修改block划分，对负载高的rank所在block进行划分，添加到空rank，空rank是平移得到的

Rank [  20]: Calc 0.000003 s

Rank [  35]: Calc 0.000003 s

Rank [  10]: Calc 0.000010 s

Rank [  17]: Calc 0.000005 s

Rank [  32]: Calc 0.000003 s，而且rank不固定，一般就是rank 10 和 rank 52；
但尽管有很多，比前者时间还是少很多
对于第二个Surf_Wave 调用 Interp_points，我发现前四个rank时间最长，比较固定，就是下面四个rank

Rank [  27]: Calc 0.331978 s

Rank [  35]: Calc 0.242219 s

Rank [  28]: Calc 0.242132 s

Rank [  36]: Calc 0.197024 s
因此下面surf_wave是核心

AMSS_NCKU_Program.py

@@ -8,6 +8,14 @@
 ##
 ##################################################################
 
+## Guard against re-execution by multiprocessing child processes.
+## Without this, using 'spawn' or 'forkserver' context would cause every
+## worker to re-run the entire script, spawning exponentially more
+## workers (fork bomb).
+if __name__ != '__main__':
+    import sys as _sys
+    _sys.exit(0)
+
 
 ##################################################################
 
@@ -58,7 +66,8 @@ if os.path.exists(File_directory):
     ## Prompt whether to overwrite the existing directory
     while True:
         try:
-            inputvalue = input()
+            ## inputvalue = input()
+            inputvalue = "continue"
             ## If the user agrees to overwrite, proceed and remove the existing directory
             if ( inputvalue == "continue" ):
                 print( " Continue the calculation !!! " )
@@ -424,26 +433,31 @@ print(
 
 import plot_xiaoqu
 import plot_GW_strain_amplitude_xiaoqu
+from parallel_plot_helper import run_plot_tasks_parallel
+
+plot_tasks = []
 
 ## Plot black hole trajectory
-plot_xiaoqu.generate_puncture_orbit_plot(   binary_results_directory, figure_directory )
-plot_xiaoqu.generate_puncture_orbit_plot3D( binary_results_directory, figure_directory )
+plot_tasks.append( ( plot_xiaoqu.generate_puncture_orbit_plot,   (binary_results_directory, figure_directory) ) )
+plot_tasks.append( ( plot_xiaoqu.generate_puncture_orbit_plot3D, (binary_results_directory, figure_directory) ) )
 
 ## Plot black hole separation vs. time
-plot_xiaoqu.generate_puncture_distence_plot( binary_results_directory, figure_directory )
+plot_tasks.append( ( plot_xiaoqu.generate_puncture_distence_plot, (binary_results_directory, figure_directory) ) )
 
 ## Plot gravitational waveforms (psi4 and strain amplitude)
 for i in range(input_data.Detector_Number):
-    plot_xiaoqu.generate_gravitational_wave_psi4_plot( binary_results_directory, figure_directory, i )
-    plot_GW_strain_amplitude_xiaoqu.generate_gravitational_wave_amplitude_plot( binary_results_directory, figure_directory, i )
+    plot_tasks.append( ( plot_xiaoqu.generate_gravitational_wave_psi4_plot, (binary_results_directory, figure_directory, i) ) )
+    plot_tasks.append( ( plot_GW_strain_amplitude_xiaoqu.generate_gravitational_wave_amplitude_plot, (binary_results_directory, figure_directory, i) ) )
 
 ## Plot ADM mass evolution
 for i in range(input_data.Detector_Number):
-    plot_xiaoqu.generate_ADMmass_plot( binary_results_directory, figure_directory, i )
+    plot_tasks.append( ( plot_xiaoqu.generate_ADMmass_plot, (binary_results_directory, figure_directory, i) ) )
 
 ## Plot Hamiltonian constraint violation over time
 for i in range(input_data.grid_level):
-    plot_xiaoqu.generate_constraint_check_plot( binary_results_directory, figure_directory, i )
+    plot_tasks.append( ( plot_xiaoqu.generate_constraint_check_plot, (binary_results_directory, figure_directory, i) ) )
+
+run_plot_tasks_parallel(plot_tasks)
 
 ## Plot stored binary data
 plot_xiaoqu.generate_binary_data_plot( binary_results_directory, figure_directory )

AMSS_NCKU_source/NullShellPatch.h

@@ -24,6 +24,7 @@ using namespace std;
 #endif
 
 #include <mpi.h>
+#include <memory.h>
 #include "MyList.h"
 #include "Block.h"
 #include "Parallel.h"

