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14 changed files with 1800 additions and 655 deletions

3
.gitignore vendored
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@@ -1,2 +1,5 @@
__pycache__ __pycache__
GW150914 GW150914
GW150914*
.codex
docs/

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@@ -9,6 +9,16 @@
################################################################## ##################################################################
##################################################################
## Guard against re-execution by multiprocessing child processes.
## Without this, using 'spawn' or 'forkserver' context would cause every
## worker to re-run the entire script.
if __name__ != '__main__':
import sys as _sys
_sys.exit(0)
################################################################## ##################################################################
## Print program introduction ## Print program introduction
@@ -424,26 +434,31 @@ print(
import plot_xiaoqu import plot_xiaoqu
import plot_GW_strain_amplitude_xiaoqu import plot_GW_strain_amplitude_xiaoqu
from parallel_plot_helper import run_plot_tasks_parallel
plot_tasks = []
## Plot black hole trajectory ## Plot black hole trajectory
plot_xiaoqu.generate_puncture_orbit_plot( binary_results_directory, figure_directory ) plot_tasks.append( ( plot_xiaoqu.generate_puncture_orbit_plot, (binary_results_directory, figure_directory) ) )
plot_xiaoqu.generate_puncture_orbit_plot3D( binary_results_directory, figure_directory ) plot_tasks.append( ( plot_xiaoqu.generate_puncture_orbit_plot3D, (binary_results_directory, figure_directory) ) )
## Plot black hole separation vs. time ## Plot black hole separation vs. time
plot_xiaoqu.generate_puncture_distence_plot( binary_results_directory, figure_directory ) plot_tasks.append( ( plot_xiaoqu.generate_puncture_distence_plot, (binary_results_directory, figure_directory) ) )
## Plot gravitational waveforms (psi4 and strain amplitude) ## Plot gravitational waveforms (psi4 and strain amplitude)
for i in range(input_data.Detector_Number): for i in range(input_data.Detector_Number):
plot_xiaoqu.generate_gravitational_wave_psi4_plot( binary_results_directory, figure_directory, i ) plot_tasks.append( ( plot_xiaoqu.generate_gravitational_wave_psi4_plot, (binary_results_directory, figure_directory, i) ) )
plot_GW_strain_amplitude_xiaoqu.generate_gravitational_wave_amplitude_plot( binary_results_directory, figure_directory, i ) plot_tasks.append( ( plot_GW_strain_amplitude_xiaoqu.generate_gravitational_wave_amplitude_plot, (binary_results_directory, figure_directory, i) ) )
## Plot ADM mass evolution ## Plot ADM mass evolution
for i in range(input_data.Detector_Number): for i in range(input_data.Detector_Number):
plot_xiaoqu.generate_ADMmass_plot( binary_results_directory, figure_directory, i ) plot_tasks.append( ( plot_xiaoqu.generate_ADMmass_plot, (binary_results_directory, figure_directory, i) ) )
## Plot Hamiltonian constraint violation over time ## Plot Hamiltonian constraint violation over time
for i in range(input_data.grid_level): for i in range(input_data.grid_level):
plot_xiaoqu.generate_constraint_check_plot( binary_results_directory, figure_directory, i ) plot_tasks.append( ( plot_xiaoqu.generate_constraint_check_plot, (binary_results_directory, figure_directory, i) ) )
run_plot_tasks_parallel(plot_tasks)
## Plot stored binary data ## Plot stored binary data
plot_xiaoqu.generate_binary_data_plot( binary_results_directory, figure_directory ) plot_xiaoqu.generate_binary_data_plot( binary_results_directory, figure_directory )

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@@ -1,7 +1,8 @@
#ifndef TWO_PUNCTURES_H #ifndef TWO_PUNCTURES_H
#define TWO_PUNCTURES_H #define TWO_PUNCTURES_H
#include <omp.h>
#define StencilSize 19 #define StencilSize 19
#define N_PlaneRelax 1 #define N_PlaneRelax 1
#define NRELAX 200 #define NRELAX 200
@@ -42,6 +43,18 @@ private:
int ntotal; int ntotal;
// ===== Precomputed spectral derivative matrices =====
double *D1_A, *D2_A;
double *D1_B, *D2_B;
double *DF1_phi, *DF2_phi;
// ===== Pre-allocated workspace for LineRelax (per-thread) =====
int max_threads;
double **ws_diag_be, **ws_e_be, **ws_f_be, **ws_b_be, **ws_x_be;
double **ws_l_be, **ws_u_be, **ws_d_be, **ws_y_be;
double **ws_diag_al, **ws_e_al, **ws_f_al, **ws_b_al, **ws_x_al;
double **ws_l_al, **ws_u_al, **ws_d_al, **ws_y_al;
struct parameters struct parameters
{ {
int nvar, n1, n2, n3; int nvar, n1, n2, n3;
@@ -58,6 +71,28 @@ public:
int Newtonmaxit); int Newtonmaxit);
~TwoPunctures(); ~TwoPunctures();
// 02/07: New/modified methods
void allocate_workspace();
void free_workspace();
void precompute_derivative_matrices();
void build_cheb_deriv_matrices(int n, double *D1, double *D2);
void build_fourier_deriv_matrices(int N, double *DF1, double *DF2);
void Derivatives_AB3_MatMul(int nvar, int n1, int n2, int n3, derivs v);
void ThomasAlgorithm_ws(int N, double *b, double *a, double *c, double *x, double *q,
double *l, double *u_ws, double *d, double *y);
void LineRelax_be_omp(double *dv,
int const i, int const k, int const nvar,
int const n1, int const n2, int const n3,
double const *rhs, int const *ncols, int **cols,
double **JFD, int tid);
void LineRelax_al_omp(double *dv,
int const j, int const k, int const nvar,
int const n1, int const n2, int const n3,
double const *rhs, int const *ncols,
int **cols, double **JFD, int tid);
void relax_omp(double *dv, int const nvar, int const n1, int const n2, int const n3,
double const *rhs, int const *ncols, int **cols, double **JFD);
void Solve(); void Solve();
void set_initial_guess(derivs v); void set_initial_guess(derivs v);
int index(int i, int j, int k, int l, int a, int b, int c, int d); int index(int i, int j, int k, int l, int a, int b, int c, int d);
@@ -116,23 +151,11 @@ public:
double BY_KKofxyz(double x, double y, double z); double BY_KKofxyz(double x, double y, double z);
void SetMatrix_JFD(int nvar, int n1, int n2, int n3, derivs u, int *ncols, int **cols, double **Matrix); void SetMatrix_JFD(int nvar, int n1, int n2, int n3, derivs u, int *ncols, int **cols, double **Matrix);
void J_times_dv(int nvar, int n1, int n2, int n3, derivs dv, double *Jdv, derivs u); void J_times_dv(int nvar, int n1, int n2, int n3, derivs dv, double *Jdv, derivs u);
void relax(double *dv, int const nvar, int const n1, int const n2, int const n3,
double const *rhs, int const *ncols, int **cols, double **JFD);
void LineRelax_be(double *dv,
int const i, int const k, int const nvar,
int const n1, int const n2, int const n3,
double const *rhs, int const *ncols, int **cols,
double **JFD);
void JFD_times_dv(int i, int j, int k, int nvar, int n1, int n2, void JFD_times_dv(int i, int j, int k, int nvar, int n1, int n2,
int n3, derivs dv, derivs u, double *values); int n3, derivs dv, derivs u, double *values);
void LinEquations(double A, double B, double X, double R, void LinEquations(double A, double B, double X, double R,
double x, double r, double phi, double x, double r, double phi,
double y, double z, derivs dU, derivs U, double *values); double y, double z, derivs dU, derivs U, double *values);
void LineRelax_al(double *dv,
int const j, int const k, int const nvar,
int const n1, int const n2, int const n3,
double const *rhs, int const *ncols,
int **cols, double **JFD);
void ThomasAlgorithm(int N, double *b, double *a, double *c, double *x, double *q); void ThomasAlgorithm(int N, double *b, double *a, double *c, double *x, double *q);
void Save(char *fname); void Save(char *fname);
// provided by Vasileios Paschalidis (vpaschal@illinois.edu) // provided by Vasileios Paschalidis (vpaschal@illinois.edu)

