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24 changed files with 2698 additions and 1316 deletions

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@@ -16,10 +16,7 @@ import numpy
File_directory = "GW150914" ## output file directory
Output_directory = "binary_output" ## binary data file directory
## The file directory name should not be too long
MPI_processes = 64 ## number of mpi processes used in the simulation
OMP_Threads = 3 ## number of OpenMP threads used by each MPI process
MPI_hosts = ["localhost", "192.168.20.102"] ## MPI hosts for multi-node runs
MPI_processes_per_node = 32 ## MPI ranks launched on each node in MPI_hosts
MPI_processes = 64 ## number of mpi processes used in the simulation
GPU_Calculation = "no" ## Use GPU or not
## (prefer "no" in the current version, because the GPU part may have bugs when integrated in this Python interface)

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@@ -5284,6 +5284,41 @@ double Parallel::L2Norm(Patch *Pat, var *vf)
return tvf;
}
void Parallel::L2Norm7(Patch *Pat, var **vf, double *norms)
{
int myrank;
MPI_Comm_rank(MPI_COMM_WORLD, &myrank);
double tvf[7], dtvf[7];
int BDW = ghost_width;
for (int i = 0; i < 7; i++)
dtvf[i] = 0;
MyList<Block> *BP = Pat->blb;
while (BP)
{
Block *cg = BP->data;
if (myrank == cg->rank)
{
f_l2normhelper7(cg->shape, cg->X[0], cg->X[1], cg->X[2],
Pat->bbox[0], Pat->bbox[1], Pat->bbox[2],
Pat->bbox[3], Pat->bbox[4], Pat->bbox[5],
cg->fgfs[vf[0]->sgfn], cg->fgfs[vf[1]->sgfn], cg->fgfs[vf[2]->sgfn],
cg->fgfs[vf[3]->sgfn], cg->fgfs[vf[4]->sgfn], cg->fgfs[vf[5]->sgfn],
cg->fgfs[vf[6]->sgfn], tvf, BDW);
for (int i = 0; i < 7; i++)
dtvf[i] += tvf[i];
}
if (BP == Pat->ble)
break;
BP = BP->next;
}
MPI_Allreduce(dtvf, tvf, 7, MPI_DOUBLE, MPI_SUM, MPI_COMM_WORLD);
for (int i = 0; i < 7; i++)
norms[i] = sqrt(tvf[i]);
}
double Parallel::L2Norm(Patch *Pat, var *vf, MPI_Comm Comm_here)
{
int myrank;
@@ -5315,6 +5350,41 @@ double Parallel::L2Norm(Patch *Pat, var *vf, MPI_Comm Comm_here)
return tvf;
}
void Parallel::L2Norm7(Patch *Pat, var **vf, double *norms, MPI_Comm Comm_here)
{
int myrank;
MPI_Comm_rank(MPI_COMM_WORLD, &myrank);
double tvf[7], dtvf[7];
int BDW = ghost_width;
for (int i = 0; i < 7; i++)
dtvf[i] = 0;
MyList<Block> *BP = Pat->blb;
while (BP)
{
Block *cg = BP->data;
if (myrank == cg->rank)
{
f_l2normhelper7(cg->shape, cg->X[0], cg->X[1], cg->X[2],
Pat->bbox[0], Pat->bbox[1], Pat->bbox[2],
Pat->bbox[3], Pat->bbox[4], Pat->bbox[5],
cg->fgfs[vf[0]->sgfn], cg->fgfs[vf[1]->sgfn], cg->fgfs[vf[2]->sgfn],
cg->fgfs[vf[3]->sgfn], cg->fgfs[vf[4]->sgfn], cg->fgfs[vf[5]->sgfn],
cg->fgfs[vf[6]->sgfn], tvf, BDW);
for (int i = 0; i < 7; i++)
dtvf[i] += tvf[i];
}
if (BP == Pat->ble)
break;
BP = BP->next;
}
MPI_Allreduce(dtvf, tvf, 7, MPI_DOUBLE, MPI_SUM, Comm_here);
for (int i = 0; i < 7; i++)
norms[i] = sqrt(tvf[i]);
}
void Parallel::checkgsl(MyList<Parallel::gridseg> *pp, bool first_only)
{
int myrank = 0;

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@@ -183,6 +183,7 @@ namespace Parallel
MyList<Parallel::gridseg> **out_src, MyList<Parallel::gridseg> **out_dst);
void PeriodicBD(Patch *Pat, MyList<var> *VarList, int Symmetry);
double L2Norm(Patch *Pat, var *vf);
void L2Norm7(Patch *Pat, var **vf, double *norms);
void checkgsl(MyList<Parallel::gridseg> *pp, bool first_only);
void checkvarl(MyList<var> *pp, bool first_only);
MyList<Parallel::gridseg> *divide_gsl(MyList<Parallel::gridseg> *p, Patch *Pat);
@@ -218,6 +219,7 @@ namespace Parallel
void checkpatchlist(MyList<Patch> *PatL, bool buflog);
double L2Norm(Patch *Pat, var *vf, MPI_Comm Comm_here);
void L2Norm7(Patch *Pat, var **vf, double *norms, MPI_Comm Comm_here);
bool PatList_Interp_Points(MyList<Patch> *PatL, MyList<var> *VarList,
int NN, double **XX,
double *Shellf, int Symmetry, MPI_Comm Comm_here);