AMSS_NCKU_source/Parallel.h

@@ -1,204 +1,235 @@
-
-#ifndef PARALLEL_H
-#define PARALLEL_H
-
-#include <iostream>
-#include <iomanip>
-#include <fstream>
-#include <cstdlib>
-#include <cstdio>
-#include <string>
-#include <cmath>
-#include <new>
-using namespace std;
-
-#include "Parallel_bam.h"
-#include "var.h"
-#include "MPatch.h"
-#include "Block.h"
-#include "MyList.h"
-#include "macrodef.h" //need dim; ghost_width; CONTRACT
-namespace Parallel
-{
-  struct gridseg
-  {
-    double llb[dim];
-    double uub[dim];
-    int shape[dim];
-    double illb[dim], iuub[dim]; // only use for OutBdLow2Hi
-    Block *Bg;
-  };
-  int partition1(int &nx, int split_size, int min_width, int cpusize, int shape);    // special for 1 diemnsion
-  int partition2(int *nxy, int split_size, int *min_width, int cpusize, int *shape); // special for 2 diemnsions
-  int partition3(int *nxyz, int split_size, int *min_width, int cpusize, int *shape);
-  MyList<Block> *distribute(MyList<Patch> *PatchLIST, int cpusize, int ingfsi, int fngfs, bool periodic, int nodes = 0); // produce corresponding Blocks
-  void KillBlocks(MyList<Patch> *PatchLIST);
-
-  void setfunction(MyList<Block> *BlL, var *vn, double func(double x, double y, double z));
-  void setfunction(int rank, MyList<Block> *BlL, var *vn, double func(double x, double y, double z));
-  void writefile(double time, int nx, int ny, int nz, double xmin, double xmax, double ymin, double ymax,
-                 double zmin, double zmax, char *filename, double *data_out);
-  void writefile(double time, int nx, int ny, double xmin, double xmax, double ymin, double ymax,
-                 char *filename, double *datain);
-  void getarrayindex(int DIM, int *shape, int *index, int n);
-  int getarraylocation(int DIM, int *shape, int *index);
-  void copy(int DIM, double *llbout, double *uubout, int *Dshape, double *DD, double *llbin, double *uubin,
-            int *shape, double *datain, double *llb, double *uub);
-  void Dump_CPU_Data(MyList<Block> *BlL, MyList<var> *DumpList, char *tag, double time, double dT);
-  void Dump_Data(MyList<Patch> *PL, MyList<var> *DumpList, char *tag, double time, double dT);
-  void Dump_Data(Patch *PP, MyList<var> *DumpList, char *tag, double time, double dT, int grd);
-  double *Collect_Data(Patch *PP, var *VP);
-  void d2Dump_Data(MyList<Patch> *PL, MyList<var> *DumpList, char *tag, double time, double dT);
-  void d2Dump_Data(Patch *PP, MyList<var> *DumpList, char *tag, double time, double dT, int grd);
-  void Dump_Data0(Patch *PP, MyList<var> *DumpList, char *tag, double time, double dT);
-  double global_interp(int DIM, int *ext, double **CoX, double *datain,
-                       double *poX, int ordn, double *SoA, int Symmetry);
-  double global_interp(int DIM, int *ext, double **CoX, double *datain,
-                       double *poX, int ordn);
-  double Lagrangian_Int(double x, int npts, double *xpts, double *funcvals);
-  double LagrangePoly(double x, int pt, int npts, double *xpts);
-  MyList<gridseg> *build_complete_gsl(Patch *Pat);
-  MyList<gridseg> *build_complete_gsl(MyList<Patch> *PatL);
-  MyList<gridseg> *build_complete_gsl_virtual(MyList<Patch> *PatL);
-  MyList<gridseg> *build_complete_gsl_virtual2(MyList<Patch> *PatL);        // - buffer
-  MyList<gridseg> *build_owned_gsl0(Patch *Pat, int rank_in);               // - ghost without extension, special for Sync usage
-  MyList<gridseg> *build_owned_gsl1(Patch *Pat, int rank_in);               // - ghost, similar to build_owned_gsl0 but extend one point on left side for vertex grid
-  MyList<gridseg> *build_owned_gsl2(Patch *Pat, int rank_in);               // - buffer - ghost
-  MyList<gridseg> *build_owned_gsl3(Patch *Pat, int rank_in, int Symmetry); // - ghost - BD ghost
-  MyList<gridseg> *build_owned_gsl4(Patch *Pat, int rank_in, int Symmetry); // - buffer - ghost - BD ghost
-  MyList<gridseg> *build_owned_gsl5(Patch *Pat, int rank_in);               // similar to build_owned_gsl2 but no extension
-  MyList<gridseg> *build_owned_gsl(MyList<Patch> *PatL, int rank_in, int type, int Symmetry);
-  void build_gstl(MyList<gridseg> *srci, MyList<gridseg> *dsti, MyList<gridseg> **out_src, MyList<gridseg> **out_dst);
-  int data_packer(double *data, MyList<gridseg> *src, MyList<gridseg> *dst, int rank_in, int dir,
-                  MyList<var> *VarLists, MyList<var> *VarListd, int Symmetry);
-  void transfer(MyList<gridseg> **src, MyList<gridseg> **dst,
-                MyList<var> *VarList1 /* source */, MyList<var> *VarList2 /*target */,
-                int Symmetry);
-  int data_packermix(double *data, MyList<gridseg> *src, MyList<gridseg> *dst, int rank_in, int dir,
-                     MyList<var> *VarLists, MyList<var> *VarListd, int Symmetry);
-  void transfermix(MyList<gridseg> **src, MyList<gridseg> **dst,
-                   MyList<var> *VarList1 /* source */, MyList<var> *VarList2 /*target */,
-                   int Symmetry);
-  void Sync(Patch *Pat, MyList<var> *VarList, int Symmetry);
-  void Sync(MyList<Patch> *PatL, MyList<var> *VarList, int Symmetry);
-  void Sync_merged(MyList<Patch> *PatL, MyList<var> *VarList, int Symmetry);
-
-  struct SyncCache {
-    bool valid;
-    int cpusize;
-    MyList<gridseg> **combined_src;
-    MyList<gridseg> **combined_dst;
-    int *send_lengths;
-    int *recv_lengths;
-    double **send_bufs;
-    double **recv_bufs;
-    int *send_buf_caps;
-    int *recv_buf_caps;
-    MPI_Request *reqs;
-    MPI_Status *stats;
-    int max_reqs;
-    bool lengths_valid;
-    SyncCache();
-    void invalidate();
-    void destroy();
-  };
-
-  void Sync_cached(MyList<Patch> *PatL, MyList<var> *VarList, int Symmetry, SyncCache &cache);
-  void transfer_cached(MyList<gridseg> **src, MyList<gridseg> **dst,
-                       MyList<var> *VarList1, MyList<var> *VarList2,
-                       int Symmetry, SyncCache &cache);
-
-  struct AsyncSyncState {
-    int req_no;
-    bool active;
-    AsyncSyncState() : req_no(0), active(false) {}
-  };
-
-  void Sync_start(MyList<Patch> *PatL, MyList<var> *VarList, int Symmetry,
-                  SyncCache &cache, AsyncSyncState &state);
-  void Sync_finish(SyncCache &cache, AsyncSyncState &state,
-                   MyList<var> *VarList, int Symmetry);
-  void OutBdLow2Hi(Patch *Patc, Patch *Patf,
-                   MyList<var> *VarList1 /* source */, MyList<var> *VarList2 /* target */,
-                   int Symmetry);
-  void OutBdLow2Hi(MyList<Patch> *PatcL, MyList<Patch> *PatfL,
-                   MyList<var> *VarList1 /* source */, MyList<var> *VarList2 /* target */,
-                   int Symmetry);
-  void OutBdLow2Himix(Patch *Patc, Patch *Patf,
-                      MyList<var> *VarList1 /* source */, MyList<var> *VarList2 /* target */,
-                      int Symmetry);
-  void OutBdLow2Himix(MyList<Patch> *PatcL, MyList<Patch> *PatfL,
-                      MyList<var> *VarList1 /* source */, MyList<var> *VarList2 /* target */,
-                      int Symmetry);
-  void Prolong(Patch *Patc, Patch *Patf,
-               MyList<var> *VarList1 /* source */, MyList<var> *VarList2 /* target */,
-               int Symmetry);
-  void Prolongint(Patch *Patc, Patch *Patf,
-                  MyList<var> *VarList1 /* source */, MyList<var> *VarList2 /* target */,
-                  int Symmetry);
-  void Restrict(MyList<Patch> *PatcL, MyList<Patch> *PatfL,
-                MyList<var> *VarList1 /* source */, MyList<var> *VarList2 /* target */,
-                int Symmetry);
-  void Restrict_after(MyList<Patch> *PatcL, MyList<Patch> *PatfL,
-                      MyList<var> *VarList1 /* source */, MyList<var> *VarList2 /* target */,
-                      int Symmetry); // for -ghost - BDghost
-  MyList<Parallel::gridseg> *build_PhysBD_gsl(Patch *Pat);
-  MyList<Parallel::gridseg> *build_ghost_gsl(MyList<Patch> *PatL);
-  MyList<Parallel::gridseg> *build_ghost_gsl(Patch *Pat);
-  MyList<Parallel::gridseg> *build_buffer_gsl(Patch *Pat);
-  MyList<Parallel::gridseg> *build_buffer_gsl(MyList<Patch> *PatL);
-  MyList<Parallel::gridseg> *gsl_subtract(MyList<Parallel::gridseg> *A, MyList<Parallel::gridseg> *B);
-  MyList<Parallel::gridseg> *gs_subtract(MyList<Parallel::gridseg> *A, MyList<Parallel::gridseg> *B);
-  MyList<Parallel::gridseg> *gsl_and(MyList<Parallel::gridseg> *A, MyList<Parallel::gridseg> *B);
-  MyList<Parallel::gridseg> *gs_and(MyList<Parallel::gridseg> *A, MyList<Parallel::gridseg> *B);
-  MyList<Parallel::gridseg> *clone_gsl(MyList<Parallel::gridseg> *p, bool first_only);
-  MyList<Parallel::gridseg> *build_bulk_gsl(Patch *Pat); // similar to build_owned_gsl0 but does not care rank issue
-  MyList<Parallel::gridseg> *build_bulk_gsl(Block *bp, Patch *Pat);
-  void build_PhysBD_gstl(Patch *Pat, MyList<Parallel::gridseg> *srci, MyList<Parallel::gridseg> *dsti,
-                         MyList<Parallel::gridseg> **out_src, MyList<Parallel::gridseg> **out_dst);
-  void PeriodicBD(Patch *Pat, MyList<var> *VarList, int Symmetry);
-  double L2Norm(Patch *Pat, var *vf);
-  void checkgsl(MyList<Parallel::gridseg> *pp, bool first_only);
-  void checkvarl(MyList<var> *pp, bool first_only);
-  MyList<Parallel::gridseg> *divide_gsl(MyList<Parallel::gridseg> *p, Patch *Pat);
-  MyList<Parallel::gridseg> *divide_gs(MyList<Parallel::gridseg> *p, Patch *Pat);
-  void prepare_inter_time_level(Patch *Pat,
-                                MyList<var> *VarList1 /* source (t+dt) */, MyList<var> *VarList2 /* source (t) */,
-                                MyList<var> *VarList3 /* target (t+a*dt) */, int tindex);
-  void prepare_inter_time_level(Patch *Pat,
-                                MyList<var> *VarList1 /* source (t+dt) */, MyList<var> *VarList2 /* source (t) */,
-                                MyList<var> *VarList3 /* source (t-dt) */, MyList<var> *VarList4 /* target (t+a*dt) */, int tindex);
-  void prepare_inter_time_level(MyList<Patch> *PatL,
-                                MyList<var> *VarList1 /* source (t+dt) */, MyList<var> *VarList2 /* source (t) */,
-                                MyList<var> *VarList3 /* target (t+a*dt) */, int tindex);
-  void prepare_inter_time_level(MyList<Patch> *Pat,
-                                MyList<var> *VarList1 /* source (t+dt) */, MyList<var> *VarList2 /* source (t) */,
-                                MyList<var> *VarList3 /* source (t-dt) */, MyList<var> *VarList4 /* target (t+a*dt) */, int tindex);
-  void merge_gsl(MyList<gridseg> *&A, const double ratio);
-  bool merge_gs(MyList<gridseg> *D, MyList<gridseg> *B, MyList<gridseg> *&C, const double ratio);
-  // Add ghost region to tangent plane
-  // we assume the grids have the same resolution
-  void add_ghost_touch(MyList<gridseg> *&A);
-  void cut_gsl(MyList<gridseg> *&A);
-  bool cut_gs(MyList<gridseg> *D, MyList<gridseg> *B, MyList<gridseg> *&C);
-  MyList<Parallel::gridseg> *gs_subtract_virtual(MyList<Parallel::gridseg> *A, MyList<Parallel::gridseg> *B);
-  void fill_level_data(MyList<Patch> *PatLd, MyList<Patch> *PatLs, MyList<Patch> *PatcL,
-                       MyList<var> *OldList, MyList<var> *StateList, MyList<var> *FutureList,
-                       MyList<var> *tmList, int Symmetry, bool BB, bool CC);
-  bool PatList_Interp_Points(MyList<Patch> *PatL, MyList<var> *VarList,
-                             int NN, double **XX,
-                             double *Shellf, int Symmetry);
-  void aligncheck(double *bbox0, double *bboxl, int lev, double *DH0, int *shape);
-  bool point_locat_gsl(double *pox, MyList<Parallel::gridseg> *gsl);
-  void checkpatchlist(MyList<Patch> *PatL, bool buflog);
-
-  double L2Norm(Patch *Pat, var *vf, MPI_Comm Comm_here);
-  bool PatList_Interp_Points(MyList<Patch> *PatL, MyList<var> *VarList,
-                             int NN, double **XX,
-                             double *Shellf, int Symmetry, MPI_Comm Comm_here);
-#if (PSTR == 1 || PSTR == 2 || PSTR == 3)
-  MyList<Block> *distribute(MyList<Patch> *PatchLIST, int cpusize, int ingfsi, int fngfsi,
-                            bool periodic, int start_rank, int end_rank, int nodes = 0);
-#endif
-}
-#endif /*PARALLEL_H */
+
+#ifndef PARALLEL_H
+#define PARALLEL_H
+
+#include <iostream>
+#include <iomanip>
+#include <fstream>
+#include <cstdlib>
+#include <cstdio>
+#include <string>
+#include <cmath>
+#include <new>
+using namespace std;
+#include <memory.h>
+#include "Parallel_bam.h"
+#include "var.h"
+#include "MPatch.h"
+#include "Block.h"
+#include "MyList.h"
+#include "macrodef.h" //need dim; ghost_width; CONTRACT
+namespace Parallel
+{
+  struct gridseg
+  {
+    double llb[dim];
+    double uub[dim];
+    int shape[dim];
+    double illb[dim], iuub[dim]; // only use for OutBdLow2Hi
+    Block *Bg;
+  };
+  int partition1(int &nx, int split_size, int min_width, int cpusize, int shape);    // special for 1 diemnsion
+  int partition2(int *nxy, int split_size, int *min_width, int cpusize, int *shape); // special for 2 diemnsions
+  int partition3(int *nxyz, int split_size, int *min_width, int cpusize, int *shape);
+  MyList<Block> *distribute(MyList<Patch> *PatchLIST, int cpusize, int ingfsi, int fngfs, bool periodic, int nodes = 0); // produce corresponding Blocks