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@@ -19,48 +19,60 @@
!~~~~~~~> Local variable: !~~~~~~~> Local variable:
real*8, dimension(ex(1),ex(2),ex(3)) :: trA,detg integer :: i,j,k
real*8, dimension(ex(1),ex(2),ex(3)) :: gxx,gyy,gzz real*8 :: lgxx,lgyy,lgzz,ldetg
real*8, dimension(ex(1),ex(2),ex(3)) :: gupxx,gupxy,gupxz,gupyy,gupyz,gupzz real*8 :: lgupxx,lgupxy,lgupxz,lgupyy,lgupyz,lgupzz
real*8 :: ltrA,lscale
real*8, parameter :: F1o3 = 1.D0 / 3.D0, ONE = 1.D0, TWO = 2.D0 real*8, parameter :: F1o3 = 1.D0 / 3.D0, ONE = 1.D0, TWO = 2.D0
!~~~~~~> !~~~~~~>
gxx = dxx + ONE do k=1,ex(3)
gyy = dyy + ONE do j=1,ex(2)
gzz = dzz + ONE do i=1,ex(1)
detg = gxx * gyy * gzz + gxy * gyz * gxz + gxz * gxy * gyz - & lgxx = dxx(i,j,k) + ONE
gxz * gyy * gxz - gxy * gxy * gzz - gxx * gyz * gyz lgyy = dyy(i,j,k) + ONE
gupxx = ( gyy * gzz - gyz * gyz ) / detg lgzz = dzz(i,j,k) + ONE
gupxy = - ( gxy * gzz - gyz * gxz ) / detg
gupxz = ( gxy * gyz - gyy * gxz ) / detg
gupyy = ( gxx * gzz - gxz * gxz ) / detg
gupyz = - ( gxx * gyz - gxy * gxz ) / detg
gupzz = ( gxx * gyy - gxy * gxy ) / detg
trA = gupxx * Axx + gupyy * Ayy + gupzz * Azz & ldetg = lgxx * lgyy * lgzz &
+ TWO * (gupxy * Axy + gupxz * Axz + gupyz * Ayz) + gxy(i,j,k) * gyz(i,j,k) * gxz(i,j,k) &
+ gxz(i,j,k) * gxy(i,j,k) * gyz(i,j,k) &
- gxz(i,j,k) * lgyy * gxz(i,j,k) &
- gxy(i,j,k) * gxy(i,j,k) * lgzz &
- lgxx * gyz(i,j,k) * gyz(i,j,k)
Axx = Axx - F1o3 * gxx * trA lgupxx = ( lgyy * lgzz - gyz(i,j,k) * gyz(i,j,k) ) / ldetg
Axy = Axy - F1o3 * gxy * trA lgupxy = - ( gxy(i,j,k) * lgzz - gyz(i,j,k) * gxz(i,j,k) ) / ldetg
Axz = Axz - F1o3 * gxz * trA lgupxz = ( gxy(i,j,k) * gyz(i,j,k) - lgyy * gxz(i,j,k) ) / ldetg
Ayy = Ayy - F1o3 * gyy * trA lgupyy = ( lgxx * lgzz - gxz(i,j,k) * gxz(i,j,k) ) / ldetg
Ayz = Ayz - F1o3 * gyz * trA lgupyz = - ( lgxx * gyz(i,j,k) - gxy(i,j,k) * gxz(i,j,k) ) / ldetg
Azz = Azz - F1o3 * gzz * trA lgupzz = ( lgxx * lgyy - gxy(i,j,k) * gxy(i,j,k) ) / ldetg
detg = ONE / ( detg ** F1o3 ) ltrA = lgupxx * Axx(i,j,k) + lgupyy * Ayy(i,j,k) &
+ lgupzz * Azz(i,j,k) &
+ TWO * (lgupxy * Axy(i,j,k) + lgupxz * Axz(i,j,k) &
+ lgupyz * Ayz(i,j,k))
gxx = gxx * detg Axx(i,j,k) = Axx(i,j,k) - F1o3 * lgxx * ltrA
gxy = gxy * detg Axy(i,j,k) = Axy(i,j,k) - F1o3 * gxy(i,j,k) * ltrA
gxz = gxz * detg Axz(i,j,k) = Axz(i,j,k) - F1o3 * gxz(i,j,k) * ltrA
gyy = gyy * detg Ayy(i,j,k) = Ayy(i,j,k) - F1o3 * lgyy * ltrA
gyz = gyz * detg Ayz(i,j,k) = Ayz(i,j,k) - F1o3 * gyz(i,j,k) * ltrA
gzz = gzz * detg Azz(i,j,k) = Azz(i,j,k) - F1o3 * lgzz * ltrA
dxx = gxx - ONE lscale = ONE / ( ldetg ** F1o3 )
dyy = gyy - ONE
dzz = gzz - ONE dxx(i,j,k) = lgxx * lscale - ONE
gxy(i,j,k) = gxy(i,j,k) * lscale
gxz(i,j,k) = gxz(i,j,k) * lscale
dyy(i,j,k) = lgyy * lscale - ONE
gyz(i,j,k) = gyz(i,j,k) * lscale
dzz(i,j,k) = lgzz * lscale - ONE
enddo
enddo
enddo
return return
@@ -83,50 +95,70 @@
!~~~~~~~> Local variable: !~~~~~~~> Local variable:
real*8, dimension(ex(1),ex(2),ex(3)) :: trA integer :: i,j,k
real*8, dimension(ex(1),ex(2),ex(3)) :: gxx,gyy,gzz real*8 :: lgxx,lgyy,lgzz,lscale
real*8, dimension(ex(1),ex(2),ex(3)) :: gupxx,gupxy,gupxz,gupyy,gupyz,gupzz real*8 :: lgxy,lgxz,lgyz
real*8 :: lgupxx,lgupxy,lgupxz,lgupyy,lgupyz,lgupzz
real*8 :: ltrA
real*8, parameter :: F1o3 = 1.D0 / 3.D0, ONE = 1.D0, TWO = 2.D0 real*8, parameter :: F1o3 = 1.D0 / 3.D0, ONE = 1.D0, TWO = 2.D0
!~~~~~~> !~~~~~~>
gxx = dxx + ONE do k=1,ex(3)
gyy = dyy + ONE do j=1,ex(2)
gzz = dzz + ONE do i=1,ex(1)
! for g
gupzz = gxx * gyy * gzz + gxy * gyz * gxz + gxz * gxy * gyz - &
gxz * gyy * gxz - gxy * gxy * gzz - gxx * gyz * gyz
gupzz = ONE / ( gupzz ** F1o3 ) ! for g: normalize determinant first
lgxx = dxx(i,j,k) + ONE
lgyy = dyy(i,j,k) + ONE
lgzz = dzz(i,j,k) + ONE
lgxy = gxy(i,j,k)
lgxz = gxz(i,j,k)
lgyz = gyz(i,j,k)
gxx = gxx * gupzz lscale = lgxx * lgyy * lgzz + lgxy * lgyz * lgxz &
gxy = gxy * gupzz + lgxz * lgxy * lgyz - lgxz * lgyy * lgxz &
gxz = gxz * gupzz - lgxy * lgxy * lgzz - lgxx * lgyz * lgyz
gyy = gyy * gupzz
gyz = gyz * gupzz
gzz = gzz * gupzz
dxx = gxx - ONE lscale = ONE / ( lscale ** F1o3 )
dyy = gyy - ONE
dzz = gzz - ONE
! for A
gupxx = ( gyy * gzz - gyz * gyz ) lgxx = lgxx * lscale
gupxy = - ( gxy * gzz - gyz * gxz ) lgxy = lgxy * lscale
gupxz = ( gxy * gyz - gyy * gxz ) lgxz = lgxz * lscale
gupyy = ( gxx * gzz - gxz * gxz ) lgyy = lgyy * lscale
gupyz = - ( gxx * gyz - gxy * gxz ) lgyz = lgyz * lscale
gupzz = ( gxx * gyy - gxy * gxy ) lgzz = lgzz * lscale
trA = gupxx * Axx + gupyy * Ayy + gupzz * Azz & dxx(i,j,k) = lgxx - ONE
+ TWO * (gupxy * Axy + gupxz * Axz + gupyz * Ayz) gxy(i,j,k) = lgxy
gxz(i,j,k) = lgxz
dyy(i,j,k) = lgyy - ONE
gyz(i,j,k) = lgyz
dzz(i,j,k) = lgzz - ONE
Axx = Axx - F1o3 * gxx * trA ! for A: trace-free using normalized metric (det=1, no division needed)
Axy = Axy - F1o3 * gxy * trA lgupxx = ( lgyy * lgzz - lgyz * lgyz )
Axz = Axz - F1o3 * gxz * trA lgupxy = - ( lgxy * lgzz - lgyz * lgxz )
Ayy = Ayy - F1o3 * gyy * trA lgupxz = ( lgxy * lgyz - lgyy * lgxz )
Ayz = Ayz - F1o3 * gyz * trA lgupyy = ( lgxx * lgzz - lgxz * lgxz )
Azz = Azz - F1o3 * gzz * trA lgupyz = - ( lgxx * lgyz - lgxy * lgxz )
lgupzz = ( lgxx * lgyy - lgxy * lgxy )
ltrA = lgupxx * Axx(i,j,k) + lgupyy * Ayy(i,j,k) &
+ lgupzz * Azz(i,j,k) &
+ TWO * (lgupxy * Axy(i,j,k) + lgupxz * Axz(i,j,k) &
+ lgupyz * Ayz(i,j,k))
Axx(i,j,k) = Axx(i,j,k) - F1o3 * lgxx * ltrA
Axy(i,j,k) = Axy(i,j,k) - F1o3 * lgxy * ltrA
Axz(i,j,k) = Axz(i,j,k) - F1o3 * lgxz * ltrA
Ayy(i,j,k) = Ayy(i,j,k) - F1o3 * lgyy * ltrA
Ayz(i,j,k) = Ayz(i,j,k) - F1o3 * lgyz * ltrA
Azz(i,j,k) = Azz(i,j,k) - F1o3 * lgzz * ltrA
enddo
enddo
enddo
return return