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@@ -3472,6 +3472,43 @@ double ShellPatch::L2Norm(var *vf)
return tvf;
}
void ShellPatch::L2Norm7(var **vf, double *norms)
{
double tvf[7], dtvf[7];
int BDW = overghost;
for (int i = 0; i < 7; i++)
dtvf[i] = 0;
MyList<ss_patch> *sPp = PatL;
while (sPp)
{
MyList<Block> *Bp = sPp->data->blb;
while (Bp)
{
Block *cg = Bp->data;
if (myrank == cg->rank)
{
f_l2normhelper7(cg->shape, cg->X[0], cg->X[1], cg->X[2],
sPp->data->bbox[0], sPp->data->bbox[1], sPp->data->bbox[2],
sPp->data->bbox[3], sPp->data->bbox[4], sPp->data->bbox[5],
cg->fgfs[vf[0]->sgfn], cg->fgfs[vf[1]->sgfn], cg->fgfs[vf[2]->sgfn],
cg->fgfs[vf[3]->sgfn], cg->fgfs[vf[4]->sgfn], cg->fgfs[vf[5]->sgfn],
cg->fgfs[vf[6]->sgfn], tvf, BDW);
for (int i = 0; i < 7; i++)
dtvf[i] += tvf[i];
}
if (Bp == sPp->data->ble)
break;
Bp = Bp->next;
}
sPp = sPp->next;
}
MPI_Allreduce(dtvf, tvf, 7, MPI_DOUBLE, MPI_SUM, MPI_COMM_WORLD);
for (int i = 0; i < 7; i++)
norms[i] = sqrt(tvf[i]);
}
// find maximum of abstract value, XX store position for maximum, Shellf store maximum themselvs
void ShellPatch::Find_Maximum(MyList<var> *VarList, double *XX,

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@@ -198,6 +198,7 @@ public:
void write_Pablo_file_ss(int *ext, double xmin, double xmax, double ymin, double ymax, double zmin, double zmax,
char *filename, int sst);
double L2Norm(var *vf);
void L2Norm7(var **vf, double *norms);
void Find_Maximum(MyList<var> *VarList, double *XX, double *Shellf);
};

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@@ -47,6 +47,233 @@ using namespace std;
#define BSSN_ENABLE_MEM_USAGE_LOG 0
#endif
#ifndef BSSN_FINE_TIMING
#define BSSN_FINE_TIMING 0
#endif
#ifndef BSSN_FINE_TIMING_EVERY
#define BSSN_FINE_TIMING_EVERY 1
#endif
#ifndef BSSN_FINE_TIMING_TOPN
#define BSSN_FINE_TIMING_TOPN 8
#endif
#ifndef BSSN_KERNEL_FINE_TIMING
#define BSSN_KERNEL_FINE_TIMING 0
#endif
#ifndef BSSN_ENABLE_STDIN_ABORT_POLL
#define BSSN_ENABLE_STDIN_ABORT_POLL 0
#endif
#if BSSN_FINE_TIMING
namespace step_timing
{
enum Bucket
{
TB_ANALYSIS_PSI4 = 0,
TB_ANALYSIS_SURFACE,
TB_ANALYSIS_IO,
TB_BH_PREDICTOR,
TB_PREDICTOR_RHS,
TB_PREDICTOR_SYNC,
TB_BH_CORRECTOR,
TB_CORRECTOR_RHS,
TB_CORRECTOR_SYNC,
TB_STATE_SWAP,
TB_RESTRICT_PROLONG,
TB_CONSTRAINT_OUT,
TB_DUMP_3D,
TB_DUMP_2D,
TB_CHECKPOINT,
TB_REGRID,
TB_COUNT
};
static double local_bucket_seconds[TB_COUNT];
static const char *bucket_labels[TB_COUNT] =
{
"analysis_psi4",
"analysis_surface",
"analysis_io",
"bh_predictor",
"predictor_rhs",
"predictor_sync",
"bh_corrector",
"corrector_rhs",
"corrector_sync",
"state_swap",
"restrict_prolong",
"constraint_out",
"dump_3d",
"dump_2d",
"checkpoint",
"regrid"
};
void reset()
{
for (int i = 0; i < TB_COUNT; i++)
local_bucket_seconds[i] = 0.0;
}
void add(Bucket bucket, double seconds)
{
local_bucket_seconds[int(bucket)] += seconds;
}
void report(int myrank, int nprocs, monitor *TimingMonitor,
int step_index, double phys_time, double step_wall_seconds)
{
double max_bucket_seconds[TB_COUNT];
double avg_bucket_seconds[TB_COUNT];
MPI_Reduce(local_bucket_seconds, max_bucket_seconds, TB_COUNT, MPI_DOUBLE, MPI_MAX, 0, MPI_COMM_WORLD);
MPI_Reduce(local_bucket_seconds, avg_bucket_seconds, TB_COUNT, MPI_DOUBLE, MPI_SUM, 0, MPI_COMM_WORLD);
if (myrank != 0)
return;
for (int i = 0; i < TB_COUNT; i++)
avg_bucket_seconds[i] /= Mymax(1, nprocs);
if (TimingMonitor)
{
double row[2 + 2 * TB_COUNT];
row[0] = double(step_index);
row[1] = step_wall_seconds;
for (int i = 0; i < TB_COUNT; i++)
{
row[2 + i] = max_bucket_seconds[i];
row[2 + TB_COUNT + i] = avg_bucket_seconds[i];
}
TimingMonitor->writefile(phys_time, 2 + 2 * TB_COUNT, row);
}
double residual = step_wall_seconds;
for (int i = 0; i < TB_COUNT; i++)
residual -= max_bucket_seconds[i];
if (residual < 0.0)
residual = 0.0;
int order[TB_COUNT];
