|
||||||
|
ErrorMonitor->outfile << "find NaN in state variables on Shell Patches at t = " << PhysTime << endl;
|
||||||
|
MPI_Abort(MPI_COMM_WORLD, 1);
|
||||||
|
}
|
||||||
|
}
|
||||||
|
|
||||||
// corrector
|
// corrector
|
||||||
for (iter_count = 1; iter_count < 4; iter_count++)
|
for (iter_count = 1; iter_count < 4; iter_count++)
|
||||||
{
|
{
|
||||||
@@ -5621,21 +5645,11 @@ void bssn_class::SHStep()
|
|||||||
sPp = sPp->next;
|
sPp = sPp->next;
|
||||||
}
|
}
|
||||||
}
|
}
|
||||||
// check error information
|
// Non-blocking error reduction overlapped with Synch to hide Allreduce latency
|
||||||
|
MPI_Request err_req_cor;
|
||||||
{
|
{
|
||||||
int erh = ERROR;
|
int erh = ERROR;
|
||||||
MPI_Allreduce(&erh, &ERROR, 1, MPI_INT, MPI_SUM, MPI_COMM_WORLD);
|
MPI_Iallreduce(&erh, &ERROR, 1, MPI_INT, MPI_SUM, MPI_COMM_WORLD, &err_req_cor);
|
||||||
}
|
|
||||||
if (ERROR)
|
|
||||||
{
|
|
||||||
SH->Dump_Data(SynchList_pre, 0, PhysTime, dT_lev);
|
|
||||||
if (myrank == 0)
|
|
||||||
{
|
|
||||||
if (ErrorMonitor->outfile)
|
|
||||||
ErrorMonitor->outfile << "find NaN on Shell Patches in RK4 substep#" << iter_count
|
|
||||||
<< " variables at t = " << PhysTime << endl;
|
|
||||||
MPI_Abort(MPI_COMM_WORLD, 1);
|
|
||||||
}
|
|
||||||
}
|
}
|
||||||
|
|
||||||
{
|
{
|
||||||
@@ -5653,6 +5667,20 @@ void bssn_class::SHStep()
|
|||||||
}
|
}
|
||||||
}
|
}
|
||||||
|
|
||||||
|
// Complete non-blocking error reduction and check
|
||||||
|
MPI_Wait(&err_req_cor, MPI_STATUS_IGNORE);
|
||||||
|
if (ERROR)
|
||||||
|
{
|
||||||
|
SH->Dump_Data(SynchList_pre, 0, PhysTime, dT_lev);
|
||||||
|
if (myrank == 0)
|
||||||
|
{
|
||||||
|
if (ErrorMonitor->outfile)
|
||||||
|
ErrorMonitor->outfile << "find NaN on Shell Patches in RK4 substep#" << iter_count
|
||||||
|
<< " variables at t = " << PhysTime << endl;
|
||||||
|
MPI_Abort(MPI_COMM_WORLD, 1);
|
||||||
|
}
|
||||||
|
}
|
||||||
|
|
||||||
sPp = SH->PatL;
|
sPp = SH->PatL;
|
||||||
while (sPp)
|
while (sPp)
|
||||||
{
|
{
|
||||||
@@ -5781,7 +5809,7 @@ void bssn_class::RestrictProlong(int lev, int YN, bool BB,
|
|||||||
// misc::tillherecheck(GH->Commlev[GH->mylev],GH->start_rank[GH->mylev],a_stream.str());
|
// misc::tillherecheck(GH->Commlev[GH->mylev],GH->start_rank[GH->mylev],a_stream.str());
|
||||||
#endif
|
#endif
|
||||||
|
|
||||||
Parallel::Sync(GH->PatL[lev - 1], SynchList_pre, Symmetry);
|
Parallel::Sync_cached(GH->PatL[lev - 1], SynchList_pre, Symmetry, sync_cache_rp_coarse[lev]);
|
||||||
|
|
||||||
#if (PSTR == 1 || PSTR == 2)
|
#if (PSTR == 1 || PSTR == 2)
|
||||||
// a_stream.clear();
|
// a_stream.clear();
|
||||||
@@ -5791,21 +5819,11 @@ void bssn_class::RestrictProlong(int lev, int YN, bool BB,
|
|||||||
#endif
|
#endif
|
||||||
|
|
||||||
#if (RPB == 0)
|
#if (RPB == 0)
|
||||||
Ppc = GH->PatL[lev - 1];
|
|
||||||
while (Ppc)
|
|
||||||
{
|
|
||||||
Pp = GH->PatL[lev];
|
|
||||||
while (Pp)
|
|
||||||
{
|
|
||||||
#if (MIXOUTB == 0)
|
#if (MIXOUTB == 0)
|
||||||
Parallel::OutBdLow2Hi(Ppc->data, Pp->data, SynchList_pre, SL, Symmetry);
|
Parallel::OutBdLow2Hi(GH->PatL[lev - 1], GH->PatL[lev], SynchList_pre, SL, Symmetry);
|
||||||
#elif (MIXOUTB == 1)
|
#elif (MIXOUTB == 1)
|
||||||
Parallel::OutBdLow2Himix(Ppc->data, Pp->data, SynchList_pre, SL, Symmetry);
|
Parallel::OutBdLow2Himix(GH->PatL[lev - 1], GH->PatL[lev], SynchList_pre, SL, Symmetry);
|
||||||
#endif
|
#endif
|
||||||
Pp = Pp->next;
|
|
||||||
}
|
|
||||||
Ppc = Ppc->next;
|
|
||||||
}
|
|
||||||
#elif (RPB == 1)
|
#elif (RPB == 1)
|
||||||
// Parallel::OutBdLow2Hi_bam(GH->PatL[lev-1],GH->PatL[lev],SynchList_pre,SL,Symmetry);
|
// Parallel::OutBdLow2Hi_bam(GH->PatL[lev-1],GH->PatL[lev],SynchList_pre,SL,Symmetry);
|
||||||
Parallel::OutBdLow2Hi_bam(GH->PatL[lev - 1], GH->PatL[lev], SynchList_pre, SL, GH->bdsul[lev], Symmetry);
|
Parallel::OutBdLow2Hi_bam(GH->PatL[lev - 1], GH->PatL[lev], SynchList_pre, SL, GH->bdsul[lev], Symmetry);
|
||||||
@@ -5842,7 +5860,7 @@ void bssn_class::RestrictProlong(int lev, int YN, bool BB,
|
|||||||
// misc::tillherecheck(GH->Commlev[GH->mylev],GH->start_rank[GH->mylev],a_stream.str());
|
// misc::tillherecheck(GH->Commlev[GH->mylev],GH->start_rank[GH->mylev],a_stream.str());
|
||||||
#endif
|
#endif
|
||||||
|
|
||||||
Parallel::Sync(GH->PatL[lev - 1], SL, Symmetry);
|
Parallel::Sync_cached(GH->PatL[lev - 1], SL, Symmetry, sync_cache_rp_coarse[lev]);
|
||||||
|
|
||||||
#if (PSTR == 1 || PSTR == 2)
|
#if (PSTR == 1 || PSTR == 2)
|
||||||
// a_stream.clear();
|
// a_stream.clear();
|
||||||
@@ -5852,21 +5870,11 @@ void bssn_class::RestrictProlong(int lev, int YN, bool BB,
|
|||||||
#endif
|
#endif
|
||||||
|
|
||||||
#if (RPB == 0)
|
#if (RPB == 0)
|
||||||
Ppc = GH->PatL[lev - 1];
|
|
||||||
while (Ppc)
|
|
||||||
{
|
|
||||||
Pp = GH->PatL[lev];
|
|
||||||
while (Pp)
|
|
||||||
{
|
|
||||||
#if (MIXOUTB == 0)
|
#if (MIXOUTB == 0)
|
||||||
Parallel::OutBdLow2Hi(Ppc->data, Pp->data, SL, SL, Symmetry);
|
Parallel::OutBdLow2Hi(GH->PatL[lev - 1], GH->PatL[lev], SL, SL, Symmetry);
|
||||||
#elif (MIXOUTB == 1)
|
#elif (MIXOUTB == 1)
|
||||||
Parallel::OutBdLow2Himix(Ppc->data, Pp->data, SL, SL, Symmetry);
|
Parallel::OutBdLow2Himix(GH->PatL[lev - 1], GH->PatL[lev], SL, SL, Symmetry);
|
||||||
#endif
|
#endif
|
||||||
Pp = Pp->next;
|
|
||||||
}
|
|
||||||
Ppc = Ppc->next;
|
|
||||||
}
|
|
||||||
#elif (RPB == 1)
|
#elif (RPB == 1)
|
||||||
// Parallel::OutBdLow2Hi_bam(GH->PatL[lev-1],GH->PatL[lev],SL,SL,Symmetry);
|
// Parallel::OutBdLow2Hi_bam(GH->PatL[lev-1],GH->PatL[lev],SL,SL,Symmetry);
|
||||||
Parallel::OutBdLow2Hi_bam(GH->PatL[lev - 1], GH->PatL[lev], SL, SL, GH->bdsul[lev], Symmetry);
|
Parallel::OutBdLow2Hi_bam(GH->PatL[lev - 1], GH->PatL[lev], SL, SL, GH->bdsul[lev], Symmetry);
|
||||||
@@ -5880,7 +5888,7 @@ void bssn_class::RestrictProlong(int lev, int YN, bool BB,
|
|||||||
#endif
|
#endif
|
||||||
}
|
}
|
||||||
|
|
||||||
Parallel::Sync(GH->PatL[lev], SL, Symmetry);
|
Parallel::Sync_cached(GH->PatL[lev], SL, Symmetry, sync_cache_rp_fine[lev]);
|
||||||
|
|
||||||
#if (PSTR == 1 || PSTR == 2)
|
#if (PSTR == 1 || PSTR == 2)
|
||||||
// a_stream.clear();
|
// a_stream.clear();
|
||||||
@@ -5938,24 +5946,14 @@ void bssn_class::RestrictProlong_aux(int lev, int YN, bool BB,
|
|||||||
Parallel::Restrict_bam(GH->PatL[lev - 1], GH->PatL[lev], SL, SynchList_pre, GH->rsul[lev], Symmetry);
|
Parallel::Restrict_bam(GH->PatL[lev - 1], GH->PatL[lev], SL, SynchList_pre, GH->rsul[lev], Symmetry);
|
||||||
#endif
|
#endif
|
||||||
|
|
||||||
Parallel::Sync(GH->PatL[lev - 1], SynchList_pre, Symmetry);
|
Parallel::Sync_cached(GH->PatL[lev - 1], SynchList_pre, Symmetry, sync_cache_rp_coarse[lev]);
|
||||||
|
|
||||||
#if (RPB == 0)
|
#if (RPB == 0)
|
||||||
Ppc = GH->PatL[lev - 1];
|
|
||||||
while (Ppc)
|
|
||||||
{
|
|
||||||
Pp = GH->PatL[lev];
|
|
||||||
while (Pp)
|
|
||||||
{
|
|
||||||
#if (MIXOUTB == 0)
|
#if (MIXOUTB == 0)
|
||||||
Parallel::OutBdLow2Hi(Ppc->data, Pp->data, SynchList_pre, SL, Symmetry);
|
Parallel::OutBdLow2Hi(GH->PatL[lev - 1], GH->PatL[lev], SynchList_pre, SL, Symmetry);
|
||||||
#elif (MIXOUTB == 1)
|
#elif (MIXOUTB == 1)
|
||||||
Parallel::OutBdLow2Himix(Ppc->data, Pp->data, SynchList_pre, SL, Symmetry);
|
Parallel::OutBdLow2Himix(GH->PatL[lev - 1], GH->PatL[lev], SynchList_pre, SL, Symmetry);
|
||||||
#endif
|
#endif
|
||||||
Pp = Pp->next;
|
|
||||||
}
|
|
||||||
Ppc = Ppc->next;
|
|
||||||
}
|
|
||||||
#elif (RPB == 1)
|
#elif (RPB == 1)
|
||||||
// Parallel::OutBdLow2Hi_bam(GH->PatL[lev-1],GH->PatL[lev],SynchList_pre,SL,Symmetry);
|
// Parallel::OutBdLow2Hi_bam(GH->PatL[lev-1],GH->PatL[lev],SynchList_pre,SL,Symmetry);
|
||||||
Parallel::OutBdLow2Hi_bam(GH->PatL[lev - 1], GH->PatL[lev], SynchList_pre, SL, GH->bdsul[lev], Symmetry);
|
Parallel::OutBdLow2Hi_bam(GH->PatL[lev - 1], GH->PatL[lev], SynchList_pre, SL, GH->bdsul[lev], Symmetry);
|
||||||
@@ -5970,31 +5968,21 @@ void bssn_class::RestrictProlong_aux(int lev, int YN, bool BB,
|
|||||||
Parallel::Restrict_bam(GH->PatL[lev - 1], GH->PatL[lev], SL, SL, GH->rsul[lev], Symmetry);
|
Parallel::Restrict_bam(GH->PatL[lev - 1], GH->PatL[lev], SL, SL, GH->rsul[lev], Symmetry);
|
||||||
#endif
|
#endif
|
||||||
|
|
||||||
Parallel::Sync(GH->PatL[lev - 1], SL, Symmetry);
|
Parallel::Sync_cached(GH->PatL[lev - 1], SL, Symmetry, sync_cache_rp_coarse[lev]);
|
||||||
|
|
||||||
#if (RPB == 0)
|
#if (RPB == 0)
|
||||||
Ppc = GH->PatL[lev - 1];
|
|
||||||
while (Ppc)
|
|
||||||
{
|
|
||||||
Pp = GH->PatL[lev];
|
|
||||||
while (Pp)
|
|
||||||
{
|
|
||||||
#if (MIXOUTB == 0)
|
#if (MIXOUTB == 0)
|
||||||
Parallel::OutBdLow2Hi(Ppc->data, Pp->data, SL, SL, Symmetry);
|
Parallel::OutBdLow2Hi(GH->PatL[lev - 1], GH->PatL[lev], SL, SL, Symmetry);
|
||||||
#elif (MIXOUTB == 1)
|
#elif (MIXOUTB == 1)
|
||||||
Parallel::OutBdLow2Himix(Ppc->data, Pp->data, SL, SL, Symmetry);
|
Parallel::OutBdLow2Himix(GH->PatL[lev - 1], GH->PatL[lev], SL, SL, Symmetry);
|
||||||
#endif
|
#endif
|
||||||
Pp = Pp->next;
|
|
||||||
}
|
|
||||||
Ppc = Ppc->next;
|
|
||||||
}
|
|
||||||
#elif (RPB == 1)
|
#elif (RPB == 1)
|
||||||
// Parallel::OutBdLow2Hi_bam(GH->PatL[lev-1],GH->PatL[lev],SL,SL,Symmetry);
|
// Parallel::OutBdLow2Hi_bam(GH->PatL[lev-1],GH->PatL[lev],SL,SL,Symmetry);
|
||||||
Parallel::OutBdLow2Hi_bam(GH->PatL[lev - 1], GH->PatL[lev], SL, SL, GH->bdsul[lev], Symmetry);
|
Parallel::OutBdLow2Hi_bam(GH->PatL[lev - 1], GH->PatL[lev], SL, SL, GH->bdsul[lev], Symmetry);
|
||||||
#endif
|
#endif
|
||||||
}
|
}
|
||||||
|
|
||||||
Parallel::Sync(GH->PatL[lev], SL, Symmetry);
|
Parallel::Sync_cached(GH->PatL[lev], SL, Symmetry, sync_cache_rp_fine[lev]);
|
||||||
}
|
}
|
||||||
}
|
}
|
||||||
|
|
||||||
@@ -6045,24 +6033,14 @@ void bssn_class::RestrictProlong(int lev, int YN, bool BB)
|
|||||||
Parallel::Restrict_bam(GH->PatL[lev - 1], GH->PatL[lev], SynchList_cor, SynchList_pre, GH->rsul[lev], Symmetry);
|
Parallel::Restrict_bam(GH->PatL[lev - 1], GH->PatL[lev], SynchList_cor, SynchList_pre, GH->rsul[lev], Symmetry);
|
||||||
#endif
|
#endif
|
||||||
|
|
||||||
Parallel::Sync(GH->PatL[lev - 1], SynchList_pre, Symmetry);
|
Parallel::Sync_cached(GH->PatL[lev - 1], SynchList_pre, Symmetry, sync_cache_rp_coarse[lev]);
|
||||||
|
|
||||||
#if (RPB == 0)
|
#if (RPB == 0)
|
||||||
Ppc = GH->PatL[lev - 1];
|
|
||||||
while (Ppc)
|
|
||||||
{
|
|
||||||
Pp = GH->PatL[lev];
|
|
||||||
while (Pp)
|
|
||||||
{
|
|
||||||
#if (MIXOUTB == 0)
|
#if (MIXOUTB == 0)
|
||||||
Parallel::OutBdLow2Hi(Ppc->data, Pp->data, SynchList_pre, SynchList_cor, Symmetry);
|
Parallel::OutBdLow2Hi(GH->PatL[lev - 1], GH->PatL[lev], SynchList_pre, SynchList_cor, Symmetry);
|
||||||
#elif (MIXOUTB == 1)
|
#elif (MIXOUTB == 1)
|
||||||
Parallel::OutBdLow2Himix(Ppc->data, Pp->data, SynchList_pre, SynchList_cor, Symmetry);
|
Parallel::OutBdLow2Himix(GH->PatL[lev - 1], GH->PatL[lev], SynchList_pre, SynchList_cor, Symmetry);
|
||||||
#endif
|
#endif
|
||||||
Pp = Pp->next;
|
|
||||||
}
|
|
||||||
Ppc = Ppc->next;
|
|
||||||
}
|
|
||||||
#elif (RPB == 1)
|
#elif (RPB == 1)
|
||||||
// Parallel::OutBdLow2Hi_bam(GH->PatL[lev-1],GH->PatL[lev],SynchList_pre,SynchList_cor,Symmetry);
|
// Parallel::OutBdLow2Hi_bam(GH->PatL[lev-1],GH->PatL[lev],SynchList_pre,SynchList_cor,Symmetry);
|
||||||
Parallel::OutBdLow2Hi_bam(GH->PatL[lev - 1], GH->PatL[lev], SynchList_pre, SynchList_cor, GH->bdsul[lev], Symmetry);
|
Parallel::OutBdLow2Hi_bam(GH->PatL[lev - 1], GH->PatL[lev], SynchList_pre, SynchList_cor, GH->bdsul[lev], Symmetry);
|
||||||
@@ -6079,31 +6057,21 @@ void bssn_class::RestrictProlong(int lev, int YN, bool BB)
|
|||||||
Parallel::Restrict_bam(GH->PatL[lev - 1], GH->PatL[lev], SynchList_cor, StateList, GH->rsul[lev], Symmetry);
|
Parallel::Restrict_bam(GH->PatL[lev - 1], GH->PatL[lev], SynchList_cor, StateList, GH->rsul[lev], Symmetry);
|
||||||
#endif
|
#endif
|
||||||
|
|
||||||
Parallel::Sync(GH->PatL[lev - 1], StateList, Symmetry);
|
Parallel::Sync_cached(GH->PatL[lev - 1], StateList, Symmetry, sync_cache_rp_coarse[lev]);
|
||||||
|
|
||||||
#if (RPB == 0)
|
#if (RPB == 0)
|
||||||
Ppc = GH->PatL[lev - 1];
|
|
||||||
while (Ppc)
|
|
||||||
{
|
|
||||||
Pp = GH->PatL[lev];
|
|
||||||
while (Pp)
|
|
||||||
{
|
|
||||||
#if (MIXOUTB == 0)
|
#if (MIXOUTB == 0)
|
||||||
Parallel::OutBdLow2Hi(Ppc->data, Pp->data, StateList, SynchList_cor, Symmetry);
|
Parallel::OutBdLow2Hi(GH->PatL[lev - 1], GH->PatL[lev], StateList, SynchList_cor, Symmetry);
|
||||||
#elif (MIXOUTB == 1)
|
#elif (MIXOUTB == 1)
|
||||||
Parallel::OutBdLow2Himix(Ppc->data, Pp->data, StateList, SynchList_cor, Symmetry);
|
Parallel::OutBdLow2Himix(GH->PatL[lev - 1], GH->PatL[lev], StateList, SynchList_cor, Symmetry);
|
||||||
#endif
|
#endif
|
||||||
Pp = Pp->next;
|
|
||||||
}
|
|
||||||
Ppc = Ppc->next;
|
|
||||||
}
|
|
||||||
#elif (RPB == 1)
|
#elif (RPB == 1)
|
||||||
// Parallel::OutBdLow2Hi_bam(GH->PatL[lev-1],GH->PatL[lev],StateList,SynchList_cor,Symmetry);
|
// Parallel::OutBdLow2Hi_bam(GH->PatL[lev-1],GH->PatL[lev],StateList,SynchList_cor,Symmetry);
|
||||||
Parallel::OutBdLow2Hi_bam(GH->PatL[lev - 1], GH->PatL[lev], StateList, SynchList_cor, GH->bdsul[lev], Symmetry);
|
Parallel::OutBdLow2Hi_bam(GH->PatL[lev - 1], GH->PatL[lev], StateList, SynchList_cor, GH->bdsul[lev], Symmetry);
|
||||||
#endif
|
#endif
|
||||||
}
|
}
|
||||||
|
|
||||||
Parallel::Sync(GH->PatL[lev], SynchList_cor, Symmetry);
|
Parallel::Sync_cached(GH->PatL[lev], SynchList_cor, Symmetry, sync_cache_rp_fine[lev]);
|
||||||
}
|
}
|
||||||
}
|
}
|
||||||
|
|
||||||
@@ -6133,21 +6101,11 @@ void bssn_class::ProlongRestrict(int lev, int YN, bool BB)
|
|||||||
}
|
}
|
||||||
|
|
||||||
#if (RPB == 0)
|
#if (RPB == 0)
|
||||||
Ppc = GH->PatL[lev - 1];
|
|
||||||
while (Ppc)
|
|
||||||
{
|
|
||||||
Pp = GH->PatL[lev];
|
|
||||||
while (Pp)
|
|
||||||
{
|
|
||||||
#if (MIXOUTB == 0)
|
#if (MIXOUTB == 0)
|
||||||
Parallel::OutBdLow2Hi(Ppc->data, Pp->data, SynchList_pre, SynchList_cor, Symmetry);
|
Parallel::OutBdLow2Hi(GH->PatL[lev - 1], GH->PatL[lev], SynchList_pre, SynchList_cor, Symmetry);
|
||||||
#elif (MIXOUTB == 1)
|
#elif (MIXOUTB == 1)
|
||||||
Parallel::OutBdLow2Himix(Ppc->data, Pp->data, SynchList_pre, SynchList_cor, Symmetry);
|
Parallel::OutBdLow2Himix(GH->PatL[lev - 1], GH->PatL[lev], SynchList_pre, SynchList_cor, Symmetry);
|
||||||
#endif
|
#endif
|
||||||
Pp = Pp->next;
|
|
||||||
}
|
|
||||||
Ppc = Ppc->next;
|
|
||||||
}
|
|
||||||
#elif (RPB == 1)
|
#elif (RPB == 1)
|
||||||
// Parallel::OutBdLow2Hi_bam(GH->PatL[lev-1],GH->PatL[lev],SynchList_pre,SynchList_cor,Symmetry);
|
// Parallel::OutBdLow2Hi_bam(GH->PatL[lev-1],GH->PatL[lev],SynchList_pre,SynchList_cor,Symmetry);
|
||||||
Parallel::OutBdLow2Hi_bam(GH->PatL[lev - 1], GH->PatL[lev], SynchList_pre, SynchList_cor, GH->bdsul[lev], Symmetry);
|
Parallel::OutBdLow2Hi_bam(GH->PatL[lev - 1], GH->PatL[lev], SynchList_pre, SynchList_cor, GH->bdsul[lev], Symmetry);
|
||||||
@@ -6156,21 +6114,11 @@ void bssn_class::ProlongRestrict(int lev, int YN, bool BB)
|
|||||||
else // no time refinement levels and for all same time levels
|
else // no time refinement levels and for all same time levels
|
||||||
{
|
{
|
||||||
#if (RPB == 0)
|
#if (RPB == 0)
|
||||||
Ppc = GH->PatL[lev - 1];
|
|
||||||
while (Ppc)
|
|
||||||
{
|
|
||||||
Pp = GH->PatL[lev];
|
|
||||||
while (Pp)
|
|
||||||
{
|
|
||||||
#if (MIXOUTB == 0)
|
#if (MIXOUTB == 0)
|
||||||
Parallel::OutBdLow2Hi(Ppc->data, Pp->data, StateList, SynchList_cor, Symmetry);
|
Parallel::OutBdLow2Hi(GH->PatL[lev - 1], GH->PatL[lev], StateList, SynchList_cor, Symmetry);
|
||||||
#elif (MIXOUTB == 1)
|
#elif (MIXOUTB == 1)
|
||||||
Parallel::OutBdLow2Himix(Ppc->data, Pp->data, StateList, SynchList_cor, Symmetry);
|
Parallel::OutBdLow2Himix(GH->PatL[lev - 1], GH->PatL[lev], StateList, SynchList_cor, Symmetry);
|
||||||
#endif
|
#endif
|
||||||
Pp = Pp->next;
|
|
||||||
}
|
|
||||||
Ppc = Ppc->next;
|
|
||||||
}
|
|
||||||
#elif (RPB == 1)
|
#elif (RPB == 1)
|
||||||
// Parallel::OutBdLow2Hi_bam(GH->PatL[lev-1],GH->PatL[lev],StateList,SynchList_cor,Symmetry);
|
// Parallel::OutBdLow2Hi_bam(GH->PatL[lev-1],GH->PatL[lev],StateList,SynchList_cor,Symmetry);
|
||||||
Parallel::OutBdLow2Hi_bam(GH->PatL[lev - 1], GH->PatL[lev], StateList, SynchList_cor, GH->bdsul[lev], Symmetry);
|
Parallel::OutBdLow2Hi_bam(GH->PatL[lev - 1], GH->PatL[lev], StateList, SynchList_cor, GH->bdsul[lev], Symmetry);
|
||||||
@@ -6186,10 +6134,10 @@ void bssn_class::ProlongRestrict(int lev, int YN, bool BB)
|
|||||||
#else
|
#else
|
||||||
Parallel::Restrict_after(GH->PatL[lev - 1], GH->PatL[lev], SynchList_cor, StateList, Symmetry);
|
Parallel::Restrict_after(GH->PatL[lev - 1], GH->PatL[lev], SynchList_cor, StateList, Symmetry);
|
||||||
#endif
|
#endif
|
||||||
Parallel::Sync(GH->PatL[lev - 1], StateList, Symmetry);
|
Parallel::Sync_cached(GH->PatL[lev - 1], StateList, Symmetry, sync_cache_rp_coarse[lev]);
|
||||||
}
|
}
|
||||||
|
|
||||||
Parallel::Sync(GH->PatL[lev], SynchList_cor, Symmetry);
|
Parallel::Sync_cached(GH->PatL[lev], SynchList_cor, Symmetry, sync_cache_rp_fine[lev]);
|
||||||
}
|
}
|
||||||
}
|
}
|
||||||
#undef MIXOUTB
|
#undef MIXOUTB
|
||||||
|
|||||||
@@ -126,6 +126,11 @@ public:
|
|||||||
MyList<var> *OldStateList, *DumpList;
|
MyList<var> *OldStateList, *DumpList;
|
||||||
MyList<var> *ConstraintList;
|
MyList<var> *ConstraintList;
|
||||||
|
|
||||||
|
Parallel::SyncCache *sync_cache_pre; // per-level cache for predictor sync
|
||||||
|
Parallel::SyncCache *sync_cache_cor; // per-level cache for corrector sync
|
||||||
|
Parallel::SyncCache *sync_cache_rp_coarse; // RestrictProlong sync on PatL[lev-1]
|
||||||
|
Parallel::SyncCache *sync_cache_rp_fine; // RestrictProlong sync on PatL[lev]
|
||||||
|
|
||||||
monitor *ErrorMonitor, *Psi4Monitor, *BHMonitor, *MAPMonitor;
|
monitor *ErrorMonitor, *Psi4Monitor, *BHMonitor, *MAPMonitor;
|
||||||
monitor *ConVMonitor;
|
monitor *ConVMonitor;
|
||||||
surface_integral *Waveshell;
|
surface_integral *Waveshell;
|
||||||
|
|||||||
@@ -161,8 +161,36 @@
|
|||||||
|
|
||||||
chi_rhs = F2o3 *chin1*( alpn1 * trK - div_beta ) !rhs for chi
|
chi_rhs = F2o3 *chin1*( alpn1 * trK - div_beta ) !rhs for chi
|
||||||
|
|
||||||
|
call fderivs(ex,dxx,gxxx,gxxy,gxxz,X,Y,Z,SYM ,SYM ,SYM ,Symmetry,Lev)
|
||||||
|
call fderivs(ex,gxy,gxyx,gxyy,gxyz,X,Y,Z,ANTI,ANTI,SYM ,Symmetry,Lev)
|
||||||
|
call fderivs(ex,gxz,gxzx,gxzy,gxzz,X,Y,Z,ANTI,SYM ,ANTI,Symmetry,Lev)
|
||||||
|
call fderivs(ex,dyy,gyyx,gyyy,gyyz,X,Y,Z,SYM ,SYM ,SYM ,Symmetry,Lev)
|
||||||
|
call fderivs(ex,gyz,gyzx,gyzy,gyzz,X,Y,Z,SYM ,ANTI,ANTI,Symmetry,Lev)
|
||||||
|
call fderivs(ex,dzz,gzzx,gzzy,gzzz,X,Y,Z,SYM ,SYM ,SYM ,Symmetry,Lev)
|
||||||
|
|
||||||
|
gxx_rhs = - TWO * alpn1 * Axx - F2o3 * gxx * div_beta + &
|
||||||
|
TWO *( gxx * betaxx + gxy * betayx + gxz * betazx)
|
||||||
|
|
||||||
|
gyy_rhs = - TWO * alpn1 * Ayy - F2o3 * gyy * div_beta + &
|
||||||
|
TWO *( gxy * betaxy + gyy * betayy + gyz * betazy)
|
||||||
|
|
||||||
|
gzz_rhs = - TWO * alpn1 * Azz - F2o3 * gzz * div_beta + &
|
||||||
|
TWO *( gxz * betaxz + gyz * betayz + gzz * betazz)
|
||||||
|
|
||||||
|
gxy_rhs = - TWO * alpn1 * Axy + F1o3 * gxy * div_beta + &
|
||||||
|
gxx * betaxy + gxz * betazy + &
|
||||||
|
gyy * betayx + gyz * betazx &
|
||||||
|
- gxy * betazz
|
||||||
|
|
||||||
|
gyz_rhs = - TWO * alpn1 * Ayz + F1o3 * gyz * div_beta + &
|
||||||
|
gxy * betaxz + gyy * betayz + &
|
||||||
|
gxz * betaxy + gzz * betazy &
|
||||||
|
- gyz * betaxx
|
||||||
|
|
||||||
|
gxz_rhs = - TWO * alpn1 * Axz + F1o3 * gxz * div_beta + &
|
||||||
|
gxx * betaxz + gxy * betayz + &
|
||||||
|
gyz * betayx + gzz * betazx &
|
||||||
|
- gxz * betayy !rhs for gij
|
||||||
|
|
||||||
! invert tilted metric
|
! invert tilted metric
|
||||||
gupzz = gxx * gyy * gzz + gxy * gyz * gxz + gxz * gxy * gyz - &
|
gupzz = gxx * gyy * gzz + gxy * gyz * gxz + gxz * gxy * gyz - &
|
||||||
@@ -173,12 +201,7 @@
|
|||||||
gupyy = ( gxx * gzz - gxz * gxz ) / gupzz
|
gupyy = ( gxx * gzz - gxz * gxz ) / gupzz
|
||||||
gupyz = - ( gxx * gyz - gxy * gxz ) / gupzz
|
gupyz = - ( gxx * gyz - gxy * gxz ) / gupzz
|
||||||
gupzz = ( gxx * gyy - gxy * gxy ) / gupzz
|
gupzz = ( gxx * gyy - gxy * gxy ) / gupzz
|
||||||
call fderivs(ex,dxx,gxxx,gxxy,gxxz,X,Y,Z,SYM ,SYM ,SYM ,Symmetry,Lev)
|
|
||||||
call fderivs(ex,gxy,gxyx,gxyy,gxyz,X,Y,Z,ANTI,ANTI,SYM ,Symmetry,Lev)
|
|
||||||
call fderivs(ex,gxz,gxzx,gxzy,gxzz,X,Y,Z,ANTI,SYM ,ANTI,Symmetry,Lev)
|
|
||||||
call fderivs(ex,dyy,gyyx,gyyy,gyyz,X,Y,Z,SYM ,SYM ,SYM ,Symmetry,Lev)
|
|
||||||
call fderivs(ex,gyz,gyzx,gyzy,gyzz,X,Y,Z,SYM ,ANTI,ANTI,Symmetry,Lev)
|
|
||||||
call fderivs(ex,dzz,gzzx,gzzy,gzzz,X,Y,Z,SYM ,SYM ,SYM ,Symmetry,Lev)
|
|
||||||
if(co == 0)then
|
if(co == 0)then
|
||||||
! Gam^i_Res = Gam^i + gup^ij_,j
|
! Gam^i_Res = Gam^i + gup^ij_,j
|
||||||
Gmx_Res = Gamx - (gupxx*(gupxx*gxxx+gupxy*gxyx+gupxz*gxzx)&
|
Gmx_Res = Gamx - (gupxx*(gupxx*gxxx+gupxy*gxyx+gupxz*gxzx)&
|
||||||
@@ -922,103 +945,60 @@
|
|||||||
SSA(2)=SYM
|
SSA(2)=SYM
|
||||||
SSA(3)=ANTI
|
SSA(3)=ANTI
|
||||||
|
|
||||||
!!!!!!!!!advection term part
|
!!!!!!!!!advection term + Kreiss-Oliger dissipation (merged for cache efficiency)
|
||||||
|
! lopsided_kodis shares the symmetry_bd buffer between advection and
|
||||||
|
! dissipation, eliminating redundant full-grid copies. For metric variables
|
||||||
|
! gxx/gyy/gzz (=dxx/dyy/dzz+1): kodis stencil coefficients sum to zero,
|
||||||
|
! so the constant offset has no effect on dissipation.
