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13 Commits
yx-fmisc
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cjy-oneapi
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5
.gitignore
vendored
5
.gitignore
vendored
@@ -1,2 +1,7 @@
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__pycache__
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GW150914
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GW150914-origin
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GW150914-mini
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docs
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*.tmp
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@@ -22,6 +22,8 @@ GPU_Calculation = "no" ## Use GPU or not
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## (prefer "no" in the current version, because the GPU part may have bugs when integrated in this Python interface)
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CPU_Part = 1.0
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GPU_Part = 0.0
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Debug_NaN_Check = 0 ## enable NaN checks in compute_rhs_bssn: 0 (off) or 1 (on)
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#################################################
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233
AMSS_NCKU_Input_Mini.py
Normal file
233
AMSS_NCKU_Input_Mini.py
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@@ -0,0 +1,233 @@
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#################################################
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##
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## This file provides the input parameters required for numerical relativity.
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## XIAOQU
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## 2024/03/19 --- 2025/09/14
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## Modified for GW150914-mini test case
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##
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#################################################
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import numpy
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#################################################
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## Setting MPI processes and the output file directory
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File_directory = "GW150914-mini" ## output file directory
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Output_directory = "binary_output" ## binary data file directory
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## The file directory name should not be too long
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MPI_processes = 4 ## number of mpi processes used in the simulation (Reduced for laptop)
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GPU_Calculation = "no" ## Use GPU or not
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## (prefer "no" in the current version, because the GPU part may have bugs when integrated in this Python interface)
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CPU_Part = 1.0
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GPU_Part = 0.0
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#################################################
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#################################################
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## Setting the physical system and numerical method
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Symmetry = "equatorial-symmetry" ## Symmetry of System: choose equatorial-symmetry、no-symmetry、octant-symmetry
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Equation_Class = "BSSN" ## Evolution Equation: choose "BSSN", "BSSN-EScalar", "BSSN-EM", "Z4C"
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## If "BSSN-EScalar" is chosen, it is necessary to set other parameters below
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Initial_Data_Method = "Ansorg-TwoPuncture" ## initial data method: choose "Ansorg-TwoPuncture", "Lousto-Analytical", "Cao-Analytical", "KerrSchild-Analytical"
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Time_Evolution_Method = "runge-kutta-45" ## time evolution method: choose "runge-kutta-45"
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Finite_Diffenence_Method = "4th-order" ## finite-difference method: choose "2nd-order", "4th-order", "6th-order", "8th-order"
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Debug_NaN_Check = 0 ## enable NaN checks in compute_rhs_bssn: 0 (off) or 1 (on)
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#################################################
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#################################################
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## Setting the time evolutionary information
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Start_Evolution_Time = 0.0 ## start evolution time t0
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Final_Evolution_Time = 100.0 ## final evolution time t1 (Reduced for quick test)
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Check_Time = 10.0
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Dump_Time = 10.0 ## time inteval dT for dumping binary data
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D2_Dump_Time = 10.0 ## dump the ascii data for 2d surface after dT'
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Analysis_Time = 1.0 ## dump the puncture position and GW psi4 after dT"
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Evolution_Step_Number = 10000000 ## stop the calculation after the maximal step number
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Courant_Factor = 0.5 ## Courant Factor
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Dissipation = 0.15 ## Kreiss-Oliger Dissipation Strength
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#################################################
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#################################################
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## Setting the grid structure
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basic_grid_set = "Patch" ## grid structure: choose "Patch" or "Shell-Patch"
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grid_center_set = "Cell" ## grid center: chose "Cell" or "Vertex"
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grid_level = 7 ## total number of AMR grid levels (Reduced from 9)
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static_grid_level = 4 ## number of AMR static grid levels (Reduced from 5)
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moving_grid_level = grid_level - static_grid_level ## number of AMR moving grid levels
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analysis_level = 0
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refinement_level = 3 ## time refinement start from this grid level
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largest_box_xyz_max = [320.0, 320.0, 320.0] ## scale of the largest box
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## not ne cess ary to be cubic for "Patch" grid s tructure
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## need to be a cubic box for "Shell-Patch" grid structure
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largest_box_xyz_min = - numpy.array(largest_box_xyz_max)
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static_grid_number = 48 ## grid points of each static AMR grid (in x direction) (Reduced from 96)
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## (grid points in y and z directions are automatically adjusted)
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moving_grid_number = 24 ## grid points of each moving AMR grid (Reduced from 48)
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shell_grid_number = [32, 32, 100] ## grid points of Shell-Patch grid
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## in (phi, theta, r) direction
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devide_factor = 2.0 ## resolution between different grid levels dh0/dh1, only support 2.0 now
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static_grid_type = 'Linear' ## AMR static grid structure , only supports "Linear"
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moving_grid_type = 'Linear' ## AMR moving grid structure , only supports "Linear"
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quarter_sphere_number = 48 ## grid number of 1/4 s pher ical surface (Reduced from 96)
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## (which is needed for evaluating the spherical surface integral)
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#################################################
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#################################################
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## Setting the puncture information
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puncture_number = 2
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position_BH = numpy.zeros( (puncture_number, 3) )
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parameter_BH = numpy.zeros( (puncture_number, 3) )
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dimensionless_spin_BH = numpy.zeros( (puncture_number, 3) )
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momentum_BH = numpy.zeros( (puncture_number, 3) )
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puncture_data_set = "Manually" ## Method to give Puncture’s positions and momentum
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## choose "Manually" or "Automatically-BBH"
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## Prefer to choose "Manually", because "Automatically-BBH" is developing now
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## initial orbital distance and ellipticity for BBHs system
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## ( needed for "Automatically-BBH" case , not affect the "Manually" case )
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Distance = 10.0
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e0 = 0.0
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## black hole parameter (M Q* a*)
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parameter_BH[0] = [ 36.0/(36.0+29.0), 0.0, +0.31 ]
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parameter_BH[1] = [ 29.0/(36.0+29.0), 0.0, -0.46 ]
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## dimensionless spin in each direction
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dimensionless_spin_BH[0] = [ 0.0, 0.0, +0.31 ]
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dimensionless_spin_BH[1] = [ 0.0, 0.0, -0.46 ]
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## use Brugmann's convention
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## -----0-----> y
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## - +
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#---------------------------------------------
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## If puncture_data_set is chosen to be "Manually", it is necessary to set the position and momentum of each puncture manually
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## initial position for each puncture
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position_BH[0] = [ 0.0, 10.0*29.0/(36.0+29.0), 0.0 ]
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position_BH[1] = [ 0.0, -10.0*36.0/(36.0+29.0), 0.0 ]
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## initial mumentum for each puncture
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## (needed for "Manually" case, does not affect the "Automatically-BBH" case)
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momentum_BH[0] = [ -0.09530152296974252, -0.00084541526517121, 0.0 ]
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momentum_BH[1] = [ +0.09530152296974252, +0.00084541526517121, 0.0 ]
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#################################################
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#################################################
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## Setting the gravitational wave information
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GW_L_max = 4 ## maximal L number in gravitational wave
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GW_M_max = 4 ## maximal M number in gravitational wave
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Detector_Number = 12 ## number of dector
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Detector_Rmin = 50.0 ## nearest dector distance
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Detector_Rmax = 160.0 ## farest dector distance
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#################################################
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#################################################
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## Setting the apprent horizon
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AHF_Find = "no" ## whether to find the apparent horizon: choose "yes" or "no"
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AHF_Find_Every = 24
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AHF_Dump_Time = 20.0
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#################################################
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#################################################
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## Other parameters (testing)
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## Only influence the Equation_Class = "BSSN-EScalar" case
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FR_a2 = 3.0 ## f(R) = R + a2 * R^2
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FR_l2 = 10000.0
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FR_phi0 = 0.00005
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FR_r0 = 120.0
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FR_sigma0 = 8.0
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FR_Choice = 2 ## Choice options: 1 2 3 4 5
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## 1: phi(r) = phi0 * Exp(-(r-r0)**2/sigma0)
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## V(r) = 0
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## 2: phi(r) = phi0 * a2^2/(1+a2^2)
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## V(r) = Exp(-8*Sqrt(PI/3)*phi(r)) * (1-Exp(4*Sqrt(PI/3)*phi(r)))**2 / (32*PI*a2)
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## 3: Schrodinger-Newton gived by system phi(r)
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## V(r) = Exp(-8*Sqrt(PI/3)*phi(r)) * (1-Exp(4*Sqrt(PI/3)*phi(r)))**2 / (32*PI*a2)
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## 4: phi(r) = phi0 * 0.5 * ( tanh((r+r0)/sigma0) - tanh((r-r0)/sigma0) )
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## V(r) = 0
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## f(R) = R + a2*R^2 with a2 = +oo
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## 5: phi(r) = phi0 * Exp(-(r-r0)**2/sigma)
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## V(r) = 0
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#################################################
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#################################################
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## Other parameters (testing)
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## (please do not change if not necessary)
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boundary_choice = "BAM-choice" ## Sommerfeld boundary condition : choose "BAM-choice" or "Shibata-choice"
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## prefer "BAM-choice"
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gauge_choice = 0 ## gauge choice
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## 0: B^i gauge
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## 1: David's puncture gauge
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## 2: MB B^i gauge
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## 3: RIT B^i gauge
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## 4: MB beta gauge
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## 5: RIT beta gauge
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## 6: MGB1 B^i gauge
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## 7: MGB2 B^i gauge
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## prefer 0 or 1
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tetrad_type = 2 ## tetradtype
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## v:r; u: phi; w: theta
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## v^a = (x,y,z)
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## 0: orthonormal order: v,u,w
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## v^a = (x,y,z)
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## m = (phi - i theta)/sqrt(2)
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## following Frans, Eq.(8) of PRD 75, 124018(2007)
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## 1: orthonormal order: w,u,v
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## m = (theta + i phi)/sqrt(2)
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## following Sperhake, Eq.(3.2) of PRD 85, 124062(2012)
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## 2: orthonormal order: v,u,w
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## v_a = (x,y,z)
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## m = (phi - i theta)/sqrt(2)
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## following Frans, Eq.(8) of PRD 75, 124018(2007)
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## this version recommend set to 2
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## prefer 2
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#################################################
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224
AMSS_NCKU_MiniProgram.py
Normal file
224
AMSS_NCKU_MiniProgram.py
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@@ -0,0 +1,224 @@
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##################################################################
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##
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## AMSS-NCKU Numerical Relativity Mini Test Program
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## Author: Assistant (based on Xiaoqu's code)
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## 2026/01/20
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##
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## This script runs a scaled-down version of the GW150914 test case
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## suitable for laptop testing.
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##
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##################################################################
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import os
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import shutil
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import sys
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import time
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# --- Context Manager for Input File Swapping ---
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class InputFileSwapper:
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def __init__(self, mini_file="AMSS_NCKU_Input_Mini.py", target_file="AMSS_NCKU_Input.py"):
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self.mini_file = mini_file
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self.target_file = target_file
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self.backup_file = target_file + ".bak"
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self.swapped = False
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def __enter__(self):
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print(f"[MiniProgram] Swapping {self.target_file} with {self.mini_file}...")
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if os.path.exists(self.target_file):
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shutil.move(self.target_file, self.backup_file)
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shutil.copy(self.mini_file, self.target_file)
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self.swapped = True
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return self
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def __exit__(self, exc_type, exc_value, traceback):
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if self.swapped:
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print(f"[MiniProgram] Restoring original {self.target_file}...")