for (int i = 0; i < TB_COUNT; i++)
order[i] = i;
for (int i = 0; i < TB_COUNT - 1; i++)
for (int j = i + 1; j < TB_COUNT; j++)
if (max_bucket_seconds[order[j]] > max_bucket_seconds[order[i]])
{
int tmp = order[i];
order[i] = order[j];
order[j] = tmp;
}
ios::fmtflags old_flags = cout.flags();
streamsize old_precision = cout.precision();
cout << " Fine timing hot spots (max rank wall estimate):" << endl;
const int topn = Mymin(BSSN_FINE_TIMING_TOPN, TB_COUNT);
for (int i = 0; i < topn; i++)
{
const int ib = order[i];
const double frac = (step_wall_seconds > 0.0) ? (100.0 * max_bucket_seconds[ib] / step_wall_seconds) : 0.0;
cout << " "
<< setw(20) << left << bucket_labels[ib]
<< " = " << setw(10) << right << setprecision(6) << max_bucket_seconds[ib]
<< " s (" << setw(6) << setprecision(4) << frac << "%)" << endl;
}
if (residual > 1.0e-6)
{
const double frac = (step_wall_seconds > 0.0) ? (100.0 * residual / step_wall_seconds) : 0.0;
cout << " "
<< setw(20) << left << "unprofiled_residual"
<< " = " << setw(10) << right << setprecision(6) << residual
<< " s (" << setw(6) << setprecision(4) << frac << "%)" << endl;
}
cout << endl;
cout.flags(old_flags);
cout.precision(old_precision);
}
}
#define STEP_TIMER_DECL(var_name) const double var_name = MPI_Wtime()
#define STEP_TIMER_ADD(bucket_name, var_name) step_timing::add(step_timing::bucket_name, MPI_Wtime() - (var_name))
#else
#define STEP_TIMER_DECL(var_name)
#define STEP_TIMER_ADD(bucket_name, var_name)
#endif
#if BSSN_KERNEL_FINE_TIMING
namespace rhs_kernel_timing_report
{
void report(int myrank, int nprocs, int step_index, double step_wall_seconds)
{
const int bucket_count = f_bssn_rhs_kernel_timing_bucket_count();
const double *local_bucket_seconds = f_bssn_rhs_kernel_timing_local_seconds();
if (bucket_count <= 0 || !local_bucket_seconds)
return;
double *max_bucket_seconds = new double[bucket_count];
double *avg_bucket_seconds = new double[bucket_count];
int *order = new int[bucket_count];
MPI_Reduce((void *)local_bucket_seconds, max_bucket_seconds, bucket_count, MPI_DOUBLE, MPI_MAX, 0, MPI_COMM_WORLD);
MPI_Reduce((void *)local_bucket_seconds, avg_bucket_seconds, bucket_count, MPI_DOUBLE, MPI_SUM, 0, MPI_COMM_WORLD);
if (myrank == 0)
{
double kernel_total = 0.0;
for (int i = 0; i < bucket_count; ++i)
{
avg_bucket_seconds[i] /= Mymax(1, nprocs);
order[i] = i;
kernel_total += max_bucket_seconds[i];
}
for (int i = 0; i < bucket_count - 1; ++i)
for (int j = i + 1; j < bucket_count; ++j)
if (max_bucket_seconds[order[j]] > max_bucket_seconds[order[i]])
{
int tmp = order[i];
order[i] = order[j];
order[j] = tmp;
}
ios::fmtflags old_flags = cout.flags();
streamsize old_precision = cout.precision();
const double kernel_frac = (step_wall_seconds > 0.0) ? (100.0 * kernel_total / step_wall_seconds) : 0.0;
cout << " RHS kernel split (max-rank accumulated over step " << step_index << "): total "
<< setprecision(6) << kernel_total << " s (" << setprecision(4)
<< kernel_frac << "% of coarse step)" << endl;
const int topn = Mymin(BSSN_FINE_TIMING_TOPN, bucket_count);
for (int i = 0; i < topn; ++i)
{
const int ib = order[i];
const double frac = (kernel_total > 0.0) ? (100.0 * max_bucket_seconds[ib] / kernel_total) : 0.0;
cout << " "
<< setw(20) << left << f_bssn_rhs_kernel_timing_label(ib)
<< " = " << setw(10) << right << setprecision(6) << max_bucket_seconds[ib]
<< " s (" << setw(6) << setprecision(4) << frac << "% of kernel)" << endl;
}
cout << endl;
cout.flags(old_flags);
cout.precision(old_precision);
}
delete[] max_bucket_seconds;
delete[] avg_bucket_seconds;
delete[] order;
}
}
#endif
//================================================================================================
// define bssn_class
@@ -65,6 +292,7 @@ bssn_class::bssn_class(double Couranti, double StartTimei, double TotalTimei,
xc(0), yc(0), zc(0), xr(0), yr(0), zr(0), trigger(0), dTT(0), dumpid(0),