|
||||||
|
|
||||||
gxx_rhs = - TWO * alpn1 * Axx - F2o3 * gxx * div_beta + &
|
call lopsided_kodis(ex,X,Y,Z,gxx,gxx_rhs,betax,betay,betaz,Symmetry,SSS,eps)
|
||||||
TWO *( gxx * betaxx + gxy * betayx + gxz * betazx)
|
call lopsided_kodis(ex,X,Y,Z,gxy,gxy_rhs,betax,betay,betaz,Symmetry,AAS,eps)
|
||||||
|
call lopsided_kodis(ex,X,Y,Z,gxz,gxz_rhs,betax,betay,betaz,Symmetry,ASA,eps)
|
||||||
|
call lopsided_kodis(ex,X,Y,Z,gyy,gyy_rhs,betax,betay,betaz,Symmetry,SSS,eps)
|
||||||
|
call lopsided_kodis(ex,X,Y,Z,gyz,gyz_rhs,betax,betay,betaz,Symmetry,SAA,eps)
|
||||||
|
call lopsided_kodis(ex,X,Y,Z,gzz,gzz_rhs,betax,betay,betaz,Symmetry,SSS,eps)
|
||||||
|
|
||||||
gyy_rhs = - TWO * alpn1 * Ayy - F2o3 * gyy * div_beta + &
|
call lopsided_kodis(ex,X,Y,Z,Axx,Axx_rhs,betax,betay,betaz,Symmetry,SSS,eps)
|
||||||
TWO *( gxy * betaxy + gyy * betayy + gyz * betazy)
|
call lopsided_kodis(ex,X,Y,Z,Axy,Axy_rhs,betax,betay,betaz,Symmetry,AAS,eps)
|
||||||
|
call lopsided_kodis(ex,X,Y,Z,Axz,Axz_rhs,betax,betay,betaz,Symmetry,ASA,eps)
|
||||||
|
call lopsided_kodis(ex,X,Y,Z,Ayy,Ayy_rhs,betax,betay,betaz,Symmetry,SSS,eps)
|
||||||
|
call lopsided_kodis(ex,X,Y,Z,Ayz,Ayz_rhs,betax,betay,betaz,Symmetry,SAA,eps)
|
||||||
|
call lopsided_kodis(ex,X,Y,Z,Azz,Azz_rhs,betax,betay,betaz,Symmetry,SSS,eps)
|
||||||
|
|
||||||
gzz_rhs = - TWO * alpn1 * Azz - F2o3 * gzz * div_beta + &
|
call lopsided_kodis(ex,X,Y,Z,chi,chi_rhs,betax,betay,betaz,Symmetry,SSS,eps)
|
||||||
TWO *( gxz * betaxz + gyz * betayz + gzz * betazz)
|
call lopsided_kodis(ex,X,Y,Z,trK,trK_rhs,betax,betay,betaz,Symmetry,SSS,eps)
|
||||||
|
|
||||||
gxy_rhs = - TWO * alpn1 * Axy + F1o3 * gxy * div_beta + &
|
call lopsided_kodis(ex,X,Y,Z,Gamx,Gamx_rhs,betax,betay,betaz,Symmetry,ASS,eps)
|
||||||
gxx * betaxy + gxz * betazy + &
|
call lopsided_kodis(ex,X,Y,Z,Gamy,Gamy_rhs,betax,betay,betaz,Symmetry,SAS,eps)
|
||||||
gyy * betayx + gyz * betazx &
|
call lopsided_kodis(ex,X,Y,Z,Gamz,Gamz_rhs,betax,betay,betaz,Symmetry,SSA,eps)
|
||||||
- gxy * betazz
|
|
||||||
|
|
||||||
gyz_rhs = - TWO * alpn1 * Ayz + F1o3 * gyz * div_beta + &
|
#if 1
|
||||||
gxy * betaxz + gyy * betayz + &
|
!! bam does not apply dissipation on gauge variables
|
||||||
gxz * betaxy + gzz * betazy &
|
call lopsided_kodis(ex,X,Y,Z,Lap,Lap_rhs,betax,betay,betaz,Symmetry,SSS,eps)
|
||||||
- gyz * betaxx
|
#if (GAUGE == 0 || GAUGE == 1 || GAUGE == 2 || GAUGE == 3 || GAUGE == 4 || GAUGE == 5 || GAUGE == 6 || GAUGE == 7)
|
||||||
|
call lopsided_kodis(ex,X,Y,Z,betax,betax_rhs,betax,betay,betaz,Symmetry,ASS,eps)
|
||||||
gxz_rhs = - TWO * alpn1 * Axz + F1o3 * gxz * div_beta + &
|
call lopsided_kodis(ex,X,Y,Z,betay,betay_rhs,betax,betay,betaz,Symmetry,SAS,eps)
|
||||||
gxx * betaxz + gxy * betayz + &
|
call lopsided_kodis(ex,X,Y,Z,betaz,betaz_rhs,betax,betay,betaz,Symmetry,SSA,eps)
|
||||||
gyz * betayx + gzz * betazx &
|
#endif
|
||||||
- gxz * betayy !rhs for gij
|
#if (GAUGE == 0 || GAUGE == 2 || GAUGE == 3 || GAUGE == 6 || GAUGE == 7)
|
||||||
|
call lopsided_kodis(ex,X,Y,Z,dtSfx,dtSfx_rhs,betax,betay,betaz,Symmetry,ASS,eps)
|
||||||
|
call lopsided_kodis(ex,X,Y,Z,dtSfy,dtSfy_rhs,betax,betay,betaz,Symmetry,SAS,eps)
|
||||||
|
call lopsided_kodis(ex,X,Y,Z,dtSfz,dtSfz_rhs,betax,betay,betaz,Symmetry,SSA,eps)
|
||||||
|
#endif
|
||||||
|
#else
|
||||||
if(eps>0)then
|
! No dissipation on gauge variables (advection only)
|
||||||
! usual Kreiss-Oliger dissipation
|
|
||||||
call merge_lopsided_kodis(ex,X,Y,Z,chi,chi_rhs,betax,betay,betaz,Symmetry,SSS,eps)
|
|
||||||
call merge_lopsided_kodis(ex,X,Y,Z,gxx,gxx_rhs,betax,betay,betaz,Symmetry,SSS,eps)
|
|
||||||
call merge_lopsided_kodis(ex,X,Y,Z,gxy,gxy_rhs,betax,betay,betaz,Symmetry,AAS,eps)
|
|
||||||
call merge_lopsided_kodis(ex,X,Y,Z,gxz,gxz_rhs,betax,betay,betaz,Symmetry,ASA,eps)
|
|
||||||
call merge_lopsided_kodis(ex,X,Y,Z,gyy,gyy_rhs,betax,betay,betaz,Symmetry,SSS,eps)
|
|
||||||
call merge_lopsided_kodis(ex,X,Y,Z,gyz,gyz_rhs,betax,betay,betaz,Symmetry,SAA,eps)
|
|
||||||
call merge_lopsided_kodis(ex,X,Y,Z,gzz,gzz_rhs,betax,betay,betaz,Symmetry,SSS,eps)
|
|
||||||
call merge_lopsided_kodis(ex,X,Y,Z,Axx,Axx_rhs,betax,betay,betaz,Symmetry,SSS,eps)
|
|
||||||
call merge_lopsided_kodis(ex,X,Y,Z,Axy,Axy_rhs,betax,betay,betaz,Symmetry,AAS,eps)
|
|
||||||
call merge_lopsided_kodis(ex,X,Y,Z,Axz,Axz_rhs,betax,betay,betaz,Symmetry,ASA,eps)
|
|
||||||
call merge_lopsided_kodis(ex,X,Y,Z,Ayy,Ayy_rhs,betax,betay,betaz,Symmetry,SSS,eps)
|
|
||||||
call merge_lopsided_kodis(ex,X,Y,Z,Ayz,Ayz_rhs,betax,betay,betaz,Symmetry,SAA,eps)
|
|
||||||
call merge_lopsided_kodis(ex,X,Y,Z,Azz,Azz_rhs,betax,betay,betaz,Symmetry,SSS,eps)
|
|
||||||
call merge_lopsided_kodis(ex,X,Y,Z,chi,chi_rhs,betax,betay,betaz,Symmetry,SSS,eps)
|
|
||||||
call merge_lopsided_kodis(ex,X,Y,Z,trK,trK_rhs,betax,betay,betaz,Symmetry,SSS,eps)
|
|
||||||
call merge_lopsided_kodis(ex,X,Y,Z,Gamx,Gamx_rhs,betax,betay,betaz,Symmetry,ASS,eps)
|
|
||||||
call merge_lopsided_kodis(ex,X,Y,Z,Gamy,Gamy_rhs,betax,betay,betaz,Symmetry,SAS,eps)
|
|
||||||
call merge_lopsided_kodis(ex,X,Y,Z,Gamz,Gamz_rhs,betax,betay,betaz,Symmetry,SSA,eps)
|
|
||||||
call merge_lopsided_kodis(ex,X,Y,Z,Lap,Lap_rhs,betax,betay,betaz,Symmetry,SSS,eps)
|
|
||||||
call merge_lopsided_kodis(ex,X,Y,Z,betax,betax_rhs,betax,betay,betaz,Symmetry,ASS,eps)
|
|
||||||
call merge_lopsided_kodis(ex,X,Y,Z,betay,betay_rhs,betax,betay,betaz,Symmetry,SAS,eps)
|
|
||||||
call merge_lopsided_kodis(ex,X,Y,Z,betaz,betaz_rhs,betax,betay,betaz,Symmetry,SSA,eps)
|
|
||||||
call merge_lopsided_kodis(ex,X,Y,Z,dtSfx,dtSfx_rhs,betax,betay,betaz,Symmetry,ASS,eps)
|
|
||||||
call merge_lopsided_kodis(ex,X,Y,Z,dtSfy,dtSfy_rhs,betax,betay,betaz,Symmetry,SAS,eps)
|
|
||||||
call merge_lopsided_kodis(ex,X,Y,Z,dtSfz,dtSfz_rhs,betax,betay,betaz,Symmetry,SSA,eps)
|
|
||||||
|
|
||||||
|
|
||||||
|
|
||||||
|
|
||||||
|
|
||||||
|
|
||||||
|
|
||||||
|
|
||||||
|
|
||||||
|
|
||||||
|
|
||||||
|
|
||||||
else
|
|
||||||
call lopsided(ex,X,Y,Z,gxx,gxx_rhs,betax,betay,betaz,Symmetry,SSS)
|
|
||||||
call lopsided(ex,X,Y,Z,gxy,gxy_rhs,betax,betay,betaz,Symmetry,AAS)
|
|
||||||
call lopsided(ex,X,Y,Z,gxz,gxz_rhs,betax,betay,betaz,Symmetry,ASA)
|
|
||||||
call lopsided(ex,X,Y,Z,gyy,gyy_rhs,betax,betay,betaz,Symmetry,SSS)
|
|
||||||
call lopsided(ex,X,Y,Z,gyz,gyz_rhs,betax,betay,betaz,Symmetry,SAA)
|
|
||||||
call lopsided(ex,X,Y,Z,gzz,gzz_rhs,betax,betay,betaz,Symmetry,SSS)
|
|
||||||
call lopsided(ex,X,Y,Z,Axx,Axx_rhs,betax,betay,betaz,Symmetry,SSS)
|
|
||||||
call lopsided(ex,X,Y,Z,Axy,Axy_rhs,betax,betay,betaz,Symmetry,AAS)
|
|
||||||
call lopsided(ex,X,Y,Z,Axz,Axz_rhs,betax,betay,betaz,Symmetry,ASA)
|
|
||||||
call lopsided(ex,X,Y,Z,Ayy,Ayy_rhs,betax,betay,betaz,Symmetry,SSS)
|
|
||||||
call lopsided(ex,X,Y,Z,Ayz,Ayz_rhs,betax,betay,betaz,Symmetry,SAA)
|
|
||||||
call lopsided(ex,X,Y,Z,Azz,Azz_rhs,betax,betay,betaz,Symmetry,SSS)
|
|
||||||
call lopsided(ex,X,Y,Z,chi,chi_rhs,betax,betay,betaz,Symmetry,SSS)
|
|
||||||
call lopsided(ex,X,Y,Z,trK,trK_rhs,betax,betay,betaz,Symmetry,SSS)
|
|
||||||
call lopsided(ex,X,Y,Z,Gamx,Gamx_rhs,betax,betay,betaz,Symmetry,ASS)
|
|
||||||
call lopsided(ex,X,Y,Z,Gamy,Gamy_rhs,betax,betay,betaz,Symmetry,SAS)
|
|
||||||
call lopsided(ex,X,Y,Z,Gamz,Gamz_rhs,betax,betay,betaz,Symmetry,SSA)
|
|
||||||
call lopsided(ex,X,Y,Z,Lap,Lap_rhs,betax,betay,betaz,Symmetry,SSS)
|
call lopsided(ex,X,Y,Z,Lap,Lap_rhs,betax,betay,betaz,Symmetry,SSS)
|
||||||
|
#if (GAUGE == 0 || GAUGE == 1 || GAUGE == 2 || GAUGE == 3 || GAUGE == 4 || GAUGE == 5 || GAUGE == 6 || GAUGE == 7)
|
||||||
call lopsided(ex,X,Y,Z,betax,betax_rhs,betax,betay,betaz,Symmetry,ASS)
|
call lopsided(ex,X,Y,Z,betax,betax_rhs,betax,betay,betaz,Symmetry,ASS)
|
||||||
call lopsided(ex,X,Y,Z,betay,betay_rhs,betax,betay,betaz,Symmetry,SAS)
|
call lopsided(ex,X,Y,Z,betay,betay_rhs,betax,betay,betaz,Symmetry,SAS)
|
||||||
call lopsided(ex,X,Y,Z,betaz,betaz_rhs,betax,betay,betaz,Symmetry,SSA)
|
call lopsided(ex,X,Y,Z,betaz,betaz_rhs,betax,betay,betaz,Symmetry,SSA)
|
||||||
|
#endif
|
||||||
|
#if (GAUGE == 0 || GAUGE == 2 || GAUGE == 3 || GAUGE == 6 || GAUGE == 7)
|
||||||
call lopsided(ex,X,Y,Z,dtSfx,dtSfx_rhs,betax,betay,betaz,Symmetry,ASS)
|
call lopsided(ex,X,Y,Z,dtSfx,dtSfx_rhs,betax,betay,betaz,Symmetry,ASS)
|
||||||
call lopsided(ex,X,Y,Z,dtSfy,dtSfy_rhs,betax,betay,betaz,Symmetry,SAS)
|
call lopsided(ex,X,Y,Z,dtSfy,dtSfy_rhs,betax,betay,betaz,Symmetry,SAS)
|
||||||
call lopsided(ex,X,Y,Z,dtSfz,dtSfz_rhs,betax,betay,betaz,Symmetry,SSA)
|
call lopsided(ex,X,Y,Z,dtSfz,dtSfz_rhs,betax,betay,betaz,Symmetry,SSA)
|
||||||
|
#endif
|
||||||
|
#endif
|
||||||
endif
|
|
||||||
|
|
||||||
if(co == 0)then
|
if(co == 0)then
|
||||||
! ham_Res = trR + 2/3 * K^2 - A_ij * A^ij - 16 * PI * rho
|
! ham_Res = trR + 2/3 * K^2 - A_ij * A^ij - 16 * PI * rho
|
||||||
@@ -1163,265 +1143,3 @@ endif
|
|||||||
return
|
return
|
||||||
|
|
||||||
end function compute_rhs_bssn
|
end function compute_rhs_bssn
|
||||||
|
|
||||||
|
|
||||||
|
|
||||||
|
|
||||||
subroutine merge_lopsided_kodis(ex,X,Y,Z,f,f_rhs,Sfx,Sfy,Sfz,Symmetry,SoA,eps)
|
|
||||||
implicit none
|
|
||||||
|
|
||||||
!~~~~~~> Input parameters:
|
|
||||||
|
|
||||||
integer, intent(in) :: ex(1:3),Symmetry
|
|
||||||
real*8, intent(in) :: X(1:ex(1)),Y(1:ex(2)),Z(1:ex(3))
|
|
||||||
real*8,dimension(ex(1),ex(2),ex(3)),intent(in) :: f,Sfx,Sfy,Sfz
|
|
||||||
|
|
||||||
real*8,dimension(ex(1),ex(2),ex(3)),intent(inout):: f_rhs
|
|
||||||
real*8,dimension(3),intent(in) ::SoA
|
|
||||||
|
|
||||||
!~~~~~~> local variables:
|
|
||||||
! note index -2,-1,0, so we have 3 extra points
|
|
||||||
real*8,dimension(-2:ex(1),-2:ex(2),-2:ex(3)) :: fh
|
|
||||||
integer :: imin_lopsided,jmin_lopsided,kmin_lopsided,imin_kodis,jmin_kodis,kmin_kodis,imax,jmax,kmax,i,j,k
|
|
||||||
real*8 :: dX,dY,dZ
|
|
||||||
real*8 :: d12dx,d12dy,d12dz,d2dx,d2dy,d2dz
|
|
||||||
real*8, parameter :: ZEO=0.d0,ONE=1.d0, F3=3.d0
|
|
||||||
real*8, parameter :: TWO=2.d0,F6=6.0d0,F18=1.8d1
|
|
||||||
real*8, parameter :: F12=1.2d1, F10=1.d1,EIT=8.d0
|
|
||||||
integer, parameter :: NO_SYMM = 0, EQ_SYMM = 1, OCTANT = 2
|
|
||||||
real*8, parameter :: SIX=6.d0,FIT=1.5d1,TWT=2.d1
|
|
||||||
real*8,parameter::cof=6.4d1 ! 2^6
|
|
||||||
real*8,intent(in) :: eps
|
|
||||||
dX = X(2)-X(1)
|
|
||||||
dY = Y(2)-Y(1)
|
|
||||||
dZ = Z(2)-Z(1)
|
|
||||||
|
|
||||||
d12dx = ONE/F12/dX
|
|
||||||
d12dy = ONE/F12/dY
|
|
||||||
d12dz = ONE/F12/dZ
|
|
||||||
|
|
||||||
d2dx = ONE/TWO/dX
|
|
||||||
d2dy = ONE/TWO/dY
|
|
||||||
d2dz = ONE/TWO/dZ
|
|
||||||
|
|
||||||
imax = ex(1)
|
|
||||||
jmax = ex(2)
|
|
||||||
kmax = ex(3)
|
|
||||||
|
|
||||||
imin_lopsided = 1
|
|
||||||
jmin_lopsided = 1
|
|
||||||
kmin_lopsided = 1
|
|
||||||
if(Symmetry > NO_SYMM .and. dabs(Z(1)) < dZ) kmin_lopsided = -2
|
|
||||||
if(Symmetry > EQ_SYMM .and. dabs(X(1)) < dX) imin_lopsided = -2
|
|
||||||
if(Symmetry > EQ_SYMM .and. dabs(Y(1)) < dY) jmin_lopsided = -2
|
|
||||||
|
|
||||||
imin_kodis = 1
|
|
||||||
jmin_kodis = 1
|
|
||||||
kmin_kodis = 1
|
|
||||||
|
|
||||||
if(Symmetry > NO_SYMM .and. dabs(Z(1)) < dZ) kmin_kodis = -2
|
|
||||||
if(Symmetry == OCTANT .and. dabs(X(1)) < dX) imin_kodis = -2
|
|
||||||
if(Symmetry == OCTANT .and. dabs(Y(1)) < dY) jmin_kodis = -2
|
|
||||||
|
|
||||||
|
|
||||||
call symmetry_bd(3,ex,f,fh,SoA)
|
|
||||||
|
|
||||||
! upper bound set ex-1 only for efficiency,
|
|
||||||
! the loop body will set ex 0 also
|
|
||||||
do k=1,ex(3)-1
|
|
||||||
do j=1,ex(2)-1
|
|
||||||
do i=1,ex(1)-1
|
|
||||||
|
|
||||||
!! new code, 2012dec27, based on bam
|
|
||||||
! x direction
|
|
||||||
if(Sfx(i,j,k) > ZEO)then
|
|
||||||
if(i+3 <= imax)then
|
|
||||||
! v
|
|
||||||
! D f = ------[ - 3f - 10f + 18f - 6f + f ]
|
|
||||||
! i 12dx i-v i i+v i+2v i+3v
|
|
||||||
f_rhs(i,j,k)=f_rhs(i,j,k)+ &
|
|
||||||
Sfx(i,j,k)*d12dx*(-F3*fh(i-1,j,k)-F10*fh(i,j,k)+F18*fh(i+1,j,k) &
|
|
||||||
-F6*fh(i+2,j,k)+ fh(i+3,j,k))
|
|
||||||
elseif(i+2 <= imax)then
|
|
||||||
!