+  MyList<Block> *distribute_hard(MyList<Patch> *PatchLIST, int cpusize, int ingfsi, int fngfs, bool periodic, int nodes = 0); // produce corresponding Blocks
+  Block* splitHotspotBlock(MyList<Block>* &BlL, int _dim, 
+                                 int ib0_orig, int ib3_orig, 
+                                 int jb1_orig, int jb4_orig, 
+                                 int kb2_orig, int kb5_orig, 
+                                 Patch* PP, int r_left, int r_right, 
+                                 int ingfsi, int fngfsi, bool periodic,
+                                 Block* &split_first_block, Block* &split_last_block);
+  Block* createMappedBlock(MyList<Block>* &BlL, int _dim, int* shape, double* bbox,
+                        int block_id, int ingfsi, int fngfsi, int lev); 
+  void KillBlocks(MyList<Patch> *PatchLIST);
+
+  void setfunction(MyList<Block> *BlL, var *vn, double func(double x, double y, double z));
+  void setfunction(int rank, MyList<Block> *BlL, var *vn, double func(double x, double y, double z));
+  void writefile(double time, int nx, int ny, int nz, double xmin, double xmax, double ymin, double ymax,
+                 double zmin, double zmax, char *filename, double *data_out);
+  void writefile(double time, int nx, int ny, double xmin, double xmax, double ymin, double ymax,
+                 char *filename, double *datain);
+  void getarrayindex(int DIM, int *shape, int *index, int n);
+  int getarraylocation(int DIM, int *shape, int *index);
+  void copy(int DIM, double *llbout, double *uubout, int *Dshape, double *DD, double *llbin, double *uubin,
+            int *shape, double *datain, double *llb, double *uub);
+  void Dump_CPU_Data(MyList<Block> *BlL, MyList<var> *DumpList, char *tag, double time, double dT);
+  void Dump_Data(MyList<Patch> *PL, MyList<var> *DumpList, char *tag, double time, double dT);
+  void Dump_Data(Patch *PP, MyList<var> *DumpList, char *tag, double time, double dT, int grd);
+  double *Collect_Data(Patch *PP, var *VP);
+  void d2Dump_Data(MyList<Patch> *PL, MyList<var> *DumpList, char *tag, double time, double dT);
+  void d2Dump_Data(Patch *PP, MyList<var> *DumpList, char *tag, double time, double dT, int grd);
+  void Dump_Data0(Patch *PP, MyList<var> *DumpList, char *tag, double time, double dT);
+  double global_interp(int DIM, int *ext, double **CoX, double *datain,
+                       double *poX, int ordn, double *SoA, int Symmetry);
+  double global_interp(int DIM, int *ext, double **CoX, double *datain,
+                       double *poX, int ordn);
+  double Lagrangian_Int(double x, int npts, double *xpts, double *funcvals);
+  double LagrangePoly(double x, int pt, int npts, double *xpts);
+  MyList<gridseg> *build_complete_gsl(Patch *Pat);
+  MyList<gridseg> *build_complete_gsl(MyList<Patch> *PatL);
+  MyList<gridseg> *build_complete_gsl_virtual(MyList<Patch> *PatL);
+  MyList<gridseg> *build_complete_gsl_virtual2(MyList<Patch> *PatL);        // - buffer
+  MyList<gridseg> *build_owned_gsl0(Patch *Pat, int rank_in);               // - ghost without extension, special for Sync usage
+  MyList<gridseg> *build_owned_gsl1(Patch *Pat, int rank_in);               // - ghost, similar to build_owned_gsl0 but extend one point on left side for vertex grid
+  MyList<gridseg> *build_owned_gsl2(Patch *Pat, int rank_in);               // - buffer - ghost
+  MyList<gridseg> *build_owned_gsl3(Patch *Pat, int rank_in, int Symmetry); // - ghost - BD ghost
+  MyList<gridseg> *build_owned_gsl4(Patch *Pat, int rank_in, int Symmetry); // - buffer - ghost - BD ghost
+  MyList<gridseg> *build_owned_gsl5(Patch *Pat, int rank_in);               // similar to build_owned_gsl2 but no extension
+  MyList<gridseg> *build_owned_gsl(MyList<Patch> *PatL, int rank_in, int type, int Symmetry);
+  void build_gstl(MyList<gridseg> *srci, MyList<gridseg> *dsti, MyList<gridseg> **out_src, MyList<gridseg> **out_dst);
+  int data_packer(double *data, MyList<gridseg> *src, MyList<gridseg> *dst, int rank_in, int dir,
+                  MyList<var> *VarLists, MyList<var> *VarListd, int Symmetry);
+  void transfer(MyList<gridseg> **src, MyList<gridseg> **dst,
+                MyList<var> *VarList1 /* source */, MyList<var> *VarList2 /*target */,
+                int Symmetry);
+  int data_packermix(double *data, MyList<gridseg> *src, MyList<gridseg> *dst, int rank_in, int dir,
+                     MyList<var> *VarLists, MyList<var> *VarListd, int Symmetry);
+  void transfermix(MyList<gridseg> **src, MyList<gridseg> **dst,
+                   MyList<var> *VarList1 /* source */, MyList<var> *VarList2 /*target */,
+                   int Symmetry);
+  void Sync(Patch *Pat, MyList<var> *VarList, int Symmetry);
+  void Sync(MyList<Patch> *PatL, MyList<var> *VarList, int Symmetry);
+  void Sync_merged(MyList<Patch> *PatL, MyList<var> *VarList, int Symmetry);
+
+  struct SyncCache {
+    bool valid;
+    int cpusize;
+    MyList<gridseg> **combined_src;
+    MyList<gridseg> **combined_dst;
+    int *send_lengths;
+    int *recv_lengths;
+    double **send_bufs;
+    double **recv_bufs;
+    int *send_buf_caps;
+    int *recv_buf_caps;
+    MPI_Request *reqs;
+    MPI_Status *stats;
+    int max_reqs;
+    bool lengths_valid;
+    SyncCache();
+    void invalidate();
+    void destroy();
+  };
+
+  void Sync_cached(MyList<Patch> *PatL, MyList<var> *VarList, int Symmetry, SyncCache &cache);
+  void transfer_cached(MyList<gridseg> **src, MyList<gridseg> **dst,
+                       MyList<var> *VarList1, MyList<var> *VarList2,
+                       int Symmetry, SyncCache &cache);
+
+  struct AsyncSyncState {
+    int req_no;
+    bool active;
+    AsyncSyncState() : req_no(0), active(false) {}
+  };
+
+  void Sync_start(MyList<Patch> *PatL, MyList<var> *VarList, int Symmetry,
+                  SyncCache &cache, AsyncSyncState &state);
+  void Sync_finish(SyncCache &cache, AsyncSyncState &state,
+                   MyList<var> *VarList, int Symmetry);
+  void OutBdLow2Hi(Patch *Patc, Patch *Patf,
+                   MyList<var> *VarList1 /* source */, MyList<var> *VarList2 /* target */,
+                   int Symmetry);
+  void OutBdLow2Hi(MyList<Patch> *PatcL, MyList<Patch> *PatfL,
+                   MyList<var> *VarList1 /* source */, MyList<var> *VarList2 /* target */,
+                   int Symmetry);
+  void OutBdLow2Himix(Patch *Patc, Patch *Patf,
+                      MyList<var> *VarList1 /* source */, MyList<var> *VarList2 /* target */,
+                      int Symmetry);
+  void OutBdLow2Himix(MyList<Patch> *PatcL, MyList<Patch> *PatfL,
+                      MyList<var> *VarList1 /* source */, MyList<var> *VarList2 /* target */,
+                      int Symmetry);
+  void Restrict_cached(MyList<Patch> *PatcL, MyList<Patch> *PatfL,
+                       MyList<var> *VarList1, MyList<var> *VarList2,
+                       int Symmetry, SyncCache &cache);
+  void OutBdLow2Hi_cached(MyList<Patch> *PatcL, MyList<Patch> *PatfL,
+                          MyList<var> *VarList1, MyList<var> *VarList2,
+                          int Symmetry, SyncCache &cache);
+  void OutBdLow2Himix_cached(MyList<Patch> *PatcL, MyList<Patch> *PatfL,
+                             MyList<var> *VarList1, MyList<var> *VarList2,
+                             int Symmetry, SyncCache &cache);
+  void Prolong(Patch *Patc, Patch *Patf,
+               MyList<var> *VarList1 /* source */, MyList<var> *VarList2 /* target */,
+               int Symmetry);
+  void Prolongint(Patch *Patc, Patch *Patf,
+                  MyList<var> *VarList1 /* source */, MyList<var> *VarList2 /* target */,
+                  int Symmetry);
+  void Restrict(MyList<Patch> *PatcL, MyList<Patch> *PatfL,
+                MyList<var> *VarList1 /* source */, MyList<var> *VarList2 /* target */,
+                int Symmetry);
+  void Restrict_after(MyList<Patch> *PatcL, MyList<Patch> *PatfL,
+                      MyList<var> *VarList1 /* source */, MyList<var> *VarList2 /* target */,
+                      int Symmetry); // for -ghost - BDghost
+  MyList<Parallel::gridseg> *build_PhysBD_gsl(Patch *Pat);
+  MyList<Parallel::gridseg> *build_ghost_gsl(MyList<Patch> *PatL);
+  MyList<Parallel::gridseg> *build_ghost_gsl(Patch *Pat);
+  MyList<Parallel::gridseg> *build_buffer_gsl(Patch *Pat);
+  MyList<Parallel::gridseg> *build_buffer_gsl(MyList<Patch> *PatL);
+  MyList<Parallel::gridseg> *gsl_subtract(MyList<Parallel::gridseg> *A, MyList<Parallel::gridseg> *B);
+  MyList<Parallel::gridseg> *gs_subtract(MyList<Parallel::gridseg> *A, MyList<Parallel::gridseg> *B);
+  MyList<Parallel::gridseg> *gsl_and(MyList<Parallel::gridseg> *A, MyList<Parallel::gridseg> *B);
+  MyList<Parallel::gridseg> *gs_and(MyList<Parallel::gridseg> *A, MyList<Parallel::gridseg> *B);
+  MyList<Parallel::gridseg> *clone_gsl(MyList<Parallel::gridseg> *p, bool first_only);
+  MyList<Parallel::gridseg> *build_bulk_gsl(Patch *Pat); // similar to build_owned_gsl0 but does not care rank issue
+  MyList<Parallel::gridseg> *build_bulk_gsl(Block *bp, Patch *Pat);
+  void build_PhysBD_gstl(Patch *Pat, MyList<Parallel::gridseg> *srci, MyList<Parallel::gridseg> *dsti,
+                         MyList<Parallel::gridseg> **out_src, MyList<Parallel::gridseg> **out_dst);
+  void PeriodicBD(Patch *Pat, MyList<var> *VarList, int Symmetry);
+  double L2Norm(Patch *Pat, var *vf);
+  void checkgsl(MyList<Parallel::gridseg> *pp, bool first_only);
+  void checkvarl(MyList<var> *pp, bool first_only);
+  MyList<Parallel::gridseg> *divide_gsl(MyList<Parallel::gridseg> *p, Patch *Pat);
+  MyList<Parallel::gridseg> *divide_gs(MyList<Parallel::gridseg> *p, Patch *Pat);
+  void prepare_inter_time_level(Patch *Pat,
+                                MyList<var> *VarList1 /* source (t+dt) */, MyList<var> *VarList2 /* source (t) */,
+                                MyList<var> *VarList3 /* target (t+a*dt) */, int tindex);
+  void prepare_inter_time_level(Patch *Pat,
+                                MyList<var> *VarList1 /* source (t+dt) */, MyList<var> *VarList2 /* source (t) */,
+                                MyList<var> *VarList3 /* source (t-dt) */, MyList<var> *VarList4 /* target (t+a*dt) */, int tindex);
+  void prepare_inter_time_level(MyList<Patch> *PatL,
+                                MyList<var> *VarList1 /* source (t+dt) */, MyList<var> *VarList2 /* source (t) */,
+                                MyList<var> *VarList3 /* target (t+a*dt) */, int tindex);
+  void prepare_inter_time_level(MyList<Patch> *Pat,
+                                MyList<var> *VarList1 /* source (t+dt) */, MyList<var> *VarList2 /* source (t) */,
+                                MyList<var> *VarList3 /* source (t-dt) */, MyList<var> *VarList4 /* target (t+a*dt) */, int tindex);
+  void merge_gsl(MyList<gridseg> *&A, const double ratio);
+  bool merge_gs(MyList<gridseg> *D, MyList<gridseg> *B, MyList<gridseg> *&C, const double ratio);
+  // Add ghost region to tangent plane
+  // we assume the grids have the same resolution
+  void add_ghost_touch(MyList<gridseg> *&A);
+  void cut_gsl(MyList<gridseg> *&A);
+  bool cut_gs(MyList<gridseg> *D, MyList<gridseg> *B, MyList<gridseg> *&C);
+  MyList<Parallel::gridseg> *gs_subtract_virtual(MyList<Parallel::gridseg> *A, MyList<Parallel::gridseg> *B);
+  void fill_level_data(MyList<Patch> *PatLd, MyList<Patch> *PatLs, MyList<Patch> *PatcL,
+                       MyList<var> *OldList, MyList<var> *StateList, MyList<var> *FutureList,
+                       MyList<var> *tmList, int Symmetry, bool BB, bool CC);
+  bool PatList_Interp_Points(MyList<Patch> *PatL, MyList<var> *VarList,
+                             int NN, double **XX,
+                             double *Shellf, int Symmetry);
+  void aligncheck(double *bbox0, double *bboxl, int lev, double *DH0, int *shape);
+  bool point_locat_gsl(double *pox, MyList<Parallel::gridseg> *gsl);
+  void checkpatchlist(MyList<Patch> *PatL, bool buflog);
+
+  double L2Norm(Patch *Pat, var *vf, MPI_Comm Comm_here);
+  bool PatList_Interp_Points(MyList<Patch> *PatL, MyList<var> *VarList,
+                             int NN, double **XX,
+                             double *Shellf, int Symmetry, MPI_Comm Comm_here);
+#if (PSTR == 1 || PSTR == 2 || PSTR == 3)
+  MyList<Block> *distribute(MyList<Patch> *PatchLIST, int cpusize, int ingfsi, int fngfsi,
+                            bool periodic, int start_rank, int end_rank, int nodes = 0);
+  
+  // Redistribute blocks with time statistics for load balancing
+  MyList<Block> *distribute(MyList<Patch> *PatchLIST, MyList<Block> *OldBlockL,
+                            int cpusize, int ingfsi, int fngfsi,
+                            bool periodic, int start_rank, int end_rank, int nodes = 0);
+#endif
+
+  // Dynamic load balancing: split blocks for heavy ranks
+    void split_heavy_blocks(MyList<Patch> *PatL, int *heavy_ranks, int num_heavy,
+                            int split_factor, int cpusize, int ingfsi, int fngfsi);
+
+    // Check if load balancing is needed based on interpolation times
+    bool check_load_balance_need(double *rank_times, int nprocs, int &num_heavy, int *heavy_ranks);
+  }
+  #endif /*PARALLEL_H */