#endif
a_lev(a_levi), maxl(maxli), decn(decni), maxrex(maxrexi), drex(drexi),
ConstraintRefreshLevels(0),
CheckPoint(0)
// CheckPoint(0)
{
@@ -107,6 +335,24 @@ bssn_class::bssn_class(double Couranti, double StartTimei, double TotalTimei,
a_stream.str("");
a_stream << setw(15) << "# time Ham Px Py Pz Gx Gy Gz";
ConVMonitor = new monitor("bssn_constraint.dat", myrank, a_stream.str());
#if BSSN_FINE_TIMING
a_stream.clear();
a_stream.str("");
a_stream << setw(8) << "# step";
a_stream << setw(14) << "wall";
for (int ib = 0; ib < step_timing::TB_COUNT; ib++)
a_stream << setw(18) << step_timing::bucket_labels[ib];
for (int ib = 0; ib < step_timing::TB_COUNT; ib++)
{
char str_avg[64];
sprintf(str_avg, "avg_%s", step_timing::bucket_labels[ib]);
a_stream << setw(18) << str_avg;
}
TimingMonitor = new monitor("bssn_step_timing.dat", myrank, a_stream.str());
#else
TimingMonitor = 0;
#endif
}
// setup sphere integration engine
Waveshell = new surface_integral(Symmetry);
@@ -702,6 +948,9 @@ void bssn_class::Initialize()
}
}
GH = new cgh(0, ngfs, Symmetry, pname, checkrun, ErrorMonitor);
ConstraintRefreshLevels = new int[GH->levels];
for (int il = 0; il < GH->levels; il++)
ConstraintRefreshLevels[il] = 0;
if (checkrun)
CheckPoint->readcheck_cgh(PhysTime, GH, myrank, nprocs, Symmetry);
else
@@ -791,6 +1040,8 @@ bssn_class::~bssn_class()
DumpList->clearList();
ConstraintList->clearList();
delete[] ConstraintRefreshLevels;
delete phio;
delete trKo;
delete gxxo;
@@ -1050,6 +1301,7 @@ bssn_class::~bssn_class()
delete BHMonitor;
delete MAPMonitor;
delete ConVMonitor;
delete TimingMonitor;
delete Waveshell;
delete CheckPoint;
@@ -2036,7 +2288,7 @@ void bssn_class::Read_Ansorg()
void bssn_class::Evolve(int Steps)
{
double prev_clock = 0.0, curr_clock = 0.0;
clock_t prev_clock, curr_clock;
double LastDump = 0.0, LastCheck = 0.0, Last2dDump = 0.0;
LastAnas = 0;
#if 0
@@ -2147,12 +2399,21 @@ void bssn_class::Evolve(int Steps)
for (int ncount = 1; ncount < Steps + 1; ncount++)
{
#if BSSN_FINE_TIMING
step_timing::reset();
#endif
#if BSSN_KERNEL_FINE_TIMING
f_bssn_rhs_kernel_timing_reset();
#endif
#if (BSSN_FINE_TIMING || BSSN_KERNEL_FINE_TIMING)
const double step_wall_start = MPI_Wtime();
#endif
// special for large mass ratio consideration
// if(fabs(Porg0[0][0]-Porg0[1][0])+fabs(Porg0[0][1]-Porg0[1][1])+fabs(Porg0[0][2]-Porg0[1][2])<1e-6)
// { GH->levels=GH->movls; }
if (myrank == 0)
curr_clock = MPI_Wtime();
curr_clock = clock();
#if (PSTR == 0)
RecursiveStep(0);
#elif (PSTR == 1 || PSTR == 2 || PSTR == 3)
@@ -2173,6 +2434,7 @@ void bssn_class::Evolve(int Steps)
// When LastDump >= DumpTime, output corresponding binary data
if (LastDump >= DumpTime)
{
STEP_TIMER_DECL(timer_dump3d);
// misc::tillherecheck("before Dump_Data");
for (int lev = 0; lev < GH->levels; lev++)
@@ -2180,6 +2442,7 @@ void bssn_class::Evolve(int Steps)
#ifdef WithShell
SH->Dump_Data(DumpList, 0, PhysTime, dT_mon);
#endif
STEP_TIMER_ADD(TB_DUMP_3D, timer_dump3d);
LastDump = 0;
@@ -2192,10 +2455,12 @@ void bssn_class::Evolve(int Steps)
// When Last2dDump >= d2DumpTime, output corresponding 2D data
if (Last2dDump >= d2DumpTime)
{
STEP_TIMER_DECL(timer_dump2d);
// misc::tillherecheck("before 2dDump_Data");
for (int lev = 0; lev < GH->levels; lev++)
Parallel::d2Dump_Data(GH->PatL[lev], DumpList, 0, PhysTime, dT_mon);
STEP_TIMER_ADD(TB_DUMP_2D, timer_dump2d);
Last2dDump = 0;
@@ -2208,10 +2473,10 @@ void bssn_class::Evolve(int Steps)
if (myrank == 0)
{
prev_clock = curr_clock;
curr_clock = MPI_Wtime();
curr_clock = clock();
cout << endl;
cout << " Timestep # " << ncount << ": integrating to time: " << PhysTime << " "
<< " Computer used " << (curr_clock - prev_clock)
<< " Computer used " << (double)(curr_clock - prev_clock) / ((double)CLOCKS_PER_SEC)
<< " seconds! " << endl;
// cout << endl;