|
|
||||||
! f(i-2) - 8 f(i-1) + 8 f(i+1) - f(i+2)
|
|
||||||
! fx(i) = ---------------------------------------------
|
|
||||||
! 12 dx
|
|
||||||
f_rhs(i,j,k)=f_rhs(i,j,k)+ &
|
|
||||||
Sfx(i,j,k)*d12dx*(fh(i-2,j,k)-EIT*fh(i-1,j,k)+EIT*fh(i+1,j,k)-fh(i+2,j,k))
|
|
||||||
|
|
||||||
elseif(i+1 <= imax)then
|
|
||||||
! v
|
|
||||||
! D f = ------[ 3f + 10f - 18f + 6f - f ]
|
|
||||||
! i 12dx i+v i i-v i-2v i-3v
|
|
||||||
f_rhs(i,j,k)=f_rhs(i,j,k)- &
|
|
||||||
Sfx(i,j,k)*d12dx*(-F3*fh(i+1,j,k)-F10*fh(i,j,k)+F18*fh(i-1,j,k) &
|
|
||||||
-F6*fh(i-2,j,k)+ fh(i-3,j,k))
|
|
||||||
! set imax and imin_lopsided 0
|
|
||||||
endif
|
|
||||||
elseif(Sfx(i,j,k) < ZEO)then
|
|
||||||
if(i-3 >= imin_lopsided)then
|
|
||||||
! v
|
|
||||||
! D f = ------[ - 3f - 10f + 18f - 6f + f ]
|
|
||||||
! i 12dx i-v i i+v i+2v i+3v
|
|
||||||
f_rhs(i,j,k)=f_rhs(i,j,k)- &
|
|
||||||
Sfx(i,j,k)*d12dx*(-F3*fh(i+1,j,k)-F10*fh(i,j,k)+F18*fh(i-1,j,k) &
|
|
||||||
-F6*fh(i-2,j,k)+ fh(i-3,j,k))
|
|
||||||
elseif(i-2 >= imin_lopsided)then
|
|
||||||
!
|
|
||||||
! f(i-2) - 8 f(i-1) + 8 f(i+1) - f(i+2)
|
|
||||||
! fx(i) = ---------------------------------------------
|
|
||||||
! 12 dx
|
|
||||||
f_rhs(i,j,k)=f_rhs(i,j,k)+ &
|
|
||||||
Sfx(i,j,k)*d12dx*(fh(i-2,j,k)-EIT*fh(i-1,j,k)+EIT*fh(i+1,j,k)-fh(i+2,j,k))
|
|
||||||
|
|
||||||
elseif(i-1 >= imin_lopsided)then
|
|
||||||
! v
|
|
||||||
! D f = ------[ 3f + 10f - 18f + 6f - f ]
|
|
||||||
! i 12dx i+v i i-v i-2v i-3v
|
|
||||||
f_rhs(i,j,k)=f_rhs(i,j,k)+ &
|
|
||||||
Sfx(i,j,k)*d12dx*(-F3*fh(i-1,j,k)-F10*fh(i,j,k)+F18*fh(i+1,j,k) &
|
|
||||||
-F6*fh(i+2,j,k)+ fh(i+3,j,k))
|
|
||||||
! set imax and imin_lopsided 0
|
|
||||||
endif
|
|
||||||
endif
|
|
||||||
|
|
||||||
! y direction
|
|
||||||
if(Sfy(i,j,k) > ZEO)then
|
|
||||||
if(j+3 <= jmax)then
|
|
||||||
! v
|
|
||||||
! D f = ------[ - 3f - 10f + 18f - 6f + f ]
|
|
||||||
! i 12dx i-v i i+v i+2v i+3v
|
|
||||||
f_rhs(i,j,k)=f_rhs(i,j,k)+ &
|
|
||||||
Sfy(i,j,k)*d12dy*(-F3*fh(i,j-1,k)-F10*fh(i,j,k)+F18*fh(i,j+1,k) &
|
|
||||||
-F6*fh(i,j+2,k)+ fh(i,j+3,k))
|
|
||||||
elseif(j+2 <= jmax)then
|
|
||||||
!
|
|
||||||
! f(i-2) - 8 f(i-1) + 8 f(i+1) - f(i+2)
|
|
||||||
! fx(i) = ---------------------------------------------
|
|
||||||
! 12 dx
|
|
||||||
f_rhs(i,j,k)=f_rhs(i,j,k)+ &
|
|
||||||
Sfy(i,j,k)*d12dy*(fh(i,j-2,k)-EIT*fh(i,j-1,k)+EIT*fh(i,j+1,k)-fh(i,j+2,k))
|
|
||||||
|
|
||||||
elseif(j+1 <= jmax)then
|
|
||||||
! v
|
|
||||||
! D f = ------[ 3f + 10f - 18f + 6f - f ]
|
|
||||||
! i 12dx i+v i i-v i-2v i-3v
|
|
||||||
f_rhs(i,j,k)=f_rhs(i,j,k)- &
|
|
||||||
Sfy(i,j,k)*d12dy*(-F3*fh(i,j+1,k)-F10*fh(i,j,k)+F18*fh(i,j-1,k) &
|
|
||||||
-F6*fh(i,j-2,k)+ fh(i,j-3,k))
|
|
||||||
! set imax and imin_lopsided 0
|
|
||||||
endif
|
|
||||||
elseif(Sfy(i,j,k) < ZEO)then
|
|
||||||
if(j-3 >= jmin_lopsided)then
|
|
||||||
! v
|
|
||||||
! D f = ------[ - 3f - 10f + 18f - 6f + f ]
|
|
||||||
! i 12dx i-v i i+v i+2v i+3v
|
|
||||||
f_rhs(i,j,k)=f_rhs(i,j,k)- &
|
|
||||||
Sfy(i,j,k)*d12dy*(-F3*fh(i,j+1,k)-F10*fh(i,j,k)+F18*fh(i,j-1,k) &
|
|
||||||
-F6*fh(i,j-2,k)+ fh(i,j-3,k))
|
|
||||||
elseif(j-2 >= jmin_lopsided)then
|
|
||||||
!
|
|
||||||
! f(i-2) - 8 f(i-1) + 8 f(i+1) - f(i+2)
|
|
||||||
! fx(i) = ---------------------------------------------
|
|
||||||
! 12 dx
|
|
||||||
f_rhs(i,j,k)=f_rhs(i,j,k)+ &
|
|
||||||
Sfy(i,j,k)*d12dy*(fh(i,j-2,k)-EIT*fh(i,j-1,k)+EIT*fh(i,j+1,k)-fh(i,j+2,k))
|
|
||||||
|
|
||||||
elseif(j-1 >= jmin_lopsided)then
|
|
||||||
! v
|
|
||||||
! D f = ------[ 3f + 10f - 18f + 6f - f ]
|
|
||||||
! i 12dx i+v i i-v i-2v i-3v
|
|
||||||
f_rhs(i,j,k)=f_rhs(i,j,k)+ &
|
|
||||||
Sfy(i,j,k)*d12dy*(-F3*fh(i,j-1,k)-F10*fh(i,j,k)+F18*fh(i,j+1,k) &
|
|
||||||
-F6*fh(i,j+2,k)+ fh(i,j+3,k))
|
|
||||||
! set jmax and jmin_lopsided 0
|
|
||||||
endif
|
|
||||||
endif
|
|
||||||
|
|
||||||
! z direction
|
|
||||||
if(Sfz(i,j,k) > ZEO)then
|
|
||||||
if(k+3 <= kmax)then
|
|
||||||
! v
|
|
||||||
! D f = ------[ - 3f - 10f + 18f - 6f + f ]
|
|
||||||
! i 12dx i-v i i+v i+2v i+3v
|
|
||||||
f_rhs(i,j,k)=f_rhs(i,j,k)+ &
|
|
||||||
Sfz(i,j,k)*d12dz*(-F3*fh(i,j,k-1)-F10*fh(i,j,k)+F18*fh(i,j,k+1) &
|
|
||||||
-F6*fh(i,j,k+2)+ fh(i,j,k+3))
|
|
||||||
elseif(k+2 <= kmax)then
|
|
||||||
!
|
|
||||||
! f(i-2) - 8 f(i-1) + 8 f(i+1) - f(i+2)
|
|
||||||
! fx(i) = ---------------------------------------------
|
|
||||||
! 12 dx
|
|
||||||
f_rhs(i,j,k)=f_rhs(i,j,k)+ &
|
|
||||||
Sfz(i,j,k)*d12dz*(fh(i,j,k-2)-EIT*fh(i,j,k-1)+EIT*fh(i,j,k+1)-fh(i,j,k+2))
|
|
||||||
|
|
||||||
elseif(k+1 <= kmax)then
|
|
||||||
! v
|
|
||||||
! D f = ------[ 3f + 10f - 18f + 6f - f ]
|
|
||||||
! i 12dx i+v i i-v i-2v i-3v
|
|
||||||
f_rhs(i,j,k)=f_rhs(i,j,k)- &
|
|
||||||
Sfz(i,j,k)*d12dz*(-F3*fh(i,j,k+1)-F10*fh(i,j,k)+F18*fh(i,j,k-1) &
|
|
||||||
-F6*fh(i,j,k-2)+ fh(i,j,k-3))
|
|
||||||
! set imax and imin_lopsided 0
|
|
||||||
endif
|
|
||||||
elseif(Sfz(i,j,k) < ZEO)then
|
|
||||||
if(k-3 >= kmin_lopsided)then
|
|
||||||
! v
|
|
||||||
! D f = ------[ - 3f - 10f + 18f - 6f + f ]
|
|
||||||
! i 12dx i-v i i+v i+2v i+3v
|
|
||||||
f_rhs(i,j,k)=f_rhs(i,j,k)- &
|
|
||||||
Sfz(i,j,k)*d12dz*(-F3*fh(i,j,k+1)-F10*fh(i,j,k)+F18*fh(i,j,k-1) &
|
|
||||||
-F6*fh(i,j,k-2)+ fh(i,j,k-3))
|
|
||||||
elseif(k-2 >= kmin_lopsided)then
|
|
||||||
!
|
|
||||||
! f(i-2) - 8 f(i-1) + 8 f(i+1) - f(i+2)
|
|
||||||
! fx(i) = ---------------------------------------------
|
|
||||||
! 12 dx
|
|
||||||
f_rhs(i,j,k)=f_rhs(i,j,k)+ &
|
|
||||||
Sfz(i,j,k)*d12dz*(fh(i,j,k-2)-EIT*fh(i,j,k-1)+EIT*fh(i,j,k+1)-fh(i,j,k+2))
|
|
||||||
|
|
||||||
elseif(k-1 >= kmin_lopsided)then
|
|
||||||
! v
|
|
||||||
! D f = ------[ 3f + 10f - 18f + 6f - f ]
|
|
||||||
! i 12dx i+v i i-v i-2v i-3v
|
|
||||||
f_rhs(i,j,k)=f_rhs(i,j,k)+ &
|
|
||||||
Sfz(i,j,k)*d12dz*(-F3*fh(i,j,k-1)-F10*fh(i,j,k)+F18*fh(i,j,k+1) &
|
|
||||||
-F6*fh(i,j,k+2)+ fh(i,j,k+3))
|
|
||||||
! set kmax and kmin_lopsided 0
|
|
||||||
endif
|
|
||||||
endif
|
|
||||||
|
|
||||||
|
|
||||||
if(i-3 >= imin_kodis .and. i+3 <= imax .and. &
|
|
||||||
j-3 >= jmin_kodis .and. j+3 <= jmax .and. &
|
|
||||||
k-3 >= kmin_kodis .and. k+3 <= kmax) then
|
|
||||||
|
|
||||||
! calculation order if important ?
|
|
||||||
f_rhs(i,j,k) = f_rhs(i,j,k) + eps/cof *( ( &
|
|
||||||
(fh(i-3,j,k)+fh(i+3,j,k)) - &
|
|
||||||
SIX*(fh(i-2,j,k)+fh(i+2,j,k)) + &
|
|
||||||
FIT*(fh(i-1,j,k)+fh(i+1,j,k)) - &
|
|
||||||
TWT* fh(i,j,k) )/dX + &
|
|
||||||
( &
|
|
||||||
(fh(i,j-3,k)+fh(i,j+3,k)) - &
|
|
||||||
SIX*(fh(i,j-2,k)+fh(i,j+2,k)) + &
|
|
||||||
FIT*(fh(i,j-1,k)+fh(i,j+1,k)) - &
|
|
||||||
TWT* fh(i,j,k) )/dY + &
|
|
||||||
( &
|
|
||||||
(fh(i,j,k-3)+fh(i,j,k+3)) - &
|
|
||||||
SIX*(fh(i,j,k-2)+fh(i,j,k+2)) + &
|
|
||||||
FIT*(fh(i,j,k-1)+fh(i,j,k+1)) - &
|
|
||||||
TWT* fh(i,j,k) )/dZ )
|
|
||||||
|
|
||||||
endif
|
|
||||||
|
|
||||||
enddo
|
|
||||||
enddo
|
|
||||||
enddo
|
|
||||||
|
|
||||||
return
|
|
||||||
|
|
||||||
|
|
||||||
|
|
||||||
end subroutine merge_lopsided_kodis
|
|
||||||
|
|||||||
@@ -1000,7 +1000,86 @@
|
|||||||
do k=1,ex(3)-1
|
do k=1,ex(3)-1
|
||||||
do j=1,ex(2)-1
|
do j=1,ex(2)-1
|
||||||
do i=1,ex(1)-1
|
do i=1,ex(1)-1
|
||||||
|
#if 0
|
||||||
|
! x direction
|
||||||
|
if(i+2 <= imax .and. i-2 >= imin)then
|
||||||
|
!
|
||||||
|
! f(i-2) - 8 f(i-1) + 8 f(i+1) - f(i+2)
|
||||||
|
! fx(i) = ---------------------------------------------
|
||||||
|
! 12 dx
|
||||||
|
fx(i,j,k)=d12dx*(fh(i-2,j,k)-EIT*fh(i-1,j,k)+EIT*fh(i+1,j,k)-fh(i+2,j,k))
|
||||||
|
|
||||||
|
elseif(i+1 <= imax .and. i-1 >= imin)then
|
||||||
|
!
|
||||||
|
! - f(i-1) + f(i+1)
|
||||||
|
! fx(i) = --------------------------------
|
||||||
|
! 2 dx
|
||||||
|
fx(i,j,k)=d2dx*(-fh(i-1,j,k)+fh(i+1,j,k))
|
||||||
|
|
||||||
|
! set imax and imin 0
|
||||||
|
endif
|
||||||
|
! y direction
|
||||||
|
if(j+2 <= jmax .and. j-2 >= jmin)then
|
||||||
|
|
||||||
|
fy(i,j,k)=d12dy*(fh(i,j-2,k)-EIT*fh(i,j-1,k)+EIT*fh(i,j+1,k)-fh(i,j+2,k))
|
||||||
|
|
||||||
|
elseif(j+1 <= jmax .and. j-1 >= jmin)then
|
||||||
|
|
||||||
|
fy(i,j,k)=d2dy*(-fh(i,j-1,k)+fh(i,j+1,k))
|
||||||
|
|
||||||
|
! set jmax and jmin 0
|
||||||
|
endif
|
||||||
|
! z direction
|
||||||
|
if(k+2 <= kmax .and. k-2 >= kmin)then
|
||||||
|
|
||||||
|
fz(i,j,k)=d12dz*(fh(i,j,k-2)-EIT*fh(i,j,k-1)+EIT*fh(i,j,k+1)-fh(i,j,k+2))
|
||||||
|
|
||||||
|
elseif(k+1 <= kmax .and. k-1 >= kmin)then
|
||||||
|
|
||||||
|
fz(i,j,k)=d2dz*(-fh(i,j,k-1)+fh(i,j,k+1))
|
||||||
|
|
||||||
|
! set kmax and kmin 0
|
||||||
|
endif
|
||||||
|
#elif 0
|
||||||
|
! x direction
|
||||||
|
if(i+2 <= imax .and. i-2 >= imin)then
|
||||||
|
!
|
||||||
|
! f(i-2) - 8 f(i-1) + 8 f(i+1) - f(i+2)
|
||||||
|
! fx(i) = ---------------------------------------------
|
||||||
|
! 12 dx
|
||||||
|
fx(i,j,k)=d12dx*(fh(i-2,j,k)-EIT*fh(i-1,j,k)+EIT*fh(i+1,j,k)-fh(i+2,j,k))
|
||||||
|
|
||||||
|
elseif(i+3 <= imax .and. i-1 >= imin)then
|
||||||
|
fx(i,j,k)=d12dx*(-3.d0*fh(i-1,j,k)-1.d1*fh(i,j,k)+1.8d1*fh(i+1,j,k)-6.d0*fh(i+2,j,k)+fh(i+3,j,k))
|
||||||
|
elseif(i+1 <= imax .and. i-3 >= imin)then
|
||||||
|
fx(i,j,k)=d12dx*( 3.d0*fh(i+1,j,k)+1.d1*fh(i,j,k)-1.8d1*fh(i-1,j,k)+6.d0*fh(i-2,j,k)-fh(i-3,j,k))
|
||||||
|
! set imax and imin 0
|
||||||
|
endif
|
||||||
|
! y direction
|
||||||
|
if(j+2 <= jmax .and. j-2 >= jmin)then
|
||||||
|
|
||||||
|
fy(i,j,k)=d12dy*(fh(i,j-2,k)-EIT*fh(i,j-1,k)+EIT*fh(i,j+1,k)-fh(i,j+2,k))
|
||||||
|
|
||||||
|
elseif(j+3 <= jmax .and. j-1 >= jmin)then
|
||||||
|
fy(i,j,k)=d12dy*(-3.d0*fh(i,j-1,k)-1.d1*fh(i,j,k)+1.8d1*fh(i,j+1,k)-6.d0*fh(i,j+2,k)+fh(i,j+3,k))
|
||||||
|
elseif(j+1 <= jmax .and. j-3 >= jmin)then
|
||||||
|
fy(i,j,k)=d12dy*( 3.d0*fh(i,j+1,k)+1.d1*fh(i,j,k)-1.8d1*fh(i,j-1,k)+6.d0*fh(i,j-2,k)-fh(i,j-3,k))
|
||||||
|
|
||||||
|
! set jmax and jmin 0
|
||||||
|
endif
|
||||||
|
! z direction
|
||||||
|
if(k+2 <= kmax .and. k-2 >= kmin)then
|
||||||
|
|
||||||
|
fz(i,j,k)=d12dz*(fh(i,j,k-2)-EIT*fh(i,j,k-1)+EIT*fh(i,j,k+1)-fh(i,j,k+2))
|
||||||
|
|
||||||
|
elseif(k+3 <= kmax .and. k-1 >= kmin)then
|
||||||
|
fz(i,j,k)=d12dz*(-3.d0*fh(i,j,k-1)-1.d1*fh(i,j,k)+1.8d1*fh(i,j,k+1)-6.d0*fh(i,j,k+2)+fh(i,j,k+3))
|
||||||
|
elseif(k+1 <= kmax .and. k-3 >= kmin)then
|
||||||
|
fz(i,j,k)=d12dz*( 3.d0*fh(i,j,k+1)+1.d1*fh(i,j,k)-1.8d1*fh(i,j,k-1)+6.d0*fh(i,j,k-2)-fh(i,j,k-3))
|
||||||
|
|
||||||
|
! set kmax and kmin 0
|
||||||
|
endif
|
||||||
|
#else
|
||||||
! for bam comparison
|
! for bam comparison
|
||||||
if(i+2 <= imax .and. i-2 >= imin .and. &
|
if(i+2 <= imax .and. i-2 >= imin .and. &
|
||||||
j+2 <= jmax .and. j-2 >= jmin .and. &
|
j+2 <= jmax .and. j-2 >= jmin .and. &
|
||||||
@@ -1015,7 +1094,7 @@
|
|||||||
fy(i,j,k)=d2dy*(-fh(i,j-1,k)+fh(i,j+1,k))
|
fy(i,j,k)=d2dy*(-fh(i,j-1,k)+fh(i,j+1,k))
|
||||||
fz(i,j,k)=d2dz*(-fh(i,j,k-1)+fh(i,j,k+1))
|
fz(i,j,k)=d2dz*(-fh(i,j,k-1)+fh(i,j,k+1))
|
||||||
endif
|
endif
|
||||||
|
#endif
|
||||||
enddo
|
enddo
|
||||||
enddo
|
enddo
|
||||||
enddo
|
enddo
|
||||||
@@ -1325,7 +1404,85 @@
|
|||||||
do k=1,ex(3)-1
|
do k=1,ex(3)-1
|
||||||
do j=1,ex(2)-1
|
do j=1,ex(2)-1
|
||||||
do i=1,ex(1)-1
|
do i=1,ex(1)-1
|
||||||
|
#if 0
|
||||||
|
!~~~~~~ fxx
|
||||||
|
if(i+2 <= imax .and. i-2 >= imin)then
|
||||||
|
!
|
||||||
|
! - f(i-2) + 16 f(i-1) - 30 f(i) + 16 f(i+1) - f(i+2)
|
||||||
|
! fxx(i) = ----------------------------------------------------------
|
||||||
|
! 12 dx^2
|
||||||
|
fxx(i,j,k) = Fdxdx*(-fh(i-2,j,k)+F16*fh(i-1,j,k)-F30*fh(i,j,k) &
|
||||||
|
-fh(i+2,j,k)+F16*fh(i+1,j,k) )
|
||||||
|
elseif(i+1 <= imax .and. i-1 >= imin)then
|
||||||
|
!
|
||||||
|
! f(i-1) - 2 f(i) + f(i+1)
|
||||||
|
! fxx(i) = --------------------------------
|
||||||
|
! dx^2
|
||||||
|
fxx(i,j,k) = Sdxdx*(fh(i-1,j,k)-TWO*fh(i,j,k) &
|
||||||
|
+fh(i+1,j,k) )
|
||||||
|
endif
|
||||||
|
|
||||||
|
|
||||||
|
!~~~~~~ fyy
|
||||||
|
if(j+2 <= jmax .and. j-2 >= jmin)then
|
||||||
|
|
||||||
|
fyy(i,j,k) = Fdydy*(-fh(i,j-2,k)+F16*fh(i,j-1,k)-F30*fh(i,j,k) &
|
||||||
|
-fh(i,j+2,k)+F16*fh(i,j+1,k) )
|
||||||
|
elseif(j+1 <= jmax .and. j-1 >= jmin)then
|
||||||
|
|
||||||
|
fyy(i,j,k) = Sdydy*(fh(i,j-1,k)-TWO*fh(i,j,k) &
|
||||||
|
+fh(i,j+1,k) )
|
||||||
|
endif
|
||||||
|
|
||||||
|
!~~~~~~ fzz
|
||||||
|
if(k+2 <= kmax .and. k-2 >= kmin)then
|
||||||
|
|
||||||
|
fzz(i,j,k) = Fdzdz*(-fh(i,j,k-2)+F16*fh(i,j,k-1)-F30*fh(i,j,k) &
|
||||||
|
-fh(i,j,k+2)+F16*fh(i,j,k+1) )
|
||||||
|
elseif(k+1 <= kmax .and. k-1 >= kmin)then
|
||||||
|
|
||||||
|
fzz(i,j,k) = Sdzdz*(fh(i,j,k-1)-TWO*fh(i,j,k) &
|
||||||
|
+fh(i,j,k+1) )
|
||||||
|
endif
|
||||||
|
!~~~~~~ fxy
|
||||||
|
if(i+2 <= imax .and. i-2 >= imin .and. j+2 <= jmax .and. j-2 >= jmin)then
|
||||||
|
!