AMSS_NCKU_source/bssn_class.C

@@ -5819,21 +5819,11 @@ void bssn_class::RestrictProlong(int lev, int YN, bool BB,
 #endif
 
 #if (RPB == 0)
-      Ppc = GH->PatL[lev - 1];
-      while (Ppc)
-      {
-        Pp = GH->PatL[lev];
-        while (Pp)
-        {
 #if (MIXOUTB == 0)
-          Parallel::OutBdLow2Hi(Ppc->data, Pp->data, SynchList_pre, SL, Symmetry);
+      Parallel::OutBdLow2Hi(GH->PatL[lev - 1], GH->PatL[lev], SynchList_pre, SL, Symmetry);
 #elif (MIXOUTB == 1)
-          Parallel::OutBdLow2Himix(Ppc->data, Pp->data, SynchList_pre, SL, Symmetry);
+      Parallel::OutBdLow2Himix(GH->PatL[lev - 1], GH->PatL[lev], SynchList_pre, SL, Symmetry);
 #endif
-          Pp = Pp->next;
-        }
-        Ppc = Ppc->next;
-      }
 #elif (RPB == 1)
       //       Parallel::OutBdLow2Hi_bam(GH->PatL[lev-1],GH->PatL[lev],SynchList_pre,SL,Symmetry);
       Parallel::OutBdLow2Hi_bam(GH->PatL[lev - 1], GH->PatL[lev], SynchList_pre, SL, GH->bdsul[lev], Symmetry);
@@ -5880,21 +5870,11 @@ void bssn_class::RestrictProlong(int lev, int YN, bool BB,
 #endif
 
 #if (RPB == 0)
-      Ppc = GH->PatL[lev - 1];
-      while (Ppc)
-      {
-        Pp = GH->PatL[lev];
-        while (Pp)
-        {
 #if (MIXOUTB == 0)
-          Parallel::OutBdLow2Hi(Ppc->data, Pp->data, SL, SL, Symmetry);
+      Parallel::OutBdLow2Hi(GH->PatL[lev - 1], GH->PatL[lev], SL, SL, Symmetry);
 #elif (MIXOUTB == 1)
-          Parallel::OutBdLow2Himix(Ppc->data, Pp->data, SL, SL, Symmetry);
+      Parallel::OutBdLow2Himix(GH->PatL[lev - 1], GH->PatL[lev], SL, SL, Symmetry);
 #endif
-          Pp = Pp->next;
-        }
-        Ppc = Ppc->next;
-      }
 #elif (RPB == 1)
       //       Parallel::OutBdLow2Hi_bam(GH->PatL[lev-1],GH->PatL[lev],SL,SL,Symmetry);
       Parallel::OutBdLow2Hi_bam(GH->PatL[lev - 1], GH->PatL[lev], SL, SL, GH->bdsul[lev], Symmetry);
@@ -5969,21 +5949,11 @@ void bssn_class::RestrictProlong_aux(int lev, int YN, bool BB,
       Parallel::Sync_cached(GH->PatL[lev - 1], SynchList_pre, Symmetry, sync_cache_rp_coarse[lev]);
 
 #if (RPB == 0)
-      Ppc = GH->PatL[lev - 1];
-      while (Ppc)
-      {
-        Pp = GH->PatL[lev];
-        while (Pp)
-        {
 #if (MIXOUTB == 0)
-          Parallel::OutBdLow2Hi(Ppc->data, Pp->data, SynchList_pre, SL, Symmetry);
+      Parallel::OutBdLow2Hi(GH->PatL[lev - 1], GH->PatL[lev], SynchList_pre, SL, Symmetry);
 #elif (MIXOUTB == 1)
-          Parallel::OutBdLow2Himix(Ppc->data, Pp->data, SynchList_pre, SL, Symmetry);
+      Parallel::OutBdLow2Himix(GH->PatL[lev - 1], GH->PatL[lev], SynchList_pre, SL, Symmetry);
 #endif
-          Pp = Pp->next;
-        }
-        Ppc = Ppc->next;
-      }
 #elif (RPB == 1)
       //       Parallel::OutBdLow2Hi_bam(GH->PatL[lev-1],GH->PatL[lev],SynchList_pre,SL,Symmetry);
       Parallel::OutBdLow2Hi_bam(GH->PatL[lev - 1], GH->PatL[lev], SynchList_pre, SL, GH->bdsul[lev], Symmetry);
@@ -6001,21 +5971,11 @@ void bssn_class::RestrictProlong_aux(int lev, int YN, bool BB,
       Parallel::Sync_cached(GH->PatL[lev - 1], SL, Symmetry, sync_cache_rp_coarse[lev]);
 
 #if (RPB == 0)
-      Ppc = GH->PatL[lev - 1];
-      while (Ppc)
-      {
-        Pp = GH->PatL[lev];
-        while (Pp)
-        {
 #if (MIXOUTB == 0)
-          Parallel::OutBdLow2Hi(Ppc->data, Pp->data, SL, SL, Symmetry);
+      Parallel::OutBdLow2Hi(GH->PatL[lev - 1], GH->PatL[lev], SL, SL, Symmetry);
 #elif (MIXOUTB == 1)
-          Parallel::OutBdLow2Himix(Ppc->data, Pp->data, SL, SL, Symmetry);
+      Parallel::OutBdLow2Himix(GH->PatL[lev - 1], GH->PatL[lev], SL, SL, Symmetry);
 #endif
-          Pp = Pp->next;
-        }
-        Ppc = Ppc->next;
-      }
 #elif (RPB == 1)
       //       Parallel::OutBdLow2Hi_bam(GH->PatL[lev-1],GH->PatL[lev],SL,SL,Symmetry);
       Parallel::OutBdLow2Hi_bam(GH->PatL[lev - 1], GH->PatL[lev], SL, SL, GH->bdsul[lev], Symmetry);
@@ -6076,21 +6036,11 @@ void bssn_class::RestrictProlong(int lev, int YN, bool BB)
       Parallel::Sync_cached(GH->PatL[lev - 1], SynchList_pre, Symmetry, sync_cache_rp_coarse[lev]);
 
 #if (RPB == 0)
-      Ppc = GH->PatL[lev - 1];
-      while (Ppc)
-      {
-        Pp = GH->PatL[lev];
-        while (Pp)
-        {
 #if (MIXOUTB == 0)
-          Parallel::OutBdLow2Hi(Ppc->data, Pp->data, SynchList_pre, SynchList_cor, Symmetry);
+      Parallel::OutBdLow2Hi(GH->PatL[lev - 1], GH->PatL[lev], SynchList_pre, SynchList_cor, Symmetry);
 #elif (MIXOUTB == 1)
-          Parallel::OutBdLow2Himix(Ppc->data, Pp->data, SynchList_pre, SynchList_cor, Symmetry);
+      Parallel::OutBdLow2Himix(GH->PatL[lev - 1], GH->PatL[lev], SynchList_pre, SynchList_cor, Symmetry);
 #endif
-          Pp = Pp->next;
-        }
-        Ppc = Ppc->next;
-      }
 #elif (RPB == 1)
       //       Parallel::OutBdLow2Hi_bam(GH->PatL[lev-1],GH->PatL[lev],SynchList_pre,SynchList_cor,Symmetry);
       Parallel::OutBdLow2Hi_bam(GH->PatL[lev - 1], GH->PatL[lev], SynchList_pre, SynchList_cor, GH->bdsul[lev], Symmetry);
@@ -6110,21 +6060,11 @@ void bssn_class::RestrictProlong(int lev, int YN, bool BB)
       Parallel::Sync_cached(GH->PatL[lev - 1], StateList, Symmetry, sync_cache_rp_coarse[lev]);
 
 #if (RPB == 0)
-      Ppc = GH->PatL[lev - 1];
-      while (Ppc)
-      {
-        Pp = GH->PatL[lev];
-        while (Pp)
-        {
 #if (MIXOUTB == 0)
-          Parallel::OutBdLow2Hi(Ppc->data, Pp->data, StateList, SynchList_cor, Symmetry);
+      Parallel::OutBdLow2Hi(GH->PatL[lev - 1], GH->PatL[lev], StateList, SynchList_cor, Symmetry);
 #elif (MIXOUTB == 1)
-          Parallel::OutBdLow2Himix(Ppc->data, Pp->data, StateList, SynchList_cor, Symmetry);
+      Parallel::OutBdLow2Himix(GH->PatL[lev - 1], GH->PatL[lev], StateList, SynchList_cor, Symmetry);
 #endif
-          Pp = Pp->next;
-        }
-        Ppc = Ppc->next;
-      }
 #elif (RPB == 1)
       //       Parallel::OutBdLow2Hi_bam(GH->PatL[lev-1],GH->PatL[lev],StateList,SynchList_cor,Symmetry);
       Parallel::OutBdLow2Hi_bam(GH->PatL[lev - 1], GH->PatL[lev], StateList, SynchList_cor, GH->bdsul[lev], Symmetry);
@@ -6161,21 +6101,11 @@ void bssn_class::ProlongRestrict(int lev, int YN, bool BB)
       }
 