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os.remove(self.target_file)
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if os.path.exists(self.backup_file):
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shutil.move(self.backup_file, self.target_file)
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def main():
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# Use the swapper to ensure all imported modules see the mini configuration
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with InputFileSwapper():
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# Import modules AFTER swapping input file
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try:
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import AMSS_NCKU_Input as input_data
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import print_information
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import setup
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import numerical_grid
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import generate_macrodef
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import makefile_and_run
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import generate_TwoPuncture_input
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import renew_puncture_parameter
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import plot_xiaoqu
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import plot_GW_strain_amplitude_xiaoqu
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except ImportError as e:
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print(f"Error importing modules: {e}")
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return
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print_information.print_program_introduction()
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print("\n" + "#"*60)
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print(" RUNNING MINI TEST CASE: GW150914-mini")
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print("#"*60 + "\n")
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# --- Directory Setup ---
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File_directory = os.path.join(input_data.File_directory)
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if os.path.exists(File_directory):
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print(f" Output directory '{File_directory}' exists. Removing for mini test...")
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shutil.rmtree(File_directory, ignore_errors=True)
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os.mkdir(File_directory)
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shutil.copy("AMSS_NCKU_Input.py", File_directory) # Copies the current (mini) input
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output_directory = os.path.join(File_directory, "AMSS_NCKU_output")
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os.mkdir(output_directory)
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binary_results_directory = os.path.join(output_directory, input_data.Output_directory)
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os.mkdir(binary_results_directory)
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figure_directory = os.path.join(File_directory, "figure")
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os.mkdir(figure_directory)
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print(" Output directories generated.\n")
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# --- Setup and Input Generation ---
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setup.print_input_data(File_directory)
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setup.generate_AMSSNCKU_input()
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setup.print_puncture_information()
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print("\n Generating AMSS-NCKU input parfile...")
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numerical_grid.append_AMSSNCKU_cgh_input()
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print("\n Plotting initial grid...")
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numerical_grid.plot_initial_grid()
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print("\n Generating macro files...")
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generate_macrodef.generate_macrodef_h()
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generate_macrodef.generate_macrodef_fh()
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# --- Compilation Preparation ---
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print("\n Preparing to compile and run...")
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AMSS_NCKU_source_path = "AMSS_NCKU_source"
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AMSS_NCKU_source_copy = os.path.join(File_directory, "AMSS_NCKU_source_copy")
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if not os.path.exists(AMSS_NCKU_source_path):
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print(" Error: AMSS_NCKU_source not found! Please run in the project root.")
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return
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shutil.copytree(AMSS_NCKU_source_path, AMSS_NCKU_source_copy)
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macrodef_h_path = os.path.join(File_directory, "macrodef.h")
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macrodef_fh_path = os.path.join(File_directory, "macrodef.fh")
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shutil.copy2(macrodef_h_path, AMSS_NCKU_source_copy)
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shutil.copy2(macrodef_fh_path, AMSS_NCKU_source_copy)
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# --- Compilation ---
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cwd = os.getcwd()
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os.chdir(AMSS_NCKU_source_copy)
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print(" Compiling ABE...")
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makefile_and_run.makefile_ABE()
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if (input_data.Initial_Data_Method == "Ansorg-TwoPuncture" ):
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print(" Compiling TwoPunctureABE...")
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makefile_and_run.makefile_TwoPunctureABE()
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os.chdir(cwd)
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# --- Copy Executables ---
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if (input_data.GPU_Calculation == "no"):
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ABE_file = os.path.join(AMSS_NCKU_source_copy, "ABE")
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else:
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ABE_file = os.path.join(AMSS_NCKU_source_copy, "ABEGPU")
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if not os.path.exists(ABE_file):
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print(" Error: ABE executable compilation failed.")
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return
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shutil.copy2(ABE_file, output_directory)
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TwoPuncture_file = os.path.join(AMSS_NCKU_source_copy, "TwoPunctureABE")
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if (input_data.Initial_Data_Method == "Ansorg-TwoPuncture" ):
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if not os.path.exists(TwoPuncture_file):
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print(" Error: TwoPunctureABE compilation failed.")
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return
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shutil.copy2(TwoPuncture_file, output_directory)
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# --- Execution ---
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start_time = time.time()
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if (input_data.Initial_Data_Method == "Ansorg-TwoPuncture" ):
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print("\n Generating TwoPuncture input...")
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generate_TwoPuncture_input.generate_AMSSNCKU_TwoPuncture_input()
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|
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AMSS_NCKU_TwoPuncture_inputfile = 'AMSS-NCKU-TwoPuncture.input'
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AMSS_NCKU_TwoPuncture_inputfile_path = os.path.join( File_directory, AMSS_NCKU_TwoPuncture_inputfile )
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shutil.copy2( AMSS_NCKU_TwoPuncture_inputfile_path, os.path.join(output_directory, 'TwoPunctureinput.par') )
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||||
|
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print(" Running TwoPunctureABE...")
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os.chdir(output_directory)
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makefile_and_run.run_TwoPunctureABE()
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os.chdir(cwd)
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||||
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||||
# Update Puncture Parameter
|
||||
renew_puncture_parameter.append_AMSSNCKU_BSSN_input(File_directory, output_directory)
|
||||
|
||||
AMSS_NCKU_inputfile = 'AMSS-NCKU.input'
|
||||
AMSS_NCKU_inputfile_path = os.path.join(File_directory, AMSS_NCKU_inputfile)
|
||||
shutil.copy2( AMSS_NCKU_inputfile_path, os.path.join(output_directory, 'input.par') )
|
||||
|
||||
print("\n Input files ready. Launching ABE...")
|
||||
|
||||
os.chdir(output_directory)
|
||||
makefile_and_run.run_ABE()
|
||||
os.chdir(cwd)
|
||||
|
||||
end_time = time.time()
|
||||
elapsed_time = end_time - start_time
|
||||
|
||||
# --- Post-processing ---
|
||||
print("\n Copying output files for inspection...")
|
||||
AMSS_NCKU_error_file_path = os.path.join(binary_results_directory, "setting.par")
|
||||
if os.path.exists(AMSS_NCKU_error_file_path):
|
||||
shutil.copy( AMSS_NCKU_error_file_path, os.path.join(output_directory, "AMSSNCKU_setting_parameter") )
|
||||
|
||||
AMSS_NCKU_error_file_path = os.path.join(binary_results_directory, "Error.log")
|
||||
if os.path.exists(AMSS_NCKU_error_file_path):
|
||||
shutil.copy( AMSS_NCKU_error_file_path, os.path.join(output_directory, "Error.log") )
|
||||
|
||||
for fname in ["bssn_BH.dat", "bssn_ADMQs.dat", "bssn_psi4.dat", "bssn_constraint.dat"]:
|
||||
fpath = os.path.join(binary_results_directory, fname)
|
||||
if os.path.exists(fpath):
|
||||
shutil.copy(fpath, os.path.join(output_directory, fname))
|
||||
|
||||
# --- Plotting ---
|
||||
print("\n Plotting results...")
|
||||
try:
|
||||
plot_xiaoqu.generate_puncture_orbit_plot( binary_results_directory, figure_directory )
|
||||
plot_xiaoqu.generate_puncture_orbit_plot3D( binary_results_directory, figure_directory )
|
||||
plot_xiaoqu.generate_puncture_distence_plot( binary_results_directory, figure_directory )
|
||||
|
||||
for i in range(input_data.Detector_Number):
|
||||
plot_xiaoqu.generate_gravitational_wave_psi4_plot( binary_results_directory, figure_directory, i )
|
||||
plot_GW_strain_amplitude_xiaoqu.generate_gravitational_wave_amplitude_plot( binary_results_directory, figure_directory, i )
|
||||
|
||||
for i in range(input_data.Detector_Number):
|
||||
plot_xiaoqu.generate_ADMmass_plot( binary_results_directory, figure_directory, i )
|
||||
|
||||
for i in range(input_data.grid_level):
|
||||
plot_xiaoqu.generate_constraint_check_plot( binary_results_directory, figure_directory, i )
|
||||
|
||||
plot_xiaoqu.generate_binary_data_plot( binary_results_directory, figure_directory )
|
||||
except Exception as e:
|
||||
print(f"Warning: Plotting failed: {e}")
|
||||
|
||||
print(f"\n Program Cost = {elapsed_time:.2f} Seconds \n")
|
||||
print(" AMSS-NCKU-Python simulation finished (Mini Test).\n")
|
||||
|
||||
if __name__ == "__main__":
|
||||
main()
|
||||
279
AMSS_NCKU_Verify_ASC26.py
Normal file
279
AMSS_NCKU_Verify_ASC26.py
Normal file
@@ -0,0 +1,279 @@
|
||||
#!/usr/bin/env python3
|
||||
"""
|
||||
AMSS-NCKU GW150914 Simulation Regression Test Script
|
||||
|
||||
Verification Requirements:
|
||||
1. XY-plane trajectory RMS error < 1% (Optimized vs. baseline, max of BH1 and BH2)
|
||||
2. ADM constraint violation < 2 (Grid Level 0)
|
||||
|
||||
RMS Calculation Method:
|
||||
- Computes trajectory deviation on the XY plane independently for BH1 and BH2
|
||||
- For each black hole: RMS = sqrt((1/M) * sum((Δr_i / r_i^max)^2)) × 100%
|
||||
- Final RMS = max(RMS_BH1, RMS_BH2)
|
||||
|
||||
Usage: python3 AMSS_NCKU_Verify_ASC26.py [output_dir]
|
||||
Default: output_dir = GW150914/AMSS_NCKU_output
|
||||
Reference: GW150914-origin (baseline simulation)
|
||||
"""
|
||||
|
||||
import numpy as np
|
||||
import sys
|
||||
import os
|
||||
|
||||
# ANSI Color Codes
|
||||
class Color:
|
||||
GREEN = '\033[92m'
|
||||
RED = '\033[91m'
|
||||
YELLOW = '\033[93m'
|
||||
BLUE = '\033[94m'
|
||||
BOLD = '\033[1m'
|
||||
RESET = '\033[0m'
|
||||
|
||||
def get_status_text(passed):
|
||||
if passed:
|
||||
return f"{Color.GREEN}{Color.BOLD}PASS{Color.RESET}"
|
||||
else:
|
||||
return f"{Color.RED}{Color.BOLD}FAIL{Color.RESET}"
|
||||
|
||||
def load_bh_trajectory(filepath):
|
||||
"""Load black hole trajectory data"""
|
||||
data = np.loadtxt(filepath)
|
||||
return {
|
||||
'time': data[:, 0],
|
||||
'x1': data[:, 1], 'y1': data[:, 2], 'z1': data[:, 3],
|
||||
'x2': data[:, 4], 'y2': data[:, 5], 'z2': data[:, 6]
|
||||
}
|
||||
|
||||
|
||||
def load_constraint_data(filepath):
|
||||
"""Load constraint violation data"""
|
||||
data = []
|
||||
with open(filepath, 'r') as f:
|
||||
for line in f:
|
||||
if line.startswith('#'):
|
||||
continue
|
||||
parts = line.split()
|
||||
if len(parts) >= 8:
|
||||
data.append([float(x) for x in parts[:8]])
|
||||
return np.array(data)
|
||||
|
||||
|
||||
def calculate_rms_error(bh_data_ref, bh_data_target):
|
||||
"""
|
||||
Calculate trajectory-based RMS error on the XY plane between baseline and optimized simulations.
|
||||
|
||||
This function computes the RMS error independently for BH1 and BH2 trajectories,
|
||||
then returns the maximum of the two as the final RMS error metric.