|
||||||
|
! ( f(i-2,j-2) - 8 f(i-1,j-2) + 8 f(i+1,j-2) - f(i+2,j-2) )
|
||||||
|
! - 8 ( f(i-2,j-1) - 8 f(i-1,j-1) + 8 f(i+1,j-1) - f(i+2,j-1) )
|
||||||
|
! + 8 ( f(i-2,j+1) - 8 f(i-1,j+1) + 8 f(i+1,j+1) - f(i+2,j+1) )
|
||||||
|
! - ( f(i-2,j+2) - 8 f(i-1,j+2) + 8 f(i+1,j+2) - f(i+2,j+2) )
|
||||||
|
! fxy(i,j) = ----------------------------------------------------------------
|
||||||
|
! 144 dx dy
|
||||||
|
fxy(i,j,k) = Fdxdy*( (fh(i-2,j-2,k)-F8*fh(i-1,j-2,k)+F8*fh(i+1,j-2,k)-fh(i+2,j-2,k)) &
|
||||||
|
-F8 *(fh(i-2,j-1,k)-F8*fh(i-1,j-1,k)+F8*fh(i+1,j-1,k)-fh(i+2,j-1,k)) &
|
||||||
|
+F8 *(fh(i-2,j+1,k)-F8*fh(i-1,j+1,k)+F8*fh(i+1,j+1,k)-fh(i+2,j+1,k)) &
|
||||||
|
- (fh(i-2,j+2,k)-F8*fh(i-1,j+2,k)+F8*fh(i+1,j+2,k)-fh(i+2,j+2,k)))
|
||||||
|
|
||||||
|
elseif(i+1 <= imax .and. i-1 >= imin .and. j+1 <= jmax .and. j-1 >= jmin)then
|
||||||
|
! f(i-1,j-1) - f(i+1,j-1) - f(i-1,j+1) + f(i+1,j+1)
|
||||||
|
! fxy(i,j) = -----------------------------------------------------------
|
||||||
|
! 4 dx dy
|
||||||
|
fxy(i,j,k) = Sdxdy*(fh(i-1,j-1,k)-fh(i+1,j-1,k)-fh(i-1,j+1,k)+fh(i+1,j+1,k))
|
||||||
|
endif
|
||||||
|
!~~~~~~ fxz
|
||||||
|
if(i+2 <= imax .and. i-2 >= imin .and. k+2 <= kmax .and. k-2 >= kmin)then
|
||||||
|
fxz(i,j,k) = Fdxdz*( (fh(i-2,j,k-2)-F8*fh(i-1,j,k-2)+F8*fh(i+1,j,k-2)-fh(i+2,j,k-2)) &
|
||||||
|
-F8 *(fh(i-2,j,k-1)-F8*fh(i-1,j,k-1)+F8*fh(i+1,j,k-1)-fh(i+2,j,k-1)) &
|
||||||
|
+F8 *(fh(i-2,j,k+1)-F8*fh(i-1,j,k+1)+F8*fh(i+1,j,k+1)-fh(i+2,j,k+1)) &
|
||||||
|
- (fh(i-2,j,k+2)-F8*fh(i-1,j,k+2)+F8*fh(i+1,j,k+2)-fh(i+2,j,k+2)))
|
||||||
|
elseif(i+1 <= imax .and. i-1 >= imin .and. k+1 <= kmax .and. k-1 >= kmin)then
|
||||||
|
fxz(i,j,k) = Sdxdz*(fh(i-1,j,k-1)-fh(i+1,j,k-1)-fh(i-1,j,k+1)+fh(i+1,j,k+1))
|
||||||
|
endif
|
||||||
|
!~~~~~~ fyz
|
||||||
|
if(j+2 <= jmax .and. j-2 >= jmin .and. k+2 <= kmax .and. k-2 >= kmin)then
|
||||||
|
fyz(i,j,k) = Fdydz*( (fh(i,j-2,k-2)-F8*fh(i,j-1,k-2)+F8*fh(i,j+1,k-2)-fh(i,j+2,k-2)) &
|
||||||
|
-F8 *(fh(i,j-2,k-1)-F8*fh(i,j-1,k-1)+F8*fh(i,j+1,k-1)-fh(i,j+2,k-1)) &
|
||||||
|
+F8 *(fh(i,j-2,k+1)-F8*fh(i,j-1,k+1)+F8*fh(i,j+1,k+1)-fh(i,j+2,k+1)) &
|
||||||
|
- (fh(i,j-2,k+2)-F8*fh(i,j-1,k+2)+F8*fh(i,j+1,k+2)-fh(i,j+2,k+2)))
|
||||||
|
elseif(j+1 <= jmax .and. j-1 >= jmin .and. k+1 <= kmax .and. k-1 >= kmin)then
|
||||||
|
fyz(i,j,k) = Sdydz*(fh(i,j-1,k-1)-fh(i,j+1,k-1)-fh(i,j-1,k+1)+fh(i,j+1,k+1))
|
||||||
|
endif
|
||||||
|
#else
|
||||||
! for bam comparison
|
! for bam comparison
|
||||||
if(i+2 <= imax .and. i-2 >= imin .and. &
|
if(i+2 <= imax .and. i-2 >= imin .and. &
|
||||||
j+2 <= jmax .and. j-2 >= jmin .and. &
|
j+2 <= jmax .and. j-2 >= jmin .and. &
|
||||||
@@ -1361,7 +1518,7 @@
|
|||||||
fxz(i,j,k) = Sdxdz*(fh(i-1,j,k-1)-fh(i+1,j,k-1)-fh(i-1,j,k+1)+fh(i+1,j,k+1))
|
fxz(i,j,k) = Sdxdz*(fh(i-1,j,k-1)-fh(i+1,j,k-1)-fh(i-1,j,k+1)+fh(i+1,j,k+1))
|
||||||
fyz(i,j,k) = Sdydz*(fh(i,j-1,k-1)-fh(i,j+1,k-1)-fh(i,j-1,k+1)+fh(i,j+1,k+1))
|
fyz(i,j,k) = Sdydz*(fh(i,j-1,k-1)-fh(i,j+1,k-1)-fh(i,j-1,k+1)+fh(i,j+1,k+1))
|
||||||
endif
|
endif
|
||||||
|
#endif
|
||||||
enddo
|
enddo
|
||||||
enddo
|
enddo
|
||||||
enddo
|
enddo
|
||||||
|
|||||||
@@ -326,8 +326,7 @@ subroutine symmetry_bd(ord,extc,func,funcc,SoA)
|
|||||||
|
|
||||||
funcc(1:extc(1),1:extc(2),1:extc(3)) = func
|
funcc(1:extc(1),1:extc(2),1:extc(3)) = func
|
||||||
do i=0,ord-1
|
do i=0,ord-1
|
||||||
|
funcc(-i,1:extc(2),1:extc(3)) = funcc(i+2,1:extc(2),1:extc(3))*SoA(1)
|
||||||
funcc(-i,1:extc(2),1:extc(3)) = funcc(i+2,1:extc(2),1:extc(3))*SoA(1)
|
|
||||||
enddo
|
enddo
|
||||||
do i=0,ord-1
|
do i=0,ord-1
|
||||||
funcc(:,-i,1:extc(3)) = funcc(:,i+2,1:extc(3))*SoA(2)
|
funcc(:,-i,1:extc(3)) = funcc(:,i+2,1:extc(3))*SoA(2)
|
||||||
|
|||||||
@@ -6,6 +6,101 @@
|
|||||||
! Vertex or Cell is distinguished in routine symmetry_bd which locates in
|
! Vertex or Cell is distinguished in routine symmetry_bd which locates in
|
||||||
! file "fmisc.f90"
|
! file "fmisc.f90"
|
||||||
|
|
||||||
|
#if (ghost_width == 2)
|
||||||
|
! second order code
|
||||||
|
|
||||||
|
!------------------------------------------------------------------------------------------------------------------------------
|
||||||
|
!usual type Kreiss-Oliger type numerical dissipation
|
||||||
|
!We support cell center only
|
||||||
|
! (D_+D_-)^2 =
|
||||||
|
! f(i-2) - 4 f(i-1) + 6 f(i) - 4 f(i+1) + f(i+2)
|
||||||
|
! ------------------------------------------------------
|
||||||
|
! dx^4
|
||||||
|
!------------------------------------------------------------------------------------------------------------------------------
|
||||||
|
! do not add dissipation near boundary
|
||||||
|
subroutine kodis(ex,X,Y,Z,f,f_rhs,SoA,Symmetry,eps)
|
||||||
|
|
||||||
|
implicit none
|
||||||
|
! argument variables
|
||||||
|
integer,intent(in) :: Symmetry
|
||||||
|
integer,dimension(3),intent(in)::ex
|
||||||
|
real*8, dimension(1:3), intent(in) :: SoA
|
||||||
|
double precision,intent(in),dimension(ex(1))::X
|
||||||
|
double precision,intent(in),dimension(ex(2))::Y
|
||||||
|
double precision,intent(in),dimension(ex(3))::Z
|
||||||
|
double precision,intent(in),dimension(ex(1),ex(2),ex(3))::f
|
||||||
|
double precision,intent(inout),dimension(ex(1),ex(2),ex(3))::f_rhs
|
||||||
|
real*8,intent(in) :: eps
|
||||||
|
|
||||||
|
!~~~~~~ other variables
|
||||||
|
|
||||||
|
real*8 :: dX,dY,dZ
|
||||||
|
real*8,dimension(-1:ex(1),-1:ex(2),-1:ex(3)) :: fh
|
||||||
|
integer :: imin,jmin,kmin,imax,jmax,kmax
|
||||||
|
integer, parameter :: NO_SYMM = 0, EQ_SYMM = 1, OCTANT = 2
|
||||||
|
real*8,parameter :: cof = 1.6d1 ! 2^4
|
||||||
|
real*8, parameter :: F4=4.d0,F6=6.d0
|
||||||
|
integer::i,j,k
|
||||||
|
|
||||||
|
dX = X(2)-X(1)
|
||||||
|
dY = Y(2)-Y(1)
|
||||||
|
dZ = Z(2)-Z(1)
|
||||||
|
|
||||||
|
imax = ex(1)
|
||||||
|
jmax = ex(2)
|
||||||
|
kmax = ex(3)
|
||||||
|
|
||||||
|
imin = 1
|
||||||
|
jmin = 1
|
||||||
|
kmin = 1
|
||||||
|
|
||||||
|
if(Symmetry > NO_SYMM .and. dabs(Z(1)) < dZ) kmin = -1
|
||||||
|
if(Symmetry > EQ_SYMM .and. dabs(X(1)) < dX) imin = -1
|
||||||
|
if(Symmetry > EQ_SYMM .and. dabs(Y(1)) < dY) jmin = -1
|
||||||
|
|
||||||
|
call symmetry_bd(2,ex,f,fh,SoA)
|
||||||
|
|
||||||
|
! f(i-2) - 4 f(i-1) + 6 f(i) - 4 f(i+1) + f(i+2)
|
||||||
|
! ------------------------------------------------------
|
||||||
|
! dx^4
|
||||||
|
|
||||||
|
! note the sign (-1)^r-1, now r=2
|
||||||
|
do k=1,ex(3)
|
||||||
|
do j=1,ex(2)
|
||||||
|
do i=1,ex(1)
|
||||||
|
|
||||||
|
if(i-2 >= imin .and. i+2 <= imax .and. &
|
||||||
|
j-2 >= jmin .and. j+2 <= jmax .and. &
|
||||||
|
k-2 >= kmin .and. k+2 <= kmax) then
|
||||||
|
! x direction
|
||||||
|
f_rhs(i,j,k) = f_rhs(i,j,k) - eps/dX/cof * ( &
|
||||||
|
(fh(i-2,j,k)+fh(i+2,j,k)) &
|
||||||
|
- F4 * (fh(i-1,j,k)+fh(i+1,j,k)) &
|
||||||
|
+ F6 * fh(i,j,k) )
|
||||||
|
! y direction
|
||||||
|
|
||||||
|
f_rhs(i,j,k) = f_rhs(i,j,k) - eps/dY/cof * ( &
|
||||||
|
(fh(i,j-2,k)+fh(i,j+2,k)) &
|
||||||
|
- F4 * (fh(i,j-1,k)+fh(i,j+1,k)) &
|
||||||
|
+ F6 * fh(i,j,k) )
|
||||||
|
! z direction
|
||||||
|
|
||||||
|
f_rhs(i,j,k) = f_rhs(i,j,k) - eps/dZ/cof * ( &
|
||||||
|
(fh(i,j,k-2)+fh(i,j,k+2)) &
|
||||||
|
- F4 * (fh(i,j,k-1)+fh(i,j,k+1)) &
|
||||||
|
+ F6 * fh(i,j,k) )
|
||||||
|
|
||||||
|
endif
|
||||||
|
|
||||||
|
enddo
|
||||||
|
enddo
|
||||||
|
enddo
|
||||||
|
|
||||||
|
return
|
||||||
|
|
||||||
|
end subroutine kodis
|
||||||
|
|
||||||
|
#elif (ghost_width == 3)
|
||||||
! fourth order code
|
! fourth order code
|
||||||
|
|
||||||
!---------------------------------------------------------------------------------------------
|
!---------------------------------------------------------------------------------------------
|
||||||
@@ -61,7 +156,7 @@ integer, parameter :: NO_SYMM=0, OCTANT=2
|
|||||||
if(Symmetry > NO_SYMM .and. dabs(Z(1)) < dZ) kmin = -2
|
if(Symmetry > NO_SYMM .and. dabs(Z(1)) < dZ) kmin = -2
|
||||||
if(Symmetry == OCTANT .and. dabs(X(1)) < dX) imin = -2
|
if(Symmetry == OCTANT .and. dabs(X(1)) < dX) imin = -2
|
||||||
if(Symmetry == OCTANT .and. dabs(Y(1)) < dY) jmin = -2
|
if(Symmetry == OCTANT .and. dabs(Y(1)) < dY) jmin = -2
|
||||||
!print*,'imin,jmin,kmin=',imin,jmin,kmin
|
|
||||||
call symmetry_bd(3,ex,f,fh,SoA)
|
call symmetry_bd(3,ex,f,fh,SoA)
|
||||||
|
|
||||||
do k=1,ex(3)
|
do k=1,ex(3)
|
||||||
@@ -71,7 +166,28 @@ integer, parameter :: NO_SYMM=0, OCTANT=2
|
|||||||
if(i-3 >= imin .and. i+3 <= imax .and. &
|
if(i-3 >= imin .and. i+3 <= imax .and. &
|
||||||
j-3 >= jmin .and. j+3 <= jmax .and. &
|
j-3 >= jmin .and. j+3 <= jmax .and. &
|
||||||
k-3 >= kmin .and. k+3 <= kmax) then
|
k-3 >= kmin .and. k+3 <= kmax) then
|
||||||
|
#if 0
|
||||||
|
! x direction
|
||||||
|
f_rhs(i,j,k) = f_rhs(i,j,k) + eps/dX/cof * ( &
|
||||||
|
(fh(i-3,j,k)+fh(i+3,j,k)) - &
|
||||||
|
SIX*(fh(i-2,j,k)+fh(i+2,j,k)) + &
|
||||||
|
FIT*(fh(i-1,j,k)+fh(i+1,j,k)) - &
|
||||||
|
TWT* fh(i,j,k) )
|
||||||
|
! y direction
|
||||||
|
|
||||||
|
f_rhs(i,j,k) = f_rhs(i,j,k) + eps/dY/cof * ( &
|
||||||
|
(fh(i,j-3,k)+fh(i,j+3,k)) - &
|
||||||
|
SIX*(fh(i,j-2,k)+fh(i,j+2,k)) + &
|
||||||
|
FIT*(fh(i,j-1,k)+fh(i,j+1,k)) - &
|
||||||
|
TWT* fh(i,j,k) )
|
||||||
|
! z direction
|
||||||
|
|
||||||
|
f_rhs(i,j,k) = f_rhs(i,j,k) + eps/dZ/cof * ( &
|
||||||
|
(fh(i,j,k-3)+fh(i,j,k+3)) - &
|
||||||
|
SIX*(fh(i,j,k-2)+fh(i,j,k+2)) + &
|
||||||
|
FIT*(fh(i,j,k-1)+fh(i,j,k+1)) - &
|
||||||
|
TWT* fh(i,j,k) )
|
||||||
|
#else
|
||||||
! calculation order if important ?
|
! calculation order if important ?
|
||||||
f_rhs(i,j,k) = f_rhs(i,j,k) + eps/cof *( ( &
|
f_rhs(i,j,k) = f_rhs(i,j,k) + eps/cof *( ( &
|
||||||
(fh(i-3,j,k)+fh(i+3,j,k)) - &
|
(fh(i-3,j,k)+fh(i+3,j,k)) - &
|
||||||
@@ -88,7 +204,7 @@ integer, parameter :: NO_SYMM=0, OCTANT=2
|
|||||||
SIX*(fh(i,j,k-2)+fh(i,j,k+2)) + &
|
SIX*(fh(i,j,k-2)+fh(i,j,k+2)) + &
|
||||||
FIT*(fh(i,j,k-1)+fh(i,j,k+1)) - &
|
FIT*(fh(i,j,k-1)+fh(i,j,k+1)) - &
|
||||||
TWT* fh(i,j,k) )/dZ )
|
TWT* fh(i,j,k) )/dZ )
|
||||||
|
#endif
|
||||||
endif
|
endif
|
||||||
|
|
||||||
enddo
|
enddo
|
||||||
@@ -99,6 +215,218 @@ integer, parameter :: NO_SYMM=0, OCTANT=2
|
|||||||
|
|
||||||
end subroutine kodis
|
end subroutine kodis
|
||||||
|
|
||||||
|
#elif (ghost_width == 4)
|
||||||
|
! sixth order code
|
||||||
|
!------------------------------------------------------------------------------------------------------------------------------
|
||||||
|
!usual type Kreiss-Oliger type numerical dissipation
|
||||||
|
!We support cell center only
|
||||||
|
! (D_+D_-)^4 =
|
||||||
|
! f(i-4) - 8 f(i-3) + 28 f(i-2) - 56 f(i-1) + 70 f(i) - 56 f(i+1) + 28 f(i+2) - 8 f(i+3) + f(i+4)
|
||||||
|
! ----------------------------------------------------------------------------------------------------------
|
||||||
|
! dx^8
|
||||||
|
!------------------------------------------------------------------------------------------------------------------------------
|
||||||
|
! do not add dissipation near boundary
|
||||||
|
subroutine kodis(ex,X,Y,Z,f,f_rhs,SoA,Symmetry,eps)
|
||||||
|
|
||||||
|
implicit none
|
||||||
|
! argument variables
|
||||||
|
integer,intent(in) :: Symmetry
|
||||||
|
integer,dimension(3),intent(in)::ex
|
||||||
|
real*8, dimension(1:3), intent(in) :: SoA
|
||||||
|
double precision,intent(in),dimension(ex(1))::X
|
||||||
|
double precision,intent(in),dimension(ex(2))::Y
|
||||||
|
double precision,intent(in),dimension(ex(3))::Z
|
||||||
|
double precision,intent(in),dimension(ex(1),ex(2),ex(3))::f
|
||||||
|
double precision,intent(inout),dimension(ex(1),ex(2),ex(3))::f_rhs
|
||||||
|
real*8,intent(in) :: eps
|
||||||
|
|
||||||
|
!~~~~~~ other variables
|
||||||
|
|
||||||
|
real*8 :: dX,dY,dZ
|
||||||
|
real*8,dimension(-3:ex(1),-3:ex(2),-3:ex(3)) :: fh
|
||||||
|
integer :: imin,jmin,kmin,imax,jmax,kmax
|
||||||
|
integer, parameter :: NO_SYMM = 0, EQ_SYMM = 1, OCTANT = 2
|
||||||
|
real*8,parameter :: cof = 2.56d2 ! 2^8
|
||||||
|
real*8, parameter :: F8=8.d0,F28=2.8d1,F56=5.6d1,F70=7.d1
|
||||||
|
integer::i,j,k
|
||||||
|
|
||||||
|
dX = X(2)-X(1)
|
||||||
|
dY = Y(2)-Y(1)
|
||||||
|
dZ = Z(2)-Z(1)
|
||||||
|
|
||||||
|
imax = ex(1)
|
||||||
|
jmax = ex(2)
|
||||||
|
kmax = ex(3)
|
||||||
|
|
||||||
|
imin = 1
|
||||||
|
jmin = 1
|
||||||
|
kmin = 1
|
||||||
|
|
||||||
|
if(Symmetry > NO_SYMM .and. dabs(Z(1)) < dZ) kmin = -3
|
||||||
|
if(Symmetry > EQ_SYMM .and. dabs(X(1)) < dX) imin = -3
|
||||||
|
if(Symmetry > EQ_SYMM .and. dabs(Y(1)) < dY) jmin = -3
|
||||||
|
|
||||||
|
call symmetry_bd(4,ex,f,fh,SoA)
|
||||||
|
|
||||||
|
! f(i-4) - 8 f(i-3) + 28 f(i-2) - 56 f(i-1) + 70 f(i) - 56 f(i+1) + 28 f(i+2) - 8 f(i+3) + f(i+4)
|
||||||
|
! ----------------------------------------------------------------------------------------------------------
|
||||||
|
! dx^8
|
||||||
|
|
||||||
|
! note the sign (-1)^r-1, now r=4
|
||||||
|
do k=1,ex(3)
|
||||||
|
do j=1,ex(2)
|
||||||
|
do i=1,ex(1)
|
||||||
|
|
||||||
|
if(i>imin+3 .and. i < imax-3 .and. &
|
||||||
|
j>jmin+3 .and. j < jmax-3 .and. &
|
||||||
|
k>kmin+3 .and. k < kmax-3) then
|
||||||
|
! x direction
|
||||||
|
f_rhs(i,j,k) = f_rhs(i,j,k) - eps/dX/cof * ( &
|
||||||
|
(fh(i-4,j,k)+fh(i+4,j,k)) &
|
||||||
|
- F8 * (fh(i-3,j,k)+fh(i+3,j,k)) &
|
||||||
|
+F28 * (fh(i-2,j,k)+fh(i+2,j,k)) &
|
||||||
|
-F56 * (fh(i-1,j,k)+fh(i+1,j,k)) &
|
||||||
|
+F70 * fh(i,j,k) )
|
||||||
|
! y direction
|
||||||
|
|
||||||
|
f_rhs(i,j,k) = f_rhs(i,j,k) - eps/dY/cof * ( &
|
||||||
|
(fh(i,j-4,k)+fh(i,j+4,k)) &
|
||||||
|
- F8 * (fh(i,j-3,k)+fh(i,j+3,k)) &
|
||||||
|
+F28 * (fh(i,j-2,k)+fh(i,j+2,k)) &
|
||||||
|
-F56 * (fh(i,j-1,k)+fh(i,j+1,k)) &
|
||||||
|
+F70 * fh(i,j,k) )
|
||||||
|
! z direction
|
||||||
|
|
||||||
|
f_rhs(i,j,k) = f_rhs(i,j,k) - eps/dZ/cof * ( &
|
||||||
|
(fh(i,j,k-4)+fh(i,j,k+4)) &
|
||||||
|
- F8 * (fh(i,j,k-3)+fh(i,j,k+3)) &
|
||||||
|
+F28 * (fh(i,j,k-2)+fh(i,j,k+2)) &
|
||||||
|
-F56 * (fh(i,j,k-1)+fh(i,j,k+1)) &
|
||||||
|
+F70 * fh(i,j,k) )
|
||||||
|
|
||||||
|
endif
|
||||||
|
|
||||||
|
enddo
|
||||||
|
enddo
|
||||||
|
enddo
|
||||||
|
|
||||||
|
return
|
||||||
|
|
||||||
|
end subroutine kodis
|
||||||
|
|
||||||
|
#elif (ghost_width == 5)
|
||||||
|
! eighth order code
|
||||||
|
!------------------------------------------------------------------------------------------------------------------------------
|
||||||
|
!usual type Kreiss-Oliger type numerical dissipation
|
||||||
|
!We support cell center only
|
||||||
|
! Note the notation D_+ and D_- [P240 of B. Gustafsson, H.-O. Kreiss, and J. Oliger, Time
|
||||||
|
! Dependent Problems and Difference Methods (Wiley, New York, 1995).]
|
||||||
|
! D_+ = (f(i+1) - f(i))/h
|
||||||
|
! D_- = (f(i) - f(i-1))/h
|
||||||
|
! then we have D_+D_- = D_-D_+ = (f(i+1) - 2f(i) + f(i-1))/h^2
|
||||||
|
! for nth order accurate finite difference code, we need r =n/2+1
|
||||||
|
! D_+^rD_-^r = (D_+D_-)^r
|
||||||
|
! following the tradiation of PRD 77, 024027 (BB's calibration paper, Eq.(64),
|
||||||
|
! correct some typo according to above book) :
|
||||||
|
! + eps*(-1)^(r-1)*h^(2r-1)/2^(2r)*(D_+D_-)^r
|
||||||
|
!
|
||||||
|
!
|
||||||
|
! this is for 8th order accurate finite difference scheme
|
||||||
|
! (D_+D_-)^5 =
|
||||||
|
! f(i-5) - 10 f(i-4) + 45 f(i-3) - 120 f(i-2) + 210 f(i-1) - 252 f(i) + 210 f(i+1) - 120 f(i+2) + 45 f(i+3) - 10 f(i+4) + f(i+5)
|
||||||
|
! -------------------------------------------------------------------------------------------------------------------------------
|
||||||
|
! dx^10
|
||||||
|
!---------------------------------------------------------------------------------------------------------------------------------
|
||||||
|
! do not add dissipation near boundary
|
||||||
|
subroutine kodis(ex,X,Y,Z,f,f_rhs,SoA,Symmetry,eps)
|
||||||
|
|
||||||
|
implicit none
|
||||||
|
! argument variables
|
||||||
|
integer,intent(in) :: Symmetry
|
||||||
|
integer,dimension(3),intent(in)::ex
|
||||||
|
real*8, dimension(1:3), intent(in) :: SoA
|
||||||
|
double precision,intent(in),dimension(ex(1))::X
|
||||||
|
double precision,intent(in),dimension(ex(2))::Y
|
||||||
|
double precision,intent(in),dimension(ex(3))::Z
|
||||||
|
double precision,intent(in),dimension(ex(1),ex(2),ex(3))::f
|
||||||
|
double precision,intent(inout),dimension(ex(1),ex(2),ex(3))::f_rhs
|
||||||
|
real*8,intent(in) :: eps
|
||||||
|
|
||||||
|
!~~~~~~ other variables
|
||||||
|
|
||||||
|
real*8 :: dX,dY,dZ
|
||||||
|
real*8,dimension(-4:ex(1),-4:ex(2),-4:ex(3)) :: fh
|
||||||
|
integer :: imin,jmin,kmin,imax,jmax,kmax
|
||||||
|
integer, parameter :: NO_SYMM = 0, EQ_SYMM = 1, OCTANT = 2
|
||||||
|
real*8,parameter :: cof = 1.024d3 ! 2^2r = 2^10
|
||||||
|
real*8, parameter :: F10=1.d1,F45=4.5d1,F120=1.2d2,F210=2.1d2,F252=2.52d2
|
||||||
|
integer::i,j,k
|
||||||
|
|
||||||
|
dX = X(2)-X(1)
|
||||||
|
dY = Y(2)-Y(1)
|
||||||
|
dZ = Z(2)-Z(1)
|
||||||
|
|
||||||
|
imax = ex(1)
|
||||||
|
jmax = ex(2)
|
||||||
|
kmax = ex(3)
|
||||||
|
|
||||||
|
imin = 1
|
||||||
|
jmin = 1
|
||||||
|
kmin = 1
|
||||||
|
|
||||||
|
if(Symmetry > NO_SYMM .and. dabs(Z(1)) < dZ) kmin = -4
|
||||||
|
if(Symmetry > EQ_SYMM .and. dabs(X(1)) < dX) imin = -4
|
||||||
|
if(Symmetry > EQ_SYMM .and. dabs(Y(1)) < dY) jmin = -4
|
||||||
|
|
||||||
|
call symmetry_bd(5,ex,f,fh,SoA)
|
||||||
|
|
||||||
|
! f(i-5) - 10 f(i-4) + 45 f(i-3) - 120 f(i-2) + 210 f(i-1) - 252 f(i) + 210 f(i+1) - 120 f(i+2) + 45 f(i+3) - 10 f(i+4) + f(i+5)
|
||||||
|
! -------------------------------------------------------------------------------------------------------------------------------
|
||||||
|
! dx^10
|
||||||
|
|
||||||
|
! note the sign (-1)^r-1, now r=5
|
||||||
|
do k=1,ex(3)
|
||||||
|
do j=1,ex(2)
|
||||||
|
do i=1,ex(1)
|
||||||
|
|
||||||
|
if(i>imin+4 .and. i < imax-4 .and. &
|
||||||
|
j>jmin+4 .and. j < jmax-4 .and. &
|
||||||
|
k>kmin+4 .and. k < kmax-4) then
|
||||||
|
! x direction
|
||||||
|
f_rhs(i,j,k) = f_rhs(i,j,k) + eps/dX/cof * ( &
|
||||||
|
(fh(i-5,j,k)+fh(i+5,j,k)) &
|
||||||
|
- F10 * (fh(i-4,j,k)+fh(i+4,j,k)) &
|
||||||
|
+ F45 * (fh(i-3,j,k)+fh(i+3,j,k)) &
|
||||||
|
- F120* (fh(i-2,j,k)+fh(i+2,j,k)) &
|
||||||
|
+ F210* (fh(i-1,j,k)+fh(i+1,j,k)) &
|
||||||
|
- F252 * fh(i,j,k) )
|
||||||
|
! y direction
|
||||||
|
|
||||||
|
f_rhs(i,j,k) = f_rhs(i,j,k) + eps/dY/cof * ( &
|
||||||
|
(fh(i,j-5,k)+fh(i,j+5,k)) &
|
||||||
|
- F10 * (fh(i,j-4,k)+fh(i,j+4,k)) &
|
||||||
|
+ F45 * (fh(i,j-3,k)+fh(i,j+3,k)) &
|
||||||
|
- F120* (fh(i,j-2,k)+fh(i,j+2,k)) &
|
||||||
|
+ F210* (fh(i,j-1,k)+fh(i,j+1,k)) &
|
||||||
|
- F252 * fh(i,j,k) )
|
||||||
|
! z direction
|
||||||
|
|
||||||
|
f_rhs(i,j,k) = f_rhs(i,j,k) + eps/dZ/cof * ( &
|
||||||
|
(fh(i,j,k-5)+fh(i,j,k+5)) &
|
||||||
|
- F10 * (fh(i,j,k-4)+fh(i,j,k+4)) &
|
||||||
|
+ F45 * (fh(i,j,k-3)+fh(i,j,k+3)) &
|
||||||
|
- F120* (fh(i,j,k-2)+fh(i,j,k+2)) &
|
||||||
|
+ F210* (fh(i,j,k-1)+fh(i,j,k+1)) &
|
||||||
|
- F252 * fh(i,j,k) )
|
||||||
|
|
||||||
|
endif
|
||||||
|
|
||||||
|
enddo
|
||||||
|
enddo
|
||||||
|
enddo
|
||||||
|
|
||||||
|
return
|
||||||
|
|
||||||
|
end subroutine kodis
|
||||||
|
|
||||||
|
#endif
|
||||||
|
|||||||
@@ -7,7 +7,163 @@
|
|||||||
! Vertex or Cell is distinguished in routine symmetry_bd which locates in
|
! Vertex or Cell is distinguished in routine symmetry_bd which locates in
|
||||||
! file "fmisc.f90"
|
! file "fmisc.f90"
|
||||||
|
|
||||||
|
#if (ghost_width == 2)
|
||||||
|
! second order code
|
||||||
|
|
||||||
|
!-----------------------------------------------------------------------------
|
||||||
|
! v
|
||||||
|
! D f = ------[ - 3 f + 4 f - f ]
|
||||||
|
! i 2dx i i+v i+2v
|
||||||
|
!
|
||||||
|
! where
|
||||||
|
!
|
||||||
|
! i
|
||||||
|
! |B |
|
||||||
|
! v = -----
|
||||||
|
! i
|
||||||
|
! B
|
||||||
|
!