 #if (RPB == 0)
-      Ppc = GH->PatL[lev - 1];
-      while (Ppc)
-      {
-        Pp = GH->PatL[lev];
-        while (Pp)
-        {
 #if (MIXOUTB == 0)
-          Parallel::OutBdLow2Hi(Ppc->data, Pp->data, SynchList_pre, SynchList_cor, Symmetry);
+      Parallel::OutBdLow2Hi(GH->PatL[lev - 1], GH->PatL[lev], SynchList_pre, SynchList_cor, Symmetry);
 #elif (MIXOUTB == 1)
-          Parallel::OutBdLow2Himix(Ppc->data, Pp->data, SynchList_pre, SynchList_cor, Symmetry);
+      Parallel::OutBdLow2Himix(GH->PatL[lev - 1], GH->PatL[lev], SynchList_pre, SynchList_cor, Symmetry);
 #endif
-          Pp = Pp->next;
-        }
-        Ppc = Ppc->next;
-      }
 #elif (RPB == 1)
       //       Parallel::OutBdLow2Hi_bam(GH->PatL[lev-1],GH->PatL[lev],SynchList_pre,SynchList_cor,Symmetry);
       Parallel::OutBdLow2Hi_bam(GH->PatL[lev - 1], GH->PatL[lev], SynchList_pre, SynchList_cor, GH->bdsul[lev], Symmetry);
@@ -6184,21 +6114,11 @@ void bssn_class::ProlongRestrict(int lev, int YN, bool BB)
     else // no time refinement levels and for all same time levels
     {
 #if (RPB == 0)
-      Ppc = GH->PatL[lev - 1];
-      while (Ppc)
-      {
-        Pp = GH->PatL[lev];
-        while (Pp)
-        {
 #if (MIXOUTB == 0)
-          Parallel::OutBdLow2Hi(Ppc->data, Pp->data, StateList, SynchList_cor, Symmetry);
+      Parallel::OutBdLow2Hi(GH->PatL[lev - 1], GH->PatL[lev], StateList, SynchList_cor, Symmetry);
 #elif (MIXOUTB == 1)
-          Parallel::OutBdLow2Himix(Ppc->data, Pp->data, StateList, SynchList_cor, Symmetry);
+      Parallel::OutBdLow2Himix(GH->PatL[lev - 1], GH->PatL[lev], StateList, SynchList_cor, Symmetry);
 #endif
-          Pp = Pp->next;
-        }
-        Ppc = Ppc->next;
-      }
 #elif (RPB == 1)
       //       Parallel::OutBdLow2Hi_bam(GH->PatL[lev-1],GH->PatL[lev],StateList,SynchList_cor,Symmetry);
       Parallel::OutBdLow2Hi_bam(GH->PatL[lev - 1], GH->PatL[lev], StateList, SynchList_cor, GH->bdsul[lev], Symmetry);

AMSS_NCKU_source/bssn_rhs.f90

@@ -945,103 +945,60 @@
   SSA(2)=SYM
   SSA(3)=ANTI
 
-!!!!!!!!!advection term part
+!!!!!!!!!advection term + Kreiss-Oliger dissipation (merged for cache efficiency)
+! lopsided_kodis shares the symmetry_bd buffer between advection and
+! dissipation, eliminating redundant full-grid copies. For metric variables
+! gxx/gyy/gzz (=dxx/dyy/dzz+1): kodis stencil coefficients sum to zero,
+! so the constant offset has no effect on dissipation.
 
-  call lopsided(ex,X,Y,Z,gxx,gxx_rhs,betax,betay,betaz,Symmetry,SSS)
-  call lopsided(ex,X,Y,Z,gxy,gxy_rhs,betax,betay,betaz,Symmetry,AAS)
-  call lopsided(ex,X,Y,Z,gxz,gxz_rhs,betax,betay,betaz,Symmetry,ASA)
-  call lopsided(ex,X,Y,Z,gyy,gyy_rhs,betax,betay,betaz,Symmetry,SSS)
-  call lopsided(ex,X,Y,Z,gyz,gyz_rhs,betax,betay,betaz,Symmetry,SAA)
-  call lopsided(ex,X,Y,Z,gzz,gzz_rhs,betax,betay,betaz,Symmetry,SSS)
+  call lopsided_kodis(ex,X,Y,Z,gxx,gxx_rhs,betax,betay,betaz,Symmetry,SSS,eps)
+  call lopsided_kodis(ex,X,Y,Z,gxy,gxy_rhs,betax,betay,betaz,Symmetry,AAS,eps)
+  call lopsided_kodis(ex,X,Y,Z,gxz,gxz_rhs,betax,betay,betaz,Symmetry,ASA,eps)
+  call lopsided_kodis(ex,X,Y,Z,gyy,gyy_rhs,betax,betay,betaz,Symmetry,SSS,eps)
+  call lopsided_kodis(ex,X,Y,Z,gyz,gyz_rhs,betax,betay,betaz,Symmetry,SAA,eps)
+  call lopsided_kodis(ex,X,Y,Z,gzz,gzz_rhs,betax,betay,betaz,Symmetry,SSS,eps)
 
-  call lopsided(ex,X,Y,Z,Axx,Axx_rhs,betax,betay,betaz,Symmetry,SSS)
-  call lopsided(ex,X,Y,Z,Axy,Axy_rhs,betax,betay,betaz,Symmetry,AAS)
-  call lopsided(ex,X,Y,Z,Axz,Axz_rhs,betax,betay,betaz,Symmetry,ASA)
-  call lopsided(ex,X,Y,Z,Ayy,Ayy_rhs,betax,betay,betaz,Symmetry,SSS)
-  call lopsided(ex,X,Y,Z,Ayz,Ayz_rhs,betax,betay,betaz,Symmetry,SAA)
-  call lopsided(ex,X,Y,Z,Azz,Azz_rhs,betax,betay,betaz,Symmetry,SSS)
+  call lopsided_kodis(ex,X,Y,Z,Axx,Axx_rhs,betax,betay,betaz,Symmetry,SSS,eps)
+  call lopsided_kodis(ex,X,Y,Z,Axy,Axy_rhs,betax,betay,betaz,Symmetry,AAS,eps)
+  call lopsided_kodis(ex,X,Y,Z,Axz,Axz_rhs,betax,betay,betaz,Symmetry,ASA,eps)
+  call lopsided_kodis(ex,X,Y,Z,Ayy,Ayy_rhs,betax,betay,betaz,Symmetry,SSS,eps)
+  call lopsided_kodis(ex,X,Y,Z,Ayz,Ayz_rhs,betax,betay,betaz,Symmetry,SAA,eps)
+  call lopsided_kodis(ex,X,Y,Z,Azz,Azz_rhs,betax,betay,betaz,Symmetry,SSS,eps)
 
-  call lopsided(ex,X,Y,Z,chi,chi_rhs,betax,betay,betaz,Symmetry,SSS)
-  call lopsided(ex,X,Y,Z,trK,trK_rhs,betax,betay,betaz,Symmetry,SSS)
+  call lopsided_kodis(ex,X,Y,Z,chi,chi_rhs,betax,betay,betaz,Symmetry,SSS,eps)
+  call lopsided_kodis(ex,X,Y,Z,trK,trK_rhs,betax,betay,betaz,Symmetry,SSS,eps)
 