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@@ -324,7 +324,6 @@ subroutine symmetry_bd(ord,extc,func,funcc,SoA)
integer::i integer::i
funcc = 0.d0
funcc(1:extc(1),1:extc(2),1:extc(3)) = func funcc(1:extc(1),1:extc(2),1:extc(3)) = func
do i=0,ord-1 do i=0,ord-1
funcc(-i,1:extc(2),1:extc(3)) = funcc(i+2,1:extc(2),1:extc(3))*SoA(1) funcc(-i,1:extc(2),1:extc(3)) = funcc(i+2,1:extc(2),1:extc(3))*SoA(1)
@@ -350,7 +349,6 @@ subroutine symmetry_tbd(ord,extc,func,funcc,SoA)
integer::i integer::i
funcc = 0.d0
funcc(1:extc(1),1:extc(2),1:extc(3)) = func funcc(1:extc(1),1:extc(2),1:extc(3)) = func
do i=0,ord-1 do i=0,ord-1
funcc(-i,1:extc(2),1:extc(3)) = funcc(i+2,1:extc(2),1:extc(3))*SoA(1) funcc(-i,1:extc(2),1:extc(3)) = funcc(i+2,1:extc(2),1:extc(3))*SoA(1)
@@ -379,7 +377,6 @@ subroutine symmetry_stbd(ord,extc,func,funcc,SoA)
integer::i integer::i
funcc = 0.d0
funcc(1:extc(1),1:extc(2),1:extc(3)) = func funcc(1:extc(1),1:extc(2),1:extc(3)) = func
do i=0,ord-1 do i=0,ord-1
funcc(-i,1:extc(2),1:extc(3)) = funcc(i+2,1:extc(2),1:extc(3))*SoA(1) funcc(-i,1:extc(2),1:extc(3)) = funcc(i+2,1:extc(2),1:extc(3))*SoA(1)
@@ -886,14 +883,17 @@ subroutine symmetry_bd(ord,extc,func,funcc,SoA)
integer::i integer::i
funcc = 0.d0 !DIR$ SIMD VECTORLENGTHFOR(KNOWN_INTEGER=8)
funcc(1:extc(1),1:extc(2),1:extc(3)) = func funcc(1:extc(1),1:extc(2),1:extc(3)) = func
!DIR$ SIMD VECTORLENGTHFOR(KNOWN_INTEGER=8)
do i=0,ord-1 do i=0,ord-1
funcc(-i,1:extc(2),1:extc(3)) = funcc(i+1,1:extc(2),1:extc(3))*SoA(1) funcc(-i,1:extc(2),1:extc(3)) = funcc(i+1,1:extc(2),1:extc(3))*SoA(1)
enddo enddo
!DIR$ SIMD VECTORLENGTHFOR(KNOWN_INTEGER=8)
do i=0,ord-1 do i=0,ord-1
funcc(:,-i,1:extc(3)) = funcc(:,i+1,1:extc(3))*SoA(2) funcc(:,-i,1:extc(3)) = funcc(:,i+1,1:extc(3))*SoA(2)
enddo enddo
!DIR$ SIMD VECTORLENGTHFOR(KNOWN_INTEGER=8)
do i=0,ord-1 do i=0,ord-1
funcc(:,:,-i) = funcc(:,:,i+1)*SoA(3) funcc(:,:,-i) = funcc(:,:,i+1)*SoA(3)
enddo enddo
@@ -912,7 +912,6 @@ subroutine symmetry_tbd(ord,extc,func,funcc,SoA)
integer::i integer::i
funcc = 0.d0
funcc(1:extc(1),1:extc(2),1:extc(3)) = func funcc(1:extc(1),1:extc(2),1:extc(3)) = func
do i=0,ord-1 do i=0,ord-1
funcc(-i,1:extc(2),1:extc(3)) = funcc(i+1,1:extc(2),1:extc(3))*SoA(1) funcc(-i,1:extc(2),1:extc(3)) = funcc(i+1,1:extc(2),1:extc(3))*SoA(1)
@@ -941,7 +940,6 @@ subroutine symmetry_stbd(ord,extc,func,funcc,SoA)
integer::i integer::i
funcc = 0.d0
funcc(1:extc(1),1:extc(2),1:extc(3)) = func funcc(1:extc(1),1:extc(2),1:extc(3)) = func
do i=0,ord-1 do i=0,ord-1
funcc(-i,1:extc(2),1:extc(3)) = funcc(i+1,1:extc(2),1:extc(3))*SoA(1) funcc(-i,1:extc(2),1:extc(3)) = funcc(i+1,1:extc(2),1:extc(3))*SoA(1)
@@ -1117,27 +1115,21 @@ end subroutine d2dump
!------------------------------------------------------------------------------ !------------------------------------------------------------------------------
! Lagrangian polynomial interpolation ! Lagrangian polynomial interpolation
!------------------------------------------------------------------------------ !------------------------------------------------------------------------------
#ifndef POLINT6_USE_BARYCENTRIC
#define POLINT6_USE_BARYCENTRIC 1
#endif
subroutine polint(xa,ya,x,y,dy,ordn) !DIR$ ATTRIBUTES FORCEINLINE :: polint6_neville
subroutine polint6_neville(xa, ya, x, y, dy)
implicit none implicit none
!~~~~~~> Input Parameter: real*8, dimension(6), intent(in) :: xa, ya
integer,intent(in) :: ordn
real*8, dimension(ordn), intent(in) :: xa,ya
real*8, intent(in) :: x real*8, intent(in) :: x
real*8, intent(out) :: y, dy real*8, intent(out) :: y, dy
!~~~~~~> Other parameter: integer :: i, m, ns, n_m
real*8, dimension(6) :: c, d, ho
integer :: m,n,ns real*8 :: dif, dift, hp, h, den_val
real*8, dimension(ordn) :: c,d,den,ho
real*8 :: dif,dift
!~~~~~~>
n=ordn
m=ordn
c = ya c = ya
d = ya d = ya
@@ -1145,27 +1137,38 @@ end subroutine d2dump
ns = 1 ns = 1
dif = abs(x - xa(1)) dif = abs(x - xa(1))
do m=1,n
dift=abs(x-xa(m)) do i = 2, 6
dift = abs(x - xa(i))
if (dift < dif) then if (dift < dif) then
ns=m ns = i
dif = dift dif = dift
end if end if
end do end do
y = ya(ns) y = ya(ns)
ns = ns - 1 ns = ns - 1
do m=1,n-1
den(1:n-m)=ho(1:n-m)-ho(1+m:n) do m = 1, 5
if (any(den(1:n-m) == 0.0))then n_m = 6 - m
do i = 1, n_m
hp = ho(i)
h = ho(i+m)
den_val = hp - h
if (den_val == 0.0d0) then
write(*,*) 'failure in polint for point',x write(*,*) 'failure in polint for point',x
write(*,*) 'with input points: ',xa write(*,*) 'with input points: ',xa
stop stop
end if end if
den(1:n-m)=(c(2:n-m+1)-d(1:n-m))/den(1:n-m)
d(1:n-m)=ho(1+m:n)*den(1:n-m) den_val = (c(i+1) - d(i)) / den_val
c(1:n-m)=ho(1:n-m)*den(1:n-m)
if (2*ns < n-m) then d(i) = h * den_val
c(i) = hp * den_val
end do
if (2 * ns < n_m) then
dy = c(ns + 1) dy = c(ns + 1)
else else
dy = d(ns) dy = d(ns)
@@ -1175,43 +1178,227 @@ end subroutine d2dump
end do end do
return return
end subroutine polint6_neville
!DIR$ ATTRIBUTES FORCEINLINE :: polint6_barycentric
subroutine polint6_barycentric(xa, ya, x, y, dy)