|
||||||
|
!-----------------------------------------------------------------------------
|
||||||
|
subroutine lopsided(ex,X,Y,Z,f,f_rhs,Sfx,Sfy,Sfz,Symmetry,SoA)
|
||||||
|
implicit none
|
||||||
|
|
||||||
|
!~~~~~~> Input parameters:
|
||||||
|
|
||||||
|
integer, intent(in) :: ex(1:3),Symmetry
|
||||||
|
real*8, intent(in) :: X(1:ex(1)),Y(1:ex(2)),Z(1:ex(3))
|
||||||
|
real*8,dimension(ex(1),ex(2),ex(3)),intent(in) :: f,Sfx,Sfy,Sfz
|
||||||
|
|
||||||
|
real*8,dimension(ex(1),ex(2),ex(3)),intent(inout):: f_rhs
|
||||||
|
real*8,dimension(3),intent(in) ::SoA
|
||||||
|
|
||||||
|
!~~~~~~> local variables:
|
||||||
|
! note index -1,0, so we have 2 extra points
|
||||||
|
real*8,dimension(-1:ex(1),-1:ex(2),-1:ex(3)) :: fh
|
||||||
|
integer :: imin,jmin,kmin,imax,jmax,kmax,i,j,k
|
||||||
|
real*8 :: dX,dY,dZ
|
||||||
|
real*8 :: d2dx,d2dy,d2dz
|
||||||
|
real*8, parameter :: ZEO=0.d0,ONE=1.d0,TWO=2.d0,THR=3.d0,FOUR=4.d0
|
||||||
|
integer, parameter :: NO_SYMM = 0, EQ_SYMM = 1, OCTANT = 2
|
||||||
|
|
||||||
|
dX = X(2)-X(1)
|
||||||
|
dY = Y(2)-Y(1)
|
||||||
|
dZ = Z(2)-Z(1)
|
||||||
|
|
||||||
|
d2dx = ONE/TWO/dX
|
||||||
|
d2dy = ONE/TWO/dY
|
||||||
|
d2dz = ONE/TWO/dZ
|
||||||
|
|
||||||
|
imax = ex(1)
|
||||||
|
jmax = ex(2)
|
||||||
|
kmax = ex(3)
|
||||||
|
|
||||||
|
imin = 1
|
||||||
|
jmin = 1
|
||||||
|
kmin = 1
|
||||||
|
if(Symmetry > NO_SYMM .and. dabs(Z(1)) < dZ) kmin = -1
|
||||||
|
if(Symmetry > EQ_SYMM .and. dabs(X(1)) < dX) imin = -1
|
||||||
|
if(Symmetry > EQ_SYMM .and. dabs(Y(1)) < dY) jmin = -1
|
||||||
|
|
||||||
|
call symmetry_bd(2,ex,f,fh,SoA)
|
||||||
|
|
||||||
|
! upper bound set ex-1 only for efficiency,
|
||||||
|
! the loop body will set ex 0 also
|
||||||
|
do k=1,ex(3)-1
|
||||||
|
do j=1,ex(2)-1
|
||||||
|
do i=1,ex(1)-1
|
||||||
|
! x direction
|
||||||
|
if(Sfx(i,j,k) >= ZEO)then
|
||||||
|
if( i+2 <= imax .and. i >= imin)then
|
||||||
|
! v
|
||||||
|
! D f = ------[ - 3 f + 4 f - f ]
|
||||||
|
! i 2dx i i+v i+2v
|
||||||
|
f_rhs(i,j,k)=f_rhs(i,j,k)+ &
|
||||||
|
Sfx(i,j,k)*d2dx*(-THR*fh(i,j,k)+FOUR*fh(i+1,j,k)-fh(i+2,j,k))
|
||||||
|
elseif(i+1 <= imax .and. i >= imin)then
|
||||||
|
! v
|
||||||
|
! D f = ------[ - f + f ]
|
||||||
|
! i dx i i+v
|
||||||
|
f_rhs(i,j,k)=f_rhs(i,j,k)+ &
|
||||||
|
Sfx(i,j,k)*d2dx*(-fh(i,j,k)+fh(i+1,j,k))
|
||||||
|
|
||||||
|
endif
|
||||||
|
|
||||||
|
elseif(Sfx(i,j,k) <= ZEO)then
|
||||||
|
if( i-2 >= imin .and. i <= imax)then
|
||||||
|
f_rhs(i,j,k)=f_rhs(i,j,k)- &
|
||||||
|
Sfx(i,j,k)*d2dx*(-THR*fh(i,j,k)+FOUR*fh(i-1,j,k)-fh(i-2,j,k))
|
||||||
|
elseif(i-1 >= imin .and. i <= imax)then
|
||||||
|
f_rhs(i,j,k)=f_rhs(i,j,k)- &
|
||||||
|
Sfx(i,j,k)*d2dx*(-fh(i,j,k)+fh(i-1,j,k))
|
||||||
|
endif
|
||||||
|
|
||||||
|
! set imax and imin 0
|
||||||
|
endif
|
||||||
|
|
||||||
|
! y direction
|
||||||
|
if(Sfy(i,j,k) >= ZEO)then
|
||||||
|
if( j+2 <= jmax .and. j >= jmin)then
|
||||||
|
! v
|
||||||
|
! D f = ------[ - 3 f + 4 f - f ]
|
||||||
|
! i 2dx i i+v i+2v
|
||||||
|
f_rhs(i,j,k)=f_rhs(i,j,k)+ &
|
||||||
|
Sfy(i,j,k)*d2dy*(-THR*fh(i,j,k)+FOUR*fh(i,j+1,k)-fh(i,j+2,k))
|
||||||
|
elseif(j+1 <= jmax .and. j >= jmin)then
|
||||||
|
! v
|
||||||
|
! D f = ------[ - f + f ]
|
||||||
|
! i dx i i+v
|
||||||
|
f_rhs(i,j,k)=f_rhs(i,j,k)+ &
|
||||||
|
Sfy(i,j,k)*d2dy*(-fh(i,j,k)+fh(i,j+1,k))
|
||||||
|
endif
|
||||||
|
|
||||||
|
elseif(Sfy(i,j,k) <= ZEO)then
|
||||||
|
if( j-2 >= jmin .and. j <= jmax)then
|
||||||
|
f_rhs(i,j,k)=f_rhs(i,j,k)- &
|
||||||
|
Sfy(i,j,k)*d2dy*(-THR*fh(i,j,k)+FOUR*fh(i,j-1,k)-fh(i,j-2,k))
|
||||||
|
elseif(j-1 >= jmin .and. j <= jmax)then
|
||||||
|
f_rhs(i,j,k)=f_rhs(i,j,k)- &
|
||||||
|
Sfy(i,j,k)*d2dy*(-fh(i,j,k)+fh(i,j-1,k))
|
||||||
|
endif
|
||||||
|
|
||||||
|
! set jmin and jmax 0
|
||||||
|
endif
|
||||||
|
!! z direction
|
||||||
|
if(Sfz(i,j,k) >= ZEO)then
|
||||||
|
if( k+2 <= kmax .and. k >= kmin)then
|
||||||
|
! v
|
||||||
|
! D f = ------[ - 3 f + 4 f - f ]
|
||||||
|
! i 2dx i i+v i+2v
|
||||||
|
f_rhs(i,j,k)=f_rhs(i,j,k)+ &
|
||||||
|
Sfz(i,j,k)*d2dz*(-THR*fh(i,j,k)+FOUR*fh(i,j,k+1)-fh(i,j,k+2))
|
||||||
|
elseif(k+1 <= kmax .and. k >= kmin)then
|
||||||
|
! v
|
||||||
|
! D f = ------[ - f + f ]
|
||||||
|
! i dx i i+v
|
||||||
|
f_rhs(i,j,k)=f_rhs(i,j,k)+ &
|
||||||
|
Sfz(i,j,k)*d2dz*(-fh(i,j,k)+fh(i,j,k+1))
|
||||||
|
endif
|
||||||
|
|
||||||
|
elseif(Sfz(i,j,k) <= ZEO)then
|
||||||
|
if( k-2 >= kmin .and. k <= kmax)then
|
||||||
|
f_rhs(i,j,k)=f_rhs(i,j,k)- &
|
||||||
|
Sfz(i,j,k)*d2dz*(-THR*fh(i,j,k)+FOUR*fh(i,j,k-1)-fh(i,j,k-2))
|
||||||
|
elseif(k-1 >= kmin .and. k <= kmax)then
|
||||||
|
f_rhs(i,j,k)=f_rhs(i,j,k)- &
|
||||||
|
Sfz(i,j,k)*d2dz*(-fh(i,j,k)+fh(i,j,k-1))
|
||||||
|
endif
|
||||||
|
|
||||||
|
! set kmin and kmax 0
|
||||||
|
endif
|
||||||
|
|
||||||
|
enddo
|
||||||
|
enddo
|
||||||
|
enddo
|
||||||
|
|
||||||
|
return
|
||||||
|
|
||||||
|
end subroutine lopsided
|
||||||
|
|
||||||
|
#elif (ghost_width == 3)
|
||||||
! fourth order code
|
! fourth order code
|
||||||
|
|
||||||
!-----------------------------------------------------------------------------
|
!-----------------------------------------------------------------------------
|
||||||
@@ -80,7 +236,89 @@ subroutine lopsided(ex,X,Y,Z,f,f_rhs,Sfx,Sfy,Sfz,Symmetry,SoA)
|
|||||||
do k=1,ex(3)-1
|
do k=1,ex(3)-1
|
||||||
do j=1,ex(2)-1
|
do j=1,ex(2)-1
|
||||||
do i=1,ex(1)-1
|
do i=1,ex(1)-1
|
||||||
|
#if 0
|
||||||
|
!! old code
|
||||||
|
! x direction
|
||||||
|
if(Sfx(i,j,k) >= ZEO .and. i+3 <= imax .and. i-1 >= imin)then
|
||||||
|
! v
|
||||||
|
! D f = ------[ - 3f - 10f + 18f - 6f + f ]
|
||||||
|
! i 12dx i-v i i+v i+2v i+3v
|
||||||
|
f_rhs(i,j,k)=f_rhs(i,j,k)+ &
|
||||||
|
Sfx(i,j,k)*d12dx*(-F3*fh(i-1,j,k)-F10*fh(i,j,k)+F18*fh(i+1,j,k) &
|
||||||
|
-F6*fh(i+2,j,k)+ fh(i+3,j,k))
|
||||||
|
|
||||||
|
elseif(Sfx(i,j,k) <= ZEO .and. i-3 >= imin .and. i+1 <= imax)then
|
||||||
|
f_rhs(i,j,k)=f_rhs(i,j,k)- &
|
||||||
|
Sfx(i,j,k)*d12dx*(-F3*fh(i+1,j,k)-F10*fh(i,j,k)+F18*fh(i-1,j,k) &
|
||||||
|
-F6*fh(i-2,j,k)+ fh(i-3,j,k))
|
||||||
|
|
||||||
|
elseif(i+2 <= imax .and. i-2 >= imin)then
|
||||||
|
!
|
||||||
|
! f(i-2) - 8 f(i-1) + 8 f(i+1) - f(i+2)
|
||||||
|
! fx(i) = ---------------------------------------------
|
||||||
|
! 12 dx
|
||||||
|
f_rhs(i,j,k)=f_rhs(i,j,k)+ &
|
||||||
|
Sfx(i,j,k)*d12dx*(fh(i-2,j,k)-EIT*fh(i-1,j,k)+EIT*fh(i+1,j,k)-fh(i+2,j,k))
|
||||||
|
|
||||||
|
elseif(i+1 <= imax .and. i-1 >= imin)then
|
||||||
|
!
|
||||||
|
! - f(i-1) + f(i+1)
|
||||||
|
! fx(i) = --------------------------------
|
||||||
|
! 2 dx
|
||||||
|
f_rhs(i,j,k)=f_rhs(i,j,k) + Sfx(i,j,k)*d2dx*(-fh(i-1,j,k)+fh(i+1,j,k))
|
||||||
|
|
||||||
|
! set imax and imin 0
|
||||||
|
endif
|
||||||
|
|
||||||
|
! y direction
|
||||||
|
if(Sfy(i,j,k) >= ZEO .and. j+3 <= jmax .and. j-1 >= jmin)then
|
||||||
|
! v
|
||||||
|
! D f = ------[ - 3f - 10f + 18f - 6f + f ]
|
||||||
|
! i 12dx i-v i i+v i+2v i+3v
|
||||||
|
f_rhs(i,j,k)=f_rhs(i,j,k)+ &
|
||||||
|
Sfy(i,j,k)*d12dy*(-F3*fh(i,j-1,k)-F10*fh(i,j,k)+F18*fh(i,j+1,k) &
|
||||||
|
-F6*fh(i,j+2,k)+ fh(i,j+3,k))
|
||||||
|
|
||||||
|
elseif(Sfy(i,j,k) <= ZEO .and. j-3 >= jmin .and. j+1 <= jmax)then
|
||||||
|
f_rhs(i,j,k)=f_rhs(i,j,k)- &
|
||||||
|
Sfy(i,j,k)*d12dy*(-F3*fh(i,j+1,k)-F10*fh(i,j,k)+F18*fh(i,j-1,k) &
|
||||||
|
-F6*fh(i,j-2,k)+ fh(i,j-3,k))
|
||||||
|
|
||||||
|
elseif(j+2 <= jmax .and. j-2 >= jmin)then
|
||||||
|
|
||||||
|
f_rhs(i,j,k)=f_rhs(i,j,k)+ &
|
||||||
|
Sfy(i,j,k)*d12dy*(fh(i,j-2,k)-EIT*fh(i,j-1,k)+EIT*fh(i,j+1,k)-fh(i,j+2,k))
|
||||||
|
|
||||||
|
elseif(j+1 <= jmax .and. j-1 >= jmin)then
|
||||||
|
|
||||||
|
f_rhs(i,j,k)=f_rhs(i,j,k) + Sfy(i,j,k)*d2dy*(-fh(i,j-1,k)+fh(i,j+1,k))
|
||||||
|
! set jmin and jmax 0
|
||||||
|
endif
|
||||||
|
!! z direction
|
||||||
|
if(Sfz(i,j,k) >= ZEO .and. k+3 <= kmax .and. k-1 >= kmin)then
|
||||||
|
! v
|
||||||
|
! D f = ------[ - 3f - 10f + 18f - 6f + f ]
|
||||||
|
! i 12dx i-v i i+v i+2v i+3v
|
||||||
|
f_rhs(i,j,k)=f_rhs(i,j,k)+ &
|
||||||
|
Sfz(i,j,k)*d12dz*(-F3*fh(i,j,k-1)-F10*fh(i,j,k)+F18*fh(i,j,k+1) &
|
||||||
|
-F6*fh(i,j,k+2)+ fh(i,j,k+3))
|
||||||
|
|
||||||
|
elseif(Sfz(i,j,k) <= ZEO .and. k-3 >= kmin .and. k+1 <= kmax)then
|
||||||
|
f_rhs(i,j,k)=f_rhs(i,j,k)- &
|
||||||
|
Sfz(i,j,k)*d12dz*(-F3*fh(i,j,k+1)-F10*fh(i,j,k)+F18*fh(i,j,k-1) &
|
||||||
|
-F6*fh(i,j,k-2)+ fh(i,j,k-3))
|
||||||
|
|
||||||
|
elseif(k+2 <= kmax .and. k-2 >= kmin)then
|
||||||
|
|
||||||
|
f_rhs(i,j,k)=f_rhs(i,j,k)+ &
|
||||||
|
Sfz(i,j,k)*d12dz*(fh(i,j,k-2)-EIT*fh(i,j,k-1)+EIT*fh(i,j,k+1)-fh(i,j,k+2))
|
||||||
|
|
||||||
|
elseif(k+1 <= kmax .and. k-1 >= kmin)then
|
||||||
|
|
||||||
|
f_rhs(i,j,k)=f_rhs(i,j,k)+Sfz(i,j,k)*d2dz*(-fh(i,j,k-1)+fh(i,j,k+1))
|
||||||
|
! set kmin and kmax 0
|
||||||
|
endif
|
||||||
|
#else
|
||||||
!! new code, 2012dec27, based on bam
|
!! new code, 2012dec27, based on bam
|
||||||
! x direction
|
! x direction
|
||||||
if(Sfx(i,j,k) > ZEO)then
|
if(Sfx(i,j,k) > ZEO)then
|
||||||
@@ -240,6 +478,7 @@ subroutine lopsided(ex,X,Y,Z,f,f_rhs,Sfx,Sfy,Sfz,Symmetry,SoA)
|
|||||||
! set kmax and kmin 0
|
! set kmax and kmin 0
|
||||||
endif
|
endif
|
||||||
endif
|
endif
|
||||||
|
#endif
|
||||||
enddo
|
enddo
|
||||||
enddo
|
enddo
|
||||||
enddo
|
enddo
|
||||||
@@ -247,3 +486,612 @@ subroutine lopsided(ex,X,Y,Z,f,f_rhs,Sfx,Sfy,Sfz,Symmetry,SoA)
|
|||||||
return
|
return
|
||||||
|
|
||||||
end subroutine lopsided
|
end subroutine lopsided
|
||||||
|
|
||||||
|
!-----------------------------------------------------------------------------
|
||||||
|
! Combined advection (lopsided) + Kreiss-Oliger dissipation (kodis)
|
||||||
|
! Shares the symmetry_bd buffer fh, eliminating one full-grid copy per call.
|
||||||
|
! Mathematically identical to calling lopsided then kodis separately.
|
||||||
|
!-----------------------------------------------------------------------------
|
||||||
|
subroutine lopsided_kodis(ex,X,Y,Z,f,f_rhs,Sfx,Sfy,Sfz,Symmetry,SoA,eps)
|
||||||
|
implicit none
|
||||||
|
|
||||||
|
!~~~~~~> Input parameters:
|
||||||
|
|
||||||
|
integer, intent(in) :: ex(1:3),Symmetry
|
||||||
|
real*8, intent(in) :: X(1:ex(1)),Y(1:ex(2)),Z(1:ex(3))
|
||||||
|
real*8,dimension(ex(1),ex(2),ex(3)),intent(in) :: f,Sfx,Sfy,Sfz
|
||||||
|
|
||||||
|
real*8,dimension(ex(1),ex(2),ex(3)),intent(inout):: f_rhs
|
||||||
|
real*8,dimension(3),intent(in) ::SoA
|
||||||
|
real*8,intent(in) :: eps
|
||||||
|
|
||||||
|
!~~~~~~> local variables:
|
||||||
|
! note index -2,-1,0, so we have 3 extra points
|
||||||
|
real*8,dimension(-2:ex(1),-2:ex(2),-2:ex(3)) :: fh
|
||||||
|
integer :: imin,jmin,kmin,imax,jmax,kmax,i,j,k
|
||||||
|
real*8 :: dX,dY,dZ
|
||||||
|
real*8 :: d12dx,d12dy,d12dz,d2dx,d2dy,d2dz
|
||||||
|
real*8, parameter :: ZEO=0.d0,ONE=1.d0, F3=3.d0
|
||||||
|
real*8, parameter :: TWO=2.d0,F6=6.0d0,F18=1.8d1
|
||||||
|
real*8, parameter :: F12=1.2d1, F10=1.d1,EIT=8.d0
|
||||||
|
integer, parameter :: NO_SYMM = 0, EQ_SYMM = 1, OCTANT = 2
|
||||||
|
! kodis parameters
|
||||||
|
real*8, parameter :: SIX=6.d0,FIT=1.5d1,TWT=2.d1
|
||||||
|
real*8, parameter :: cof=6.4d1 ! 2^6
|
||||||
|
|
||||||
|
dX = X(2)-X(1)
|
||||||
|
dY = Y(2)-Y(1)
|
||||||
|
dZ = Z(2)-Z(1)
|
||||||
|
|
||||||
|
d12dx = ONE/F12/dX
|
||||||
|
d12dy = ONE/F12/dY
|
||||||
|
d12dz = ONE/F12/dZ
|
||||||
|
|
||||||
|
d2dx = ONE/TWO/dX
|
||||||
|
d2dy = ONE/TWO/dY
|
||||||
|
d2dz = ONE/TWO/dZ
|
||||||
|
|
||||||
|
imax = ex(1)
|
||||||
|
jmax = ex(2)
|
||||||
|
kmax = ex(3)
|
||||||
|
|
||||||
|
imin = 1
|
||||||
|
jmin = 1
|
||||||
|
kmin = 1
|
||||||
|
if(Symmetry > NO_SYMM .and. dabs(Z(1)) < dZ) kmin = -2
|
||||||
|
if(Symmetry > EQ_SYMM .and. dabs(X(1)) < dX) imin = -2
|
||||||
|
if(Symmetry > EQ_SYMM .and. dabs(Y(1)) < dY) jmin = -2
|
||||||
|
|
||||||
|
! Single symmetry_bd call shared by both advection and dissipation
|
||||||
|
call symmetry_bd(3,ex,f,fh,SoA)
|
||||||
|
|
||||||
|
! ---- Advection (lopsided) loop ----
|
||||||
|
! upper bound set ex-1 only for efficiency,
|
||||||
|
! the loop body will set ex 0 also
|
||||||
|
do k=1,ex(3)-1
|
||||||
|
do j=1,ex(2)-1
|
||||||
|
do i=1,ex(1)-1
|
||||||
|
! x direction
|
||||||
|
if(Sfx(i,j,k) > ZEO)then
|
||||||
|
if(i+3 <= imax)then
|
||||||
|
f_rhs(i,j,k)=f_rhs(i,j,k)+ &
|
||||||
|
Sfx(i,j,k)*d12dx*(-F3*fh(i-1,j,k)-F10*fh(i,j,k)+F18*fh(i+1,j,k) &
|
||||||
|
-F6*fh(i+2,j,k)+ fh(i+3,j,k))
|
||||||
|
elseif(i+2 <= imax)then
|
||||||
|
f_rhs(i,j,k)=f_rhs(i,j,k)+ &
|
||||||
|
Sfx(i,j,k)*d12dx*(fh(i-2,j,k)-EIT*fh(i-1,j,k)+EIT*fh(i+1,j,k)-fh(i+2,j,k))
|
||||||
|
|
||||||
|
elseif(i+1 <= imax)then
|
||||||
|
f_rhs(i,j,k)=f_rhs(i,j,k)- &
|
||||||
|
Sfx(i,j,k)*d12dx*(-F3*fh(i+1,j,k)-F10*fh(i,j,k)+F18*fh(i-1,j,k) &
|
||||||
|
-F6*fh(i-2,j,k)+ fh(i-3,j,k))
|
||||||
|
endif
|
||||||
|
elseif(Sfx(i,j,k) < ZEO)then
|
||||||
|
if(i-3 >= imin)then
|
||||||
|
f_rhs(i,j,k)=f_rhs(i,j,k)- &
|
||||||
|
Sfx(i,j,k)*d12dx*(-F3*fh(i+1,j,k)-F10*fh(i,j,k)+F18*fh(i-1,j,k) &
|
||||||
|
-F6*fh(i-2,j,k)+ fh(i-3,j,k))
|
||||||
|
elseif(i-2 >= imin)then
|
||||||
|
f_rhs(i,j,k)=f_rhs(i,j,k)+ &
|
||||||
|
Sfx(i,j,k)*d12dx*(fh(i-2,j,k)-EIT*fh(i-1,j,k)+EIT*fh(i+1,j,k)-fh(i+2,j,k))
|
||||||
|
|
||||||
|
elseif(i-1 >= imin)then
|
||||||
|
f_rhs(i,j,k)=f_rhs(i,j,k)+ &
|
||||||
|
Sfx(i,j,k)*d12dx*(-F3*fh(i-1,j,k)-F10*fh(i,j,k)+F18*fh(i+1,j,k) &
|
||||||
|
-F6*fh(i+2,j,k)+ fh(i+3,j,k))
|
||||||
|
endif
|
||||||
|
endif
|
||||||
|
|
||||||
|
! y direction
|
||||||
|
if(Sfy(i,j,k) > ZEO)then
|
||||||
|
if(j+3 <= jmax)then
|
||||||
|
f_rhs(i,j,k)=f_rhs(i,j,k)+ &
|
||||||
|
Sfy(i,j,k)*d12dy*(-F3*fh(i,j-1,k)-F10*fh(i,j,k)+F18*fh(i,j+1,k) &
|
||||||
|
-F6*fh(i,j+2,k)+ fh(i,j+3,k))
|
||||||
|
elseif(j+2 <= jmax)then
|
||||||
|
f_rhs(i,j,k)=f_rhs(i,j,k)+ &
|
||||||
|
Sfy(i,j,k)*d12dy*(fh(i,j-2,k)-EIT*fh(i,j-1,k)+EIT*fh(i,j+1,k)-fh(i,j+2,k))
|
||||||
|
|
||||||
|
elseif(j+1 <= jmax)then
|
||||||
|
f_rhs(i,j,k)=f_rhs(i,j,k)- &
|
||||||
|
Sfy(i,j,k)*d12dy*(-F3*fh(i,j+1,k)-F10*fh(i,j,k)+F18*fh(i,j-1,k) &
|
||||||
|
-F6*fh(i,j-2,k)+ fh(i,j-3,k))
|
||||||
|
endif
|
||||||
|
elseif(Sfy(i,j,k) < ZEO)then
|
||||||
|
if(j-3 >= jmin)then
|
||||||
|
f_rhs(i,j,k)=f_rhs(i,j,k)- &
|
||||||
|
Sfy(i,j,k)*d12dy*(-F3*fh(i,j+1,k)-F10*fh(i,j,k)+F18*fh(i,j-1,k) &
|
||||||
|
-F6*fh(i,j-2,k)+ fh(i,j-3,k))
|
||||||
|
elseif(j-2 >= jmin)then
|
||||||
|
f_rhs(i,j,k)=f_rhs(i,j,k)+ &
|
||||||
|
Sfy(i,j,k)*d12dy*(fh(i,j-2,k)-EIT*fh(i,j-1,k)+EIT*fh(i,j+1,k)-fh(i,j+2,k))
|
||||||
|
|
||||||
|
elseif(j-1 >= jmin)then
|
||||||
|
f_rhs(i,j,k)=f_rhs(i,j,k)+ &
|
||||||
|
Sfy(i,j,k)*d12dy*(-F3*fh(i,j-1,k)-F10*fh(i,j,k)+F18*fh(i,j+1,k) &
|
||||||
|
-F6*fh(i,j+2,k)+ fh(i,j+3,k))
|
||||||
|
endif
|
||||||
|
endif
|
||||||
|
|
||||||
|
! z direction
|
||||||
|
if(Sfz(i,j,k) > ZEO)then
|
||||||
|
if(k+3 <= kmax)then
|
||||||
|
f_rhs(i,j,k)=f_rhs(i,j,k)+ &
|
||||||
|
Sfz(i,j,k)*d12dz*(-F3*fh(i,j,k-1)-F10*fh(i,j,k)+F18*fh(i,j,k+1) &
|
||||||
|
-F6*fh(i,j,k+2)+ fh(i,j,k+3))
|
||||||
|
elseif(k+2 <= kmax)then
|
||||||
|
f_rhs(i,j,k)=f_rhs(i,j,k)+ &
|
||||||
|
Sfz(i,j,k)*d12dz*(fh(i,j,k-2)-EIT*fh(i,j,k-1)+EIT*fh(i,j,k+1)-fh(i,j,k+2))
|
||||||
|
|
||||||
|
elseif(k+1 <= kmax)then
|
||||||
|
f_rhs(i,j,k)=f_rhs(i,j,k)- &
|
||||||
|
Sfz(i,j,k)*d12dz*(-F3*fh(i,j,k+1)-F10*fh(i,j,k)+F18*fh(i,j,k-1) &
|
||||||
|
-F6*fh(i,j,k-2)+ fh(i,j,k-3))
|
||||||
|
endif
|
||||||
|
elseif(Sfz(i,j,k) < ZEO)then
|
||||||
|
if(k-3 >= kmin)then
|
||||||
|
f_rhs(i,j,k)=f_rhs(i,j,k)- &
|
||||||
|
Sfz(i,j,k)*d12dz*(-F3*fh(i,j,k+1)-F10*fh(i,j,k)+F18*fh(i,j,k-1) &
|
||||||
|
-F6*fh(i,j,k-2)+ fh(i,j,k-3))
|
||||||
|
elseif(k-2 >= kmin)then
|
||||||
|
f_rhs(i,j,k)=f_rhs(i,j,k)+ &
|
||||||
|
Sfz(i,j,k)*d12dz*(fh(i,j,k-2)-EIT*fh(i,j,k-1)+EIT*fh(i,j,k+1)-fh(i,j,k+2))
|
||||||
|
|
||||||
|
elseif(k-1 >= kmin)then
|
||||||
|
f_rhs(i,j,k)=f_rhs(i,j,k)+ &
|
||||||
|
Sfz(i,j,k)*d12dz*(-F3*fh(i,j,k-1)-F10*fh(i,j,k)+F18*fh(i,j,k+1) &
|
||||||
|
-F6*fh(i,j,k+2)+ fh(i,j,k+3))
|
||||||
|
endif
|
||||||
|
endif
|
||||||
|
enddo
|
||||||
|
enddo
|
||||||
|
enddo
|
||||||
|
|
||||||
|
! ---- Dissipation (kodis) loop ----
|
||||||
|
if(eps > ZEO) then
|
||||||
|
do k=1,ex(3)
|
||||||
|
do j=1,ex(2)
|
||||||
|
do i=1,ex(1)
|
||||||
|
|
||||||
|
if(i-3 >= imin .and. i+3 <= imax .and. &
|
||||||
|
j-3 >= jmin .and. j+3 <= jmax .and. &
|
||||||
|
k-3 >= kmin .and. k+3 <= kmax) then
|
||||||
|
f_rhs(i,j,k) = f_rhs(i,j,k) + eps/cof *( ( &
|
||||||
|
(fh(i-3,j,k)+fh(i+3,j,k)) - &
|
||||||
|
SIX*(fh(i-2,j,k)+fh(i+2,j,k)) + &
|
||||||
|
FIT*(fh(i-1,j,k)+fh(i+1,j,k)) - &
|
||||||
|
TWT* fh(i,j,k) )/dX + &
|
||||||
|
( &
|
||||||
|
(fh(i,j-3,k)+fh(i,j+3,k)) - &
|
||||||
|
SIX*(fh(i,j-2,k)+fh(i,j+2,k)) + &
|
||||||
|
FIT*(fh(i,j-1,k)+fh(i,j+1,k)) - &
|
||||||
|
TWT* fh(i,j,k) )/dY + &
|
||||||
|
( &
|
||||||
|
(fh(i,j,k-3)+fh(i,j,k+3)) - &
|
||||||
|
SIX*(fh(i,j,k-2)+fh(i,j,k+2)) + &
|
||||||
|
FIT*(fh(i,j,k-1)+fh(i,j,k+1)) - &
|
||||||
|
TWT* fh(i,j,k) )/dZ )
|
||||||
|
endif
|
||||||
|
|
||||||
|
enddo
|
||||||
|
enddo
|
||||||
|
enddo
|
||||||
|
endif
|
||||||
|
|
||||||
|
return
|
||||||
|
|
||||||
|
end subroutine lopsided_kodis
|
||||||
|
|
||||||
|
#elif (ghost_width == 4)
|
||||||
|
! sixth order code
|
||||||
|
! Compute advection terms in right hand sides of field equations
|
||||||
|
! v
|
||||||
|
! D f = ------[ 2f - 24f - 35f + 80f - 30f + 8f - f ]
|
||||||
|
! i 60dx i-2v i-v i i+v i+2v i+3v i+4v
|
||||||
|
!