-  call lopsided(ex,X,Y,Z,Gamx,Gamx_rhs,betax,betay,betaz,Symmetry,ASS)
-  call lopsided(ex,X,Y,Z,Gamy,Gamy_rhs,betax,betay,betaz,Symmetry,SAS)
-  call lopsided(ex,X,Y,Z,Gamz,Gamz_rhs,betax,betay,betaz,Symmetry,SSA)
-!!
+  call lopsided_kodis(ex,X,Y,Z,Gamx,Gamx_rhs,betax,betay,betaz,Symmetry,ASS,eps)
+  call lopsided_kodis(ex,X,Y,Z,Gamy,Gamy_rhs,betax,betay,betaz,Symmetry,SAS,eps)
+  call lopsided_kodis(ex,X,Y,Z,Gamz,Gamz_rhs,betax,betay,betaz,Symmetry,SSA,eps)
+
+#if 1 
+!! bam does not apply dissipation on gauge variables
+  call lopsided_kodis(ex,X,Y,Z,Lap,Lap_rhs,betax,betay,betaz,Symmetry,SSS,eps)
+#if (GAUGE == 0 || GAUGE == 1 || GAUGE == 2 || GAUGE == 3 || GAUGE == 4 || GAUGE == 5 || GAUGE == 6 || GAUGE == 7)
+  call lopsided_kodis(ex,X,Y,Z,betax,betax_rhs,betax,betay,betaz,Symmetry,ASS,eps)
+  call lopsided_kodis(ex,X,Y,Z,betay,betay_rhs,betax,betay,betaz,Symmetry,SAS,eps)
+  call lopsided_kodis(ex,X,Y,Z,betaz,betaz_rhs,betax,betay,betaz,Symmetry,SSA,eps)
+#endif
+#if (GAUGE == 0 || GAUGE == 2 || GAUGE == 3 || GAUGE == 6 || GAUGE == 7)
+  call lopsided_kodis(ex,X,Y,Z,dtSfx,dtSfx_rhs,betax,betay,betaz,Symmetry,ASS,eps)
+  call lopsided_kodis(ex,X,Y,Z,dtSfy,dtSfy_rhs,betax,betay,betaz,Symmetry,SAS,eps)
+  call lopsided_kodis(ex,X,Y,Z,dtSfz,dtSfz_rhs,betax,betay,betaz,Symmetry,SSA,eps)
+#endif
+#else
+! No dissipation on gauge variables (advection only)
   call lopsided(ex,X,Y,Z,Lap,Lap_rhs,betax,betay,betaz,Symmetry,SSS)
-
 #if (GAUGE == 0 || GAUGE == 1 || GAUGE == 2 || GAUGE == 3 || GAUGE == 4 || GAUGE == 5 || GAUGE == 6 || GAUGE == 7)
   call lopsided(ex,X,Y,Z,betax,betax_rhs,betax,betay,betaz,Symmetry,ASS)
   call lopsided(ex,X,Y,Z,betay,betay_rhs,betax,betay,betaz,Symmetry,SAS)
   call lopsided(ex,X,Y,Z,betaz,betaz_rhs,betax,betay,betaz,Symmetry,SSA)
 #endif
-
 #if (GAUGE == 0 || GAUGE == 2 || GAUGE == 3 || GAUGE == 6 || GAUGE == 7)
   call lopsided(ex,X,Y,Z,dtSfx,dtSfx_rhs,betax,betay,betaz,Symmetry,ASS)
   call lopsided(ex,X,Y,Z,dtSfy,dtSfy_rhs,betax,betay,betaz,Symmetry,SAS)
   call lopsided(ex,X,Y,Z,dtSfz,dtSfz_rhs,betax,betay,betaz,Symmetry,SSA)
 #endif
-
-  if(eps>0)then 
-! usual Kreiss-Oliger dissipation      
-  call kodis(ex,X,Y,Z,chi,chi_rhs,SSS,Symmetry,eps)
-  call kodis(ex,X,Y,Z,trK,trK_rhs,SSS,Symmetry,eps)
-  call kodis(ex,X,Y,Z,dxx,gxx_rhs,SSS,Symmetry,eps)
-  call kodis(ex,X,Y,Z,gxy,gxy_rhs,AAS,Symmetry,eps)
-  call kodis(ex,X,Y,Z,gxz,gxz_rhs,ASA,Symmetry,eps)
-  call kodis(ex,X,Y,Z,dyy,gyy_rhs,SSS,Symmetry,eps)
-  call kodis(ex,X,Y,Z,gyz,gyz_rhs,SAA,Symmetry,eps)
-  call kodis(ex,X,Y,Z,dzz,gzz_rhs,SSS,Symmetry,eps)
-#if 0
-#define i 42
-#define j 40
-#define k 40
-if(Lev == 1)then
-write(*,*) X(i),Y(j),Z(k)
-write(*,*) "before",Axx_rhs(i,j,k)
-endif
-#undef i
-#undef j
-#undef k
-!!stop
 #endif
-  call kodis(ex,X,Y,Z,Axx,Axx_rhs,SSS,Symmetry,eps)
-#if 0
-#define i 42
-#define j 40
-#define k 40
-if(Lev == 1)then
-write(*,*) X(i),Y(j),Z(k)
-write(*,*) "after",Axx_rhs(i,j,k)
-endif
-#undef i
-#undef j
-#undef k
-!!stop
-#endif
-  call kodis(ex,X,Y,Z,Axy,Axy_rhs,AAS,Symmetry,eps)
-  call kodis(ex,X,Y,Z,Axz,Axz_rhs,ASA,Symmetry,eps)
-  call kodis(ex,X,Y,Z,Ayy,Ayy_rhs,SSS,Symmetry,eps)
-  call kodis(ex,X,Y,Z,Ayz,Ayz_rhs,SAA,Symmetry,eps)
-  call kodis(ex,X,Y,Z,Azz,Azz_rhs,SSS,Symmetry,eps)
-  call kodis(ex,X,Y,Z,Gamx,Gamx_rhs,ASS,Symmetry,eps)
-  call kodis(ex,X,Y,Z,Gamy,Gamy_rhs,SAS,Symmetry,eps)
-  call kodis(ex,X,Y,Z,Gamz,Gamz_rhs,SSA,Symmetry,eps)
-
-#if 1 
-!! bam does not apply dissipation on gauge variables
-  call kodis(ex,X,Y,Z,Lap,Lap_rhs,SSS,Symmetry,eps)
-  call kodis(ex,X,Y,Z,betax,betax_rhs,ASS,Symmetry,eps)
-  call kodis(ex,X,Y,Z,betay,betay_rhs,SAS,Symmetry,eps)
-  call kodis(ex,X,Y,Z,betaz,betaz_rhs,SSA,Symmetry,eps)
-#if (GAUGE == 0 || GAUGE == 2 || GAUGE == 3 || GAUGE == 6 || GAUGE == 7)
-  call kodis(ex,X,Y,Z,dtSfx,dtSfx_rhs,ASS,Symmetry,eps)
-  call kodis(ex,X,Y,Z,dtSfy,dtSfy_rhs,SAS,Symmetry,eps)
-  call kodis(ex,X,Y,Z,dtSfz,dtSfz_rhs,SSA,Symmetry,eps)
-#endif
-#endif
-
-  endif
 
   if(co == 0)then
 ! ham_Res = trR + 2/3 * K^2 - A_ij * A^ij - 16 * PI * rho

AMSS_NCKU_source/cgh.h

@@ -1,92 +1,107 @@
-
-#ifndef CGH_H
-#define CGH_H
-
-#include <mpi.h>
-#include "MyList.h"
-#include "MPatch.h"
-#include "macrodef.h"
-#include "monitor.h"
-#include "Parallel.h"
-
-class cgh
-{
-
-public:
-   int levels, movls, BH_num_in;
-   // information of boxes
-   int *grids;
-   double ***bbox;
-   int ***shape;
-   double ***handle;
-   double ***Porgls;
-   double *Lt;
-
-   // information of Patch list
-   MyList<Patch> **PatL;
-
-// information of OutBdLow2Hi point list and Restrict point list
-#if (RPB == 1)
-   MyList<Parallel::pointstru_bam> **bdsul, **rsul;
-#endif
-
-#if (PSTR == 1 || PSTR == 2 || PSTR == 3)
-   int mylev;
-   int *start_rank, *end_rank;
-   MPI_Comm *Commlev;
-#endif
-
-protected:
-   int ingfs, fngfs;
-   static constexpr double ratio = 0.75;
-   int trfls;
-
-public:
-   cgh(int ingfsi, int fngfsi, int Symmetry, char *filename, int checkrun, monitor *ErrorMonitor);
-
-   ~cgh();
-
-   void compose_cgh(int nprocs);
-   void sethandle(monitor *ErrorMonitor);
-   void checkPatchList(MyList<Patch> *PatL, bool buflog);
-   void Regrid(int Symmetry, int BH_num, double **Porgbr, double **Porg0,
-               MyList<var> *OldList, MyList<var> *StateList,
-               MyList<var> *FutureList, MyList<var> *tmList, bool BB,
-               monitor *ErrorMonitor);
-   void Regrid_fake(int Symmetry, int BH_num, double **Porgbr, double **Porg0,
-                    MyList<var> *OldList, MyList<var> *StateList,
-                    MyList<var> *FutureList, MyList<var> *tmList, bool BB,
-                    monitor *ErrorMonitor);
-   void recompose_cgh(int nprocs, bool *lev_flag,
-                      MyList<var> *OldList, MyList<var> *StateList,
-                      MyList<var> *FutureList, MyList<var> *tmList,
-                      int Symmetry, bool BB);
-   void recompose_cgh_fake(int nprocs, bool *lev_flag,
-                           MyList<var> *OldList, MyList<var> *StateList,
-                           MyList<var> *FutureList, MyList<var> *tmList,
-                           int Symmetry, bool BB);
-   void read_bbox(int Symmetry, char *filename);
-   MyList<Patch> *construct_patchlist(int lev, int Symmetry);
-   bool Interp_One_Point(MyList<var> *VarList,
-                         double *XX, /*input global Cartesian coordinate*/
-                         double *Shellf, int Symmetry);
-   void recompose_cgh_Onelevel(int nprocs, int lev,
-                               MyList<var> *OldList, MyList<var> *StateList,
-                               MyList<var> *FutureList, MyList<var> *tmList,
-                               int Symmetry, bool BB);
-   void Regrid_Onelevel(int lev, int Symmetry, int BH_num, double **Porgbr, double **Porg0,
-                        MyList<var> *OldList, MyList<var> *StateList,
-                        MyList<var> *FutureList, MyList<var> *tmList, bool BB,
-                        monitor *ErrorMonitor);
-   void Regrid_Onelevel_aux(int lev, int Symmetry, int BH_num, double **Porgbr, double **Porg0,
-                            MyList<var> *OldList, MyList<var> *StateList,
-                            MyList<var> *FutureList, MyList<var> *tmList, bool BB,
-                            monitor *ErrorMonitor);
-   void settrfls(const int lev);
-
-#if (PSTR == 1 || PSTR == 2 || PSTR == 3)
-   void construct_mylev(int nprocs);
-#endif
-};
-
-#endif /* CGH_H */
+
+#ifndef CGH_H
+#define CGH_H
+
+#include <mpi.h>
+#include "MyList.h"
+#include "MPatch.h"
+#include "macrodef.h"
+#include "monitor.h"
+#include "Parallel.h"
+
+class cgh
+{
+
+public:
+   int levels, movls, BH_num_in;
+   // information of boxes
+   int *grids;
+   double ***bbox;
+   int ***shape;
+   double ***handle;
+   double ***Porgls;
+   double *Lt;
+
+   // information of Patch list
+   MyList<Patch> **PatL;
+
+// information of OutBdLow2Hi point list and Restrict point list
+#if (RPB == 1)
+   MyList<Parallel::pointstru_bam> **bdsul, **rsul;
+#endif
+
+#if (PSTR == 1 || PSTR == 2 || PSTR == 3)
+   int mylev;
+   int *start_rank, *end_rank;
+   MPI_Comm *Commlev;
+#endif
+
+protected:
+   int ingfs, fngfs;
+   static constexpr double ratio = 0.75;
+   int trfls;
+
+public:
+   cgh(int ingfsi, int fngfsi, int Symmetry, char *filename, int checkrun, monitor *ErrorMonitor);
+
+   ~cgh();
+
+   void compose_cgh(int nprocs);
+   void sethandle(monitor *ErrorMonitor);
+   void checkPatchList(MyList<Patch> *PatL, bool buflog);
+   void Regrid(int Symmetry, int BH_num, double **Porgbr, double **Porg0,
+               MyList<var> *OldList, MyList<var> *StateList,
+               MyList<var> *FutureList, MyList<var> *tmList, bool BB,
+               monitor *ErrorMonitor);
+   void Regrid_fake(int Symmetry, int BH_num, double **Porgbr, double **Porg0,
+                    MyList<var> *OldList, MyList<var> *StateList,
+                    MyList<var> *FutureList, MyList<var> *tmList, bool BB,
+                    monitor *ErrorMonitor);
+   void recompose_cgh(int nprocs, bool *lev_flag,
+                      MyList<var> *OldList, MyList<var> *StateList,
+                      MyList<var> *FutureList, MyList<var> *tmList,
+                      int Symmetry, bool BB);
+   void recompose_cgh_fake(int nprocs, bool *lev_flag,
+                           MyList<var> *OldList, MyList<var> *StateList,
+                           MyList<var> *FutureList, MyList<var> *tmList,
+                           int Symmetry, bool BB);
+   void read_bbox(int Symmetry, char *filename);
+   MyList<Patch> *construct_patchlist(int lev, int Symmetry);
+   bool Interp_One_Point(MyList<var> *VarList,
+                         double *XX, /*input global Cartesian coordinate*/
+                         double *Shellf, int Symmetry);
+   void recompose_cgh_Onelevel(int nprocs, int lev,
+                               MyList<var> *OldList, MyList<var> *StateList,
+                               MyList<var> *FutureList, MyList<var> *tmList,
+                               int Symmetry, bool BB);
+   void Regrid_Onelevel(int lev, int Symmetry, int BH_num, double **Porgbr, double **Porg0,
+                        MyList<var> *OldList, MyList<var> *StateList,
+                        MyList<var> *FutureList, MyList<var> *tmList, bool BB,
+                        monitor *ErrorMonitor);
+   void Regrid_Onelevel_aux(int lev, int Symmetry, int BH_num, double **Porgbr, double **Porg0,
+                            MyList<var> *OldList, MyList<var> *StateList,
+                            MyList<var> *FutureList, MyList<var> *tmList, bool BB,
+                            monitor *ErrorMonitor);
+   void settrfls(const int lev);
+
+#if (PSTR == 1 || PSTR == 2 || PSTR == 3)
+   void construct_mylev(int nprocs);
+#endif
+
+   // Load balancing support
+   bool enable_load_balance;         // Enable load balancing
+   int load_balance_check_interval;  // Check interval (in time steps)
+   int current_time_step;            // Current time step counter
+   double *rank_interp_times;        // Store interpolation times for each rank
+   int *heavy_ranks;                 // Store heavy rank numbers
+   int num_heavy_ranks;              // Number of heavy ranks
+
+   void init_load_balance(int nprocs);
+   void update_interp_time(int rank, double time);
+   bool check_and_rebalance(int nprocs, int lev,
+                           MyList<var> *OldList, MyList<var> *StateList,
+                           MyList<var> *FutureList, MyList<var> *tmList,
+                           int Symmetry, bool BB);
+};
+
+#endif /* CGH_H */