implicit none
real*8, dimension(6), intent(in) :: xa, ya
real*8, intent(in) :: x
real*8, intent(out) :: y, dy
integer :: i, j
logical :: is_uniform
real*8, dimension(6) :: lambda
real*8 :: dx, den_i, term, num, den, step, tol
real*8, parameter :: c_uniform(6) = (/ -1.d0, 5.d0, -10.d0, 10.d0, -5.d0, 1.d0 /)
do i = 1, 6
if (x == xa(i)) then
y = ya(i)
dy = 0.d0
return
end if
end do
step = xa(2) - xa(1)
is_uniform = (step /= 0.d0)
if (is_uniform) then
tol = 64.d0 * epsilon(1.d0) * max(1.d0, abs(step))
do i = 3, 6
if (abs((xa(i) - xa(i-1)) - step) > tol) then
is_uniform = .false.
exit
end if
end do
end if
if (is_uniform) then
num = 0.d0
den = 0.d0
do i = 1, 6
term = c_uniform(i) / (x - xa(i))
num = num + term * ya(i)
den = den + term
end do
y = num / den
dy = 0.d0
return
end if
do i = 1, 6
den_i = 1.d0
do j = 1, 6
if (j /= i) then
dx = xa(i) - xa(j)
if (dx == 0.0d0) then
write(*,*) 'failure in polint for point',x
write(*,*) 'with input points: ',xa
stop
end if
den_i = den_i * dx
end if
end do
lambda(i) = 1.d0 / den_i
end do
num = 0.d0
den = 0.d0
do i = 1, 6
term = lambda(i) / (x - xa(i))
num = num + term * ya(i)
den = den + term
end do
y = num / den
dy = 0.d0
return
end subroutine polint6_barycentric
!DIR$ ATTRIBUTES FORCEINLINE :: polint
subroutine polint(xa, ya, x, y, dy, ordn)
implicit none
integer, intent(in) :: ordn
real*8, dimension(ordn), intent(in) :: xa, ya
real*8, intent(in) :: x
real*8, intent(out) :: y, dy
integer :: i, m, ns, n_m
real*8, dimension(ordn) :: c, d, ho
real*8 :: dif, dift, hp, h, den_val
if (ordn == 6) then
#if POLINT6_USE_BARYCENTRIC
call polint6_barycentric(xa, ya, x, y, dy)
#else
call polint6_neville(xa, ya, x, y, dy)
#endif
return
end if
c = ya
d = ya
ho = xa - x
ns = 1
dif = abs(x - xa(1))
do i = 2, ordn
dift = abs(x - xa(i))
if (dift < dif) then
ns = i
dif = dift
end if
end do
y = ya(ns)
ns = ns - 1
do m = 1, ordn - 1
n_m = ordn - m
do i = 1, n_m
hp = ho(i)
h = ho(i+m)
den_val = hp - h
if (den_val == 0.0d0) then
write(*,*) 'failure in polint for point',x
write(*,*) 'with input points: ',xa
stop
end if
den_val = (c(i+1) - d(i)) / den_val
d(i) = h * den_val
c(i) = hp * den_val
end do
if (2 * ns < n_m) then
dy = c(ns + 1)
else
dy = d(ns)
ns = ns - 1
end if
y = y + dy
end do
return
end subroutine polint end subroutine polint
!------------------------------------------------------------------------------ !------------------------------------------------------------------------------
! Compute Lagrange interpolation basis weights for one target point.
!------------------------------------------------------------------------------
!DIR$ ATTRIBUTES FORCEINLINE :: polint_lagrange_weights
subroutine polint_lagrange_weights(xa, x, w, ordn)
implicit none
integer, intent(in) :: ordn
real*8, dimension(1:ordn), intent(in) :: xa
real*8, intent(in) :: x
real*8, dimension(1:ordn), intent(out) :: w
integer :: i, j
real*8 :: num, den, dx
do i = 1, ordn
num = 1.d0
den = 1.d0
do j = 1, ordn
if (j /= i) then
dx = xa(i) - xa(j)
if (dx == 0.0d0) then
write(*,*) 'failure in polint for point',x
write(*,*) 'with input points: ',xa
stop
end if
num = num * (x - xa(j))
den = den * dx
end if
end do
w(i) = num / den
end do
return
end subroutine polint_lagrange_weights
!------------------------------------------------------------------------------
! !
! interpolation in 2 dimensions, follow yx order ! interpolation in 2 dimensions, follow yx order
! !
!------------------------------------------------------------------------------ !------------------------------------------------------------------------------
subroutine polin2(x1a,x2a,ya,x1,x2,y,dy,ordn) subroutine polin2(x1a,x2a,ya,x1,x2,y,dy,ordn)
implicit none implicit none
!~~~~~~> Input parameters:
integer,intent(in) :: ordn integer,intent(in) :: ordn
real*8, dimension(1:ordn), intent(in) :: x1a,x2a real*8, dimension(1:ordn), intent(in) :: x1a,x2a
real*8, dimension(1:ordn,1:ordn), intent(in) :: ya real*8, dimension(1:ordn,1:ordn), intent(in) :: ya
real*8, intent(in) :: x1,x2 real*8, intent(in) :: x1,x2
real*8, intent(out) :: y,dy real*8, intent(out) :: y,dy
!~~~~~~> Other parameters: #ifdef POLINT_LEGACY_ORDER
integer :: i,m integer :: i,m
real*8, dimension(ordn) :: ymtmp real*8, dimension(ordn) :: ymtmp
real*8, dimension(ordn) :: yntmp real*8, dimension(ordn) :: yntmp
m=size(x1a) m=size(x1a)
do i=1,m do i=1,m
yntmp=ya(i,:) yntmp=ya(i,:)
call polint(x2a,yntmp,x2,ymtmp(i),dy,ordn) call polint(x2a,yntmp,x2,ymtmp(i),dy,ordn)
end do end do
call polint(x1a,ymtmp,x1,y,dy,ordn) call polint(x1a,ymtmp,x1,y,dy,ordn)
#else
integer :: j
real*8, dimension(ordn) :: ymtmp
real*8 :: dy_temp
do j=1,ordn
call polint(x1a, ya(:,j), x1, ymtmp(j), dy_temp, ordn)
end do
call polint(x2a, ymtmp, x2, y, dy, ordn)
#endif
return return
end subroutine polin2 end subroutine polin2
!------------------------------------------------------------------------------ !------------------------------------------------------------------------------
! !