}
@@ -2220,10 +2485,12 @@ void bssn_class::Evolve(int Steps)
break;
#if (REGLEV == 1)
STEP_TIMER_DECL(timer_regrid);
GH->Regrid(Symmetry, BH_num, Porgbr, Porg0,
SynchList_cor, OldStateList, StateList, SynchList_pre,
fgt(PhysTime - dT_mon, StartTime, dT_mon / 2), ErrorMonitor);
for (int il = 0; il < GH->levels; il++) { sync_cache_pre[il].invalidate(); sync_cache_cor[il].invalidate(); sync_cache_rp_coarse[il].invalidate(); sync_cache_rp_fine[il].invalidate(); sync_cache_restrict[il].invalidate(); sync_cache_outbd[il].invalidate(); }
STEP_TIMER_ADD(TB_REGRID, timer_regrid);
#endif
#if (REGLEV == 0 && (PSTR == 1 || PSTR == 2))
@@ -2263,10 +2530,13 @@ void bssn_class::Evolve(int Steps)
<< endl;
}
cout << endl;
#if BSSN_ENABLE_STDIN_ABORT_POLL
cout << " If you think the physical evolution time is enough for this simulation, please input 'stop' in the terminal to stop the MPI processes in the next evolution step ! " << endl;
#endif
// cout << endl;
}
#if BSSN_ENABLE_STDIN_ABORT_POLL
////////////////////////////////////////////////////////////
// If an "abort" command is detected on stdin, terminate MPI processes
////////////////////////////////////////////////////////////
@@ -2294,10 +2564,12 @@ void bssn_class::Evolve(int Steps)
}
////////////////////////////////////////////////////////////
#endif
// When LastCheck >= CheckTime, perform runtime checks and output status data
if (LastCheck >= CheckTime)
{
STEP_TIMER_DECL(timer_checkpoint);
LastCheck = 0;
CheckPoint->write_Black_Hole_position(BH_num_input, BH_num, Porg0, Porgbr, Mass);
@@ -2306,7 +2578,20 @@ void bssn_class::Evolve(int Steps)
CheckPoint->writecheck_sh(PhysTime, SH);
#endif
CheckPoint->write_bssn(LastDump, Last2dDump, LastAnas);
STEP_TIMER_ADD(TB_CHECKPOINT, timer_checkpoint);
}
#if (BSSN_FINE_TIMING || BSSN_KERNEL_FINE_TIMING)
const double step_wall_seconds = MPI_Wtime() - step_wall_start;
#endif
#if BSSN_FINE_TIMING
if (ncount % BSSN_FINE_TIMING_EVERY == 0)
step_timing::report(myrank, nprocs, TimingMonitor, ncount, PhysTime, step_wall_seconds);
#endif
#if BSSN_KERNEL_FINE_TIMING
if (ncount % BSSN_FINE_TIMING_EVERY == 0)
rhs_kernel_timing_report::report(myrank, nprocs, ncount, step_wall_seconds);
#endif
}
/*
#ifdef With_AHF
@@ -2438,10 +2723,16 @@ void bssn_class::RecursiveStep(int lev)
#endif
#if (REGLEV == 0)
STEP_TIMER_DECL(timer_regrid_onelevel);
if (GH->Regrid_Onelevel(lev, Symmetry, BH_num, Porgbr, Porg0,
SynchList_cor, OldStateList, StateList, SynchList_pre,
fgt(PhysTime - dT_lev, StartTime, dT_lev / 2), ErrorMonitor))
{
if (ConstraintRefreshLevels)
ConstraintRefreshLevels[lev] = 1;
for (int il = 0; il < GH->levels; il++) { sync_cache_pre[il].invalidate(); sync_cache_cor[il].invalidate(); sync_cache_rp_coarse[il].invalidate(); sync_cache_rp_fine[il].invalidate(); sync_cache_restrict[il].invalidate(); sync_cache_outbd[il].invalidate(); }
}
STEP_TIMER_ADD(TB_REGRID, timer_regrid_onelevel);
#endif
}
@@ -3034,6 +3325,7 @@ void bssn_class::Step(int lev, int YN)
// new code 2013-2-15, zjcao
#if (MAPBH == 1)
STEP_TIMER_DECL(timer_bh_predictor);
// for black hole position
if (BH_num > 0 && lev == GH->levels - 1)
{
@@ -3064,6 +3356,7 @@ void bssn_class::Step(int lev, int YN)
}
}
}
STEP_TIMER_ADD(TB_BH_PREDICTOR, timer_bh_predictor);
// data analysis part
// Warning NOTE: the variables1 are used as temp storege room
@@ -3086,6 +3379,7 @@ void bssn_class::Step(int lev, int YN)
int ERROR = 0;
MyList<ss_patch> *sPp;
STEP_TIMER_DECL(timer_predictor_rhs);
// Predictor
MyList<Patch> *Pp = GH->PatL[lev];
while (Pp)
@@ -3361,6 +3655,9 @@ void bssn_class::Step(int lev, int YN)
}
#endif
STEP_TIMER_ADD(TB_PREDICTOR_RHS, timer_predictor_rhs);
STEP_TIMER_DECL(timer_predictor_sync);
Parallel::AsyncSyncState async_pre;
Parallel::Sync_start(GH->PatL[lev], SynchList_pre, Symmetry, sync_cache_pre[lev], async_pre);