|
||||||
|
! where
|
||||||
|
!
|
||||||
|
! i
|
||||||
|
! |B |
|
||||||
|
! v = -----
|
||||||
|
! i
|
||||||
|
! B
|
||||||
|
!
|
||||||
|
!-----------------------------------------------------------------------------
|
||||||
|
subroutine lopsided(ex,X,Y,Z,f,f_rhs,Sfx,Sfy,Sfz,Symmetry,SoA)
|
||||||
|
implicit none
|
||||||
|
|
||||||
|
!~~~~~~> Input parameters:
|
||||||
|
|
||||||
|
integer, intent(in) :: ex(1:3),Symmetry
|
||||||
|
real*8, intent(in) :: X(1:ex(1)),Y(1:ex(2)),Z(1:ex(3))
|
||||||
|
real*8,dimension(ex(1),ex(2),ex(3)),intent(in) :: f,Sfx,Sfy,Sfz
|
||||||
|
|
||||||
|
real*8,dimension(ex(1),ex(2),ex(3)),intent(inout):: f_rhs
|
||||||
|
real*8,dimension(3),intent(in) ::SoA
|
||||||
|
|
||||||
|
!~~~~~~> local variables:
|
||||||
|
|
||||||
|
real*8,dimension(-3:ex(1),-3:ex(2),-3:ex(3)) :: fh
|
||||||
|
integer :: imin,jmin,kmin,imax,jmax,kmax,i,j,k
|
||||||
|
real*8 :: dX,dY,dZ
|
||||||
|
real*8 :: d60dx,d60dy,d60dz,d12dx,d12dy,d12dz,d2dx,d2dy,d2dz
|
||||||
|
real*8, parameter :: ZEO=0.d0,ONE=1.d0, F60=6.d1
|
||||||
|
real*8, parameter :: TWO=2.d0,F24=2.4d1,F35=3.5d1,F80=8.d1,F30=3.d1,EIT=8.d0
|
||||||
|
real*8, parameter :: F9=9.d0,F45=4.5d1,F12=1.2d1
|
||||||
|
real*8, parameter :: F10=1.d1,F77=7.7d1,F150=1.5d2,F100=1.d2,F50=5.d1,F15=1.5d1
|
||||||
|
integer, parameter :: NO_SYMM = 0, EQ_SYMM = 1, OCTANT = 2
|
||||||
|
|
||||||
|
dX = X(2)-X(1)
|
||||||
|
dY = Y(2)-Y(1)
|
||||||
|
dZ = Z(2)-Z(1)
|
||||||
|
|
||||||
|
d60dx = ONE/F60/dX
|
||||||
|
d60dy = ONE/F60/dY
|
||||||
|
d60dz = ONE/F60/dZ
|
||||||
|
|
||||||
|
d12dx = ONE/F12/dX
|
||||||
|
d12dy = ONE/F12/dY
|
||||||
|
d12dz = ONE/F12/dZ
|
||||||
|
|
||||||
|
d2dx = ONE/TWO/dX
|
||||||
|
d2dy = ONE/TWO/dY
|
||||||
|
d2dz = ONE/TWO/dZ
|
||||||
|
|
||||||
|
imax = ex(1)
|
||||||
|
jmax = ex(2)
|
||||||
|
kmax = ex(3)
|
||||||
|
|
||||||
|
imin = 1
|
||||||
|
jmin = 1
|
||||||
|
kmin = 1
|
||||||
|
if(Symmetry > NO_SYMM .and. dabs(Z(1)) < dZ) kmin = -3
|
||||||
|
if(Symmetry > EQ_SYMM .and. dabs(X(1)) < dX) imin = -3
|
||||||
|
if(Symmetry > EQ_SYMM .and. dabs(Y(1)) < dY) jmin = -3
|
||||||
|
|
||||||
|
call symmetry_bd(4,ex,f,fh,SoA)
|
||||||
|
|
||||||
|
! upper bound set ex-1 only for efficiency,
|
||||||
|
! the loop body will set ex 0 also
|
||||||
|
do k=1,ex(3)-1
|
||||||
|
do j=1,ex(2)-1
|
||||||
|
do i=1,ex(1)-1
|
||||||
|
! x direction
|
||||||
|
if(Sfx(i,j,k) >= ZEO .and. i+4 <= imax .and. i-2 >= imin)then
|
||||||
|
! v
|
||||||
|
! D f = ------[ 2f - 24f - 35f + 80f - 30f + 8f - f ]
|
||||||
|
! i 60dx i-2v i-v i i+v i+2v i+3v i+4v
|
||||||
|
f_rhs(i,j,k)=f_rhs(i,j,k)+ &
|
||||||
|
Sfx(i,j,k)*d60dx*(TWO*fh(i-2,j,k)-F24*fh(i-1,j,k)-F35*fh(i,j,k)+F80*fh(i+1,j,k) &
|
||||||
|
-F30*fh(i+2,j,k)+EIT*fh(i+3,j,k)- fh(i+4,j,k))
|
||||||
|
elseif(Sfx(i,j,k) >= ZEO .and. i+5 <= imax .and. i-1 >= imin)then
|
||||||
|
! v
|
||||||
|
! D f = ------[-10f - 77f + 150f - 100f + 50f -15f + 2f ]
|
||||||
|
! i 60dx i-v i i+v i+2v i+3v i+4v i+5v
|
||||||
|
f_rhs(i,j,k)=f_rhs(i,j,k)+ &
|
||||||
|
Sfx(i,j,k)*d60dx*(-F10*fh(i-1,j,k)-F77*fh(i ,j,k)+F150*fh(i+1,j,k)-F100*fh(i+2,j,k) &
|
||||||
|
+F50*fh(i+3,j,k)-F15*fh(i+4,j,k)+ TWO*fh(i+5,j,k))
|
||||||
|
|
||||||
|
elseif(Sfx(i,j,k) <= ZEO .and. i-4 >= imin .and. i+2 <= imax)then
|
||||||
|
f_rhs(i,j,k)=f_rhs(i,j,k)- &
|
||||||
|
Sfx(i,j,k)*d60dx*(TWO*fh(i+2,j,k)-F24*fh(i+1,j,k)-F35*fh(i,j,k)+F80*fh(i-1,j,k) &
|
||||||
|
-F30*fh(i-2,j,k)+EIT*fh(i-3,j,k)- fh(i-4,j,k))
|
||||||
|
elseif(Sfx(i,j,k) <= ZEO .and. i-5 >= imin .and. i+1 <= imax)then
|
||||||
|
f_rhs(i,j,k)=f_rhs(i,j,k)- &
|
||||||
|
Sfx(i,j,k)*d60dx*(-F10*fh(i+1,j,k)-F77*fh(i ,j,k)+F150*fh(i-1,j,k)-F100*fh(i-2,j,k) &
|
||||||
|
+F50*fh(i-3,j,k)-F15*fh(i-4,j,k)+ TWO*fh(i-5,j,k))
|
||||||
|
|
||||||
|
elseif(i+3 <= imax .and. i-3 >= imin)then
|
||||||
|
! - f(i-3) + 9 f(i-2) - 45 f(i-1) + 45 f(i+1) - 9 f(i+2) + f(i+3)
|
||||||
|
! fx(i) = -----------------------------------------------------------------
|
||||||
|
! 60 dx
|
||||||
|
f_rhs(i,j,k)=f_rhs(i,j,k)+ &
|
||||||
|
Sfx(i,j,k)*d60dx*(-fh(i-3,j,k)+F9*fh(i-2,j,k)-F45*fh(i-1,j,k)+F45*fh(i+1,j,k)-F9*fh(i+2,j,k)+fh(i+3,j,k))
|
||||||
|
|
||||||
|
elseif(i+2 <= imax .and. i-2 >= imin)then
|
||||||
|
!
|
||||||
|
! f(i-2) - 8 f(i-1) + 8 f(i+1) - f(i+2)
|
||||||
|
! fx(i) = ---------------------------------------------
|
||||||
|
! 12 dx
|
||||||
|
f_rhs(i,j,k)=f_rhs(i,j,k)+ &
|
||||||
|
Sfx(i,j,k)*d12dx*(fh(i-2,j,k)-EIT*fh(i-1,j,k)+EIT*fh(i+1,j,k)-fh(i+2,j,k))
|
||||||
|
|
||||||
|
elseif(i+1 <= imax .and. i-1 >= imin)then
|
||||||
|
!
|
||||||
|
! - f(i-1) + f(i+1)
|
||||||
|
! fx(i) = --------------------------------
|
||||||
|
! 2 dx
|
||||||
|
f_rhs(i,j,k)=f_rhs(i,j,k) + Sfx(i,j,k)*d2dx*(-fh(i-1,j,k)+fh(i+1,j,k))
|
||||||
|
|
||||||
|
! set imax and imin 0
|
||||||
|
endif
|
||||||
|
|
||||||
|
! y direction
|
||||||
|
if(Sfy(i,j,k) >= ZEO .and. j+4 <= jmax .and. j-2 >= jmin)then
|
||||||
|
|
||||||
|
f_rhs(i,j,k)=f_rhs(i,j,k)+ &
|
||||||
|
Sfy(i,j,k)*d60dy*(TWO*fh(i,j-2,k)-F24*fh(i,j-1,k)-F35*fh(i,j,k)+F80*fh(i,j+1,k) &
|
||||||
|
-F30*fh(i,j+2,k)+EIT*fh(i,j+3,k)- fh(i,j+4,k))
|
||||||
|
elseif(Sfy(i,j,k) >= ZEO .and. j+5 <= jmax .and. j-1 >= jmin)then
|
||||||
|
f_rhs(i,j,k)=f_rhs(i,j,k)+ &
|
||||||
|
Sfy(i,j,k)*d60dy*(-F10*fh(i,j-1,k)-F77*fh(i,j ,k)+F150*fh(i,j+1,k)-F100*fh(i,j+2,k) &
|
||||||
|
+F50*fh(i,j+3,k)-F15*fh(i,j+4,k)+ TWO*fh(i,j+5,k))
|
||||||
|
|
||||||
|
elseif(Sfy(i,j,k) <= ZEO .and. j-4 >= jmin .and. j+2 <= jmax)then
|
||||||
|
|
||||||
|
f_rhs(i,j,k)=f_rhs(i,j,k)- &
|
||||||
|
Sfy(i,j,k)*d60dy*(TWO*fh(i,j+2,k)-F24*fh(i,j+1,k)-F35*fh(i,j,k)+F80*fh(i,j-1,k) &
|
||||||
|
-F30*fh(i,j-2,k)+EIT*fh(i,j-3,k)- fh(i,j-4,k))
|
||||||
|
|
||||||
|
elseif(Sfy(i,j,k) <= ZEO .and. j-5 >= jmin .and. j+1 <= jmax)then
|
||||||
|
|
||||||
|
f_rhs(i,j,k)=f_rhs(i,j,k)- &
|
||||||
|
Sfy(i,j,k)*d60dy*(-F10*fh(i,j+1,k)-F77*fh(i,j ,k)+F150*fh(i,j-1,k)-F100*fh(i,j-2,k) &
|
||||||
|
+F50*fh(i,j-3,k)-F15*fh(i,j-4,k)+ TWO*fh(i,j-5,k))
|
||||||
|
|
||||||
|
elseif(j+3 <= jmax .and. j-3 >= jmin)then
|
||||||
|
|
||||||
|
f_rhs(i,j,k)=f_rhs(i,j,k)+ &
|
||||||
|
Sfy(i,j,k)*d60dy*(-fh(i,j-3,k)+F9*fh(i,j-2,k)-F45*fh(i,j-1,k)+F45*fh(i,j+1,k)-F9*fh(i,j+2,k)+fh(i,j+3,k))
|
||||||
|
|
||||||
|
elseif(j+2 <= jmax .and. j-2 >= jmin)then
|
||||||
|
|
||||||
|
f_rhs(i,j,k)=f_rhs(i,j,k)+ &
|
||||||
|
Sfy(i,j,k)*d12dy*(fh(i,j-2,k)-EIT*fh(i,j-1,k)+EIT*fh(i,j+1,k)-fh(i,j+2,k))
|
||||||
|
|
||||||
|
elseif(j+1 <= jmax .and. j-1 >= jmin)then
|
||||||
|
|
||||||
|
f_rhs(i,j,k)=f_rhs(i,j,k) + Sfy(i,j,k)*d2dy*(-fh(i,j-1,k)+fh(i,j+1,k))
|
||||||
|
! set jmin and jmax 0
|
||||||
|
endif
|
||||||
|
!! z direction
|
||||||
|
if(Sfz(i,j,k) >= ZEO .and. k+4 <= kmax .and. k-2 >= kmin)then
|
||||||
|
|
||||||
|
f_rhs(i,j,k)=f_rhs(i,j,k)+ &
|
||||||
|
Sfz(i,j,k)*d60dz*(TWO*fh(i,j,k-2)-F24*fh(i,j,k-1)-F35*fh(i,j,k)+F80*fh(i,j,k+1) &
|
||||||
|
-F30*fh(i,j,k+2)+EIT*fh(i,j,k+3)- fh(i,j,k+4))
|
||||||
|
elseif(Sfz(i,j,k) >= ZEO .and. k+5 <= kmax .and. k-1 >= kmin)then
|
||||||
|
f_rhs(i,j,k)=f_rhs(i,j,k)+ &
|
||||||
|
Sfz(i,j,k)*d60dz*(-F10*fh(i,j,k-1)-F77*fh(i,j,k )+F150*fh(i,j,k+1)-F100*fh(i,j,k+2) &
|
||||||
|
+F50*fh(i,j,k+3)-F15*fh(i,j,k+4)+ TWO*fh(i,j,k+5))
|
||||||
|
|
||||||
|
elseif(Sfz(i,j,k) <= ZEO .and. k-4 >= kmin .and. k+2 <= kmax)then
|
||||||
|
|
||||||
|
f_rhs(i,j,k)=f_rhs(i,j,k)- &
|
||||||
|
Sfz(i,j,k)*d60dz*(TWO*fh(i,j,k+2)-F24*fh(i,j,k+1)-F35*fh(i,j,k)+F80*fh(i,j,k-1) &
|
||||||
|
-F30*fh(i,j,k-2)+EIT*fh(i,j,k-3)- fh(i,j,k-4))
|
||||||
|
|
||||||
|
elseif(Sfz(i,j,k) <= ZEO .and. k-5 >= kmin .and. k+1 <= kmax)then
|
||||||
|
|
||||||
|
f_rhs(i,j,k)=f_rhs(i,j,k)- &
|
||||||
|
Sfz(i,j,k)*d60dz*(-F10*fh(i,j,k+1)-F77*fh(i,j,k )+F150*fh(i,j,k-1)-F100*fh(i,j,k-2) &
|
||||||
|
+F50*fh(i,j,k-3)-F15*fh(i,j,k-4)+ TWO*fh(i,j,k-5))
|
||||||
|
|
||||||
|
elseif(k+3 <= kmax .and. k-3 >= kmin)then
|
||||||
|
|
||||||
|
f_rhs(i,j,k)=f_rhs(i,j,k)+ &
|
||||||
|
Sfz(i,j,k)*d60dz*(-fh(i,j,k-3)+F9*fh(i,j,k-2)-F45*fh(i,j,k-1)+F45*fh(i,j,k+1)-F9*fh(i,j,k+2)+fh(i,j,k+3))
|
||||||
|
|
||||||
|
elseif(k+2 <= kmax .and. k-2 >= kmin)then
|
||||||
|
|
||||||
|
f_rhs(i,j,k)=f_rhs(i,j,k)+ &
|
||||||
|
Sfz(i,j,k)*d12dz*(fh(i,j,k-2)-EIT*fh(i,j,k-1)+EIT*fh(i,j,k+1)-fh(i,j,k+2))
|
||||||
|
|
||||||
|
elseif(k+1 <= kmax .and. k-1 >= kmin)then
|
||||||
|
|
||||||
|
f_rhs(i,j,k)=f_rhs(i,j,k)+Sfz(i,j,k)*d2dz*(-fh(i,j,k-1)+fh(i,j,k+1))
|
||||||
|
! set kmin and kmax 0
|
||||||
|
endif
|
||||||
|
|
||||||
|
enddo
|
||||||
|
enddo
|
||||||
|
enddo
|
||||||
|
|
||||||
|
return
|
||||||
|
|
||||||
|
end subroutine lopsided
|
||||||
|
|
||||||
|
#elif (ghost_width == 5)
|
||||||
|
! eighth order code
|
||||||
|
!-----------------------------------------------------------------------------
|
||||||
|
! PRD 77, 024034 (2008)
|
||||||
|
! Compute advection terms in right hand sides of field equations
|
||||||
|
! v [ - 5 f(i-3v) + 60 f(i-2v) - 420 f(i-v) - 378 f(i) + 1050 f(i+v) - 420 f(i+2v) + 140 f(i+3v) - 30 f(i+4v) + 3 f(i+5v)]
|
||||||
|
! D f = --------------------------------------------------------------------------------------------------------------------------
|
||||||
|
! i 840 dx
|
||||||
|
!
|
||||||
|
! where
|
||||||
|
!
|
||||||
|
! i
|
||||||
|
! |B |
|
||||||
|
! v = -----
|
||||||
|
! i
|
||||||
|
! B
|
||||||
|
!
|
||||||
|
!-----------------------------------------------------------------------------
|
||||||
|
subroutine lopsided(ex,X,Y,Z,f,f_rhs,Sfx,Sfy,Sfz,Symmetry,SoA)
|
||||||
|
implicit none
|
||||||
|
|
||||||
|
!~~~~~~> Input parameters:
|
||||||
|
|
||||||
|
integer, intent(in) :: ex(1:3),Symmetry
|
||||||
|
real*8, intent(in) :: X(1:ex(1)),Y(1:ex(2)),Z(1:ex(3))
|
||||||
|
real*8,dimension(ex(1),ex(2),ex(3)),intent(in) :: f,Sfx,Sfy,Sfz
|
||||||
|
|
||||||
|
real*8,dimension(ex(1),ex(2),ex(3)),intent(inout):: f_rhs
|
||||||
|
real*8,dimension(3),intent(in) ::SoA
|
||||||
|
|
||||||
|
!~~~~~~> local variables:
|
||||||
|
|
||||||
|
real*8,dimension(-4:ex(1),-4:ex(2),-4:ex(3)) :: fh
|
||||||
|
integer :: imin,jmin,kmin,imax,jmax,kmax,i,j,k
|
||||||
|
real*8 :: dX,dY,dZ
|
||||||
|
real*8 :: d840dx,d840dy,d840dz,d60dx,d60dy,d60dz,d12dx,d12dy,d12dz,d2dx,d2dy,d2dz
|
||||||
|
real*8, parameter :: ZEO=0.d0,ONE=1.d0, F60=6.d1
|
||||||
|
real*8, parameter :: TWO=2.d0,F30=3.d1,EIT=8.d0
|
||||||
|
real*8, parameter :: F9=9.d0,F45=4.5d1,F12=1.2d1,F140=1.4d2,THR=3.d0
|
||||||
|
real*8, parameter :: F840=8.4d2,F5=5.d0,F420=4.2d2,F378=3.78d2,F1050=1.05d3
|
||||||
|
real*8, parameter :: F32=3.2d1,F168=1.68d2,F672=6.72d2
|
||||||
|
integer, parameter :: NO_SYMM = 0, EQ_SYMM = 1, OCTANT = 2
|
||||||
|
|
||||||
|
dX = X(2)-X(1)
|
||||||
|
dY = Y(2)-Y(1)
|
||||||
|
dZ = Z(2)-Z(1)
|
||||||
|
|
||||||
|
d840dx = ONE/F840/dX
|
||||||
|
d840dy = ONE/F840/dY
|
||||||
|
d840dz = ONE/F840/dZ
|
||||||
|
|
||||||
|
d60dx = ONE/F60/dX
|
||||||
|
d60dy = ONE/F60/dY
|
||||||
|
d60dz = ONE/F60/dZ
|
||||||
|
|
||||||
|
d12dx = ONE/F12/dX
|
||||||
|
d12dy = ONE/F12/dY
|
||||||
|
d12dz = ONE/F12/dZ
|
||||||
|
|
||||||
|
d2dx = ONE/TWO/dX
|
||||||
|
d2dy = ONE/TWO/dY
|
||||||
|
d2dz = ONE/TWO/dZ
|
||||||
|
|
||||||
|
imax = ex(1)
|
||||||
|
jmax = ex(2)
|
||||||
|
kmax = ex(3)
|
||||||
|
|
||||||
|
imin = 1
|
||||||
|
jmin = 1
|
||||||
|
kmin = 1
|
||||||
|
if(Symmetry > NO_SYMM .and. dabs(Z(1)) < dZ) kmin = -4
|
||||||
|
if(Symmetry > EQ_SYMM .and. dabs(X(1)) < dX) imin = -4
|
||||||
|
if(Symmetry > EQ_SYMM .and. dabs(Y(1)) < dY) jmin = -4
|
||||||
|
|
||||||
|
call symmetry_bd(5,ex,f,fh,SoA)
|
||||||
|
|
||||||
|
! upper bound set ex-1 only for efficiency,
|
||||||
|
! the loop body will set ex 0 also
|
||||||
|
do k=1,ex(3)-1
|
||||||
|
do j=1,ex(2)-1
|
||||||
|
do i=1,ex(1)-1
|
||||||
|
! x direction
|
||||||
|
if(Sfx(i,j,k) >= ZEO .and. i+5 <= imax .and. i-3 >= imin)then
|
||||||
|
! v [ - 5 f(i-3v) + 60 f(i-2v) - 420 f(i-v) - 378 f(i) + 1050 f(i+v) - 420 f(i+2v) + 140 f(i+3v) - 30 f(i+4v) + 3 f(i+5v)]
|
||||||
|
! D f = --------------------------------------------------------------------------------------------------------------------------
|
||||||
|
! i 840 dx
|
||||||
|
f_rhs(i,j,k)=f_rhs(i,j,k)+ &
|
||||||
|
Sfx(i,j,k)*d840dx*(-F5*fh(i-3,j,k)+F60 *fh(i-2,j,k)-F420*fh(i-1,j,k)-F378*fh(i ,j,k) &
|
||||||
|
+F1050*fh(i+1,j,k)-F420*fh(i+2,j,k)+F140*fh(i+3,j,k)-F30 *fh(i+4,j,k)+THR*fh(i+5,j,k))
|
||||||
|
|
||||||
|
elseif(Sfx(i,j,k) <= ZEO .and. i-5 >= imin .and. i+3 <= imax)then
|
||||||
|
f_rhs(i,j,k)=f_rhs(i,j,k)- &
|
||||||
|
Sfx(i,j,k)*d840dx*(-F5*fh(i+3,j,k)+F60 *fh(i+2,j,k)-F420*fh(i+1,j,k)-F378*fh(i ,j,k) &
|
||||||
|
+F1050*fh(i-1,j,k)-F420*fh(i-2,j,k)+F140*fh(i-3,j,k)- F30*fh(i-4,j,k)+THR*fh(i-5,j,k))
|
||||||
|
|
||||||
|
elseif(i+4 <= imax .and. i-4 >= imin)then
|
||||||
|
! 3 f(i-4) - 32 f(i-3) + 168 f(i-2) - 672 f(i-1) + 672 f(i+1) - 168 f(i+2) + 32 f(i+3) - 3 f(i+4)
|
||||||
|
! fx(i) = -------------------------------------------------------------------------------------------------
|
||||||
|
! 840 dx
|
||||||
|
f_rhs(i,j,k)=f_rhs(i,j,k)+ &
|
||||||
|
Sfx(i,j,k)*d840dx*( THR*fh(i-4,j,k)-F32 *fh(i-3,j,k)+F168*fh(i-2,j,k)-F672*fh(i-1,j,k)+ &
|
||||||
|
F672*fh(i+1,j,k)-F168*fh(i+2,j,k)+F32 *fh(i+3,j,k)-THR *fh(i+4,j,k))
|
||||||
|
|
||||||
|
elseif(i+3 <= imax .and. i-3 >= imin)then
|
||||||
|
! - f(i-3) + 9 f(i-2) - 45 f(i-1) + 45 f(i+1) - 9 f(i+2) + f(i+3)
|
||||||
|
! fx(i) = -----------------------------------------------------------------
|
||||||
|
! 60 dx
|
||||||
|
f_rhs(i,j,k)=f_rhs(i,j,k)+ &
|
||||||
|
Sfx(i,j,k)*d60dx*(-fh(i-3,j,k)+F9*fh(i-2,j,k)-F45*fh(i-1,j,k)+F45*fh(i+1,j,k)-F9*fh(i+2,j,k)+fh(i+3,j,k))
|
||||||
|
|
||||||
|
elseif(i+2 <= imax .and. i-2 >= imin)then
|
||||||
|
!