@@ -1219,18 +1406,15 @@ end subroutine d2dump
! !
!------------------------------------------------------------------------------ !------------------------------------------------------------------------------
subroutine polin3(x1a,x2a,x3a,ya,x1,x2,x3,y,dy,ordn) subroutine polin3(x1a,x2a,x3a,ya,x1,x2,x3,y,dy,ordn)
implicit none implicit none
!~~~~~~> Input parameters:
integer,intent(in) :: ordn integer,intent(in) :: ordn
real*8, dimension(1:ordn), intent(in) :: x1a,x2a,x3a real*8, dimension(1:ordn), intent(in) :: x1a,x2a,x3a
real*8, dimension(1:ordn,1:ordn,1:ordn), intent(in) :: ya real*8, dimension(1:ordn,1:ordn,1:ordn), intent(in) :: ya
real*8, intent(in) :: x1,x2,x3 real*8, intent(in) :: x1,x2,x3
real*8, intent(out) :: y,dy real*8, intent(out) :: y,dy
!~~~~~~> Other parameters: #ifdef POLINT_LEGACY_ORDER
integer :: i,j,m,n integer :: i,j,m,n
real*8, dimension(ordn,ordn) :: yatmp real*8, dimension(ordn,ordn) :: yatmp
real*8, dimension(ordn) :: ymtmp real*8, dimension(ordn) :: ymtmp
@@ -1239,24 +1423,40 @@ end subroutine d2dump
m=size(x1a) m=size(x1a)
n=size(x2a) n=size(x2a)
do i=1,m do i=1,m
do j=1,n do j=1,n
yqtmp=ya(i,j,:) yqtmp=ya(i,j,:)
call polint(x3a,yqtmp,x3,yatmp(i,j),dy,ordn) call polint(x3a,yqtmp,x3,yatmp(i,j),dy,ordn)
end do end do
yntmp=yatmp(i,:) yntmp=yatmp(i,:)
call polint(x2a,yntmp,x2,ymtmp(i),dy,ordn) call polint(x2a,yntmp,x2,ymtmp(i),dy,ordn)
end do
call polint(x1a,ymtmp,x1,y,dy,ordn)
#else
integer :: i, j, k
real*8, dimension(ordn) :: w1, w2
real*8, dimension(ordn) :: ymtmp
real*8 :: yx_sum, x_sum
call polint_lagrange_weights(x1a, x1, w1, ordn)
call polint_lagrange_weights(x2a, x2, w2, ordn)
do k = 1, ordn
yx_sum = 0.d0
do j = 1, ordn
x_sum = 0.d0
do i = 1, ordn
x_sum = x_sum + w1(i) * ya(i,j,k)
end do
yx_sum = yx_sum + w2(j) * x_sum
end do
ymtmp(k) = yx_sum
end do end do
call polint(x1a,ymtmp,x1,y,dy,ordn) call polint(x3a, ymtmp, x3, y, dy, ordn)
#endif
return return
end subroutine polin3 end subroutine polin3
!-------------------------------------------------------------------------------------- !--------------------------------------------------------------------------------------
! calculate L2norm ! calculate L2norm
@@ -1276,7 +1476,9 @@ end subroutine d2dump
real*8 :: dX, dY, dZ real*8 :: dX, dY, dZ
integer::imin,jmin,kmin integer::imin,jmin,kmin
integer::imax,jmax,kmax integer::imax,jmax,kmax
integer::i,j,k integer::i,j,k,n_elements
real*8, dimension(:), allocatable :: f_flat
real*8, external :: DDOT
dX = X(2) - X(1) dX = X(2) - X(1)
dY = Y(2) - Y(1) dY = Y(2) - Y(1)
@@ -1300,13 +1502,89 @@ if(dabs(X(1)-xmin) < dX) imin = 1
if(dabs(Y(1)-ymin) < dY) jmin = 1 if(dabs(Y(1)-ymin) < dY) jmin = 1
if(dabs(Z(1)-zmin) < dZ) kmin = 1 if(dabs(Z(1)-zmin) < dZ) kmin = 1
f_out = sum(f(imin:imax,jmin:jmax,kmin:kmax)*f(imin:imax,jmin:jmax,kmin:kmax)) n_elements = (imax-imin+1)*(jmax-jmin+1)*(kmax-kmin+1)
allocate(f_flat(n_elements))
f_flat = reshape(f(imin:imax,jmin:jmax,kmin:kmax), [n_elements])
f_out = DDOT(n_elements, f_flat, 1, f_flat, 1)
deallocate(f_flat)
f_out = f_out*dX*dY*dZ f_out = f_out*dX*dY*dZ
return return
end subroutine l2normhelper end subroutine l2normhelper
!--------------------------------------------------------------------------------------
subroutine l2normhelper7(ex, X, Y, Z,xmin,ymin,zmin,xmax,ymax,zmax,&
f1,f2,f3,f4,f5,f6,f7,f_out,gw)
implicit none
!~~~~~~> Input parameters:
integer,intent(in ):: ex(1:3)
real*8, intent(in ):: X(1:ex(1)),Y(1:ex(2)),Z(1:ex(3)),xmin,ymin,zmin,xmax,ymax,zmax
integer,intent(in)::gw
real*8, dimension(ex(1),ex(2),ex(3)),intent(in) :: f1,f2,f3,f4,f5,f6,f7
real*8, intent(out) :: f_out(7)
!~~~~~~> Other variables:
real*8 :: dX, dY, dZ
integer::imin,jmin,kmin
integer::imax,jmax,kmax
integer::i,j,k
real*8 :: s1,s2,s3,s4,s5,s6,s7
dX = X(2) - X(1)
dY = Y(2) - Y(1)
dZ = Z(2) - Z(1)
imin = gw+1
jmin = gw+1
kmin = gw+1
imax = ex(1) - gw
jmax = ex(2) - gw
kmax = ex(3) - gw
if(dabs(X(ex(1))-xmax) < dX) imax = ex(1)
if(dabs(Y(ex(2))-ymax) < dY) jmax = ex(2)
if(dabs(Z(ex(3))-zmax) < dZ) kmax = ex(3)
if(dabs(X(1)-xmin) < dX) imin = 1
if(dabs(Y(1)-ymin) < dY) jmin = 1
if(dabs(Z(1)-zmin) < dZ) kmin = 1
s1 = 0.d0
s2 = 0.d0
s3 = 0.d0
s4 = 0.d0
s5 = 0.d0
s6 = 0.d0
s7 = 0.d0
do k=kmin,kmax
do j=jmin,jmax
!DIR$ SIMD REDUCTION(+:s1,s2,s3,s4,s5,s6,s7)
do i=imin,imax
s1 = s1 + f1(i,j,k)*f1(i,j,k)
s2 = s2 + f2(i,j,k)*f2(i,j,k)
s3 = s3 + f3(i,j,k)*f3(i,j,k)
s4 = s4 + f4(i,j,k)*f4(i,j,k)
s5 = s5 + f5(i,j,k)*f5(i,j,k)
s6 = s6 + f6(i,j,k)*f6(i,j,k)
s7 = s7 + f7(i,j,k)*f7(i,j,k)
enddo
enddo
enddo
f_out(1) = s1*dX*dY*dZ
f_out(2) = s2*dX*dY*dZ
f_out(3) = s3*dX*dY*dZ
f_out(4) = s4*dX*dY*dZ
f_out(5) = s5*dX*dY*dZ
f_out(6) = s6*dX*dY*dZ
f_out(7) = s7*dX*dY*dZ
return
end subroutine l2normhelper7
!-------------------------------------------------------------------------------------- !--------------------------------------------------------------------------------------
! calculate L2norm especially for shell Blocks ! calculate L2norm especially for shell Blocks