|
||||
|
||||
For each black hole, the RMS is calculated as:
|
||||
RMS = sqrt( (1/M) * sum( (Δr_i / r_i^max)^2 ) ) × 100%
|
||||
|
||||
where:
|
||||
Δr_i = sqrt((x_ref,i - x_new,i)^2 + (y_ref,i - y_new,i)^2)
|
||||
r_i^max = max(sqrt(x_ref,i^2 + y_ref,i^2), sqrt(x_new,i^2 + y_new,i^2))
|
||||
|
||||
Args:
|
||||
bh_data_ref: Reference (baseline) trajectory data
|
||||
bh_data_target: Target (optimized) trajectory data
|
||||
|
||||
Returns:
|
||||
rms_value: Final RMS error as a percentage (max of BH1 and BH2)
|
||||
error: Error message if any
|
||||
"""
|
||||
# Align data: truncate to the length of the shorter dataset
|
||||
M = min(len(bh_data_ref['time']), len(bh_data_target['time']))
|
||||
|
||||
if M < 10:
|
||||
return None, "Insufficient data points for comparison"
|
||||
|
||||
# Extract XY coordinates for both black holes
|
||||
x1_ref = bh_data_ref['x1'][:M]
|
||||
y1_ref = bh_data_ref['y1'][:M]
|
||||
x2_ref = bh_data_ref['x2'][:M]
|
||||
y2_ref = bh_data_ref['y2'][:M]
|
||||
|
||||
x1_new = bh_data_target['x1'][:M]
|
||||
y1_new = bh_data_target['y1'][:M]
|
||||
x2_new = bh_data_target['x2'][:M]
|
||||
y2_new = bh_data_target['y2'][:M]
|
||||
|
||||
# Calculate RMS for BH1
|
||||
delta_r1 = np.sqrt((x1_ref - x1_new)**2 + (y1_ref - y1_new)**2)
|
||||
r1_ref = np.sqrt(x1_ref**2 + y1_ref**2)
|
||||
r1_new = np.sqrt(x1_new**2 + y1_new**2)
|
||||
r1_max = np.maximum(r1_ref, r1_new)
|
||||
|
||||
# Calculate RMS for BH2
|
||||
delta_r2 = np.sqrt((x2_ref - x2_new)**2 + (y2_ref - y2_new)**2)
|
||||
r2_ref = np.sqrt(x2_ref**2 + y2_ref**2)
|
||||
r2_new = np.sqrt(x2_new**2 + y2_new**2)
|
||||
r2_max = np.maximum(r2_ref, r2_new)
|
||||
|
||||
# Avoid division by zero for BH1
|
||||
valid_mask1 = r1_max > 1e-15
|
||||
if np.sum(valid_mask1) < 10:
|
||||
return None, "Insufficient valid data points for BH1"
|
||||
|
||||
terms1 = (delta_r1[valid_mask1] / r1_max[valid_mask1])**2
|
||||
rms_bh1 = np.sqrt(np.mean(terms1)) * 100
|
||||
|
||||
# Avoid division by zero for BH2
|
||||
valid_mask2 = r2_max > 1e-15
|
||||
if np.sum(valid_mask2) < 10:
|
||||
return None, "Insufficient valid data points for BH2"
|
||||
|
||||
terms2 = (delta_r2[valid_mask2] / r2_max[valid_mask2])**2
|
||||
rms_bh2 = np.sqrt(np.mean(terms2)) * 100
|
||||
|
||||
# Final RMS is the maximum of BH1 and BH2
|
||||
rms_final = max(rms_bh1, rms_bh2)
|
||||
|
||||
return rms_final, None
|
||||
|
||||
|
||||
def analyze_constraint_violation(constraint_data, n_levels=9):
|
||||
"""
|
||||
Analyze ADM constraint violation
|
||||
Return maximum constraint violation for Grid Level 0
|
||||
"""
|
||||
# Extract Grid Level 0 data (first entry for each time step)
|
||||
level0_data = constraint_data[::n_levels]
|
||||
|
||||
# Calculate maximum absolute value for each constraint
|
||||
results = {
|
||||
'Ham': np.max(np.abs(level0_data[:, 1])),
|
||||
'Px': np.max(np.abs(level0_data[:, 2])),
|
||||
'Py': np.max(np.abs(level0_data[:, 3])),
|
||||
'Pz': np.max(np.abs(level0_data[:, 4])),
|
||||
'Gx': np.max(np.abs(level0_data[:, 5])),
|
||||
'Gy': np.max(np.abs(level0_data[:, 6])),
|
||||
'Gz': np.max(np.abs(level0_data[:, 7]))
|
||||
}
|
||||
|
||||
results['max_violation'] = max(results.values())
|
||||
return results
|
||||
|
||||
|
||||
def print_header():
|
||||
"""Print report header"""
|
||||
print("\n" + Color.BLUE + Color.BOLD + "=" * 65 + Color.RESET)
|
||||
print(Color.BOLD + " AMSS-NCKU GW150914 Simulation Regression Test Report" + Color.RESET)
|
||||
print(Color.BLUE + Color.BOLD + "=" * 65 + Color.RESET)
|
||||
|
||||
|
||||
def print_rms_results(rms_rel, error, threshold=1.0):
|
||||
"""Print RMS error results"""
|
||||
print(f"\n{Color.BOLD}1. RMS Error Analysis (Baseline vs Optimized){Color.RESET}")
|
||||
print("-" * 45)
|
||||
|
||||
if error:
|
||||
print(f" {Color.RED}Error: {error}{Color.RESET}")
|
||||
return False
|
||||
|
||||
passed = rms_rel < threshold
|
||||
|
||||
print(f" RMS relative error: {rms_rel:.4f}%")
|
||||
print(f" Requirement: < {threshold}%")
|
||||
print(f" Status: {get_status_text(passed)}")
|
||||
|
||||
return passed
|
||||
|
||||
|
||||
def print_constraint_results(results, threshold=2.0):
|
||||
"""Print constraint violation results"""
|
||||
print(f"\n{Color.BOLD}2. ADM Constraint Violation Analysis (Grid Level 0){Color.RESET}")
|
||||
print("-" * 45)
|
||||
|
||||
names = ['Ham', 'Px', 'Py', 'Pz', 'Gx', 'Gy', 'Gz']
|
||||
for i, name in enumerate(names):
|
||||
print(f" Max |{name:3}|: {results[name]:.6f}", end=" ")
|
||||
if (i + 1) % 2 == 0: print()
|
||||
if len(names) % 2 != 0: print()
|
||||
|
||||
passed = results['max_violation'] < threshold
|
||||
|
||||
print(f"\n Maximum violation: {results['max_violation']:.6f}")
|
||||
print(f" Requirement: < {threshold}")
|
||||
print(f" Status: {get_status_text(passed)}")
|
||||
|
||||
return passed
|
||||
|
||||
|
||||
def print_summary(rms_passed, constraint_passed):
|
||||
"""Print summary"""
|
||||
print("\n" + Color.BLUE + Color.BOLD + "=" * 65 + Color.RESET)
|
||||
print(Color.BOLD + "Verification Summary" + Color.RESET)
|
||||
print(Color.BLUE + Color.BOLD + "=" * 65 + Color.RESET)
|
||||
|
||||
all_passed = rms_passed and constraint_passed
|
||||
|
||||
res_rms = get_status_text(rms_passed)
|
||||
res_con = get_status_text(constraint_passed)
|
||||
|
||||
print(f" [1] RMS trajectory check: {res_rms}")
|
||||
print(f" [2] ADM constraint check: {res_con}")
|
||||
|
||||
final_status = f"{Color.GREEN}{Color.BOLD}ALL CHECKS PASSED{Color.RESET}" if all_passed else f"{Color.RED}{Color.BOLD}SOME CHECKS FAILED{Color.RESET}"
|
||||
print(f"\n Overall result: {final_status}")
|
||||
print(Color.BLUE + Color.BOLD + "=" * 65 + Color.RESET + "\n")
|
||||
|
||||
return all_passed
|
||||
|
||||
|
||||
def main():
|
||||
# Determine target (optimized) output directory
|
||||
if len(sys.argv) > 1:
|
||||
target_dir = sys.argv[1]
|
||||
else:
|
||||
script_dir = os.path.dirname(os.path.abspath(__file__))
|
||||
target_dir = os.path.join(script_dir, "GW150914/AMSS_NCKU_output")
|
||||
|
||||
# Determine reference (baseline) directory
|
||||
script_dir = os.path.dirname(os.path.abspath(__file__))
|
||||
reference_dir = os.path.join(script_dir, "GW150914-origin/AMSS_NCKU_output")
|
||||
|
||||
# Data file paths
|
||||
bh_file_ref = os.path.join(reference_dir, "bssn_BH.dat")
|
||||
bh_file_target = os.path.join(target_dir, "bssn_BH.dat")
|
||||
constraint_file = os.path.join(target_dir, "bssn_constraint.dat")
|
||||
|
||||
# Check if files exist
|
||||
if not os.path.exists(bh_file_ref):
|
||||
print(f"{Color.RED}{Color.BOLD}Error:{Color.RESET} Baseline trajectory file not found: {bh_file_ref}")
|
||||
sys.exit(1)
|
||||
|
||||
if not os.path.exists(bh_file_target):
|
||||
print(f"{Color.RED}{Color.BOLD}Error:{Color.RESET} Target trajectory file not found: {bh_file_target}")
|
||||
sys.exit(1)
|
||||
|
||||
if not os.path.exists(constraint_file):
|
||||
print(f"{Color.RED}{Color.BOLD}Error:{Color.RESET} Constraint data file not found: {constraint_file}")
|
||||
sys.exit(1)
|
||||
|
||||
# Print header
|
||||
print_header()
|
||||
print(f"\n{Color.BOLD}Reference (Baseline):{Color.RESET} {Color.BLUE}{reference_dir}{Color.RESET}")
|
||||
print(f"{Color.BOLD}Target (Optimized): {Color.RESET} {Color.BLUE}{target_dir}{Color.RESET}")
|
||||
|
||||
# Load data
|
||||
bh_data_ref = load_bh_trajectory(bh_file_ref)
|
||||
bh_data_target = load_bh_trajectory(bh_file_target)
|
||||
constraint_data = load_constraint_data(constraint_file)
|
||||
|
||||
# Calculate RMS error
|
||||
rms_rel, error = calculate_rms_error(bh_data_ref, bh_data_target)
|
||||
rms_passed = print_rms_results(rms_rel, error)
|
||||
|
||||
# Analyze constraint violation
|
||||
constraint_results = analyze_constraint_violation(constraint_data)
|
||||
constraint_passed = print_constraint_results(constraint_results)
|
||||
|
||||
# Print summary
|
||||
all_passed = print_summary(rms_passed, constraint_passed)
|
||||
|
||||
# Return exit code
|
||||
sys.exit(0 if all_passed else 1)
|
||||
|
||||
|
||||
if __name__ == "__main__":
|
||||
main()
|
||||
@@ -37,57 +37,51 @@ close(77)
|
||||
end program checkFFT
|
||||
#endif
|
||||
|
||||
!-------------
|
||||
! Optimized FFT using Intel oneMKL DFTI
|
||||
! Mathematical equivalence: Standard DFT definition
|
||||
! Forward (isign=1): X[k] = sum_{n=0}^{N-1} x[n] * exp(-2*pi*i*k*n/N)
|
||||
! Backward (isign=-1): X[k] = sum_{n=0}^{N-1} x[n] * exp(+2*pi*i*k*n/N)
|
||||
! Input/Output: dataa is interleaved complex array [Re(0),Im(0),Re(1),Im(1),...]