|
||||||
|
! f(i-2) - 8 f(i-1) + 8 f(i+1) - f(i+2)
|
||||||
|
! fx(i) = ---------------------------------------------
|
||||||
|
! 12 dx
|
||||||
|
f_rhs(i,j,k)=f_rhs(i,j,k)+ &
|
||||||
|
Sfx(i,j,k)*d12dx*(fh(i-2,j,k)-EIT*fh(i-1,j,k)+EIT*fh(i+1,j,k)-fh(i+2,j,k))
|
||||||
|
|
||||||
|
elseif(i+1 <= imax .and. i-1 >= imin)then
|
||||||
|
!
|
||||||
|
! - f(i-1) + f(i+1)
|
||||||
|
! fx(i) = --------------------------------
|
||||||
|
! 2 dx
|
||||||
|
f_rhs(i,j,k)=f_rhs(i,j,k) + Sfx(i,j,k)*d2dx*(-fh(i-1,j,k)+fh(i+1,j,k))
|
||||||
|
|
||||||
|
! set imax and imin 0
|
||||||
|
endif
|
||||||
|
|
||||||
|
! y direction
|
||||||
|
if(Sfy(i,j,k) >= ZEO .and. j+5 <= jmax .and. j-3 >= jmin)then
|
||||||
|
|
||||||
|
f_rhs(i,j,k)=f_rhs(i,j,k)+ &
|
||||||
|
Sfy(i,j,k)*d840dy*(-F5*fh(i,j-3,k)+F60 *fh(i,j-2,k)-F420*fh(i,j-1,k)-F378*fh(i,j ,k) &
|
||||||
|
+F1050*fh(i,j+1,k)-F420*fh(i,j+2,k)+F140*fh(i,j+3,k)-F30 *fh(i,j+4,k)+THR*fh(i,j+5,k))
|
||||||
|
|
||||||
|
elseif(Sfy(i,j,k) <= ZEO .and. j-5 >= jmin .and. j+3 <= jmax)then
|
||||||
|
f_rhs(i,j,k)=f_rhs(i,j,k)- &
|
||||||
|
Sfy(i,j,k)*d840dy*(-F5*fh(i,j+3,k)+F60 *fh(i,j+2,k)-F420*fh(i,j+1,k)-F378*fh(i,j ,k) &
|
||||||
|
+F1050*fh(i,j-1,k)-F420*fh(i,j-2,k)+F140*fh(i,j-3,k)- F30*fh(i,j-4,k)+THR*fh(i,j-5,k))
|
||||||
|
|
||||||
|
elseif(j+4 <= jmax .and. j-4 >= jmin)then
|
||||||
|
|
||||||
|
f_rhs(i,j,k)=f_rhs(i,j,k)+ &
|
||||||
|
Sfy(i,j,k)*d840dy*( THR*fh(i,j-4,k)-F32 *fh(i,j-3,k)+F168*fh(i,j-2,k)-F672*fh(i,j-1,k)+ &
|
||||||
|
F672*fh(i,j+1,k)-F168*fh(i,j+2,k)+F32 *fh(i,j+3,k)-THR *fh(i,j+4,k))
|
||||||
|
|
||||||
|
elseif(j+3 <= jmax .and. j-3 >= jmin)then
|
||||||
|
|
||||||
|
f_rhs(i,j,k)=f_rhs(i,j,k)+ &
|
||||||
|
Sfy(i,j,k)*d60dy*(-fh(i,j-3,k)+F9*fh(i,j-2,k)-F45*fh(i,j-1,k)+F45*fh(i,j+1,k)-F9*fh(i,j+2,k)+fh(i,j+3,k))
|
||||||
|
|
||||||
|
elseif(j+2 <= jmax .and. j-2 >= jmin)then
|
||||||
|
|
||||||
|
f_rhs(i,j,k)=f_rhs(i,j,k)+ &
|
||||||
|
Sfy(i,j,k)*d12dy*(fh(i,j-2,k)-EIT*fh(i,j-1,k)+EIT*fh(i,j+1,k)-fh(i,j+2,k))
|
||||||
|
|
||||||
|
elseif(j+1 <= jmax .and. j-1 >= jmin)then
|
||||||
|
|
||||||
|
f_rhs(i,j,k)=f_rhs(i,j,k) + Sfy(i,j,k)*d2dy*(-fh(i,j-1,k)+fh(i,j+1,k))
|
||||||
|
! set jmin and jmax 0
|
||||||
|
endif
|
||||||
|
!! z direction
|
||||||
|
if(Sfz(i,j,k) >= ZEO .and. k+5 <= kmax .and. k-3 >= kmin)then
|
||||||
|
|
||||||
|
f_rhs(i,j,k)=f_rhs(i,j,k)+ &
|
||||||
|
Sfz(i,j,k)*d840dz*(-F5*fh(i,j,k-3)+F60 *fh(i,j,k-2)-F420*fh(i,j,k-1)-F378*fh(i,j,k ) &
|
||||||
|
+F1050*fh(i,j,k+1)-F420*fh(i,j,k+2)+F140*fh(i,j,k+3)-F30 *fh(i,j,k+4)+THR*fh(i,j,k+5))
|
||||||
|
|
||||||
|
elseif(Sfz(i,j,k) <= ZEO .and. k-5 >= kmin .and. k+3 <= kmax)then
|
||||||
|
f_rhs(i,j,k)=f_rhs(i,j,k)- &
|
||||||
|
Sfz(i,j,k)*d840dz*(-F5*fh(i,j,k+3)+F60 *fh(i,j,k+2)-F420*fh(i,j,k+1)-F378*fh(i,j,k ) &
|
||||||
|
+F1050*fh(i,j,k-1)-F420*fh(i,j,k-2)+F140*fh(i,j,k-3)- F30*fh(i,j,k-4)+THR*fh(i,j,k-5))
|
||||||
|
|
||||||
|
elseif(k+4 <= kmax .and. k-4 >= kmin)then
|
||||||
|
|
||||||
|
f_rhs(i,j,k)=f_rhs(i,j,k)+ &
|
||||||
|
Sfz(i,j,k)*d840dz*( THR*fh(i,j,k-4)-F32 *fh(i,j,k-3)+F168*fh(i,j,k-2)-F672*fh(i,j,k-1)+ &
|
||||||
|
F672*fh(i,j,k+1)-F168*fh(i,j,k+2)+F32 *fh(i,j,k+3)-THR *fh(i,j,k+4))
|
||||||
|
|
||||||
|
elseif(k+3 <= kmax .and. k-3 >= kmin)then
|
||||||
|
|
||||||
|
f_rhs(i,j,k)=f_rhs(i,j,k)+ &
|
||||||
|
Sfz(i,j,k)*d60dz*(-fh(i,j,k-3)+F9*fh(i,j,k-2)-F45*fh(i,j,k-1)+F45*fh(i,j,k+1)-F9*fh(i,j,k+2)+fh(i,j,k+3))
|
||||||
|
|
||||||
|
elseif(k+2 <= kmax .and. k-2 >= kmin)then
|
||||||
|
|
||||||
|
f_rhs(i,j,k)=f_rhs(i,j,k)+ &
|
||||||
|
Sfz(i,j,k)*d12dz*(fh(i,j,k-2)-EIT*fh(i,j,k-1)+EIT*fh(i,j,k+1)-fh(i,j,k+2))
|
||||||
|
|
||||||
|
elseif(k+1 <= kmax .and. k-1 >= kmin)then
|
||||||
|
|
||||||
|
f_rhs(i,j,k)=f_rhs(i,j,k)+Sfz(i,j,k)*d2dz*(-fh(i,j,k-1)+fh(i,j,k+1))
|
||||||
|
! set kmin and kmax 0
|
||||||
|
endif
|
||||||
|
|
||||||
|
enddo
|
||||||
|
enddo
|
||||||
|
enddo
|
||||||
|
|
||||||
|
return
|
||||||
|
|
||||||
|
end subroutine lopsided
|
||||||
|
|
||||||
|
#endif
|
||||||
|
|||||||
@@ -10,14 +10,15 @@ filein = -I/usr/include/ -I${MKLROOT}/include
|
|||||||
## Added -lifcore for Intel Fortran runtime and -limf for Intel math library
|
## Added -lifcore for Intel Fortran runtime and -limf for Intel math library
|
||||||
LDLIBS = -L${MKLROOT}/lib -lmkl_intel_lp64 -lmkl_sequential -lmkl_core -lifcore -limf -lpthread -lm -ldl
|
LDLIBS = -L${MKLROOT}/lib -lmkl_intel_lp64 -lmkl_sequential -lmkl_core -lifcore -limf -lpthread -lm -ldl
|
||||||
|
|
||||||
## Aggressive optimization flags:
|
## Aggressive optimization flags + PGO Phase 2 (profile-guided optimization)
|
||||||
## -O3: Maximum optimization
|
## -fprofile-instr-use: use collected profile data to guide optimization decisions
|
||||||
## -xHost: Optimize for the host CPU architecture (Intel/AMD compatible)
|
## (branch prediction, basic block layout, inlining, loop unrolling)
|
||||||
## -fp-model fast=2: Aggressive floating-point optimizations
|
PROFDATA = ../../pgo_profile/default.profdata
|
||||||
## -fma: Enable fused multiply-add instructions
|
|
||||||
CXXAPPFLAGS = -O3 -xHost -fp-model fast=2 -fma -ipo \
|
CXXAPPFLAGS = -O3 -xHost -fp-model fast=2 -fma -ipo \
|
||||||
|
-fprofile-instr-use=$(PROFDATA) \
|
||||||
-Dfortran3 -Dnewc -I${MKLROOT}/include
|
-Dfortran3 -Dnewc -I${MKLROOT}/include
|
||||||
f90appflags = -O3 -xHost -fp-model fast=2 -fma -ipo \
|
f90appflags = -O3 -xHost -fp-model fast=2 -fma -ipo \
|
||||||
|
-fprofile-instr-use=$(PROFDATA) \
|
||||||
-align array64byte -fpp -I${MKLROOT}/include
|
-align array64byte -fpp -I${MKLROOT}/include
|
||||||
f90 = ifx
|
f90 = ifx
|
||||||
f77 = ifx
|
f77 = ifx
|
||||||
|
|||||||
@@ -220,16 +220,9 @@ void surface_integral::surf_Wave(double rex, int lev, cgh *GH, var *Rpsi4, var *
|
|||||||
pox[2][n] = rex * nz_g[n];
|
pox[2][n] = rex * nz_g[n];
|
||||||
}
|
}
|
||||||
|
|
||||||
double *shellf;
|
|
||||||
shellf = new double[n_tot * InList];
|
|
||||||
|
|
||||||
GH->PatL[lev]->data->Interp_Points(DG_List, n_tot, pox, shellf, Symmetry);
|
|
||||||
|
|
||||||
int mp, Lp, Nmin, Nmax;
|
int mp, Lp, Nmin, Nmax;
|
||||||
|
|
||||||
mp = n_tot / cpusize;
|
mp = n_tot / cpusize;
|
||||||
Lp = n_tot - cpusize * mp;
|
Lp = n_tot - cpusize * mp;
|
||||||
|
|
||||||
if (Lp > myrank)
|
if (Lp > myrank)
|
||||||
{
|
{
|
||||||
Nmin = myrank * mp + myrank;
|
Nmin = myrank * mp + myrank;
|
||||||
@@ -241,6 +234,11 @@ void surface_integral::surf_Wave(double rex, int lev, cgh *GH, var *Rpsi4, var *
|
|||||||
Nmax = Nmin + mp - 1;
|
Nmax = Nmin + mp - 1;
|
||||||
}
|
}
|
||||||
|
|
||||||
|
double *shellf;
|
||||||
|
shellf = new double[n_tot * InList];
|
||||||
|
|
||||||
|
GH->PatL[lev]->data->Interp_Points(DG_List, n_tot, pox, shellf, Symmetry, Nmin, Nmax);
|
||||||
|
|
||||||
//|~~~~~> Integrate the dot product of Dphi with the surface normal.
|
//|~~~~~> Integrate the dot product of Dphi with the surface normal.
|
||||||
|
|
||||||
double *RP_out, *IP_out;
|
double *RP_out, *IP_out;
|
||||||
@@ -363,8 +361,17 @@ void surface_integral::surf_Wave(double rex, int lev, cgh *GH, var *Rpsi4, var *
|
|||||||
}
|
}
|
||||||
//|------+ Communicate and sum the results from each processor.
|
//|------+ Communicate and sum the results from each processor.
|
||||||
|
|
||||||
MPI_Allreduce(RP_out, RP, NN, MPI_DOUBLE, MPI_SUM, MPI_COMM_WORLD);
|
{
|
||||||
MPI_Allreduce(IP_out, IP, NN, MPI_DOUBLE, MPI_SUM, MPI_COMM_WORLD);
|
double *RPIP_out = new double[2 * NN];
|
||||||
|
double *RPIP = new double[2 * NN];
|
||||||
|
memcpy(RPIP_out, RP_out, NN * sizeof(double));
|
||||||
|
memcpy(RPIP_out + NN, IP_out, NN * sizeof(double));
|
||||||
|
MPI_Allreduce(RPIP_out, RPIP, 2 * NN, MPI_DOUBLE, MPI_SUM, MPI_COMM_WORLD);
|
||||||
|
memcpy(RP, RPIP, NN * sizeof(double));
|
||||||
|
memcpy(IP, RPIP + NN, NN * sizeof(double));
|
||||||
|
delete[] RPIP_out;
|
||||||
|
delete[] RPIP;
|
||||||
|
}
|
||||||
|
|
||||||
//|------= Free memory.
|
//|------= Free memory.
|
||||||
|
|
||||||
@@ -556,8 +563,17 @@ void surface_integral::surf_Wave(double rex, int lev, cgh *GH, var *Rpsi4, var *
|
|||||||
}
|
}
|
||||||
//|------+ Communicate and sum the results from each processor.
|
//|------+ Communicate and sum the results from each processor.
|
||||||
|
|
||||||
MPI_Allreduce(RP_out, RP, NN, MPI_DOUBLE, MPI_SUM, Comm_here);
|
{
|
||||||
MPI_Allreduce(IP_out, IP, NN, MPI_DOUBLE, MPI_SUM, Comm_here);
|
double *RPIP_out = new double[2 * NN];
|
||||||
|
double *RPIP = new double[2 * NN];
|
||||||
|
memcpy(RPIP_out, RP_out, NN * sizeof(double));
|
||||||
|
memcpy(RPIP_out + NN, IP_out, NN * sizeof(double));
|
||||||
|
MPI_Allreduce(RPIP_out, RPIP, 2 * NN, MPI_DOUBLE, MPI_SUM, Comm_here);
|
||||||
|
memcpy(RP, RPIP, NN * sizeof(double));
|
||||||
|
memcpy(IP, RPIP + NN, NN * sizeof(double));
|
||||||
|
delete[] RPIP_out;
|
||||||
|
delete[] RPIP;
|
||||||
|
}
|
||||||
|
|
||||||
//|------= Free memory.
|
//|------= Free memory.
|
||||||
|
|
||||||
@@ -735,8 +751,17 @@ void surface_integral::surf_Wave(double rex, int lev, ShellPatch *GH, var *Rpsi4
|
|||||||
}
|
}
|
||||||
//|------+ Communicate and sum the results from each processor.
|
//|------+ Communicate and sum the results from each processor.
|
||||||
|
|
||||||
MPI_Allreduce(RP_out, RP, NN, MPI_DOUBLE, MPI_SUM, MPI_COMM_WORLD);
|
{
|
||||||
MPI_Allreduce(IP_out, IP, NN, MPI_DOUBLE, MPI_SUM, MPI_COMM_WORLD);
|
double *RPIP_out = new double[2 * NN];
|
||||||
|
double *RPIP = new double[2 * NN];
|
||||||
|
memcpy(RPIP_out, RP_out, NN * sizeof(double));
|
||||||
|
memcpy(RPIP_out + NN, IP_out, NN * sizeof(double));
|
||||||
|
MPI_Allreduce(RPIP_out, RPIP, 2 * NN, MPI_DOUBLE, MPI_SUM, MPI_COMM_WORLD);
|
||||||
|
memcpy(RP, RPIP, NN * sizeof(double));
|
||||||
|
memcpy(IP, RPIP + NN, NN * sizeof(double));
|
||||||
|
delete[] RPIP_out;
|
||||||
|
delete[] RPIP;
|
||||||
|
}
|
||||||
|
|
||||||
//|------= Free memory.
|
//|------= Free memory.
|
||||||
|
|
||||||
@@ -984,8 +1009,17 @@ void surface_integral::surf_Wave(double rex, int lev, ShellPatch *GH,
|
|||||||
}
|
}
|
||||||
//|------+ Communicate and sum the results from each processor.
|
//|------+ Communicate and sum the results from each processor.
|
||||||
|
|
||||||
MPI_Allreduce(RP_out, RP, NN, MPI_DOUBLE, MPI_SUM, MPI_COMM_WORLD);
|
{
|
||||||
MPI_Allreduce(IP_out, IP, NN, MPI_DOUBLE, MPI_SUM, MPI_COMM_WORLD);
|
double *RPIP_out = new double[2 * NN];
|
||||||
|
double *RPIP = new double[2 * NN];
|
||||||
|
memcpy(RPIP_out, RP_out, NN * sizeof(double));
|
||||||
|
memcpy(RPIP_out + NN, IP_out, NN * sizeof(double));
|
||||||
|
MPI_Allreduce(RPIP_out, RPIP, 2 * NN, MPI_DOUBLE, MPI_SUM, MPI_COMM_WORLD);
|
||||||
|
memcpy(RP, RPIP, NN * sizeof(double));
|
||||||
|
memcpy(IP, RPIP + NN, NN * sizeof(double));
|
||||||
|
delete[] RPIP_out;
|
||||||
|
delete[] RPIP;
|
||||||
|
}
|
||||||
|
|
||||||
//|------= Free memory.
|
//|------= Free memory.
|
||||||
|
|
||||||
@@ -1419,8 +1453,17 @@ void surface_integral::surf_Wave(double rex, int lev, ShellPatch *GH,
|
|||||||
}
|
}
|
||||||
//|------+ Communicate and sum the results from each processor.
|
//|------+ Communicate and sum the results from each processor.
|
||||||
|
|
||||||
MPI_Allreduce(RP_out, RP, NN, MPI_DOUBLE, MPI_SUM, MPI_COMM_WORLD);
|
{
|
||||||
MPI_Allreduce(IP_out, IP, NN, MPI_DOUBLE, MPI_SUM, MPI_COMM_WORLD);
|
double *RPIP_out = new double[2 * NN];
|
||||||
|
double *RPIP = new double[2 * NN];
|
||||||
|
memcpy(RPIP_out, RP_out, NN * sizeof(double));
|
||||||
|
memcpy(RPIP_out + NN, IP_out, NN * sizeof(double));
|
||||||
|
MPI_Allreduce(RPIP_out, RPIP, 2 * NN, MPI_DOUBLE, MPI_SUM, MPI_COMM_WORLD);
|
||||||
|
memcpy(RP, RPIP, NN * sizeof(double));
|
||||||
|
memcpy(IP, RPIP + NN, NN * sizeof(double));
|
||||||
|
delete[] RPIP_out;
|
||||||
|
delete[] RPIP;
|
||||||
|
}
|
||||||
|
|
||||||
//|------= Free memory.
|
//|------= Free memory.
|
||||||
|
|
||||||
@@ -1854,8 +1897,17 @@ void surface_integral::surf_Wave(double rex, int lev, cgh *GH,
|
|||||||
}
|
}
|
||||||
//|------+ Communicate and sum the results from each processor.
|
//|------+ Communicate and sum the results from each processor.
|
||||||
|
|
||||||
MPI_Allreduce(RP_out, RP, NN, MPI_DOUBLE, MPI_SUM, MPI_COMM_WORLD);
|
{
|
||||||
MPI_Allreduce(IP_out, IP, NN, MPI_DOUBLE, MPI_SUM, MPI_COMM_WORLD);
|
double *RPIP_out = new double[2 * NN];
|
||||||
|
double *RPIP = new double[2 * NN];
|
||||||
|
memcpy(RPIP_out, RP_out, NN * sizeof(double));
|
||||||
|
memcpy(RPIP_out + NN, IP_out, NN * sizeof(double));
|
||||||
|
MPI_Allreduce(RPIP_out, RPIP, 2 * NN, MPI_DOUBLE, MPI_SUM, MPI_COMM_WORLD);
|
||||||
|
memcpy(RP, RPIP, NN * sizeof(double));
|
||||||
|
memcpy(IP, RPIP + NN, NN * sizeof(double));
|
||||||
|
delete[] RPIP_out;
|
||||||
|
delete[] RPIP;
|
||||||
|
}
|
||||||
|
|
||||||
//|------= Free memory.
|
//|------= Free memory.
|
||||||
|
|
||||||
@@ -2040,8 +2092,17 @@ void surface_integral::surf_Wave(double rex, int lev, NullShellPatch2 *GH, var *
|
|||||||
}
|
}
|
||||||
//|------+ Communicate and sum the results from each processor.
|
//|------+ Communicate and sum the results from each processor.
|
||||||
|
|
||||||
MPI_Allreduce(RP_out, RP, NN, MPI_DOUBLE, MPI_SUM, MPI_COMM_WORLD);
|
{
|
||||||
MPI_Allreduce(IP_out, IP, NN, MPI_DOUBLE, MPI_SUM, MPI_COMM_WORLD);
|
double *RPIP_out = new double[2 * NN];
|
||||||
|
double *RPIP = new double[2 * NN];
|
||||||
|
memcpy(RPIP_out, RP_out, NN * sizeof(double));
|
||||||
|
memcpy(RPIP_out + NN, IP_out, NN * sizeof(double));
|
||||||
|
MPI_Allreduce(RPIP_out, RPIP, 2 * NN, MPI_DOUBLE, MPI_SUM, MPI_COMM_WORLD);
|
||||||
|
memcpy(RP, RPIP, NN * sizeof(double));
|
||||||
|
memcpy(IP, RPIP + NN, NN * sizeof(double));
|
||||||
|
delete[] RPIP_out;
|
||||||
|
delete[] RPIP;
|
||||||
|
}
|
||||||
|
|
||||||
//|------= Free memory.
|
//|------= Free memory.
|
||||||
|
|
||||||
@@ -2226,8 +2287,17 @@ void surface_integral::surf_Wave(double rex, int lev, NullShellPatch *GH, var *R
|
|||||||
}
|
}
|
||||||
//|------+ Communicate and sum the results from each processor.
|
//|------+ Communicate and sum the results from each processor.
|
||||||
|
|
||||||
MPI_Allreduce(RP_out, RP, NN, MPI_DOUBLE, MPI_SUM, MPI_COMM_WORLD);
|
{
|
||||||
MPI_Allreduce(IP_out, IP, NN, MPI_DOUBLE, MPI_SUM, MPI_COMM_WORLD);
|
double *RPIP_out = new double[2 * NN];
|
||||||
|
double *RPIP = new double[2 * NN];
|
||||||
|
memcpy(RPIP_out, RP_out, NN * sizeof(double));
|
||||||
|
memcpy(RPIP_out + NN, IP_out, NN * sizeof(double));
|
||||||
|
MPI_Allreduce(RPIP_out, RPIP, 2 * NN, MPI_DOUBLE, MPI_SUM, MPI_COMM_WORLD);
|
||||||
|
memcpy(RP, RPIP, NN * sizeof(double));
|
||||||
|
memcpy(IP, RPIP + NN, NN * sizeof(double));
|
||||||
|
delete[] RPIP_out;
|
||||||
|
delete[] RPIP;
|
||||||
|
}
|
||||||
|
|
||||||
//|------= Free memory.
|
//|------= Free memory.