subroutine l2normhelper_sh(ex, X, Y, Z,xmin,ymin,zmin,xmax,ymax,zmax,& subroutine l2normhelper_sh(ex, X, Y, Z,xmin,ymin,zmin,xmax,ymax,zmax,&
@@ -1325,7 +1603,9 @@ f_out = f_out*dX*dY*dZ
real*8 :: dX, dY, dZ real*8 :: dX, dY, dZ
integer::imin,jmin,kmin integer::imin,jmin,kmin
integer::imax,jmax,kmax integer::imax,jmax,kmax
integer::i,j,k integer::i,j,k,n_elements
real*8, dimension(:), allocatable :: f_flat
real*8, external :: DDOT
real*8 :: PIo4 real*8 :: PIo4
@@ -1388,7 +1668,11 @@ if(Symmetry==2)then
if(dabs(ymin+gw*dY)<dY.and.Y(1)<0.d0) jmin = gw+1 if(dabs(ymin+gw*dY)<dY.and.Y(1)<0.d0) jmin = gw+1
endif endif
f_out = sum(f(imin:imax,jmin:jmax,kmin:kmax)*f(imin:imax,jmin:jmax,kmin:kmax)) n_elements = (imax-imin+1)*(jmax-jmin+1)*(kmax-kmin+1)
allocate(f_flat(n_elements))
f_flat = reshape(f(imin:imax,jmin:jmax,kmin:kmax), [n_elements])
f_out = DDOT(n_elements, f_flat, 1, f_flat, 1)
deallocate(f_flat)
f_out = f_out*dX*dY*dZ f_out = f_out*dX*dY*dZ
@@ -1416,6 +1700,8 @@ f_out = f_out*dX*dY*dZ
integer::imin,jmin,kmin integer::imin,jmin,kmin
integer::imax,jmax,kmax integer::imax,jmax,kmax
integer::i,j,k integer::i,j,k
real*8, dimension(:), allocatable :: f_flat
real*8, external :: DDOT
real*8 :: PIo4 real*8 :: PIo4
@@ -1478,11 +1764,11 @@ if(Symmetry==2)then
if(dabs(ymin+gw*dY)<dY.and.Y(1)<0.d0) jmin = gw+1 if(dabs(ymin+gw*dY)<dY.and.Y(1)<0.d0) jmin = gw+1
endif endif
f_out = sum(f(imin:imax,jmin:jmax,kmin:kmax)*f(imin:imax,jmin:jmax,kmin:kmax))
f_out = f_out
Nout = (imax-imin+1)*(jmax-jmin+1)*(kmax-kmin+1) Nout = (imax-imin+1)*(jmax-jmin+1)*(kmax-kmin+1)
allocate(f_flat(Nout))
f_flat = reshape(f(imin:imax,jmin:jmax,kmin:kmax), [Nout])
f_out = DDOT(Nout, f_flat, 1, f_flat, 1)
deallocate(f_flat)
return return
@@ -1584,8 +1870,11 @@ Nout = (imax-imin+1)*(jmax-jmin+1)*(kmax-kmin+1)
! f=3/8*f_1 + 3/4*f_2 - 1/8*f_3 ! f=3/8*f_1 + 3/4*f_2 - 1/8*f_3
real*8,parameter::C1=3.d0/8.d0,C2=3.d0/4.d0,C3=-1.d0/8.d0 real*8,parameter::C1=3.d0/8.d0,C2=3.d0/4.d0,C3=-1.d0/8.d0
integer :: i,j,k
fout = C1*f1+C2*f2+C3*f3 do concurrent (k=1:ext(3), j=1:ext(2), i=1:ext(1))
fout(i,j,k) = C1*f1(i,j,k)+C2*f2(i,j,k)+C3*f3(i,j,k)
end do
return return
@@ -1680,6 +1969,7 @@ Nout = (imax-imin+1)*(jmax-jmin+1)*(kmax-kmin+1)
real*8, dimension(ORDN,ORDN) :: tmp2 real*8, dimension(ORDN,ORDN) :: tmp2
real*8, dimension(ORDN) :: tmp1 real*8, dimension(ORDN) :: tmp1
real*8, dimension(3) :: SoAh real*8, dimension(3) :: SoAh
real*8, external :: DDOT
! +1 because c++ gives 0 for first point ! +1 because c++ gives 0 for first point
cxB = inds+1 cxB = inds+1
@@ -1725,10 +2015,7 @@ Nout = (imax-imin+1)*(jmax-jmin+1)*(kmax-kmin+1)
tmp1 = tmp1 + coef(ORDN+m)*tmp2(:,m) tmp1 = tmp1 + coef(ORDN+m)*tmp2(:,m)
enddo enddo
f_int=0 f_int = DDOT(ORDN, coef(1:ORDN), 1, tmp1, 1)
do m=1,ORDN
f_int = f_int + coef(m)*tmp1(m)
enddo
return return
@@ -1758,6 +2045,7 @@ Nout = (imax-imin+1)*(jmax-jmin+1)*(kmax-kmin+1)
real*8, dimension(ORDN,ORDN) :: ya real*8, dimension(ORDN,ORDN) :: ya
real*8, dimension(ORDN) :: tmp1 real*8, dimension(ORDN) :: tmp1
real*8, dimension(2) :: SoAh real*8, dimension(2) :: SoAh
real*8, external :: DDOT
! +1 because c++ gives 0 for first point ! +1 because c++ gives 0 for first point
cxB = inds(1:2)+1 cxB = inds(1:2)+1
@@ -1792,10 +2080,7 @@ Nout = (imax-imin+1)*(jmax-jmin+1)*(kmax-kmin+1)
tmp1 = tmp1 + coef(ORDN+m)*ya(:,m) tmp1 = tmp1 + coef(ORDN+m)*ya(:,m)
enddo enddo
f_int=0 f_int = DDOT(ORDN, coef(1:ORDN), 1, tmp1, 1)
do m=1,ORDN
f_int = f_int + coef(m)*tmp1(m)
enddo
return return
@@ -1826,6 +2111,7 @@ Nout = (imax-imin+1)*(jmax-jmin+1)*(kmax-kmin+1)
real*8, dimension(ORDN) :: ya real*8, dimension(ORDN) :: ya
real*8 :: SoAh real*8 :: SoAh
integer,dimension(3) :: inds integer,dimension(3) :: inds
real*8, external :: DDOT
! +1 because c++ gives 0 for first point ! +1 because c++ gives 0 for first point
inds = indsi + 1 inds = indsi + 1
@@ -1886,10 +2172,7 @@ Nout = (imax-imin+1)*(jmax-jmin+1)*(kmax-kmin+1)
write(*,*)"error in global_interpind1d, not recognized dumyd = ",dumyd write(*,*)"error in global_interpind1d, not recognized dumyd = ",dumyd
endif endif
f_int=0 f_int = DDOT(ORDN, coef, 1, ya, 1)
do m=1,ORDN
f_int = f_int + coef(m)*ya(m)
enddo
return return
@@ -2128,17 +2411,25 @@ Nout = (imax-imin+1)*(jmax-jmin+1)*(kmax-kmin+1)
real*8 :: gont real*8 :: gont
integer :: i integer :: i
real*8, parameter, dimension(0:20) :: fact_table = [ &
1.d0, 1.d0, 2.d0, 6.d0, 24.d0, 120.d0, 720.d0, 5040.d0, 40320.d0, &
362880.d0, 3628800.d0, 39916800.d0, 479001600.d0, 6227020800.d0, &
87178291200.d0, 1307674368000.d0, 20922789888000.d0, &
355687428096000.d0, 6402373705728000.d0, 121645100408832000.d0, &
2432902008176640000.d0 ]
! sanity check ! sanity check
if(N < 0)then if(N < 0)then
write(*,*) "ffact: error input for factorial" write(*,*) "ffact: error input for factorial"
gont = 1.d0
return return
endif endif
gont = 1.d0 if(N <= 20)then
do i=1,N gont = fact_table(N)
gont = gont*i else
enddo gont = exp(log_gamma(dble(N+1)))
endif
return return