@@ -3398,6 +3695,7 @@ void bssn_class::Step(int lev, int YN)
}
}
#endif
STEP_TIMER_ADD(TB_PREDICTOR_SYNC, timer_predictor_sync);
#if (MAPBH == 0)
// for black hole position
@@ -3442,6 +3740,7 @@ void bssn_class::Step(int lev, int YN)
// corrector
for (iter_count = 1; iter_count < 4; iter_count++)
{
STEP_TIMER_DECL(timer_corrector_rhs);
// for RK4: t0, t0+dt/2, t0+dt/2, t0+dt;
if (iter_count == 1 || iter_count == 3)
TRK4 += dT_lev / 2;
@@ -3721,6 +4020,9 @@ void bssn_class::Step(int lev, int YN)
}
#endif
STEP_TIMER_ADD(TB_CORRECTOR_RHS, timer_corrector_rhs);
STEP_TIMER_DECL(timer_corrector_sync);
Parallel::AsyncSyncState async_cor;
Parallel::Sync_start(GH->PatL[lev], SynchList_cor, Symmetry, sync_cache_cor[lev], async_cor);
@@ -3760,8 +4062,10 @@ void bssn_class::Step(int lev, int YN)
}
}
#endif
STEP_TIMER_ADD(TB_CORRECTOR_SYNC, timer_corrector_sync);
#if (MAPBH == 0)
STEP_TIMER_DECL(timer_bh_corrector);
// for black hole position
if (BH_num > 0 && lev == GH->levels - 1)
{
@@ -3794,11 +4098,13 @@ void bssn_class::Step(int lev, int YN)
}
}
}
STEP_TIMER_ADD(TB_BH_CORRECTOR, timer_bh_corrector);
#endif
// swap time level
if (iter_count < 3)
{
STEP_TIMER_DECL(timer_state_swap);
Pp = GH->PatL[lev];
while (Pp)
{
@@ -3845,9 +4151,11 @@ void bssn_class::Step(int lev, int YN)
}
}
#endif
STEP_TIMER_ADD(TB_STATE_SWAP, timer_state_swap);
}
}
#if (RPS == 0)
STEP_TIMER_DECL(timer_restrict_prolong);
// mesh refinement boundary part
RestrictProlong(lev, YN, BB);
@@ -3868,6 +4176,7 @@ void bssn_class::Step(int lev, int YN)
}
#endif
STEP_TIMER_ADD(TB_RESTRICT_PROLONG, timer_restrict_prolong);
#endif
// note the data structure before update
// SynchList_cor 1 -----------
@@ -3876,6 +4185,7 @@ void bssn_class::Step(int lev, int YN)
//
// OldStateList old -----------
// update
STEP_TIMER_DECL(timer_state_commit);
Pp = GH->PatL[lev];
while (Pp)
{
@@ -3932,6 +4242,7 @@ void bssn_class::Step(int lev, int YN)
Porg0[ithBH][2] = Porg1[ithBH][2];
}
}
STEP_TIMER_ADD(TB_STATE_SWAP, timer_state_commit);
}
//================================================================================================
@@ -4258,7 +4569,9 @@ void bssn_class::Step(int lev, int YN)
}
}
#endif
STEP_TIMER_ADD(TB_PREDICTOR_SYNC, timer_predictor_sync);
STEP_TIMER_DECL(timer_bh_predictor);
// for black hole position
if (BH_num > 0 && lev == GH->levels - 1)
{
@@ -4297,6 +4610,7 @@ void bssn_class::Step(int lev, int YN)
{
AnalysisStuff(lev, dT_lev);
}
STEP_TIMER_ADD(TB_BH_PREDICTOR, timer_bh_predictor);
// corrector
for (iter_count = 1; iter_count < 3; iter_count++)
{
@@ -5767,6 +6081,7 @@ void bssn_class::RestrictProlong(int lev, int YN, bool BB,
//
// SynchList_cor old -----------
{
STEP_TIMER_DECL(timer_restrict_prolong);
#if (PSTR == 1 || PSTR == 2)
// stringstream a_stream;
// a_stream.setf(ios::left);
@@ -5909,6 +6224,7 @@ void bssn_class::RestrictProlong(int lev, int YN, bool BB,
// misc::tillherecheck(GH->Commlev[GH->mylev],GH->start_rank[GH->mylev],a_stream.str());
#endif
}
STEP_TIMER_ADD(TB_RESTRICT_PROLONG, timer_restrict_prolong);
}
//================================================================================================
@@ -5928,6 +6244,7 @@ void bssn_class::RestrictProlong_aux(int lev, int YN, bool BB,
//
// SynchList_cor old -----------
{
STEP_TIMER_DECL(timer_restrict_prolong);
// misc::tillherecheck(GH->Commlev[lev],GH->start_rank[lev],"starting RestrictProlong_aux");
if (lev >= GH->levels - 1)
@@ -5996,6 +6313,7 @@ void bssn_class::RestrictProlong_aux(int lev, int YN, bool BB,
Parallel::Sync_cached(GH->PatL[lev], SL, Symmetry, sync_cache_rp_fine[lev]);
}
STEP_TIMER_ADD(TB_RESTRICT_PROLONG, timer_restrict_prolong);
}
//================================================================================================
@@ -6006,6 +6324,7 @@ void bssn_class::RestrictProlong_aux(int lev, int YN, bool BB,