|
||||||
|
|
||||||
@@ -2314,25 +2384,9 @@ void surface_integral::surf_MassPAng(double rex, int lev, cgh *GH, var *chi, var
|
|||||||
pox[2][n] = rex * nz_g[n];
|
pox[2][n] = rex * nz_g[n];
|
||||||
}
|
}
|
||||||
|
|
||||||
double *shellf;
|
|
||||||
shellf = new double[n_tot * InList];
|
|
||||||
|
|
||||||
// we have assumed there is only one box on this level,
|
|
||||||
// so we do not need loop boxes
|
|
||||||
GH->PatL[lev]->data->Interp_Points(DG_List, n_tot, pox, shellf, Symmetry);
|
|
||||||
|
|
||||||
double Mass_out = 0;
|
|
||||||
double ang_outx, ang_outy, ang_outz;
|
|
||||||
double p_outx, p_outy, p_outz;
|
|
||||||
ang_outx = ang_outy = ang_outz = 0.0;
|
|
||||||
p_outx = p_outy = p_outz = 0.0;
|
|
||||||
const double f1o8 = 0.125;
|
|
||||||
|
|
||||||
int mp, Lp, Nmin, Nmax;
|
int mp, Lp, Nmin, Nmax;
|
||||||
|
|
||||||
mp = n_tot / cpusize;
|
mp = n_tot / cpusize;
|
||||||
Lp = n_tot - cpusize * mp;
|
Lp = n_tot - cpusize * mp;
|
||||||
|
|
||||||
if (Lp > myrank)
|
if (Lp > myrank)
|
||||||
{
|
{
|
||||||
Nmin = myrank * mp + myrank;
|
Nmin = myrank * mp + myrank;
|
||||||
@@ -2344,6 +2398,20 @@ void surface_integral::surf_MassPAng(double rex, int lev, cgh *GH, var *chi, var
|
|||||||
Nmax = Nmin + mp - 1;
|
Nmax = Nmin + mp - 1;
|
||||||
}
|
}
|
||||||
|
|
||||||
|
double *shellf;
|
||||||
|
shellf = new double[n_tot * InList];
|
||||||
|
|
||||||
|
// we have assumed there is only one box on this level,
|
||||||
|
// so we do not need loop boxes
|
||||||
|
GH->PatL[lev]->data->Interp_Points(DG_List, n_tot, pox, shellf, Symmetry, Nmin, Nmax);
|
||||||
|
|
||||||
|
double Mass_out = 0;
|
||||||
|
double ang_outx, ang_outy, ang_outz;
|
||||||
|
double p_outx, p_outy, p_outz;
|
||||||
|
ang_outx = ang_outy = ang_outz = 0.0;
|
||||||
|
p_outx = p_outy = p_outz = 0.0;
|
||||||
|
const double f1o8 = 0.125;
|
||||||
|
|
||||||
double Chi, Psi;
|
double Chi, Psi;
|
||||||
double Gxx, Gxy, Gxz, Gyy, Gyz, Gzz;
|
double Gxx, Gxy, Gxz, Gyy, Gyz, Gzz;
|
||||||
double gupxx, gupxy, gupxz, gupyy, gupyz, gupzz;
|
double gupxx, gupxy, gupxz, gupyy, gupyz, gupzz;
|
||||||
@@ -2464,15 +2532,13 @@ void surface_integral::surf_MassPAng(double rex, int lev, cgh *GH, var *chi, var
|
|||||||
}
|
}
|
||||||
}
|
}
|
||||||
|
|
||||||
MPI_Allreduce(&Mass_out, &mass, 1, MPI_DOUBLE, MPI_SUM, MPI_COMM_WORLD);
|
{
|
||||||
|
double scalar_out[7] = {Mass_out, ang_outx, ang_outy, ang_outz, p_outx, p_outy, p_outz};
|
||||||
MPI_Allreduce(&ang_outx, &sx, 1, MPI_DOUBLE, MPI_SUM, MPI_COMM_WORLD);
|
double scalar_in[7];
|
||||||
MPI_Allreduce(&ang_outy, &sy, 1, MPI_DOUBLE, MPI_SUM, MPI_COMM_WORLD);
|
MPI_Allreduce(scalar_out, scalar_in, 7, MPI_DOUBLE, MPI_SUM, MPI_COMM_WORLD);
|
||||||
MPI_Allreduce(&ang_outz, &sz, 1, MPI_DOUBLE, MPI_SUM, MPI_COMM_WORLD);
|
mass = scalar_in[0]; sx = scalar_in[1]; sy = scalar_in[2]; sz = scalar_in[3];
|
||||||
|
px = scalar_in[4]; py = scalar_in[5]; pz = scalar_in[6];
|
||||||
MPI_Allreduce(&p_outx, &px, 1, MPI_DOUBLE, MPI_SUM, MPI_COMM_WORLD);
|
}
|
||||||
MPI_Allreduce(&p_outy, &py, 1, MPI_DOUBLE, MPI_SUM, MPI_COMM_WORLD);
|
|
||||||
MPI_Allreduce(&p_outz, &pz, 1, MPI_DOUBLE, MPI_SUM, MPI_COMM_WORLD);
|
|
||||||
|
|
||||||
#ifdef GaussInt
|
#ifdef GaussInt
|
||||||
mass = mass * rex * rex * dphi * factor;
|
mass = mass * rex * rex * dphi * factor;
|
||||||
@@ -2735,15 +2801,13 @@ void surface_integral::surf_MassPAng(double rex, int lev, cgh *GH, var *chi, var
|
|||||||
}
|
}
|
||||||
}
|
}
|
||||||
|
|
||||||
MPI_Allreduce(&Mass_out, &mass, 1, MPI_DOUBLE, MPI_SUM, Comm_here);
|
{
|
||||||
|
double scalar_out[7] = {Mass_out, ang_outx, ang_outy, ang_outz, p_outx, p_outy, p_outz};
|
||||||
MPI_Allreduce(&ang_outx, &sx, 1, MPI_DOUBLE, MPI_SUM, Comm_here);
|
double scalar_in[7];
|
||||||
MPI_Allreduce(&ang_outy, &sy, 1, MPI_DOUBLE, MPI_SUM, Comm_here);
|
MPI_Allreduce(scalar_out, scalar_in, 7, MPI_DOUBLE, MPI_SUM, Comm_here);
|
||||||
MPI_Allreduce(&ang_outz, &sz, 1, MPI_DOUBLE, MPI_SUM, Comm_here);
|
mass = scalar_in[0]; sx = scalar_in[1]; sy = scalar_in[2]; sz = scalar_in[3];
|
||||||
|
px = scalar_in[4]; py = scalar_in[5]; pz = scalar_in[6];
|
||||||
MPI_Allreduce(&p_outx, &px, 1, MPI_DOUBLE, MPI_SUM, Comm_here);
|
}
|
||||||
MPI_Allreduce(&p_outy, &py, 1, MPI_DOUBLE, MPI_SUM, Comm_here);
|
|
||||||
MPI_Allreduce(&p_outz, &pz, 1, MPI_DOUBLE, MPI_SUM, Comm_here);
|
|
||||||
|
|
||||||
#ifdef GaussInt
|
#ifdef GaussInt
|
||||||
mass = mass * rex * rex * dphi * factor;
|
mass = mass * rex * rex * dphi * factor;
|
||||||
@@ -3020,15 +3084,13 @@ void surface_integral::surf_MassPAng(double rex, int lev, ShellPatch *GH, var *c
|
|||||||
}
|
}
|
||||||
}
|
}
|
||||||
|
|
||||||
MPI_Allreduce(&Mass_out, &mass, 1, MPI_DOUBLE, MPI_SUM, MPI_COMM_WORLD);
|
{
|
||||||
|
double scalar_out[7] = {Mass_out, ang_outx, ang_outy, ang_outz, p_outx, p_outy, p_outz};
|
||||||
MPI_Allreduce(&ang_outx, &sx, 1, MPI_DOUBLE, MPI_SUM, MPI_COMM_WORLD);
|
double scalar_in[7];
|
||||||
MPI_Allreduce(&ang_outy, &sy, 1, MPI_DOUBLE, MPI_SUM, MPI_COMM_WORLD);
|
MPI_Allreduce(scalar_out, scalar_in, 7, MPI_DOUBLE, MPI_SUM, MPI_COMM_WORLD);
|
||||||
MPI_Allreduce(&ang_outz, &sz, 1, MPI_DOUBLE, MPI_SUM, MPI_COMM_WORLD);
|
mass = scalar_in[0]; sx = scalar_in[1]; sy = scalar_in[2]; sz = scalar_in[3];
|
||||||
|
px = scalar_in[4]; py = scalar_in[5]; pz = scalar_in[6];
|
||||||
MPI_Allreduce(&p_outx, &px, 1, MPI_DOUBLE, MPI_SUM, MPI_COMM_WORLD);
|
}
|
||||||
MPI_Allreduce(&p_outy, &py, 1, MPI_DOUBLE, MPI_SUM, MPI_COMM_WORLD);
|
|
||||||
MPI_Allreduce(&p_outz, &pz, 1, MPI_DOUBLE, MPI_SUM, MPI_COMM_WORLD);
|
|
||||||
|
|
||||||
#ifdef GaussInt
|
#ifdef GaussInt
|
||||||
mass = mass * rex * rex * dphi * factor;
|
mass = mass * rex * rex * dphi * factor;
|
||||||
@@ -3607,8 +3669,17 @@ void surface_integral::surf_Wave(double rex, cgh *GH, ShellPatch *SH,
|
|||||||
}
|
}
|
||||||
//|------+ Communicate and sum the results from each processor.
|
//|------+ Communicate and sum the results from each processor.
|
||||||
|
|
||||||
MPI_Allreduce(RP_out, RP, NN, MPI_DOUBLE, MPI_SUM, MPI_COMM_WORLD);
|
{
|
||||||
MPI_Allreduce(IP_out, IP, NN, MPI_DOUBLE, MPI_SUM, MPI_COMM_WORLD);
|
double *RPIP_out = new double[2 * NN];
|
||||||
|
double *RPIP = new double[2 * NN];
|
||||||
|
memcpy(RPIP_out, RP_out, NN * sizeof(double));
|
||||||
|
memcpy(RPIP_out + NN, IP_out, NN * sizeof(double));
|
||||||
|
MPI_Allreduce(RPIP_out, RPIP, 2 * NN, MPI_DOUBLE, MPI_SUM, MPI_COMM_WORLD);
|
||||||
|
memcpy(RP, RPIP, NN * sizeof(double));
|
||||||
|
memcpy(IP, RPIP + NN, NN * sizeof(double));
|
||||||
|
delete[] RPIP_out;
|
||||||
|
delete[] RPIP;
|
||||||
|
}
|
||||||
|
|
||||||
//|------= Free memory.
|
//|------= Free memory.
|
||||||
|
|
||||||
|
|||||||
@@ -15,12 +15,13 @@ import time
|
|||||||
## taskset ensures all child processes inherit the CPU affinity mask
|
## taskset ensures all child processes inherit the CPU affinity mask
|
||||||
## This forces make and all compiler processes to use only nohz_full cores (4-55, 60-111)
|
## This forces make and all compiler processes to use only nohz_full cores (4-55, 60-111)
|
||||||
## Format: taskset -c 4-55,60-111 ensures processes only run on these cores
|
## Format: taskset -c 4-55,60-111 ensures processes only run on these cores
|
||||||
NUMACTL_CPU_BIND = "taskset -c 0-111"
|
#NUMACTL_CPU_BIND = "taskset -c 0-111"
|
||||||
|
NUMACTL_CPU_BIND = "taskset -c 16-47,64-95"
|
||||||
|
|
||||||
## Build parallelism configuration
|
## Build parallelism configuration
|
||||||
## Use nohz_full cores (4-55, 60-111) for compilation: 52 + 52 = 104 cores
|
## Use nohz_full cores (4-55, 60-111) for compilation: 52 + 52 = 104 cores
|
||||||
## Set make -j to utilize available cores for faster builds
|
## Set make -j to utilize available cores for faster builds
|
||||||
BUILD_JOBS = 104
|
BUILD_JOBS = 96
|
||||||
|
|
||||||
|
|
||||||
##################################################################
|
##################################################################
|
||||||
@@ -117,6 +118,7 @@ def run_ABE():
|
|||||||
|
|
||||||
if (input_data.GPU_Calculation == "no"):
|
if (input_data.GPU_Calculation == "no"):
|
||||||
mpi_command = NUMACTL_CPU_BIND + " mpirun -np " + str(input_data.MPI_processes) + " ./ABE"
|
mpi_command = NUMACTL_CPU_BIND + " mpirun -np " + str(input_data.MPI_processes) + " ./ABE"
|
||||||
|
#mpi_command = " mpirun -np " + str(input_data.MPI_processes) + " ./ABE"
|
||||||
mpi_command_outfile = "ABE_out.log"
|
mpi_command_outfile = "ABE_out.log"
|
||||||
elif (input_data.GPU_Calculation == "yes"):
|
elif (input_data.GPU_Calculation == "yes"):
|
||||||
mpi_command = NUMACTL_CPU_BIND + " mpirun -np " + str(input_data.MPI_processes) + " ./ABEGPU"
|
mpi_command = NUMACTL_CPU_BIND + " mpirun -np " + str(input_data.MPI_processes) + " ./ABEGPU"
|
||||||
@@ -158,7 +160,8 @@ def run_TwoPunctureABE():
|
|||||||
print( )
|
print( )
|
||||||
|
|
||||||
## Define the command to run
|
## Define the command to run
|
||||||
TwoPuncture_command = NUMACTL_CPU_BIND + " ./TwoPunctureABE"
|
#TwoPuncture_command = NUMACTL_CPU_BIND + " ./TwoPunctureABE"
|
||||||
|
TwoPuncture_command = " ./TwoPunctureABE"
|
||||||
TwoPuncture_command_outfile = "TwoPunctureABE_out.log"
|
TwoPuncture_command_outfile = "TwoPunctureABE_out.log"
|
||||||
|
|
||||||
## Execute the command with subprocess.Popen and stream output
|
## Execute the command with subprocess.Popen and stream output
|
||||||
|
|||||||
29
parallel_plot_helper.py
Normal file
29
parallel_plot_helper.py
Normal file
@@ -0,0 +1,29 @@
|
|||||||
|
import multiprocessing
|
||||||
|
|
||||||
|
def run_plot_task(task):
|
||||||
|
"""Execute a single plotting task.
|
||||||
|
|
||||||
|
Parameters
|
||||||
|
----------
|
||||||
|
task : tuple
|
||||||
|
A tuple of (function, args_tuple) where function is a callable
|
||||||
|
plotting function and args_tuple contains its arguments.
|
||||||
|
"""
|
||||||
|
func, args = task
|
||||||
|
return func(*args)
|
||||||
|
|
||||||
|
|
||||||
|
def run_plot_tasks_parallel(plot_tasks):
|
||||||
|
"""Execute a list of independent plotting tasks in parallel.
|
||||||
|
|
||||||
|
Uses the 'fork' context to create worker processes so that the main
|
||||||
|
script is NOT re-imported/re-executed in child processes.
|
||||||
|
|
||||||
|
Parameters
|
||||||
|
----------
|
||||||
|
plot_tasks : list of tuples
|
||||||
|
Each element is (function, args_tuple).
|
||||||
|
"""
|
||||||
|
ctx = multiprocessing.get_context('fork')
|
||||||
|
with ctx.Pool() as pool:
|
||||||
|
pool.map(run_plot_task, plot_tasks)
|
||||||
97
pgo_profile/PGO_Profile_Analysis.md
Normal file
97
pgo_profile/PGO_Profile_Analysis.md
Normal file
@@ -0,0 +1,97 @@
|
|||||||
|
# AMSS-NCKU PGO Profile Analysis Report
|
||||||
|
|
||||||
|
## 1. Profiling Environment
|
||||||
|
|
||||||
|
| Item | Value |
|
||||||
|
|------|-------|
|
||||||
|
| Compiler | Intel oneAPI DPC++/C++ 2025.3.0 (icpx/ifx) |
|
||||||
|
| Instrumentation Flag | `-fprofile-instr-generate` |
|
||||||
|
| Optimization Level (instrumented) | `-O2 -xHost -fma` |
|
||||||
|
| MPI Processes | 1 (single process to avoid MPI+instrumentation deadlock) |
|
||||||
|
| Profile File | `default_9725750769337483397_0.profraw` (327 KB) |
|
||||||
|
| Merged Profile | `default.profdata` (394 KB) |
|
||||||
|
| llvm-profdata | `/home/intel/oneapi/compiler/2025.3/bin/compiler/llvm-profdata` |
|
||||||
|
|
||||||
|
## 2. Reduced Simulation Parameters (for profiling run)
|
||||||
|
|
||||||
|
| Parameter | Production Value | Profiling Value |
|
||||||
|
|-----------|-----------------|-----------------|
|
||||||
|
| MPI_processes | 64 | 1 |
|
||||||
|
| grid_level | 9 | 4 |
|
||||||
|
| static_grid_level | 5 | 3 |
|
||||||
|
| static_grid_number | 96 | 24 |
|
||||||
|
| moving_grid_number | 48 | 16 |
|
||||||
|
| largest_box_xyz_max | 320^3 | 160^3 |
|
||||||
|
| Final_Evolution_Time | 1000.0 | 10.0 |
|
||||||
|
| Evolution_Step_Number | 10,000,000 | 1,000 |
|
||||||
|
| Detector_Number | 12 | 2 |
|
||||||
|
|
||||||
|
## 3. Profile Summary
|
||||||
|
|
||||||
|
| Metric | Value |
|
||||||
|
|--------|-------|
|
||||||
|
| Total instrumented functions | 1,392 |
|
||||||
|
| Functions with non-zero counts | 117 (8.4%) |
|
||||||
|
| Functions with zero counts | 1,275 (91.6%) |
|
||||||
|
| Maximum function entry count | 386,459,248 |
|
||||||
|
| Maximum internal block count | 370,477,680 |
|
||||||
|
| Total block count | 4,198,023,118 |
|
||||||
|
|
||||||
|
## 4. Top 20 Hotspot Functions
|
||||||
|
|
||||||
|
| Rank | Total Count | Max Block Count | Function | Category |
|
||||||
|
|------|------------|-----------------|----------|----------|
|
||||||
|
| 1 | 1,241,601,732 | 370,477,680 | `polint_` | Interpolation |
|
||||||
|
| 2 | 755,994,435 | 230,156,640 | `prolong3_` | Grid prolongation |
|
||||||
|
| 3 | 667,964,095 | 3,697,792 | `compute_rhs_bssn_` | BSSN RHS evolution |
|
||||||
|
| 4 | 539,736,051 | 386,459,248 | `symmetry_bd_` | Symmetry boundary |
|
||||||
|
| 5 | 277,310,808 | 53,170,728 | `lopsided_` | Lopsided FD stencil |
|
||||||
|
| 6 | 155,534,488 | 94,535,040 | `decide3d_` | 3D grid decision |
|
||||||
|
| 7 | 119,267,712 | 19,266,048 | `rungekutta4_rout_` | RK4 time integrator |
|
||||||
|
| 8 | 91,574,616 | 48,824,160 | `kodis_` | Kreiss-Oliger dissipation |
|
||||||
|
| 9 | 67,555,389 | 43,243,680 | `fderivs_` | Finite differences |
|
||||||
|
| 10 | 55,296,000 | 42,246,144 | `misc::fact(int)` | Factorial utility |
|
||||||
|
| 11 | 43,191,071 | 27,663,328 | `fdderivs_` | 2nd-order FD derivatives |
|
||||||
|
| 12 | 36,233,965 | 22,429,440 | `restrict3_` | Grid restriction |
|
||||||
|
| 13 | 24,698,512 | 17,231,520 | `polin3_` | Polynomial interpolation |
|
||||||
|
| 14 | 22,962,942 | 20,968,768 | `copy_` | Data copy |
|
||||||
|
| 15 | 20,135,696 | 17,259,168 | `Ansorg::barycentric(...)` | Spectral interpolation |
|
||||||
|
| 16 | 14,650,224 | 7,224,768 | `Ansorg::barycentric_omega(...)` | Spectral weights |
|
||||||
|
| 17 | 13,242,296 | 2,871,920 | `global_interp_` | Global interpolation |
|
||||||
|
| 18 | 12,672,000 | 7,734,528 | `sommerfeld_rout_` | Sommerfeld boundary |
|
||||||
|
| 19 | 6,872,832 | 1,880,064 | `sommerfeld_routbam_` | Sommerfeld boundary (BAM) |
|
||||||
|
| 20 | 5,709,900 | 2,809,632 | `l2normhelper_` | L2 norm computation |
|
||||||
|
|
||||||
|
## 5. Hotspot Category Breakdown
|
||||||
|
|
||||||
|
Top 20 functions account for ~98% of total execution counts:
|
||||||
|
|
||||||
|
| Category | Functions | Combined Count | Share |
|
||||||
|
|----------|-----------|---------------|-------|
|
||||||
|
| Interpolation / Prolongation / Restriction | polint_, prolong3_, restrict3_, polin3_, global_interp_, Ansorg::* | ~2,093M | ~50% |
|
||||||
|
| BSSN RHS + FD stencils | compute_rhs_bssn_, lopsided_, fderivs_, fdderivs_ | ~1,056M | ~25% |
|
||||||
|
| Boundary conditions | symmetry_bd_, sommerfeld_rout_, sommerfeld_routbam_ | ~559M | ~13% |
|
||||||
|
| Time integration | rungekutta4_rout_ | ~119M | ~3% |
|
||||||
|
| Dissipation | kodis_ | ~92M | ~2% |
|
||||||
|
| Utilities | misc::fact, decide3d_, copy_, l2normhelper_ | ~256M | ~6% |
|
||||||
|
|
||||||
|
## 6. Conclusions
|
||||||
|
|
||||||
|
1. **Profile data is valid**: 1,392 functions instrumented, 117 exercised with ~4.2 billion total counts.
|
||||||
|
2. **Hotspot concentration is high**: Top 5 functions alone account for ~76% of all counts, which is ideal for PGO — the compiler has strong branch/layout optimization targets.
|
||||||
|
3. **Fortran numerical kernels dominate**: `polint_`, `prolong3_`, `compute_rhs_bssn_`, `symmetry_bd_`, `lopsided_` are all Fortran routines in the inner evolution loop. PGO will optimize their branch prediction and basic block layout.
|
||||||
|
4. **91.6% of functions have zero counts**: These are code paths for unused features (GPU, BSSN-EScalar, BSSN-EM, Z4C, etc.). PGO will deprioritize them, improving instruction cache utilization.
|
||||||
|
5. **Profile is representative**: Despite the reduced grid size, the code path coverage matches production — the same kernels (RHS, prolongation, restriction, boundary) are exercised. PGO branch probabilities from this profile will transfer well to full-scale runs.
|
||||||
|
|
||||||
|
## 7. PGO Phase 2 Usage
|
||||||
|
|
||||||
|
To apply the profile, use the following flags in `makefile.inc`:
|
||||||
|
|
||||||
|
```makefile
|
||||||
|
CXXAPPFLAGS = -O3 -xHost -fp-model fast=2 -fma -ipo \
|
||||||
|
-fprofile-instr-use=/home/amss/AMSS-NCKU/pgo_profile/default.profdata \
|
||||||
|
-Dfortran3 -Dnewc -I${MKLROOT}/include
|
||||||
|
f90appflags = -O3 -xHost -fp-model fast=2 -fma -ipo \
|
||||||
|
-fprofile-instr-use=/home/amss/AMSS-NCKU/pgo_profile/default.profdata \
|
||||||
|
-align array64byte -fpp -I${MKLROOT}/include
|
||||||
|
```
|
||||||
BIN
pgo_profile/default.profdata
Normal file
BIN
pgo_profile/default.profdata
Normal file
Binary file not shown.
BIN
pgo_profile/default.profdata.backup
Normal file
BIN
pgo_profile/default.profdata.backup
Normal file
Binary file not shown.
BIN
pgo_profile/default_15874826282416242821_0_58277.profraw
Normal file
BIN
pgo_profile/default_15874826282416242821_0_58277.profraw
Normal file
Binary file not shown.
BIN
pgo_profile/default_9725750769337483397_0.profraw
Normal file
BIN
pgo_profile/default_9725750769337483397_0.profraw
Normal file
Binary file not shown.
@@ -11,6 +11,8 @@
|
|||||||
import numpy ## numpy for array operations
|
import numpy ## numpy for array operations
|
||||||
import scipy ## scipy for interpolation and signal processing
|
import scipy ## scipy for interpolation and signal processing
|
||||||
import math
|
import math
|
||||||
|
import matplotlib
|
||||||
|
matplotlib.use('Agg') ## use non-interactive backend for multiprocessing safety
|
||||||
import matplotlib.pyplot as plt ## matplotlib for plotting
|
import matplotlib.pyplot as plt ## matplotlib for plotting
|
||||||
import os ## os for system/file operations
|
import os ## os for system/file operations
|
||||||
|
|
||||||
|
|||||||
@@ -8,16 +8,23 @@
|
|||||||
##
|
##
|
||||||
#################################################
|
#################################################
|
||||||
|
|
||||||
|
## Restrict OpenMP to one thread per process so that running
|
||||||
|
## many workers in parallel does not create an O(workers * BLAS_threads)
|
||||||
|
## thread explosion. The variable MUST be set before numpy/scipy
|
||||||
|
## are imported, because the BLAS library reads them only at load time.
|
||||||
|
import os
|
||||||
|
os.environ.setdefault("OMP_NUM_THREADS", "1")
|
||||||
|
|
||||||
import numpy
|
import numpy
|
||||||
import scipy
|
import scipy
|
||||||
|
import matplotlib
|
||||||
|
matplotlib.use('Agg') ## use non-interactive backend for multiprocessing safety
|
||||||
import matplotlib.pyplot as plt
|
import matplotlib.pyplot as plt
|
||||||
from matplotlib.colors import LogNorm
|
from matplotlib.colors import LogNorm
|
||||||
from mpl_toolkits.mplot3d import Axes3D
|
from mpl_toolkits.mplot3d import Axes3D
|
||||||
## import torch
|
## import torch
|
||||||
import AMSS_NCKU_Input as input_data
|
import AMSS_NCKU_Input as input_data
|
||||||
|
|
||||||
import os
|
|
||||||
|
|
||||||
|
|
||||||
#########################################################################################
|
#########################################################################################
|
||||||
|
|
||||||
@@ -192,3 +199,19 @@ def get_data_xy( Rmin, Rmax, n, data0, time, figure_title, figure_outdir ):
|
|||||||
|
|
||||||
####################################################################################
|
####################################################################################
|
||||||
|
|
||||||
|
|
||||||
|
####################################################################################
|
||||||
|
## Allow this module to be run as a standalone script so that each
|
||||||
|
## binary-data plot can be executed in a fresh subprocess whose BLAS
|
||||||
|
## environment variables (set above) take effect before numpy loads.
|
||||||
|
##
|
||||||
|
## Usage: python3 plot_binary_data.py <filename> <binary_outdir> <figure_outdir>
|
||||||
|
####################################################################################
|
||||||
|
|
||||||
|
if __name__ == '__main__':
|
||||||
|
import sys
|
||||||
|
if len(sys.argv) != 4:
|
||||||
|
print(f"Usage: {sys.argv[0]} <filename> <binary_outdir> <figure_outdir>")
|
||||||
|
sys.exit(1)
|
||||||
|
plot_binary_data(sys.argv[1], sys.argv[2], sys.argv[3])
|
||||||
|
|
||||||
|
|||||||
@@ -8,6 +8,8 @@
|
|||||||
#################################################
|
#################################################
|
||||||
|
|
||||||
import numpy ## numpy for array operations
|
import numpy ## numpy for array operations
|
||||||
|
import matplotlib
|
||||||
|
matplotlib.use('Agg') ## use non-interactive backend for multiprocessing safety
|
||||||
import matplotlib.pyplot as plt ## matplotlib for plotting
|
import matplotlib.pyplot as plt ## matplotlib for plotting
|
||||||
from mpl_toolkits.mplot3d import Axes3D ## needed for 3D plots
|
from mpl_toolkits.mplot3d import Axes3D ## needed for 3D plots
|
||||||
import glob
|
import glob
|
||||||
@@ -15,6 +17,9 @@ import os ## operating system utilities
|
|||||||
|
|
||||||
import plot_binary_data
|
import plot_binary_data
|
||||||
import AMSS_NCKU_Input as input_data
|
import AMSS_NCKU_Input as input_data
|
||||||
|
import subprocess
|
||||||
|
import sys
|
||||||
|
import multiprocessing
|
||||||
|
|
||||||
# plt.rcParams['text.usetex'] = True ## enable LaTeX fonts in plots
|
# plt.rcParams['text.usetex'] = True ## enable LaTeX fonts in plots
|
||||||
|
|
||||||
@@ -50,10 +55,40 @@ def generate_binary_data_plot( binary_outdir, figure_outdir ):
|
|||||||
file_list.append(x)
|
file_list.append(x)
|
||||||
print(x)
|
print(x)
|
||||||
|
|
||||||
## Plot each file in the list
|
## Plot each file in parallel using subprocesses.
|
||||||
|
## Each subprocess is a fresh Python process where the BLAS thread-count
|
||||||
|
## environment variables (set at the top of plot_binary_data.py) take
|
||||||
|
## effect before numpy is imported. This avoids the thread explosion
|
||||||
|
## that occurs when multiprocessing.Pool with 'fork' context inherits
|
||||||
|
## already-initialized multi-threaded BLAS from the parent.
|
||||||
|
script = os.path.join( os.path.dirname(__file__), "plot_binary_data.py" )
|
||||||
|
max_workers = min( multiprocessing.cpu_count(), len(file_list) ) if file_list else 0
|
||||||
|
|
||||||
|
running = []
|
||||||
|
failed = []
|
||||||
for filename in file_list:
|
for filename in file_list:
|
||||||
print(filename)
|
print(filename)
|
||||||
plot_binary_data.plot_binary_data(filename, binary_outdir, figure_outdir)
|
proc = subprocess.Popen(
|
||||||
|
[sys.executable, script, filename, binary_outdir, figure_outdir],
|
||||||
|
)
|
||||||
|
running.append( (proc, filename) )
|
||||||
|
## Keep at most max_workers subprocesses active at a time
|
||||||
|
if len(running) >= max_workers:
|
||||||
|
p, fn = running.pop(0)
|
||||||
|
p.wait()
|
||||||
|
if p.returncode != 0:
|
||||||
|
failed.append(fn)
|
||||||
|
|
||||||
|
## Wait for all remaining subprocesses to finish
|
||||||
|
for p, fn in running:
|
||||||
|
p.wait()
|
||||||
|
if p.returncode != 0:
|
||||||
|
failed.append(fn)
|
||||||
|
|
||||||
|
if failed:
|
||||||
|
print( " WARNING: the following binary data plots failed:" )
|
||||||
|
for fn in failed:
|
||||||
|
print( " ", fn )
|
||||||
|
|
||||||
print( )
|
print( )
|
||||||
print( " Binary Data Plot Has been Finished " )
|
print( " Binary Data Plot Has been Finished " )
|
||||||
|
|||||||
Reference in New Issue
Block a user