View File

@@ -13,6 +13,7 @@
#define f_global_interpind2d global_interpind2d #define f_global_interpind2d global_interpind2d
#define f_global_interpind1d global_interpind1d #define f_global_interpind1d global_interpind1d
#define f_l2normhelper l2normhelper #define f_l2normhelper l2normhelper
#define f_l2normhelper7 l2normhelper7
#define f_l2normhelper_sh l2normhelper_sh #define f_l2normhelper_sh l2normhelper_sh
#define f_l2normhelper_sh_rms l2normhelper_sh_rms #define f_l2normhelper_sh_rms l2normhelper_sh_rms
#define f_average average #define f_average average
@@ -42,6 +43,7 @@
#define f_global_interpind2d GLOBAL_INTERPIND2D #define f_global_interpind2d GLOBAL_INTERPIND2D
#define f_global_interpind1d GLOBAL_INTERPIND1D #define f_global_interpind1d GLOBAL_INTERPIND1D
#define f_l2normhelper L2NORMHELPER #define f_l2normhelper L2NORMHELPER
#define f_l2normhelper7 L2NORMHELPER7
#define f_l2normhelper_sh L2NORMHELPER_SH #define f_l2normhelper_sh L2NORMHELPER_SH
#define f_l2normhelper_sh_rms L2NORMHELPER_SH_RMS #define f_l2normhelper_sh_rms L2NORMHELPER_SH_RMS
#define f_average AVERAGE #define f_average AVERAGE
@@ -71,6 +73,7 @@
#define f_global_interpind2d global_interpind2d_ #define f_global_interpind2d global_interpind2d_
#define f_global_interpind1d global_interpind1d_ #define f_global_interpind1d global_interpind1d_
#define f_l2normhelper l2normhelper_ #define f_l2normhelper l2normhelper_
#define f_l2normhelper7 l2normhelper7_
#define f_l2normhelper_sh l2normhelper_sh_ #define f_l2normhelper_sh l2normhelper_sh_
#define f_l2normhelper_sh_rms l2normhelper_sh_rms_ #define f_l2normhelper_sh_rms l2normhelper_sh_rms_
#define f_average average_ #define f_average average_
@@ -164,6 +167,15 @@ extern "C"
double *, double &, int &); double *, double &, int &);
} }
extern "C"
{
void f_l2normhelper7(int *, double *, double *, double *,
double &, double &, double &,
double &, double &, double &,
double *, double *, double *, double *,
double *, double *, double *, double *, int &);
}
extern "C" extern "C"
{ {
void f_l2normhelper_sh(int *, double *, double *, double *, void f_l2normhelper_sh(int *, double *, double *, double *,

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@@ -2,7 +2,7 @@
#ifndef MICRODEF_H #ifndef MICRODEF_H
#define MICRODEF_H #define MICRODEF_H
#include "microdef.fh" #include "macrodef.fh"
// application parameters // application parameters

View File

@@ -2,6 +2,20 @@
include makefile.inc include makefile.inc
## polint(ordn=6) kernel selector:
## 1 (default): barycentric fast path
## 0 : fallback to Neville path
POLINT6_USE_BARY ?= 1
POLINT6_FLAG = -DPOLINT6_USE_BARYCENTRIC=$(POLINT6_USE_BARY)
ARCH_OPT = -march=x86-64-v4
CXXAPPFLAGS = -O3 $(ARCH_OPT) -fp-model fast=2 -fma -ipo \
-Dfortran3 -Dnewc -I${MKLROOT}/include
f90appflags = -O3 $(ARCH_OPT) -fp-model fast=2 -fma -ipo \
-align array64byte -fpp -I${MKLROOT}/include $(POLINT6_FLAG)
TP_OPTFLAGS = -O3 $(ARCH_OPT) -fp-model fast=2 -fma -ipo \
-Dfortran3 -Dnewc -I${MKLROOT}/include
.SUFFIXES: .o .f90 .C .for .cu .SUFFIXES: .o .f90 .C .for .cu
.f90.o: .f90.o:
@@ -16,6 +30,12 @@ include makefile.inc
.cu.o: .cu.o:
$(Cu) $(CUDA_APP_FLAGS) -c $< -o $@ $(CUDA_LIB_PATH) $(Cu) $(CUDA_APP_FLAGS) -c $< -o $@ $(CUDA_LIB_PATH)
TwoPunctures.o: TwoPunctures.C
${CXX} $(TP_OPTFLAGS) -qopenmp -c $< -o $@
TwoPunctureABE.o: TwoPunctureABE.C
${CXX} $(TP_OPTFLAGS) -qopenmp -c $< -o $@
# Input files # Input files
C++FILES = ABE.o Ansorg.o Block.o misc.o monitor.o Parallel.o MPatch.o var.o\ C++FILES = ABE.o Ansorg.o Block.o misc.o monitor.o Parallel.o MPatch.o var.o\
cgh.o bssn_class.o surface_integral.o ShellPatch.o\ cgh.o bssn_class.o surface_integral.o ShellPatch.o\
@@ -96,7 +116,7 @@ ABEGPU: $(C++FILES_GPU) $(F90FILES) $(F77FILES) $(AHFDOBJS) $(CUDAFILES)
$(CLINKER) $(CXXAPPFLAGS) -o $@ $(C++FILES_GPU) $(F90FILES) $(F77FILES) $(AHFDOBJS) $(CUDAFILES) $(LDLIBS) $(CLINKER) $(CXXAPPFLAGS) -o $@ $(C++FILES_GPU) $(F90FILES) $(F77FILES) $(AHFDOBJS) $(CUDAFILES) $(LDLIBS)
TwoPunctureABE: $(TwoPunctureFILES) TwoPunctureABE: $(TwoPunctureFILES)
$(CLINKER) $(CXXAPPFLAGS) -o $@ $(TwoPunctureFILES) $(LDLIBS) $(CLINKER) $(TP_OPTFLAGS) -qopenmp -o $@ $(TwoPunctureFILES) $(LDLIBS)
clean: clean:
rm *.o ABE ABEGPU TwoPunctureABE make.log -f rm *.o ABE ABEGPU TwoPunctureABE make.log -f