AMSS_NCKU_source/diff_new.f90

@@ -69,10 +69,12 @@
   fy = ZEO
   fz = ZEO
 
+!DIR$ SIMD VECTORLENGTHFOR(KNOWN_INTEGER=8)
+!DIR$ UNROLL PARTIAL(4)
   do k=1,ex(3)-1
   do j=1,ex(2)-1
   do i=1,ex(1)-1
-! x direction   
+! x direction
         if(i+1 <= imax .and. i-1 >= imin)then
 !
 !              - f(i-1) + f(i+1)
@@ -371,6 +373,8 @@
   fxz = ZEO
   fyz = ZEO
 
+!DIR$ SIMD VECTORLENGTHFOR(KNOWN_INTEGER=8)
+!DIR$ UNROLL PARTIAL(4)
   do k=1,ex(3)-1
   do j=1,ex(2)-1
   do i=1,ex(1)-1

AMSS_NCKU_source/fmisc.f90

@@ -883,13 +883,17 @@ subroutine symmetry_bd(ord,extc,func,funcc,SoA)
 
   integer::i
 
+!DIR$ SIMD VECTORLENGTHFOR(KNOWN_INTEGER=8)
   funcc(1:extc(1),1:extc(2),1:extc(3)) = func
+!DIR$ SIMD VECTORLENGTHFOR(KNOWN_INTEGER=8)
    do i=0,ord-1
       funcc(-i,1:extc(2),1:extc(3)) = funcc(i+1,1:extc(2),1:extc(3))*SoA(1)
    enddo
+!DIR$ SIMD VECTORLENGTHFOR(KNOWN_INTEGER=8)
    do i=0,ord-1
       funcc(:,-i,1:extc(3)) = funcc(:,i+1,1:extc(3))*SoA(2)
    enddo
+!DIR$ SIMD VECTORLENGTHFOR(KNOWN_INTEGER=8)
    do i=0,ord-1
       funcc(:,:,-i) = funcc(:,:,i+1)*SoA(3)
    enddo
@@ -1112,6 +1116,7 @@ end subroutine d2dump
 ! Lagrangian polynomial interpolation
 !------------------------------------------------------------------------------
 
+!DIR$ ATTRIBUTES FORCEINLINE :: polint
   subroutine polint(xa, ya, x, y, dy, ordn)
   implicit none
 

AMSS_NCKU_source/kodiss.f90

@@ -65,6 +65,8 @@ real*8,intent(in) :: eps
 !                       dx^4
 
 !  note the sign (-1)^r-1, now r=2
+!DIR$ SIMD VECTORLENGTHFOR(KNOWN_INTEGER=8)
+!DIR$ UNROLL PARTIAL(4)
   do k=1,ex(3)
   do j=1,ex(2)
   do i=1,ex(1)

AMSS_NCKU_source/lopsidediff.f90

@@ -487,6 +487,201 @@ subroutine lopsided(ex,X,Y,Z,f,f_rhs,Sfx,Sfy,Sfz,Symmetry,SoA)
 
   end subroutine lopsided
 
+!-----------------------------------------------------------------------------
+! Combined advection (lopsided) + Kreiss-Oliger dissipation (kodis)
+! Shares the symmetry_bd buffer fh, eliminating one full-grid copy per call.
+! Mathematically identical to calling lopsided then kodis separately.
+!-----------------------------------------------------------------------------
+subroutine lopsided_kodis(ex,X,Y,Z,f,f_rhs,Sfx,Sfy,Sfz,Symmetry,SoA,eps)
+  implicit none
+
+!~~~~~~> Input parameters:
+
+  integer, intent(in)  :: ex(1:3),Symmetry
+  real*8,  intent(in)  :: X(1:ex(1)),Y(1:ex(2)),Z(1:ex(3))
+  real*8,dimension(ex(1),ex(2),ex(3)),intent(in)   :: f,Sfx,Sfy,Sfz
+
+  real*8,dimension(ex(1),ex(2),ex(3)),intent(inout):: f_rhs
+  real*8,dimension(3),intent(in) ::SoA
+  real*8,intent(in) :: eps
+
+!~~~~~~> local variables:
+! note index -2,-1,0, so we have 3 extra points
+  real*8,dimension(-2:ex(1),-2:ex(2),-2:ex(3))   :: fh
+  integer :: imin,jmin,kmin,imax,jmax,kmax,i,j,k
+  real*8 :: dX,dY,dZ
+  real*8 :: d12dx,d12dy,d12dz,d2dx,d2dy,d2dz
+  real*8,  parameter :: ZEO=0.d0,ONE=1.d0, F3=3.d0
+  real*8,  parameter :: TWO=2.d0,F6=6.0d0,F18=1.8d1
+  real*8,  parameter :: F12=1.2d1, F10=1.d1,EIT=8.d0
+  integer, parameter :: NO_SYMM = 0, EQ_SYMM = 1, OCTANT = 2
+! kodis parameters
+  real*8, parameter :: SIX=6.d0,FIT=1.5d1,TWT=2.d1
+  real*8, parameter :: cof=6.4d1   ! 2^6
+
+  dX = X(2)-X(1)
+  dY = Y(2)-Y(1)
+  dZ = Z(2)-Z(1)
+
+  d12dx = ONE/F12/dX
+  d12dy = ONE/F12/dY
+  d12dz = ONE/F12/dZ
+
+  d2dx = ONE/TWO/dX
+  d2dy = ONE/TWO/dY
+  d2dz = ONE/TWO/dZ
+
+  imax = ex(1)
+  jmax = ex(2)
+  kmax = ex(3)
+
+  imin = 1
+  jmin = 1
+  kmin = 1
+  if(Symmetry > NO_SYMM .and. dabs(Z(1)) < dZ) kmin = -2
+  if(Symmetry > EQ_SYMM .and. dabs(X(1)) < dX) imin = -2
+  if(Symmetry > EQ_SYMM .and. dabs(Y(1)) < dY) jmin = -2
+
+! Single symmetry_bd call shared by both advection and dissipation
+  call symmetry_bd(3,ex,f,fh,SoA)
+
+! ---- Advection (lopsided) loop ----
+! upper bound set ex-1 only for efficiency, 
+! the loop body will set ex 0 also
+  do k=1,ex(3)-1
+  do j=1,ex(2)-1
+  do i=1,ex(1)-1
+! x direction   
+    if(Sfx(i,j,k) > ZEO)then
+      if(i+3 <= imax)then
+     f_rhs(i,j,k)=f_rhs(i,j,k)+                                                   &
+                  Sfx(i,j,k)*d12dx*(-F3*fh(i-1,j,k)-F10*fh(i,j,k)+F18*fh(i+1,j,k) &
+                                    -F6*fh(i+2,j,k)+    fh(i+3,j,k))
+     elseif(i+2 <= imax)then
+     f_rhs(i,j,k)=f_rhs(i,j,k)+                                                           &
+                  Sfx(i,j,k)*d12dx*(fh(i-2,j,k)-EIT*fh(i-1,j,k)+EIT*fh(i+1,j,k)-fh(i+2,j,k))
+
+     elseif(i+1 <= imax)then
+     f_rhs(i,j,k)=f_rhs(i,j,k)-                                                   &
+                  Sfx(i,j,k)*d12dx*(-F3*fh(i+1,j,k)-F10*fh(i,j,k)+F18*fh(i-1,j,k) &
+                                    -F6*fh(i-2,j,k)+    fh(i-3,j,k))
+     endif
+   elseif(Sfx(i,j,k) < ZEO)then
+      if(i-3 >= imin)then
+     f_rhs(i,j,k)=f_rhs(i,j,k)-                                                   &
+                  Sfx(i,j,k)*d12dx*(-F3*fh(i+1,j,k)-F10*fh(i,j,k)+F18*fh(i-1,j,k) &
+                                    -F6*fh(i-2,j,k)+    fh(i-3,j,k))
+     elseif(i-2 >= imin)then
+     f_rhs(i,j,k)=f_rhs(i,j,k)+                                                           &
+                  Sfx(i,j,k)*d12dx*(fh(i-2,j,k)-EIT*fh(i-1,j,k)+EIT*fh(i+1,j,k)-fh(i+2,j,k))
+
+     elseif(i-1 >= imin)then
+     f_rhs(i,j,k)=f_rhs(i,j,k)+                                                   &
+                  Sfx(i,j,k)*d12dx*(-F3*fh(i-1,j,k)-F10*fh(i,j,k)+F18*fh(i+1,j,k) &
+                                    -F6*fh(i+2,j,k)+    fh(i+3,j,k))
+     endif
+   endif
+
+! y direction   
+    if(Sfy(i,j,k) > ZEO)then
+      if(j+3 <= jmax)then
+     f_rhs(i,j,k)=f_rhs(i,j,k)+                                                   &
+                  Sfy(i,j,k)*d12dy*(-F3*fh(i,j-1,k)-F10*fh(i,j,k)+F18*fh(i,j+1,k) &
+                                    -F6*fh(i,j+2,k)+    fh(i,j+3,k))
+     elseif(j+2 <= jmax)then
+     f_rhs(i,j,k)=f_rhs(i,j,k)+                                                           &
+                  Sfy(i,j,k)*d12dy*(fh(i,j-2,k)-EIT*fh(i,j-1,k)+EIT*fh(i,j+1,k)-fh(i,j+2,k))
+
+     elseif(j+1 <= jmax)then
+     f_rhs(i,j,k)=f_rhs(i,j,k)-                                                   &
+                  Sfy(i,j,k)*d12dy*(-F3*fh(i,j+1,k)-F10*fh(i,j,k)+F18*fh(i,j-1,k) &
+                                    -F6*fh(i,j-2,k)+    fh(i,j-3,k))
+     endif
+   elseif(Sfy(i,j,k) < ZEO)then
+      if(j-3 >= jmin)then
+     f_rhs(i,j,k)=f_rhs(i,j,k)-                                                   &
+                  Sfy(i,j,k)*d12dy*(-F3*fh(i,j+1,k)-F10*fh(i,j,k)+F18*fh(i,j-1,k) &
+                                    -F6*fh(i,j-2,k)+    fh(i,j-3,k))
+     elseif(j-2 >= jmin)then
+     f_rhs(i,j,k)=f_rhs(i,j,k)+                                                           &
+                  Sfy(i,j,k)*d12dy*(fh(i,j-2,k)-EIT*fh(i,j-1,k)+EIT*fh(i,j+1,k)-fh(i,j+2,k))
+
+     elseif(j-1 >= jmin)then
+     f_rhs(i,j,k)=f_rhs(i,j,k)+                                                   &
+                  Sfy(i,j,k)*d12dy*(-F3*fh(i,j-1,k)-F10*fh(i,j,k)+F18*fh(i,j+1,k) &
+                                    -F6*fh(i,j+2,k)+    fh(i,j+3,k))
+     endif
+   endif
+
+! z direction   
+    if(Sfz(i,j,k) > ZEO)then
+      if(k+3 <= kmax)then
+     f_rhs(i,j,k)=f_rhs(i,j,k)+                                                   &
+                  Sfz(i,j,k)*d12dz*(-F3*fh(i,j,k-1)-F10*fh(i,j,k)+F18*fh(i,j,k+1) &
+                                    -F6*fh(i,j,k+2)+    fh(i,j,k+3))
+     elseif(k+2 <= kmax)then
+     f_rhs(i,j,k)=f_rhs(i,j,k)+                                                           &
+                  Sfz(i,j,k)*d12dz*(fh(i,j,k-2)-EIT*fh(i,j,k-1)+EIT*fh(i,j,k+1)-fh(i,j,k+2))
+
+     elseif(k+1 <= kmax)then
+     f_rhs(i,j,k)=f_rhs(i,j,k)-                                                   &
+                  Sfz(i,j,k)*d12dz*(-F3*fh(i,j,k+1)-F10*fh(i,j,k)+F18*fh(i,j,k-1) &
+                                    -F6*fh(i,j,k-2)+    fh(i,j,k-3))
+     endif
+   elseif(Sfz(i,j,k) < ZEO)then
+      if(k-3 >= kmin)then
+     f_rhs(i,j,k)=f_rhs(i,j,k)-                                                   &
+                  Sfz(i,j,k)*d12dz*(-F3*fh(i,j,k+1)-F10*fh(i,j,k)+F18*fh(i,j,k-1) &
+                                    -F6*fh(i,j,k-2)+    fh(i,j,k-3))
+     elseif(k-2 >= kmin)then
+     f_rhs(i,j,k)=f_rhs(i,j,k)+                                                           &
+                  Sfz(i,j,k)*d12dz*(fh(i,j,k-2)-EIT*fh(i,j,k-1)+EIT*fh(i,j,k+1)-fh(i,j,k+2))
+
+     elseif(k-1 >= kmin)then
+     f_rhs(i,j,k)=f_rhs(i,j,k)+                                                   &
+                  Sfz(i,j,k)*d12dz*(-F3*fh(i,j,k-1)-F10*fh(i,j,k)+F18*fh(i,j,k+1) &
+                                    -F6*fh(i,j,k+2)+    fh(i,j,k+3))
+     endif
+   endif
+  enddo
+  enddo
+  enddo
+
+! ---- Dissipation (kodis) loop ----
+  if(eps > ZEO) then
+  do k=1,ex(3)
+  do j=1,ex(2)
+  do i=1,ex(1)
+
+  if(i-3 >= imin .and. i+3 <= imax .and. &
+     j-3 >= jmin .and. j+3 <= jmax .and. &
+     k-3 >= kmin .and. k+3 <= kmax) then
+   f_rhs(i,j,k)       = f_rhs(i,j,k) + eps/cof *( (     &
+                              (fh(i-3,j,k)+fh(i+3,j,k)) - &
+                          SIX*(fh(i-2,j,k)+fh(i+2,j,k)) + &
+                          FIT*(fh(i-1,j,k)+fh(i+1,j,k)) - &
+                          TWT* fh(i,j,k)            )/dX + &
+                                                  (     &
+                              (fh(i,j-3,k)+fh(i,j+3,k)) - &
+                          SIX*(fh(i,j-2,k)+fh(i,j+2,k)) + &
+                          FIT*(fh(i,j-1,k)+fh(i,j+1,k)) - &
+                          TWT* fh(i,j,k)            )/dY + &
+                                                  (     &
+                              (fh(i,j,k-3)+fh(i,j,k+3)) - &
+                          SIX*(fh(i,j,k-2)+fh(i,j,k+2)) + &
+                          FIT*(fh(i,j,k-1)+fh(i,j,k+1)) - &
+                          TWT* fh(i,j,k)            )/dZ )
+  endif
+
+  enddo
+  enddo
+  enddo
+  endif
+
+  return
+
+  end subroutine lopsided_kodis
+
 #elif (ghost_width == 4)
 ! sixth order code
 ! Compute advection terms in right hand sides of field equations