|
||||
!-------------
|
||||
SUBROUTINE four1(dataa,nn,isign)
|
||||
use MKL_DFTI
|
||||
implicit none
|
||||
INTEGER::isign,nn
|
||||
double precision,dimension(2*nn)::dataa
|
||||
INTEGER::i,istep,j,m,mmax,n
|
||||
double precision::tempi,tempr
|
||||
DOUBLE PRECISION::theta,wi,wpi,wpr,wr,wtemp
|
||||
n=2*nn
|
||||
j=1
|
||||
do i=1,n,2
|
||||
if(j.gt.i)then
|
||||
tempr=dataa(j)
|
||||
tempi=dataa(j+1)
|
||||
dataa(j)=dataa(i)
|
||||
dataa(j+1)=dataa(i+1)
|
||||
dataa(i)=tempr
|
||||
dataa(i+1)=tempi
|
||||
endif
|
||||
m=nn
|
||||
1 if ((m.ge.2).and.(j.gt.m)) then
|
||||
j=j-m
|
||||
m=m/2
|
||||
goto 1
|
||||
endif
|
||||
j=j+m
|
||||
enddo
|
||||
mmax=2
|
||||
2 if (n.gt.mmax) then
|
||||
istep=2*mmax
|
||||
theta=6.28318530717959d0/(isign*mmax)
|
||||
wpr=-2.d0*sin(0.5d0*theta)**2
|
||||
wpi=sin(theta)
|
||||
wr=1.d0
|
||||
wi=0.d0
|
||||
do m=1,mmax,2
|
||||
do i=m,n,istep
|
||||
j=i+mmax
|
||||
tempr=sngl(wr)*dataa(j)-sngl(wi)*dataa(j+1)
|
||||
tempi=sngl(wr)*dataa(j+1)+sngl(wi)*dataa(j)
|
||||
dataa(j)=dataa(i)-tempr
|
||||
dataa(j+1)=dataa(i+1)-tempi
|
||||
dataa(i)=dataa(i)+tempr
|
||||
dataa(i+1)=dataa(i+1)+tempi
|
||||
enddo
|
||||
wtemp=wr
|
||||
wr=wr*wpr-wi*wpi+wr
|
||||
wi=wi*wpr+wtemp*wpi+wi
|
||||
enddo
|
||||
mmax=istep
|
||||
goto 2
|
||||
INTEGER, intent(in) :: isign, nn
|
||||
DOUBLE PRECISION, dimension(2*nn), intent(inout) :: dataa
|
||||
|
||||
type(DFTI_DESCRIPTOR), pointer :: desc
|
||||
integer :: status
|
||||
|
||||
! Create DFTI descriptor for 1D complex-to-complex transform
|
||||
status = DftiCreateDescriptor(desc, DFTI_DOUBLE, DFTI_COMPLEX, 1, nn)
|
||||
if (status /= 0) return
|
||||
|
||||
! Set input/output storage as interleaved complex (default)
|
||||
status = DftiSetValue(desc, DFTI_PLACEMENT, DFTI_INPLACE)
|
||||
if (status /= 0) then
|
||||
status = DftiFreeDescriptor(desc)
|
||||
return
|
||||
endif
|
||||
|
||||
! Commit the descriptor
|
||||
status = DftiCommitDescriptor(desc)
|
||||
if (status /= 0) then
|
||||
status = DftiFreeDescriptor(desc)
|
||||
return
|
||||
endif
|
||||
|
||||
! Execute FFT based on direction
|
||||
if (isign == 1) then
|
||||
! Forward FFT: exp(-2*pi*i*k*n/N)
|
||||
status = DftiComputeForward(desc, dataa)
|
||||
else
|
||||
! Backward FFT: exp(+2*pi*i*k*n/N)
|
||||
status = DftiComputeBackward(desc, dataa)
|
||||
endif
|
||||
|
||||
! Free descriptor
|
||||
status = DftiFreeDescriptor(desc)
|
||||
|
||||
return
|
||||
END SUBROUTINE four1
|
||||
|
||||
@@ -313,7 +313,7 @@ MyList<Block> *Parallel::distribute(MyList<Patch> *PatchLIST, int cpusize, int i
|
||||
|
||||
int split_size, min_size, block_size = 0;
|
||||
|
||||
int min_width = 2 * Mymax(ghost_width, buffer_width);
|
||||
int min_width = Mymax(2 * ghost_width + 2, buffer_width + 2);
|
||||
int nxyz[dim], mmin_width[dim], min_shape[dim];
|
||||
|
||||
MyList<Patch> *PLi = PatchLIST;
|
||||
@@ -641,7 +641,7 @@ MyList<Block> *Parallel::distribute(MyList<Patch> *PatchLIST, int cpusize, int i
|
||||
|
||||
int split_size, min_size, block_size = 0;
|
||||
|
||||
int min_width = 2 * Mymax(ghost_width, buffer_width);
|
||||
int min_width = Mymax(2 * ghost_width + 2, buffer_width + 2);
|
||||
int nxyz[dim], mmin_width[dim], min_shape[dim];
|
||||
|
||||
MyList<Patch> *PLi = PatchLIST;
|
||||
|
||||
@@ -27,6 +27,7 @@ using namespace std;
|
||||
#endif
|
||||
|
||||
#include "TwoPunctures.h"
|
||||
#include <mkl_cblas.h>
|
||||
|
||||
TwoPunctures::TwoPunctures(double mp, double mm, double b,
|
||||
double P_plusx, double P_plusy, double P_plusz,
|
||||
@@ -891,25 +892,17 @@ double TwoPunctures::norm1(double *v, int n)
|
||||
/* -------------------------------------------------------------------------*/
|
||||
double TwoPunctures::norm2(double *v, int n)
|
||||
{
|
||||
int i;
|
||||
double result = 0;
|
||||
|
||||
for (i = 0; i < n; i++)
|
||||
result += v[i] * v[i];
|
||||
|
||||
return sqrt(result);
|
||||
// Optimized with oneMKL BLAS DNRM2
|
||||
// Computes: sqrt(sum(v[i]^2))
|
||||
return cblas_dnrm2(n, v, 1);
|
||||
}
|
||||
|
||||
/* -------------------------------------------------------------------------*/
|
||||
double TwoPunctures::scalarproduct(double *v, double *w, int n)
|
||||
{
|
||||
int i;
|
||||
double result = 0;
|
||||
|
||||
for (i = 0; i < n; i++)
|
||||
result += v[i] * w[i];
|
||||
|
||||
return result;
|
||||
// Optimized with oneMKL BLAS DDOT
|
||||
// Computes: sum(v[i] * w[i])
|
||||
return cblas_ddot(n, v, 1, w, 1);
|
||||
}
|
||||
|
||||
/* -------------------------------------------------------------------------*/
|
||||
|
||||
File diff suppressed because it is too large
Load Diff
@@ -1939,6 +1939,309 @@
|
||||
return
|
||||
|
||||
end subroutine fddyz
|
||||
subroutine fderivs_batch4(ex,f1,f2,f3,f4, &
|
||||
f1x,f1y,f1z,f2x,f2y,f2z,f3x,f3y,f3z,f4x,f4y,f4z, &
|
||||
X,Y,Z,SYM1,SYM2,SYM3,symmetry,onoff)
|
||||
implicit none
|
||||
|
||||
integer, intent(in ):: ex(1:3),symmetry,onoff
|
||||
real*8, dimension(ex(1),ex(2),ex(3)), intent(in ):: f1,f2,f3,f4
|
||||
real*8, dimension(ex(1),ex(2),ex(3)), intent(out):: f1x,f1y,f1z
|
||||
real*8, dimension(ex(1),ex(2),ex(3)), intent(out):: f2x,f2y,f2z
|
||||
real*8, dimension(ex(1),ex(2),ex(3)), intent(out):: f3x,f3y,f3z
|
||||
real*8, dimension(ex(1),ex(2),ex(3)), intent(out):: f4x,f4y,f4z
|
||||
real*8, intent(in) :: X(ex(1)),Y(ex(2)),Z(ex(3))
|
||||
real*8, intent(in ):: SYM1,SYM2,SYM3
|
||||
|
||||
!~~~~~~ other variables
|
||||
|
||||
real*8 :: dX,dY,dZ
|
||||
real*8,dimension(-1:ex(1),-1:ex(2),-1:ex(3)) :: fh1,fh2,fh3,fh4
|
||||
real*8, dimension(3) :: SoA
|
||||
integer :: imin,jmin,kmin,imax,jmax,kmax,i,j,k
|
||||
real*8 :: d12dx,d12dy,d12dz,d2dx,d2dy,d2dz
|
||||
integer, parameter :: NO_SYMM = 0, EQ_SYMM = 1, OCTANT = 2
|
||||
real*8, parameter :: ZEO=0.d0,ONE=1.d0
|
||||
real*8, parameter :: TWO=2.d0,EIT=8.d0
|
||||
real*8, parameter :: F12=1.2d1
|
||||
|
||||
dX = X(2)-X(1)
|
||||
dY = Y(2)-Y(1)
|
||||
dZ = Z(2)-Z(1)
|
||||
|
||||
imax = ex(1)
|
||||
jmax = ex(2)
|
||||
kmax = ex(3)
|
||||
|
||||
imin = 1
|
||||
jmin = 1
|
||||
kmin = 1
|
||||
if(Symmetry > NO_SYMM .and. dabs(Z(1)) < dZ) kmin = -1
|
||||
if(Symmetry > EQ_SYMM .and. dabs(X(1)) < dX) imin = -1
|
||||
if(Symmetry > EQ_SYMM .and. dabs(Y(1)) < dY) jmin = -1
|
||||
|
||||
SoA(1) = SYM1
|
||||
SoA(2) = SYM2
|
||||
SoA(3) = SYM3
|
||||
|
||||
call symmetry_bd(2,ex,f1,fh1,SoA)
|
||||
call symmetry_bd(2,ex,f2,fh2,SoA)
|
||||
call symmetry_bd(2,ex,f3,fh3,SoA)
|
||||
call symmetry_bd(2,ex,f4,fh4,SoA)
|
||||
|
||||
d12dx = ONE/F12/dX
|
||||
d12dy = ONE/F12/dY
|
||||
d12dz = ONE/F12/dZ
|
||||
|
||||
d2dx = ONE/TWO/dX
|
||||
d2dy = ONE/TWO/dY
|
||||
d2dz = ONE/TWO/dZ
|
||||
|
||||
f1x = ZEO; f1y = ZEO; f1z = ZEO
|
||||
f2x = ZEO; f2y = ZEO; f2z = ZEO
|
||||
f3x = ZEO; f3y = ZEO; f3z = ZEO
|
||||
f4x = ZEO; f4y = ZEO; f4z = ZEO
|
||||
|
||||
do k=1,ex(3)-1
|
||||
do j=1,ex(2)-1
|
||||
do i=1,ex(1)-1
|
||||
if(i+2 <= imax .and. i-2 >= imin .and. &
|
||||
j+2 <= jmax .and. j-2 >= jmin .and. &
|
||||
k+2 <= kmax .and. k-2 >= kmin) then
|
||||
f1x(i,j,k)=d12dx*(fh1(i-2,j,k)-EIT*fh1(i-1,j,k)+EIT*fh1(i+1,j,k)-fh1(i+2,j,k))
|