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@@ -1,19 +1,32 @@
## GCC version (commented out)
## filein = -I/usr/include -I/usr/lib/x86_64-linux-gnu/mpich/include -I/usr/lib/x86_64-linux-gnu/openmpi/lib/ -I/usr/lib/gcc/x86_64-linux-gnu/11/ -I/usr/include/c++/11/ ## filein = -I/usr/include -I/usr/lib/x86_64-linux-gnu/mpich/include -I/usr/lib/x86_64-linux-gnu/openmpi/lib/ -I/usr/lib/gcc/x86_64-linux-gnu/11/ -I/usr/include/c++/11/
## filein = -I/usr/include/ -I/usr/include/openmpi-x86_64/ -I/usr/lib/x86_64-linux-gnu/openmpi/include/ -I/usr/lib/x86_64-linux-gnu/openmpi/lib/ -I/usr/lib/gcc/x86_64-linux-gnu/11/ -I/usr/include/c++/11/
## LDLIBS = -L/usr/lib/x86_64-linux-gnu -L/usr/lib64 -L/usr/lib/gcc/x86_64-linux-gnu/11 -lgfortran -lmpi -lgfortran
filein = -I/usr/include/ -I/usr/include/openmpi-x86_64/ -I/usr/lib/x86_64-linux-gnu/openmpi/include/ -I/usr/lib/x86_64-linux-gnu/openmpi/lib/ -I/usr/lib/gcc/x86_64-linux-gnu/11/ -I/usr/include/c++/11/ ## Intel oneAPI version with oneMKL
filein = -I/usr/include/ -I${MKLROOT}/include
## LDLIBS = -L/usr/lib/x86_64-linux-gnu -lmpich -L/usr/lib64 -L/usr/lib/gcc/x86_64-linux-gnu/11 -lgfortran ## Use sequential oneMKL to avoid introducing extra OpenMP behavior into ABE.
LDLIBS = -L/usr/lib/x86_64-linux-gnu -L/usr/lib64 -L/usr/lib/gcc/x86_64-linux-gnu/11 -lgfortran -lmpi -lgfortran LDLIBS = -L${MKLROOT}/lib -lmkl_intel_lp64 -lmkl_sequential -lmkl_core -lifcore -limf -lpthread -lm -ldl -liomp5
CXXAPPFLAGS = -O0 -Wno-deprecated -Dfortran3 -Dnewc ## Optional Intel oneTBB allocator, kept aligned with main's build environment.
#f90appflags = -O0 -fpp USE_TBBMALLOC ?= 1
f90appflags = -O0 -x f95-cpp-input TBBMALLOC_SO ?= /home/intel/oneapi/2025.3/lib/libtbbmalloc.so
f90 = gfortran ifneq ($(wildcard $(TBBMALLOC_SO)),)
f77 = gfortran TBBMALLOC_LIBS = -Wl,--no-as-needed $(TBBMALLOC_SO) -Wl,--as-needed
CXX = g++ else
CC = gcc TBBMALLOC_LIBS = -Wl,--no-as-needed -ltbbmalloc -Wl,--as-needed
CLINKER = mpic++ endif
ifeq ($(USE_TBBMALLOC),1)
LDLIBS := $(TBBMALLOC_LIBS) $(LDLIBS)
endif
f90 = ifx
f77 = ifx
CXX = icpx
CC = icx
CLINKER = mpiicpx
Cu = nvcc Cu = nvcc
CUDA_LIB_PATH = -L/usr/lib/cuda/lib64 -I/usr/include -I/usr/lib/cuda/include CUDA_LIB_PATH = -L/usr/lib/cuda/lib64 -I/usr/include -I/usr/lib/cuda/include

12
parallel_plot_helper.py Normal file
View File

@@ -0,0 +1,12 @@
import multiprocessing
def run_plot_task(task):
func, args = task
return func(*args)
def run_plot_tasks_parallel(plot_tasks):
ctx = multiprocessing.get_context('fork')
with ctx.Pool() as pool:
pool.map(run_plot_task, plot_tasks)

View File

@@ -11,6 +11,8 @@
import numpy ## numpy for array operations import numpy ## numpy for array operations
import scipy ## scipy for interpolation and signal processing import scipy ## scipy for interpolation and signal processing
import math import math
import matplotlib
matplotlib.use('Agg') ## use non-interactive backend for multiprocessing safety
import matplotlib.pyplot as plt ## matplotlib for plotting import matplotlib.pyplot as plt ## matplotlib for plotting
import os ## os for system/file operations import os ## os for system/file operations

View File

@@ -8,16 +8,21 @@
## ##
################################################# #################################################
## Restrict OpenMP to one thread per process so that parallel
## subprocess plotting does not multiply BLAS thread counts.
import os
os.environ.setdefault("OMP_NUM_THREADS", "1")
import numpy import numpy
import scipy import scipy
import matplotlib
matplotlib.use('Agg') ## use non-interactive backend for multiprocessing safety
import matplotlib.pyplot as plt import matplotlib.pyplot as plt
from matplotlib.colors import LogNorm from matplotlib.colors import LogNorm
from mpl_toolkits.mplot3d import Axes3D from mpl_toolkits.mplot3d import Axes3D
## import torch ## import torch
import AMSS_NCKU_Input as input_data import AMSS_NCKU_Input as input_data
import os
######################################################################################### #########################################################################################
@@ -192,3 +197,11 @@ def get_data_xy( Rmin, Rmax, n, data0, time, figure_title, figure_outdir ):
#################################################################################### ####################################################################################
## Allow standalone subprocess execution for parallel binary-data plotting.
if __name__ == '__main__':
import sys
if len(sys.argv) != 4:
print(f"Usage: {sys.argv[0]} <filename> <binary_outdir> <figure_outdir>")
sys.exit(1)
plot_binary_data(sys.argv[1], sys.argv[2], sys.argv[3])

View File

@@ -8,6 +8,8 @@
################################################# #################################################
import numpy ## numpy for array operations import numpy ## numpy for array operations
import matplotlib
matplotlib.use('Agg') ## use non-interactive backend for multiprocessing safety
import matplotlib.pyplot as plt ## matplotlib for plotting import matplotlib.pyplot as plt ## matplotlib for plotting
from mpl_toolkits.mplot3d import Axes3D ## needed for 3D plots from mpl_toolkits.mplot3d import Axes3D ## needed for 3D plots
import glob import glob
@@ -15,6 +17,9 @@ import os ## operating system utilities
import plot_binary_data import plot_binary_data
import AMSS_NCKU_Input as input_data import AMSS_NCKU_Input as input_data
import subprocess
import sys
import multiprocessing
# plt.rcParams['text.usetex'] = True ## enable LaTeX fonts in plots # plt.rcParams['text.usetex'] = True ## enable LaTeX fonts in plots
@@ -50,10 +55,34 @@ def generate_binary_data_plot( binary_outdir, figure_outdir ):
file_list.append(x) file_list.append(x)
print(x) print(x)
## Plot each file in the list ## Plot each file in parallel using subprocesses.
## Each subprocess starts with BLAS thread limits in plot_binary_data.py.
script = os.path.join( os.path.dirname(__file__), "plot_binary_data.py" )
max_workers = min( multiprocessing.cpu_count(), len(file_list) ) if file_list else 0
running = []
failed = []
for filename in file_list: for filename in file_list:
print(filename) print(filename)
plot_binary_data.plot_binary_data(filename, binary_outdir, figure_outdir) proc = subprocess.Popen(
[sys.executable, script, filename, binary_outdir, figure_outdir],
)
running.append( (proc, filename) )
if len(running) >= max_workers:
p, fn = running.pop(0)
p.wait()
if p.returncode != 0:
failed.append(fn)
for p, fn in running:
p.wait()
if p.returncode != 0:
failed.append(fn)
if failed:
print( " WARNING: the following binary data plots failed:" )
for fn in failed:
print( " ", fn )
print( ) print( )
print( " Binary Data Plot Has been Finished " ) print( " Binary Data Plot Has been Finished " )