AMSS_NCKU_source/makefile.inc

@@ -13,7 +13,7 @@ LDLIBS  = -L${MKLROOT}/lib -lmkl_intel_lp64 -lmkl_sequential -lmkl_core -lifcore
 ## Aggressive optimization flags + PGO Phase 2 (profile-guided optimization)
 ## -fprofile-instr-use: use collected profile data to guide optimization decisions
 ##   (branch prediction, basic block layout, inlining, loop unrolling)
-PROFDATA     = /home/amss/AMSS-NCKU/pgo_profile/default.profdata
+PROFDATA     = ../../pgo_profile/default.profdata
 CXXAPPFLAGS  = -O3 -xHost -fp-model fast=2 -fma -ipo \
                -fprofile-instr-use=$(PROFDATA) \
                -Dfortran3 -Dnewc -I${MKLROOT}/include

parallel_plot_helper.py

@@ -0,0 +1,29 @@
+import multiprocessing
+
+def run_plot_task(task):
+    """Execute a single plotting task.
+    
+    Parameters
+    ----------
+    task : tuple
+        A tuple of (function, args_tuple) where function is a callable
+        plotting function and args_tuple contains its arguments.
+    """
+    func, args = task
+    return func(*args)
+
+
+def run_plot_tasks_parallel(plot_tasks):
+    """Execute a list of independent plotting tasks in parallel.
+
+    Uses the 'fork' context to create worker processes so that the main
+    script is NOT re-imported/re-executed in child processes.
+
+    Parameters
+    ----------
+    plot_tasks : list of tuples
+        Each element is (function, args_tuple).
+    """
+    ctx = multiprocessing.get_context('fork')
+    with ctx.Pool() as pool:
+        pool.map(run_plot_task, plot_tasks)

plot_GW_strain_amplitude_xiaoqu.py

@@ -11,6 +11,8 @@
 import numpy                               ## numpy for array operations
 import scipy                               ## scipy for interpolation and signal processing
 import math
+import matplotlib
+matplotlib.use('Agg')                      ## use non-interactive backend for multiprocessing safety
 import matplotlib.pyplot    as     plt     ## matplotlib for plotting
 import os                                  ## os for system/file operations
 

plot_binary_data.py

@@ -8,16 +8,23 @@
 ##
 #################################################
 
+## Restrict OpenMP to one thread per process so that running
+## many workers in parallel does not create an O(workers * BLAS_threads)
+## thread explosion.  The variable MUST be set before numpy/scipy
+## are imported, because the BLAS library reads them only at load time.
+import os
+os.environ.setdefault("OMP_NUM_THREADS",        "1")
+
 import numpy
 import scipy
+import matplotlib
+matplotlib.use('Agg')                      ## use non-interactive backend for multiprocessing safety
 import matplotlib.pyplot    as     plt
 from   matplotlib.colors    import LogNorm
 from   mpl_toolkits.mplot3d import Axes3D
 ## import torch
 import AMSS_NCKU_Input      as input_data
 
-import os
-
 
 #########################################################################################
 
@@ -192,3 +199,19 @@ def get_data_xy( Rmin, Rmax, n, data0, time, figure_title, figure_outdir ):
 
 ####################################################################################
 
+
+####################################################################################
+## Allow this module to be run as a standalone script so that each
+## binary-data plot can be executed in a fresh subprocess whose BLAS
+## environment variables (set above) take effect before numpy loads.
+##
+## Usage:  python3 plot_binary_data.py <filename> <binary_outdir> <figure_outdir>
+####################################################################################
+
+if __name__ == '__main__':
+    import sys
+    if len(sys.argv) != 4:
+        print(f"Usage: {sys.argv[0]} <filename> <binary_outdir> <figure_outdir>")
+        sys.exit(1)
+    plot_binary_data(sys.argv[1], sys.argv[2], sys.argv[3])
+

plot_xiaoqu.py

@@ -8,6 +8,8 @@
 #################################################
 
 import numpy                               ## numpy for array operations
+import matplotlib
+matplotlib.use('Agg')                      ## use non-interactive backend for multiprocessing safety
 import matplotlib.pyplot    as     plt     ## matplotlib for plotting
 from   mpl_toolkits.mplot3d import Axes3D  ## needed for 3D plots
 import glob
@@ -15,6 +17,9 @@ import os                                  ## operating system utilities
 
 import plot_binary_data
 import AMSS_NCKU_Input as input_data
+import subprocess
+import sys
+import multiprocessing
 
 # plt.rcParams['text.usetex'] = True  ## enable LaTeX fonts in plots
 
@@ -50,10 +55,40 @@ def generate_binary_data_plot( binary_outdir, figure_outdir ):
         file_list.append(x)
         print(x)
 
-    ## Plot each file in the list
+    ## Plot each file in parallel using subprocesses.
+    ## Each subprocess is a fresh Python process where the BLAS thread-count
+    ## environment variables (set at the top of plot_binary_data.py) take
+    ## effect before numpy is imported.  This avoids the thread explosion
+    ## that occurs when multiprocessing.Pool with 'fork' context inherits
+    ## already-initialized multi-threaded BLAS from the parent.
+    script = os.path.join( os.path.dirname(__file__), "plot_binary_data.py" )
+    max_workers = min( multiprocessing.cpu_count(), len(file_list) ) if file_list else 0
+
+    running = []
+    failed  = []
     for filename in file_list:
         print(filename)
-        plot_binary_data.plot_binary_data(filename, binary_outdir, figure_outdir)
+        proc = subprocess.Popen(
+            [sys.executable, script, filename, binary_outdir, figure_outdir],
+        )
+        running.append( (proc, filename) )
+        ## Keep at most max_workers subprocesses active at a time
+        if len(running) >= max_workers:
+            p, fn = running.pop(0)
+            p.wait()
+            if p.returncode != 0:
+                failed.append(fn)
+
+    ## Wait for all remaining subprocesses to finish
+    for p, fn in running:
+        p.wait()
+        if p.returncode != 0:
+            failed.append(fn)
+
+    if failed:
+        print( " WARNING: the following binary data plots failed:" )
+        for fn in failed:
+            print( "   ", fn )
 
     print(                        )
     print( " Binary Data Plot Has been Finished " )