||||
f1y(i,j,k)=d12dy*(fh1(i,j-2,k)-EIT*fh1(i,j-1,k)+EIT*fh1(i,j+1,k)-fh1(i,j+2,k))
|
||||
f1z(i,j,k)=d12dz*(fh1(i,j,k-2)-EIT*fh1(i,j,k-1)+EIT*fh1(i,j,k+1)-fh1(i,j,k+2))
|
||||
|
||||
f2x(i,j,k)=d12dx*(fh2(i-2,j,k)-EIT*fh2(i-1,j,k)+EIT*fh2(i+1,j,k)-fh2(i+2,j,k))
|
||||
f2y(i,j,k)=d12dy*(fh2(i,j-2,k)-EIT*fh2(i,j-1,k)+EIT*fh2(i,j+1,k)-fh2(i,j+2,k))
|
||||
f2z(i,j,k)=d12dz*(fh2(i,j,k-2)-EIT*fh2(i,j,k-1)+EIT*fh2(i,j,k+1)-fh2(i,j,k+2))
|
||||
|
||||
f3x(i,j,k)=d12dx*(fh3(i-2,j,k)-EIT*fh3(i-1,j,k)+EIT*fh3(i+1,j,k)-fh3(i+2,j,k))
|
||||
f3y(i,j,k)=d12dy*(fh3(i,j-2,k)-EIT*fh3(i,j-1,k)+EIT*fh3(i,j+1,k)-fh3(i,j+2,k))
|
||||
f3z(i,j,k)=d12dz*(fh3(i,j,k-2)-EIT*fh3(i,j,k-1)+EIT*fh3(i,j,k+1)-fh3(i,j,k+2))
|
||||
|
||||
f4x(i,j,k)=d12dx*(fh4(i-2,j,k)-EIT*fh4(i-1,j,k)+EIT*fh4(i+1,j,k)-fh4(i+2,j,k))
|
||||
f4y(i,j,k)=d12dy*(fh4(i,j-2,k)-EIT*fh4(i,j-1,k)+EIT*fh4(i,j+1,k)-fh4(i,j+2,k))
|
||||
f4z(i,j,k)=d12dz*(fh4(i,j,k-2)-EIT*fh4(i,j,k-1)+EIT*fh4(i,j,k+1)-fh4(i,j,k+2))
|
||||
elseif(i+1 <= imax .and. i-1 >= imin .and. &
|
||||
j+1 <= jmax .and. j-1 >= jmin .and. &
|
||||
k+1 <= kmax .and. k-1 >= kmin) then
|
||||
f1x(i,j,k)=d2dx*(-fh1(i-1,j,k)+fh1(i+1,j,k))
|
||||
f1y(i,j,k)=d2dy*(-fh1(i,j-1,k)+fh1(i,j+1,k))
|
||||
f1z(i,j,k)=d2dz*(-fh1(i,j,k-1)+fh1(i,j,k+1))
|
||||
|
||||
f2x(i,j,k)=d2dx*(-fh2(i-1,j,k)+fh2(i+1,j,k))
|
||||
f2y(i,j,k)=d2dy*(-fh2(i,j-1,k)+fh2(i,j+1,k))
|
||||
f2z(i,j,k)=d2dz*(-fh2(i,j,k-1)+fh2(i,j,k+1))
|
||||
|
||||
f3x(i,j,k)=d2dx*(-fh3(i-1,j,k)+fh3(i+1,j,k))
|
||||
f3y(i,j,k)=d2dy*(-fh3(i,j-1,k)+fh3(i,j+1,k))
|
||||
f3z(i,j,k)=d2dz*(-fh3(i,j,k-1)+fh3(i,j,k+1))
|
||||
|
||||
f4x(i,j,k)=d2dx*(-fh4(i-1,j,k)+fh4(i+1,j,k))
|
||||
f4y(i,j,k)=d2dy*(-fh4(i,j-1,k)+fh4(i,j+1,k))
|
||||
f4z(i,j,k)=d2dz*(-fh4(i,j,k-1)+fh4(i,j,k+1))
|
||||
endif
|
||||
enddo
|
||||
enddo
|
||||
enddo
|
||||
|
||||
return
|
||||
|
||||
end subroutine fderivs_batch4
|
||||
!-----------------------------------------------------------------------------
|
||||
! batch first derivatives (3 fields), same symmetry setup
|
||||
!-----------------------------------------------------------------------------
|
||||
subroutine fderivs_batch3(ex,f1,f2,f3, &
|
||||
f1x,f1y,f1z,f2x,f2y,f2z,f3x,f3y,f3z, &
|
||||
X,Y,Z,SYM1,SYM2,SYM3,symmetry,onoff)
|
||||
implicit none
|
||||
|
||||
integer, intent(in ):: ex(1:3),symmetry,onoff
|
||||
real*8, dimension(ex(1),ex(2),ex(3)), intent(in ):: f1,f2,f3
|
||||
real*8, dimension(ex(1),ex(2),ex(3)), intent(out):: f1x,f1y,f1z
|
||||
real*8, dimension(ex(1),ex(2),ex(3)), intent(out):: f2x,f2y,f2z
|
||||
real*8, dimension(ex(1),ex(2),ex(3)), intent(out):: f3x,f3y,f3z
|
||||
real*8, intent(in) :: X(ex(1)),Y(ex(2)),Z(ex(3))
|
||||
real*8, intent(in ):: SYM1,SYM2,SYM3
|
||||
|
||||
!~~~~~~ other variables
|
||||
|
||||
real*8 :: dX,dY,dZ
|
||||
real*8,dimension(-1:ex(1),-1:ex(2),-1:ex(3)) :: fh1,fh2,fh3
|
||||
real*8, dimension(3) :: SoA
|
||||
integer :: imin,jmin,kmin,imax,jmax,kmax,i,j,k
|
||||
real*8 :: d12dx,d12dy,d12dz,d2dx,d2dy,d2dz
|
||||
integer, parameter :: NO_SYMM = 0, EQ_SYMM = 1, OCTANT = 2
|
||||
real*8, parameter :: ZEO=0.d0,ONE=1.d0
|
||||
real*8, parameter :: TWO=2.d0,EIT=8.d0
|
||||
real*8, parameter :: F12=1.2d1
|
||||
|
||||
dX = X(2)-X(1)
|
||||
dY = Y(2)-Y(1)
|
||||
dZ = Z(2)-Z(1)
|
||||
|
||||
imax = ex(1)
|
||||
jmax = ex(2)
|
||||
kmax = ex(3)
|
||||
|
||||
imin = 1
|
||||
jmin = 1
|
||||
kmin = 1
|
||||
if(Symmetry > NO_SYMM .and. dabs(Z(1)) < dZ) kmin = -1
|
||||
if(Symmetry > EQ_SYMM .and. dabs(X(1)) < dX) imin = -1
|
||||
if(Symmetry > EQ_SYMM .and. dabs(Y(1)) < dY) jmin = -1
|
||||
|
||||
SoA(1) = SYM1
|
||||
SoA(2) = SYM2
|
||||
SoA(3) = SYM3
|
||||
|
||||
call symmetry_bd(2,ex,f1,fh1,SoA)
|
||||
call symmetry_bd(2,ex,f2,fh2,SoA)
|
||||
call symmetry_bd(2,ex,f3,fh3,SoA)
|
||||
|
||||
d12dx = ONE/F12/dX
|
||||
d12dy = ONE/F12/dY
|
||||
d12dz = ONE/F12/dZ
|
||||
|
||||
d2dx = ONE/TWO/dX
|
||||
d2dy = ONE/TWO/dY
|
||||
d2dz = ONE/TWO/dZ
|
||||
|
||||
f1x = ZEO; f1y = ZEO; f1z = ZEO
|
||||
f2x = ZEO; f2y = ZEO; f2z = ZEO
|
||||
f3x = ZEO; f3y = ZEO; f3z = ZEO
|
||||
|
||||
do k=1,ex(3)-1
|
||||
do j=1,ex(2)-1
|
||||
do i=1,ex(1)-1
|
||||
if(i+2 <= imax .and. i-2 >= imin .and. &
|
||||
j+2 <= jmax .and. j-2 >= jmin .and. &
|
||||
k+2 <= kmax .and. k-2 >= kmin) then
|
||||
f1x(i,j,k)=d12dx*(fh1(i-2,j,k)-EIT*fh1(i-1,j,k)+EIT*fh1(i+1,j,k)-fh1(i+2,j,k))
|
||||
f1y(i,j,k)=d12dy*(fh1(i,j-2,k)-EIT*fh1(i,j-1,k)+EIT*fh1(i,j+1,k)-fh1(i,j+2,k))
|
||||
f1z(i,j,k)=d12dz*(fh1(i,j,k-2)-EIT*fh1(i,j,k-1)+EIT*fh1(i,j,k+1)-fh1(i,j,k+2))
|
||||
|
||||
f2x(i,j,k)=d12dx*(fh2(i-2,j,k)-EIT*fh2(i-1,j,k)+EIT*fh2(i+1,j,k)-fh2(i+2,j,k))
|
||||
f2y(i,j,k)=d12dy*(fh2(i,j-2,k)-EIT*fh2(i,j-1,k)+EIT*fh2(i,j+1,k)-fh2(i,j+2,k))
|
||||
f2z(i,j,k)=d12dz*(fh2(i,j,k-2)-EIT*fh2(i,j,k-1)+EIT*fh2(i,j,k+1)-fh2(i,j,k+2))
|
||||
|
||||
f3x(i,j,k)=d12dx*(fh3(i-2,j,k)-EIT*fh3(i-1,j,k)+EIT*fh3(i+1,j,k)-fh3(i+2,j,k))
|
||||
f3y(i,j,k)=d12dy*(fh3(i,j-2,k)-EIT*fh3(i,j-1,k)+EIT*fh3(i,j+1,k)-fh3(i,j+2,k))
|
||||
f3z(i,j,k)=d12dz*(fh3(i,j,k-2)-EIT*fh3(i,j,k-1)+EIT*fh3(i,j,k+1)-fh3(i,j,k+2))
|
||||
elseif(i+1 <= imax .and. i-1 >= imin .and. &
|
||||
j+1 <= jmax .and. j-1 >= jmin .and. &
|
||||
k+1 <= kmax .and. k-1 >= kmin) then
|
||||
f1x(i,j,k)=d2dx*(-fh1(i-1,j,k)+fh1(i+1,j,k))
|
||||
f1y(i,j,k)=d2dy*(-fh1(i,j-1,k)+fh1(i,j+1,k))
|
||||
f1z(i,j,k)=d2dz*(-fh1(i,j,k-1)+fh1(i,j,k+1))
|
||||
|
||||
f2x(i,j,k)=d2dx*(-fh2(i-1,j,k)+fh2(i+1,j,k))
|
||||
f2y(i,j,k)=d2dy*(-fh2(i,j-1,k)+fh2(i,j+1,k))
|
||||
f2z(i,j,k)=d2dz*(-fh2(i,j,k-1)+fh2(i,j,k+1))
|
||||
|
||||
f3x(i,j,k)=d2dx*(-fh3(i-1,j,k)+fh3(i+1,j,k))
|
||||
f3y(i,j,k)=d2dy*(-fh3(i,j-1,k)+fh3(i,j+1,k))
|
||||
f3z(i,j,k)=d2dz*(-fh3(i,j,k-1)+fh3(i,j,k+1))
|
||||
endif
|
||||
enddo
|
||||
enddo
|
||||
enddo
|
||||
|
||||
return
|
||||
|
||||
end subroutine fderivs_batch3
|
||||
!-----------------------------------------------------------------------------
|
||||
! batch first derivatives (2 fields), same symmetry setup
|
||||
!-----------------------------------------------------------------------------
|
||||
subroutine fderivs_batch2(ex,f1,f2, &
|
||||
f1x,f1y,f1z,f2x,f2y,f2z, &
|
||||
X,Y,Z,SYM1,SYM2,SYM3,symmetry,onoff)
|
||||
implicit none
|
||||
|
||||
integer, intent(in ):: ex(1:3),symmetry,onoff
|
||||
real*8, dimension(ex(1),ex(2),ex(3)), intent(in ):: f1,f2
|
||||
real*8, dimension(ex(1),ex(2),ex(3)), intent(out):: f1x,f1y,f1z
|
||||
real*8, dimension(ex(1),ex(2),ex(3)), intent(out):: f2x,f2y,f2z
|
||||
real*8, intent(in) :: X(ex(1)),Y(ex(2)),Z(ex(3))
|
||||
real*8, intent(in ):: SYM1,SYM2,SYM3
|
||||
|
||||
!~~~~~~ other variables
|
||||
|
||||
real*8 :: dX,dY,dZ
|
||||
real*8,dimension(-1:ex(1),-1:ex(2),-1:ex(3)) :: fh1,fh2
|
||||
real*8, dimension(3) :: SoA
|
||||
integer :: imin,jmin,kmin,imax,jmax,kmax,i,j,k
|
||||
real*8 :: d12dx,d12dy,d12dz,d2dx,d2dy,d2dz
|
||||
integer, parameter :: NO_SYMM = 0, EQ_SYMM = 1, OCTANT = 2
|
||||
real*8, parameter :: ZEO=0.d0,ONE=1.d0
|
||||
real*8, parameter :: TWO=2.d0,EIT=8.d0
|
||||
real*8, parameter :: F12=1.2d1
|
||||
|
||||
dX = X(2)-X(1)
|
||||
dY = Y(2)-Y(1)
|
||||
dZ = Z(2)-Z(1)
|
||||
|
||||
imax = ex(1)
|
||||
jmax = ex(2)