void bssn_class::RestrictProlong(int lev, int YN, bool BB)
{
STEP_TIMER_DECL(timer_restrict_prolong);
double dT_lev = dT * pow(0.5, Mymax(lev, trfls));
// we assume for fine
// SynchList_cor 1 -----------
@@ -6085,6 +6404,7 @@ void bssn_class::RestrictProlong(int lev, int YN, bool BB)
Parallel::Sync_cached(GH->PatL[lev], SynchList_cor, Symmetry, sync_cache_rp_fine[lev]);
}
STEP_TIMER_ADD(TB_RESTRICT_PROLONG, timer_restrict_prolong);
}
//================================================================================================
@@ -6835,18 +7155,15 @@ void bssn_class::compute_Porg_rhs(double **BH_PS,double **BH_RHS,var *forx,var *
void bssn_class::compute_Porg_rhs(double **BH_PS, double **BH_RHS, var *forx, var *fory, var *forz, int ilev)
{
const int InList = 3;
MyList<var> DG_List_x(forx);
MyList<var> DG_List_y(fory);
MyList<var> DG_List_z(forz);
DG_List_x.next = &DG_List_y;
DG_List_y.next = &DG_List_z;
MyList<var> *DG_List = new MyList<var>(forx);
DG_List->insert(fory);
DG_List->insert(forz);
double *x1, *y1, *z1;
double *shellf;
shellf = new double[3];
double *pox[3];
for (int i = 0; i < 3; i++)
pox[i] = new double[1];
double shellf[3];
double pox_buf[3][1];
double *pox[3] = {pox_buf[0], pox_buf[1], pox_buf[2]};
for (int n = 0; n < BH_num; n++)
{
@@ -6857,9 +7174,9 @@ void bssn_class::compute_Porg_rhs(double **BH_PS, double **BH_RHS, var *forx, va
int lev = ilev;
#if (PSTR == 0)
while (!Parallel::PatList_Interp_Points(GH->PatL[lev], DG_List, 1, pox, shellf, Symmetry))
while (!Parallel::PatList_Interp_Points(GH->PatL[lev], &DG_List_x, 1, pox, shellf, Symmetry))
#elif (PSTR == 1 || PSTR == 2 || PSTR == 3)
while (!Parallel::PatList_Interp_Points(GH->PatL[lev], DG_List, 1, pox, shellf, Symmetry, GH->Commlev[lev]))
while (!Parallel::PatList_Interp_Points(GH->PatL[lev], &DG_List_x, 1, pox, shellf, Symmetry, GH->Commlev[lev]))
#endif
{
lev--;
@@ -6868,7 +7185,7 @@ void bssn_class::compute_Porg_rhs(double **BH_PS, double **BH_RHS, var *forx, va
ErrorMonitor->outfile << "fail to find black holes at t = " << PhysTime << endl;
for (n = 0; n < BH_num; n++)
ErrorMonitor->outfile << "(x,y,z) = ("
<< pox[0][n] << "," << pox[1][n] << "," << pox[2][n]
<< BH_PS[n][0] << "," << BH_PS[n][1] << "," << BH_PS[n][2]
<< ")" << endl;
break;
}
@@ -6881,11 +7198,6 @@ void bssn_class::compute_Porg_rhs(double **BH_PS, double **BH_RHS, var *forx, va
BH_RHS[n][2] = -shellf[2];
}
}
DG_List->clearList();
delete[] shellf;
for (int i = 0; i < 3; i++)
delete[] pox[i];
}
#endif
@@ -7108,6 +7420,10 @@ void bssn_class::AnalysisStuff(int lev, double dT_lev)
IP = new double[NN];
RoutMAP = new double[7];
double Rex = maxrex;
bool patch_mass_prepared = false;
#ifdef WithShell
bool shell_mass_prepared = false;
#endif
for (int i = 0; i < decn; i++)
{
#ifdef Point_Psi4
@@ -7135,7 +7451,8 @@ void bssn_class::AnalysisStuff(int lev, double dT_lev)
gxx0, gxy0, gxz0, gyy0, gyz0, gzz0,
Axx0, Axy0, Axz0, Ayy0, Ayz0, Azz0,
Gmx0, Gmy0, Gmz0, Sfx1, Sfy1, Sfz1, // here we can not touch rhs variables, but 1 variables
RoutMAP, ErrorMonitor);
RoutMAP, ErrorMonitor, !patch_mass_prepared);
patch_mass_prepared = true;
}
else
{
@@ -7143,44 +7460,52 @@ void bssn_class::AnalysisStuff(int lev, double dT_lev)
gxx0, gxy0, gxz0, gyy0, gyz0, gzz0,
Axx0, Axy0, Axz0, Ayy0, Ayz0, Azz0,
Gmx0, Gmy0, Gmz0, Sfx1, Sfy1, Sfz1, // here we can not touch rhs variables, but 1 variables
RoutMAP, ErrorMonitor);
RoutMAP, ErrorMonitor, !shell_mass_prepared);
shell_mass_prepared = true;
}
#else
Waveshell->surf_MassPAng(Rex, lev, GH, phi0, trK0,
gxx0, gxy0, gxz0, gyy0, gyz0, gzz0,
Axx0, Axy0, Axz0, Ayy0, Ayz0, Azz0,
Gmx0, Gmy0, Gmz0, Sfx1, Sfy1, Sfz1, // here we can not touch rhs variables, but 1 variables
RoutMAP, ErrorMonitor);
RoutMAP, ErrorMonitor, !patch_mass_prepared);
patch_mass_prepared = true;
#endif
#else