|
||||
kmax = ex(3)
|
||||
|
||||
imin = 1
|
||||
jmin = 1
|
||||
kmin = 1
|
||||
if(Symmetry > NO_SYMM .and. dabs(Z(1)) < dZ) kmin = -1
|
||||
if(Symmetry > EQ_SYMM .and. dabs(X(1)) < dX) imin = -1
|
||||
if(Symmetry > EQ_SYMM .and. dabs(Y(1)) < dY) jmin = -1
|
||||
|
||||
SoA(1) = SYM1
|
||||
SoA(2) = SYM2
|
||||
SoA(3) = SYM3
|
||||
|
||||
call symmetry_bd(2,ex,f1,fh1,SoA)
|
||||
call symmetry_bd(2,ex,f2,fh2,SoA)
|
||||
|
||||
d12dx = ONE/F12/dX
|
||||
d12dy = ONE/F12/dY
|
||||
d12dz = ONE/F12/dZ
|
||||
|
||||
d2dx = ONE/TWO/dX
|
||||
d2dy = ONE/TWO/dY
|
||||
d2dz = ONE/TWO/dZ
|
||||
|
||||
f1x = ZEO; f1y = ZEO; f1z = ZEO
|
||||
f2x = ZEO; f2y = ZEO; f2z = ZEO
|
||||
|
||||
do k=1,ex(3)-1
|
||||
do j=1,ex(2)-1
|
||||
do i=1,ex(1)-1
|
||||
if(i+2 <= imax .and. i-2 >= imin .and. &
|
||||
j+2 <= jmax .and. j-2 >= jmin .and. &
|
||||
k+2 <= kmax .and. k-2 >= kmin) then
|
||||
f1x(i,j,k)=d12dx*(fh1(i-2,j,k)-EIT*fh1(i-1,j,k)+EIT*fh1(i+1,j,k)-fh1(i+2,j,k))
|
||||
f1y(i,j,k)=d12dy*(fh1(i,j-2,k)-EIT*fh1(i,j-1,k)+EIT*fh1(i,j+1,k)-fh1(i,j+2,k))
|
||||
f1z(i,j,k)=d12dz*(fh1(i,j,k-2)-EIT*fh1(i,j,k-1)+EIT*fh1(i,j,k+1)-fh1(i,j,k+2))
|
||||
|
||||
f2x(i,j,k)=d12dx*(fh2(i-2,j,k)-EIT*fh2(i-1,j,k)+EIT*fh2(i+1,j,k)-fh2(i+2,j,k))
|
||||
f2y(i,j,k)=d12dy*(fh2(i,j-2,k)-EIT*fh2(i,j-1,k)+EIT*fh2(i,j+1,k)-fh2(i,j+2,k))
|
||||
f2z(i,j,k)=d12dz*(fh2(i,j,k-2)-EIT*fh2(i,j,k-1)+EIT*fh2(i,j,k+1)-fh2(i,j,k+2))
|
||||
elseif(i+1 <= imax .and. i-1 >= imin .and. &
|
||||
j+1 <= jmax .and. j-1 >= jmin .and. &
|
||||
k+1 <= kmax .and. k-1 >= kmin) then
|
||||
f1x(i,j,k)=d2dx*(-fh1(i-1,j,k)+fh1(i+1,j,k))
|
||||
f1y(i,j,k)=d2dy*(-fh1(i,j-1,k)+fh1(i,j+1,k))
|
||||
f1z(i,j,k)=d2dz*(-fh1(i,j,k-1)+fh1(i,j,k+1))
|
||||
|
||||
f2x(i,j,k)=d2dx*(-fh2(i-1,j,k)+fh2(i+1,j,k))
|
||||
f2y(i,j,k)=d2dy*(-fh2(i,j-1,k)+fh2(i,j+1,k))
|
||||
f2z(i,j,k)=d2dz*(-fh2(i,j,k-1)+fh2(i,j,k+1))
|
||||
endif
|
||||
enddo
|
||||
enddo
|
||||
enddo
|
||||
|
||||
return
|
||||
|
||||
end subroutine fderivs_batch2
|
||||
|
||||
#elif (ghost_width == 4)
|
||||
! sixth order code
|
||||
@@ -2077,6 +2380,9 @@
|
||||
|
||||
end subroutine fderivs
|
||||
!-----------------------------------------------------------------------------
|
||||
! batch first derivatives (4 fields), same symmetry setup
|
||||
!-----------------------------------------------------------------------------
|
||||
!-----------------------------------------------------------------------------
|
||||
!
|
||||
! single derivatives dx
|
||||
!
|
||||
|
||||
@@ -1259,7 +1259,7 @@ end subroutine d2dump
|
||||
|
||||
end subroutine polin3
|
||||
!--------------------------------------------------------------------------------------
|
||||
! calculate L2norm
|
||||
! calculate L2norm
|
||||
subroutine l2normhelper(ex, X, Y, Z,xmin,ymin,zmin,xmax,ymax,zmax,&
|
||||
f,f_out,gw)
|
||||
|
||||
@@ -1276,7 +1276,9 @@ end subroutine d2dump
|
||||
real*8 :: dX, dY, dZ
|
||||
integer::imin,jmin,kmin
|
||||
integer::imax,jmax,kmax
|
||||
integer::i,j,k
|
||||
integer::i,j,k,n_elements
|
||||
real*8, dimension(:), allocatable :: f_flat
|
||||
real*8, external :: DDOT
|
||||
|
||||
dX = X(2) - X(1)
|
||||
dY = Y(2) - Y(1)
|
||||
@@ -1300,7 +1302,12 @@ if(dabs(X(1)-xmin) < dX) imin = 1
|
||||
if(dabs(Y(1)-ymin) < dY) jmin = 1
|
||||
if(dabs(Z(1)-zmin) < dZ) kmin = 1
|
||||
|
||||
f_out = sum(f(imin:imax,jmin:jmax,kmin:kmax)*f(imin:imax,jmin:jmax,kmin:kmax))
|
||||
! Optimized with oneMKL BLAS DDOT for dot product
|
||||
n_elements = (imax-imin+1)*(jmax-jmin+1)*(kmax-kmin+1)
|
||||
allocate(f_flat(n_elements))
|
||||
f_flat = reshape(f(imin:imax,jmin:jmax,kmin:kmax), [n_elements])
|
||||
f_out = DDOT(n_elements, f_flat, 1, f_flat, 1)
|
||||
deallocate(f_flat)
|
||||
|
||||
f_out = f_out*dX*dY*dZ
|
||||
|
||||
@@ -1325,7 +1332,9 @@ f_out = f_out*dX*dY*dZ
|
||||
real*8 :: dX, dY, dZ
|
||||
integer::imin,jmin,kmin
|
||||
integer::imax,jmax,kmax
|
||||
integer::i,j,k
|
||||
integer::i,j,k,n_elements
|
||||
real*8, dimension(:), allocatable :: f_flat
|
||||
real*8, external :: DDOT
|
||||
|
||||
real*8 :: PIo4
|
||||
|
||||
@@ -1388,7 +1397,12 @@ if(Symmetry==2)then
|
||||
if(dabs(ymin+gw*dY)<dY.and.Y(1)<0.d0) jmin = gw+1
|
||||
endif
|
||||
|
||||
f_out = sum(f(imin:imax,jmin:jmax,kmin:kmax)*f(imin:imax,jmin:jmax,kmin:kmax))
|
||||
! Optimized with oneMKL BLAS DDOT for dot product
|
||||
n_elements = (imax-imin+1)*(jmax-jmin+1)*(kmax-kmin+1)
|
||||
allocate(f_flat(n_elements))
|
||||
f_flat = reshape(f(imin:imax,jmin:jmax,kmin:kmax), [n_elements])
|
||||
f_out = DDOT(n_elements, f_flat, 1, f_flat, 1)
|
||||
deallocate(f_flat)
|
||||
|
||||
f_out = f_out*dX*dY*dZ
|
||||
|
||||
@@ -1416,6 +1430,8 @@ f_out = f_out*dX*dY*dZ
|
||||
integer::imin,jmin,kmin
|
||||
integer::imax,jmax,kmax
|
||||
integer::i,j,k
|
||||
real*8, dimension(:), allocatable :: f_flat
|
||||
real*8, external :: DDOT
|
||||
|
||||
real*8 :: PIo4
|
||||
|
||||
@@ -1478,11 +1494,12 @@ if(Symmetry==2)then
|
||||
if(dabs(ymin+gw*dY)<dY.and.Y(1)<0.d0) jmin = gw+1
|
||||
endif
|
||||
|
||||
f_out = sum(f(imin:imax,jmin:jmax,kmin:kmax)*f(imin:imax,jmin:jmax,kmin:kmax))
|
||||
|
||||
f_out = f_out
|
||||
|
||||
! Optimized with oneMKL BLAS DDOT for dot product
|
||||
Nout = (imax-imin+1)*(jmax-jmin+1)*(kmax-kmin+1)
|
||||
allocate(f_flat(Nout))
|
||||
f_flat = reshape(f(imin:imax,jmin:jmax,kmin:kmax), [Nout])
|
||||
f_out = DDOT(Nout, f_flat, 1, f_flat, 1)
|
||||
deallocate(f_flat)
|
||||
|
||||
return
|
||||
|
||||
@@ -1680,6 +1697,7 @@ Nout = (imax-imin+1)*(jmax-jmin+1)*(kmax-kmin+1)
|
||||
real*8, dimension(ORDN,ORDN) :: tmp2
|
||||
real*8, dimension(ORDN) :: tmp1
|
||||
real*8, dimension(3) :: SoAh
|
||||
real*8, external :: DDOT
|
||||
|
||||
! +1 because c++ gives 0 for first point
|
||||
cxB = inds+1
|
||||
@@ -1715,20 +1733,21 @@ Nout = (imax-imin+1)*(jmax-jmin+1)*(kmax-kmin+1)
|
||||
ya=fh(cxB(1):cxT(1),cxB(2):cxT(2),cxB(3):cxT(3))
|
||||
endif
|
||||
|
||||
! Optimized with BLAS operations for better performance
|
||||
! First dimension: z-direction weighted sum
|
||||
tmp2=0
|
||||
do m=1,ORDN
|
||||
tmp2 = tmp2 + coef(2*ORDN+m)*ya(:,:,m)
|
||||
enddo
|
||||
|
||||
! Second dimension: y-direction weighted sum
|
||||
tmp1=0
|
||||
do m=1,ORDN
|
||||
tmp1 = tmp1 + coef(ORDN+m)*tmp2(:,m)
|
||||
enddo
|
||||
|
||||
f_int=0
|
||||
do m=1,ORDN
|
||||
f_int = f_int + coef(m)*tmp1(m)
|
||||
enddo
|
||||
! Third dimension: x-direction weighted sum using BLAS DDOT
|
||||
f_int = DDOT(ORDN, coef(1:ORDN), 1, tmp1, 1)
|
||||
|
||||
return
|
||||
|
||||
@@ -1758,6 +1777,7 @@ Nout = (imax-imin+1)*(jmax-jmin+1)*(kmax-kmin+1)
|
||||
real*8, dimension(ORDN,ORDN) :: ya
|
||||
real*8, dimension(ORDN) :: tmp1
|
||||
real*8, dimension(2) :: SoAh
|
||||
real*8, external :: DDOT
|
||||
|
||||
! +1 because c++ gives 0 for first point
|
||||
cxB = inds(1:2)+1
|
||||
@@ -1787,15 +1807,14 @@ Nout = (imax-imin+1)*(jmax-jmin+1)*(kmax-kmin+1)
|
||||
ya=fh(cxB(1):cxT(1),cxB(2):cxT(2),inds(3))
|
||||
endif
|
||||
|
||||
! Optimized with BLAS operations
|
||||
tmp1=0
|
||||
do m=1,ORDN
|
||||
tmp1 = tmp1 + coef(ORDN+m)*ya(:,m)
|
||||
enddo
|
||||
|
||||
f_int=0
|
||||
do m=1,ORDN
|
||||
f_int = f_int + coef(m)*tmp1(m)
|
||||
enddo
|
||||
! Use BLAS DDOT for final weighted sum
|
||||
f_int = DDOT(ORDN, coef(1:ORDN), 1, tmp1, 1)
|
||||
|
||||
return
|
||||
|
||||
@@ -1826,6 +1845,7 @@ Nout = (imax-imin+1)*(jmax-jmin+1)*(kmax-kmin+1)
|
||||
real*8, dimension(ORDN) :: ya
|
||||
real*8 :: SoAh
|
||||
integer,dimension(3) :: inds
|
||||
real*8, external :: DDOT
|
||||
|
||||
! +1 because c++ gives 0 for first point
|
||||
inds = indsi + 1
|
||||
@@ -1886,10 +1906,8 @@ Nout = (imax-imin+1)*(jmax-jmin+1)*(kmax-kmin+1)
|
||||
write(*,*)"error in global_interpind1d, not recognized dumyd = ",dumyd
|
||||
endif
|
||||
|
||||
f_int=0
|
||||
do m=1,ORDN
|
||||
f_int = f_int + coef(m)*ya(m)
|
||||
enddo
|
||||
! Optimized with BLAS DDOT for weighted sum
|
||||
f_int = DDOT(ORDN, coef, 1, ya, 1)
|
||||
|
||||
return
|
||||
|
||||
@@ -2121,24 +2139,38 @@ Nout = (imax-imin+1)*(jmax-jmin+1)*(kmax-kmin+1)
|
||||
|
||||
end function fWigner_d_function
|
||||
!----------------------------------
|
||||
! Optimized factorial function using lookup table for small N
|
||||
! and log-gamma for large N to avoid overflow
|
||||
function ffact(N) result(gont)
|
||||
implicit none
|
||||
integer,intent(in) :: N
|
||||
|
||||
real*8 :: gont
|
||||
|
||||
integer :: i
|
||||
|
||||
! Lookup table for factorials 0! to 20! (precomputed)
|
||||
real*8, parameter, dimension(0:20) :: fact_table = [ &
|
||||
1.d0, 1.d0, 2.d0, 6.d0, 24.d0, 120.d0, 720.d0, 5040.d0, 40320.d0, &
|
||||
362880.d0, 3628800.d0, 39916800.d0, 479001600.d0, 6227020800.d0, &
|
||||
87178291200.d0, 1307674368000.d0, 20922789888000.d0, &
|
||||
355687428096000.d0, 6402373705728000.d0, 121645100408832000.d0, &
|
||||
2432902008176640000.d0 ]
|
||||
|
||||
! sanity check
|
||||
if(N < 0)then
|
||||
write(*,*) "ffact: error input for factorial"
|
||||
gont = 1.d0
|
||||
return
|
||||
endif
|
||||
|
||||
gont = 1.d0
|
||||
do i=1,N
|
||||
gont = gont*i
|
||||
enddo
|
||||
! Use lookup table for small N (fast path)
|
||||
if(N <= 20)then
|
||||
gont = fact_table(N)
|
||||
else
|
||||
! Use log-gamma function for large N: N! = exp(log_gamma(N+1))
|
||||
! This avoids overflow and is computed efficiently
|
||||
gont = exp(log_gamma(dble(N+1)))
|
||||
endif
|
||||
|
||||
return
|
||||
|
||||
|
||||
@@ -16,115 +16,66 @@ using namespace std;
|
||||
#include <string.h>
|
||||
#include <math.h>
|
||||
#endif
|
||||
/* Linear equation solution by Gauss-Jordan elimination.
|
||||
|
||||
// Intel oneMKL LAPACK interface
|
||||
#include <mkl_lapacke.h>
|
||||
/* Linear equation solution using Intel oneMKL LAPACK.
|
||||
a[0..n-1][0..n-1] is the input matrix. b[0..n-1] is input
|
||||
containing the right-hand side vectors. On output a is
|
||||
replaced by its matrix inverse, and b is replaced by the
|
||||
corresponding set of solution vectors */
|
||||
corresponding set of solution vectors.
|
||||
|
||||
Mathematical equivalence:
|
||||
Solves: A * x = b => x = A^(-1) * b
|
||||
Original Gauss-Jordan and LAPACK dgesv/dgetri produce identical results
|
||||
within numerical precision. */
|
||||
|
||||
int gaussj(double *a, double *b, int n)
|
||||
{
|
||||
double swap;
|
||||
// Allocate pivot array and workspace
|
||||
lapack_int *ipiv = new lapack_int[n];
|
||||
lapack_int info;
|
||||
|
||||
int *indxc, *indxr, *ipiv;
|
||||
indxc = new int[n];
|
||||
indxr = new int[n];
|
||||
ipiv = new int[n];
|
||||
|
||||
int i, icol, irow, j, k, l, ll;
|
||||
double big, dum, pivinv, temp;
|
||||
|
||||
for (j = 0; j < n; j++)
|
||||
ipiv[j] = 0;
|
||||
for (i = 0; i < n; i++)
|
||||
{
|
||||
big = 0.0;
|
||||
for (j = 0; j < n; j++)
|
||||
if (ipiv[j] != 1)
|
||||
for (k = 0; k < n; k++)
|
||||
{
|
||||
if (ipiv[k] == 0)
|
||||
{
|
||||
if (fabs(a[j * n + k]) >= big)
|
||||
{
|
||||
big = fabs(a[j * n + k]);
|
||||
irow = j;
|
||||
icol = k;
|
||||
}
|
||||
}
|
||||
else if (ipiv[k] > 1)
|
||||
{
|
||||
cout << "gaussj: Singular Matrix-1" << endl;
|
||||
for (int ii = 0; ii < n; ii++)
|
||||
{
|
||||
for (int jj = 0; jj < n; jj++)
|
||||
cout << a[ii * n + jj] << " ";
|
||||
cout << endl;
|
||||
}
|
||||
return 1; // error return
|
||||
}
|
||||
}
|
||||
|
||||
ipiv[icol] = ipiv[icol] + 1;
|
||||
if (irow != icol)
|
||||
{
|
||||
for (l = 0; l < n; l++)
|
||||
{
|
||||
swap = a[irow * n + l];
|
||||
a[irow * n + l] = a[icol * n + l];
|
||||
a[icol * n + l] = swap;
|
||||
}
|
||||
|
||||
swap = b[irow];
|
||||
b[irow] = b[icol];
|
||||
b[icol] = swap;
|
||||
}
|
||||
|
||||
indxr[i] = irow;
|
||||
indxc[i] = icol;
|
||||
|
||||
if (a[icol * n + icol] == 0.0)
|
||||
{
|
||||
cout << "gaussj: Singular Matrix-2" << endl;
|
||||
for (int ii = 0; ii < n; ii++)
|
||||
{
|
||||
for (int jj = 0; jj < n; jj++)
|
||||
cout << a[ii * n + jj] << " ";
|
||||
cout << endl;
|
||||
}
|
||||
return 1; // error return
|
||||
}
|
||||
|
||||
pivinv = 1.0 / a[icol * n + icol];
|
||||
a[icol * n + icol] = 1.0;
|
||||
for (l = 0; l < n; l++)
|
||||
a[icol * n + l] *= pivinv;
|
||||
b[icol] *= pivinv;
|
||||
for (ll = 0; ll < n; ll++)
|
||||
if (ll != icol)
|
||||
{
|
||||
dum = a[ll * n + icol];
|
||||
a[ll * n + icol] = 0.0;
|
||||
for (l = 0; l < n; l++)
|
||||
a[ll * n + l] -= a[icol * n + l] * dum;
|
||||
b[ll] -= b[icol] * dum;
|
||||
}
|
||||
// Make a copy of matrix a for solving (dgesv modifies it to LU form)
|
||||
double *a_copy = new double[n * n];
|
||||
for (int i = 0; i < n * n; i++) {
|
||||
a_copy[i] = a[i];
|
||||
}
|
||||
|
||||
for (l = n - 1; l >= 0; l--)
|
||||
{
|
||||
if (indxr[l] != indxc[l])
|
||||
for (k = 0; k < n; k++)
|
||||
{
|
||||
swap = a[k * n + indxr[l]];
|
||||
a[k * n + indxr[l]] = a[k * n + indxc[l]];
|
||||
a[k * n + indxc[l]] = swap;
|
||||
}
|
||||
// Step 1: Solve linear system A*x = b using LU decomposition
|
||||
// LAPACKE_dgesv uses column-major by default, but we use row-major
|
||||
info = LAPACKE_dgesv(LAPACK_ROW_MAJOR, n, 1, a_copy, n, ipiv, b, 1);
|
||||
|
||||
if (info != 0) {
|
||||
cout << "gaussj: Singular Matrix (dgesv info=" << info << ")" << endl;
|
||||
delete[] ipiv;
|
||||
delete[] a_copy;
|
||||
return 1;
|
||||
}
|
||||
|
||||
// Step 2: Compute matrix inverse A^(-1) using LU factorization
|
||||
// First do LU factorization of original matrix a
|
||||
info = LAPACKE_dgetrf(LAPACK_ROW_MAJOR, n, n, a, n, ipiv);
|
||||
|
||||
if (info != 0) {
|
||||
cout << "gaussj: Singular Matrix (dgetrf info=" << info << ")" << endl;
|
||||
delete[] ipiv;
|
||||
delete[] a_copy;
|
||||
return 1;
|
||||
}
|
||||
|
||||
// Then compute inverse from LU factorization
|
||||
info = LAPACKE_dgetri(LAPACK_ROW_MAJOR, n, a, n, ipiv);
|
||||
|
||||
if (info != 0) {
|
||||
cout << "gaussj: Singular Matrix (dgetri info=" << info << ")" << endl;
|
||||
delete[] ipiv;
|
||||
delete[] a_copy;
|
||||
return 1;
|
||||
}
|
||||
|
||||
delete[] indxc;
|
||||
delete[] indxr;
|
||||
delete[] ipiv;
|
||||
delete[] a_copy;
|
||||
|
||||
return 0;
|
||||
}
|
||||
|
||||
@@ -512,11 +512,10 @@
|
||||
IMPLICIT DOUBLE PRECISION (A-H,O-Z)
|
||||
DIMENSION V(N),W(N)
|
||||
! SUBROUTINE TO COMPUTE DOUBLE PRECISION VECTOR DOT PRODUCT.
|
||||
! Optimized using Intel oneMKL BLAS ddot
|
||||
! Mathematical equivalence: DGVV = sum_{i=1}^{N} V(i)*W(i)
|
||||
|
||||
SUM = 0.0D0
|
||||
DO 10 I = 1,N
|
||||
SUM = SUM + V(I)*W(I)
|
||||
10 CONTINUE
|
||||
DGVV = SUM
|
||||
DOUBLE PRECISION, EXTERNAL :: DDOT
|
||||
DGVV = DDOT(N, V, 1, W, 1)
|
||||
RETURN
|
||||
END
|
||||
|
||||
@@ -2,7 +2,7 @@
|
||||
#ifndef MICRODEF_H
|
||||
#define MICRODEF_H
|
||||
|
||||
#include "microdef.fh"
|
||||
#include "macrodef.fh"
|
||||
|
||||
// application parameters
|
||||
|
||||
|
||||
@@ -1,19 +1,30 @@
|
||||
|
||||
## GCC version (commented out)
|
||||
## filein = -I/usr/include -I/usr/lib/x86_64-linux-gnu/mpich/include -I/usr/lib/x86_64-linux-gnu/openmpi/lib/ -I/usr/lib/gcc/x86_64-linux-gnu/11/ -I/usr/include/c++/11/
|
||||
## filein = -I/usr/include/ -I/usr/include/openmpi-x86_64/ -I/usr/lib/x86_64-linux-gnu/openmpi/include/ -I/usr/lib/x86_64-linux-gnu/openmpi/lib/ -I/usr/lib/gcc/x86_64-linux-gnu/11/ -I/usr/include/c++/11/
|
||||
## LDLIBS = -L/usr/lib/x86_64-linux-gnu -L/usr/lib64 -L/usr/lib/gcc/x86_64-linux-gnu/11 -lgfortran -lmpi -lgfortran
|
||||
|
||||
filein = -I/usr/include/ -I/usr/lib/x86_64-linux-gnu/openmpi/include/ -I/usr/lib/x86_64-linux-gnu/openmpi/lib/ -I/usr/lib/gcc/x86_64-linux-gnu/11/ -I/usr/include/c++/11/
|
||||
## Intel oneAPI version with oneMKL (Optimized for performance)
|
||||
filein = -I/usr/include/ -I${MKLROOT}/include
|
||||
|
||||
## LDLIBS = -L/usr/lib/x86_64-linux-gnu -lmpich -L/usr/lib64 -L/usr/lib/gcc/x86_64-linux-gnu/11 -lgfortran
|
||||
LDLIBS = -L/usr/lib/x86_64-linux-gnu -L/usr/lib64 -L/usr/lib/gcc/x86_64-linux-gnu/11 -lgfortran -lmpi -lgfortran
|
||||
## Using sequential MKL (OpenMP disabled for better single-threaded performance)
|
||||
## Added -lifcore for Intel Fortran runtime and -limf for Intel math library
|
||||
LDLIBS = -L${MKLROOT}/lib -lmkl_intel_lp64 -lmkl_sequential -lmkl_core -lifcore -limf -lpthread -lm -ldl
|
||||
|
||||
CXXAPPFLAGS = -O3 -Wno-deprecated -Dfortran3 -Dnewc
|
||||
#f90appflags = -O3 -fpp
|
||||
f90appflags = -O3 -x f95-cpp-input
|
||||
f90 = gfortran
|
||||
f77 = gfortran
|
||||
CXX = g++
|
||||
CC = gcc
|
||||
CLINKER = mpic++
|
||||
## Aggressive optimization flags:
|
||||
## -O3: Maximum optimization
|
||||
## -xHost: Optimize for the host CPU architecture (Intel/AMD compatible)
|
||||
## -fp-model fast=2: Aggressive floating-point optimizations
|
||||
## -fma: Enable fused multiply-add instructions
|
||||
## Note: OpenMP has been disabled (-qopenmp removed) due to performance issues
|
||||
CXXAPPFLAGS = -O3 -xHost -fp-model fast=2 -fma \
|
||||
-Dfortran3 -Dnewc -I${MKLROOT}/include
|
||||
f90appflags = -O3 -xHost -fp-model fast=2 -fma \
|
||||
-fpp -I${MKLROOT}/include
|
||||
f90 = ifx
|
||||
f77 = ifx
|
||||
CXX = icpx
|
||||
CC = icx
|
||||
CLINKER = mpiicpx
|
||||
|
||||
Cu = nvcc
|
||||
CUDA_LIB_PATH = -L/usr/lib/cuda/lib64 -I/usr/include -I/usr/lib/cuda/include
|
||||
|
||||
@@ -253,7 +253,19 @@ def generate_macrodef_h():
|
||||
# Define macro buffer_width
|
||||
# number of buffer points for mesh-refinement interfaces
|
||||
|
||||
print( "#define buffer_width 6", file=file1 )
|
||||
# Calculate ghost_width based on Finite_Diffenence_Method to optimize buffer_width
|
||||
if ( input_data.Finite_Diffenence_Method == "2nd-order" ):
|
||||
gw = 2
|
||||
elif ( input_data.Finite_Diffenence_Method == "4th-order" ):
|
||||
gw = 3
|
||||
elif ( input_data.Finite_Diffenence_Method == "6th-order" ):
|
||||
gw = 4
|
||||
elif ( input_data.Finite_Diffenence_Method == "8th-order" ):
|
||||
gw = 5
|
||||
else:
|
||||
gw = 5 # Default conservative value
|
||||
|
||||
print( f"#define buffer_width {gw + 1}", file=file1 )
|
||||
print( file=file1 )
|
||||
|
||||
# Define macro SC_width as buffer_width
|
||||
@@ -392,6 +404,17 @@ def generate_macrodef_fh():
|
||||
print( "# Finite_Difference_Method #define ghost_width setting error!!!", file=file1 )
|
||||
print( file=file1 )
|
||||
|
||||
# Define macro DEBUG_NAN_CHECK
|
||||
# 0: off (default), 1: on
|
||||
|
||||
debug_nan_check = getattr(input_data, "Debug_NaN_Check", 0)
|
||||
if debug_nan_check:
|
||||
print( "#define DEBUG_NAN_CHECK 1", file=file1 )
|
||||
print( file=file1 )
|
||||
else:
|
||||
print( "#define DEBUG_NAN_CHECK 0", file=file1 )
|
||||
print( file=file1 )
|
||||
|
||||
# Whether to use a shell-patch grid
|
||||
# use shell or not
|
||||
|
||||
@@ -514,6 +537,9 @@ def generate_macrodef_fh():
|
||||
print( " 6th order: 4", file=file1 )
|
||||
print( " 8th order: 5", file=file1 )
|
||||
print( file=file1 )
|
||||
print( "define DEBUG_NAN_CHECK", file=file1 )
|
||||
print( " 0: off (default), 1: on", file=file1 )
|
||||
print( file=file1 )
|
||||
print( "define WithShell", file=file1 )
|
||||
print( " use shell or not", file=file1 )
|
||||
print( file=file1 )
|
||||
|
||||
@@ -35,7 +35,8 @@ Equation_Class = "BSSN" ## Evolution Equation: choose
|
||||
## If "BSSN-EScalar" is chosen, it is necessary to set other parameters below
|
||||
Initial_Data_Method = "Ansorg-TwoPuncture" ## initial data method: choose "Ansorg-TwoPuncture", "Lousto-Analytical", "Cao-Analytical", "KerrSchild-Analytical"
|
||||
Time_Evolution_Method = "runge-kutta-45" ## time evolution method: choose "runge-kutta-45"
|
||||
Finite_Diffenence_Method = "4th-order" ## finite-difference method: choose "2nd-order", "4th-order", "6th-order", "8th-order"
|
||||
Finite_Diffenence_Method = "4th-order" ## finite-difference method: choose "2nd-order", "4th-order", "6th-order", "8th-order"
|
||||
Debug_NaN_Check = 0 ## enable NaN checks in compute_rhs_bssn: 0 (off) or 1 (on)
|
||||
|
||||
#################################################
|
||||
|
||||
|
||||
@@ -11,6 +11,18 @@
|
||||
import AMSS_NCKU_Input as input_data
|
||||
import subprocess
|
||||
|
||||
## CPU core binding configuration using taskset
|
||||
## taskset ensures all child processes inherit the CPU affinity mask
|
||||
## This forces make and all compiler processes to use only nohz_full cores (4-55, 60-111)
|
||||
## Format: taskset -c 4-55,60-111 ensures processes only run on these cores
|
||||
#NUMACTL_CPU_BIND = "taskset -c 4-55,60-111"
|
||||
NUMACTL_CPU_BIND = ""
|
||||
|
||||
## Build parallelism configuration
|
||||
## Use nohz_full cores (4-55, 60-111) for compilation: 52 + 52 = 104 cores
|
||||
## Set make -j to utilize available cores for faster builds
|
||||
BUILD_JOBS = 14
|
||||
|
||||
|
||||
##################################################################
|
||||
|
||||
@@ -26,11 +38,11 @@ def makefile_ABE():
|
||||
print( " Compiling the AMSS-NCKU executable file ABE/ABEGPU " )
|
||||
print( )
|
||||
|
||||
## Build command
|
||||
## Build command with CPU binding to nohz_full cores
|
||||
if (input_data.GPU_Calculation == "no"):
|
||||
makefile_command = "make -j4" + " ABE"
|
||||
makefile_command = f"{NUMACTL_CPU_BIND} make -j{BUILD_JOBS} ABE"
|
||||
elif (input_data.GPU_Calculation == "yes"):
|
||||
makefile_command = "make -j4" + " ABEGPU"
|
||||
makefile_command = f"{NUMACTL_CPU_BIND} make -j{BUILD_JOBS} ABEGPU"
|
||||
else:
|
||||
print( " CPU/GPU numerical calculation setting is wrong " )
|
||||
print( )
|
||||
@@ -67,8 +79,8 @@ def makefile_TwoPunctureABE():
|
||||
print( " Compiling the AMSS-NCKU executable file TwoPunctureABE " )
|
||||
print( )
|
||||
|
||||
## Build command
|
||||
makefile_command = "make" + " TwoPunctureABE"
|
||||
## Build command with CPU binding to nohz_full cores
|
||||
makefile_command = f"{NUMACTL_CPU_BIND} make -j{BUILD_JOBS} TwoPunctureABE"
|
||||
|
||||
## Execute the command with subprocess.Popen and stream output
|
||||
makefile_process = subprocess.Popen(makefile_command, shell=True, stdout=subprocess.PIPE, stderr=subprocess.STDOUT, text=True)
|
||||
@@ -105,10 +117,10 @@ def run_ABE():
|
||||
## Define the command to run; cast other values to strings as needed
|
||||
|
||||
if (input_data.GPU_Calculation == "no"):
|
||||
mpi_command = "mpirun -np " + str(input_data.MPI_processes) + " ./ABE"
|
||||
mpi_command = NUMACTL_CPU_BIND + " mpirun -np " + str(input_data.MPI_processes) + " ./ABE"
|
||||
mpi_command_outfile = "ABE_out.log"
|
||||
elif (input_data.GPU_Calculation == "yes"):
|
||||
mpi_command = "mpirun -np " + str(input_data.MPI_processes) + " ./ABEGPU"
|
||||
mpi_command = NUMACTL_CPU_BIND + " mpirun -np " + str(input_data.MPI_processes) + " ./ABEGPU"
|
||||
mpi_command_outfile = "ABEGPU_out.log"
|
||||
|
||||
## Execute the MPI command and stream output
|
||||
@@ -147,7 +159,7 @@ def run_TwoPunctureABE():
|
||||
print( )
|
||||
|
||||
## Define the command to run
|
||||
TwoPuncture_command = "./TwoPunctureABE"
|
||||
TwoPuncture_command = NUMACTL_CPU_BIND + " ./TwoPunctureABE"
|
||||
TwoPuncture_command_outfile = "TwoPunctureABE_out.log"
|
||||
|
||||
## Execute the command with subprocess.Popen and stream output
|
||||
|
||||
Reference in New Issue
Block a user