// misc::tillherecheck(GH->Commlev[lev],GH->start_rank[lev],"before surface integral");
#ifdef WithShell
if (lev > 0 || Rex < GH->bbox[0][0][3])
{
Waveshell->surf_Wave(Rex, lev, GH, Rpsi4, Ipsi4, 2, maxl, NN, RP, IP, ErrorMonitor);
Waveshell->surf_MassPAng(Rex, lev, GH, phi0, trK0,
gxx0, gxy0, gxz0, gyy0, gyz0, gzz0,
Axx0, Axy0, Axz0, Ayy0, Ayz0, Azz0,
Gmx0, Gmy0, Gmz0, Sfx1, Sfy1, Sfz1, // here we can not touch rhs variables, but 1 variables
RoutMAP, ErrorMonitor);
Waveshell->surf_WaveMassPAng(Rex, lev, GH,
Rpsi4, Ipsi4, 2, maxl, NN, RP, IP,
phi0, trK0,
gxx0, gxy0, gxz0, gyy0, gyz0, gzz0,
Axx0, Axy0, Axz0, Ayy0, Ayz0, Azz0,
Gmx0, Gmy0, Gmz0, Sfx1, Sfy1, Sfz1,
RoutMAP, ErrorMonitor, !patch_mass_prepared);
patch_mass_prepared = true;
}
else
{
Waveshell->surf_Wave(Rex, lev, SH, Rpsi4, Ipsi4, 2, maxl, NN, RP, IP, ErrorMonitor);
Waveshell->surf_MassPAng(Rex, lev, SH, phi0, trK0,
gxx0, gxy0, gxz0, gyy0, gyz0, gzz0,
Axx0, Axy0, Axz0, Ayy0, Ayz0, Azz0,
Gmx0, Gmy0, Gmz0, Sfx1, Sfy1, Sfz1, // here we can not touch rhs variables, but 1 variables
RoutMAP, ErrorMonitor);
Waveshell->surf_WaveMassPAng(Rex, lev, SH,
Rpsi4, Ipsi4, 2, maxl, NN, RP, IP,
phi0, trK0,
gxx0, gxy0, gxz0, gyy0, gyz0, gzz0,
Axx0, Axy0, Axz0, Ayy0, Ayz0, Azz0,
Gmx0, Gmy0, Gmz0, Sfx1, Sfy1, Sfz1,
RoutMAP, ErrorMonitor, !shell_mass_prepared);
shell_mass_prepared = true;
}
#else
#if (PSTR == 0)
Waveshell->surf_Wave(Rex, lev, GH, Rpsi4, Ipsi4, 2, maxl, NN, RP, IP, ErrorMonitor);
Waveshell->surf_MassPAng(Rex, lev, GH, phi0, trK0,
gxx0, gxy0, gxz0, gyy0, gyz0, gzz0,
Axx0, Axy0, Axz0, Ayy0, Ayz0, Azz0,
Gmx0, Gmy0, Gmz0, Sfx1, Sfy1, Sfz1, // here we can not touch rhs variables, but 1 variables
RoutMAP, ErrorMonitor);
Waveshell->surf_WaveMassPAng(Rex, lev, GH,
Rpsi4, Ipsi4, 2, maxl, NN, RP, IP,
phi0, trK0,
gxx0, gxy0, gxz0, gyy0, gyz0, gzz0,
Axx0, Axy0, Axz0, Ayy0, Ayz0, Azz0,
Gmx0, Gmy0, Gmz0, Sfx1, Sfy1, Sfz1,
RoutMAP, ErrorMonitor, !patch_mass_prepared);
patch_mass_prepared = true;
#elif (PSTR == 1 || PSTR == 2)
Waveshell->surf_Wave(Rex, lev, GH, Rpsi4, Ipsi4, 2, maxl, NN, RP, IP, ErrorMonitor, GH->Commlev[lev]);
// misc::tillherecheck(GH->Commlev[lev],GH->start_rank[lev],"after surf_Wave");
@@ -7188,7 +7513,8 @@ void bssn_class::AnalysisStuff(int lev, double dT_lev)
gxx0, gxy0, gxz0, gyy0, gyz0, gzz0,
Axx0, Axy0, Axz0, Ayy0, Ayz0, Azz0,
Gmx0, Gmy0, Gmz0, Sfx1, Sfy1, Sfz1, // here we can not touch rhs variables, but 1 variables
RoutMAP, ErrorMonitor, GH->Commlev[lev]);
RoutMAP, ErrorMonitor, GH->Commlev[lev], !patch_mass_prepared);
patch_mass_prepared = true;
#endif
#endif
// misc::tillherecheck(GH->Commlev[lev],GH->start_rank[lev],"end surface integral");
@@ -7261,7 +7587,7 @@ void bssn_class::Constraint_Out()
for (int lev = 0; lev < GH->levels; lev++)
{
// make sure the data consistent for higher levels
if (lev > 0) // if the constrait quantities can be reused from the step rhs calculation
if (lev > 0 && ConstraintRefreshLevels && ConstraintRefreshLevels[lev]) // only refresh levels whose grid layout changed after evolution
{
double TRK4 = PhysTime;
double ndeps = numepsb;
@@ -7415,35 +7741,18 @@ void bssn_class::Constraint_Out()
#if (PSTR == 1 || PSTR == 2)
double ConV_h[7];
#endif
var *ConstraintVars[7] = {Cons_Ham, Cons_Px, Cons_Py, Cons_Pz, Cons_Gx, Cons_Gy, Cons_Gz};
#ifdef WithShell
ConV[0] = SH->L2Norm(Cons_Ham);
ConV[1] = SH->L2Norm(Cons_Px);
ConV[2] = SH->L2Norm(Cons_Py);
ConV[3] = SH->L2Norm(Cons_Pz);
ConV[4] = SH->L2Norm(Cons_Gx);
ConV[5] = SH->L2Norm(Cons_Gy);
ConV[6] = SH->L2Norm(Cons_Gz);
SH->L2Norm7(ConstraintVars, ConV);
ConVMonitor->writefile(PhysTime, 7, ConV);
#endif
for (int levi = 0; levi < GH->levels; levi++)
{
#if (PSTR == 0)
ConV[0] = Parallel::L2Norm(GH->PatL[levi]->data, Cons_Ham);
ConV[1] = Parallel::L2Norm(GH->PatL[levi]->data, Cons_Px);
ConV[2] = Parallel::L2Norm(GH->PatL[levi]->data, Cons_Py);
ConV[3] = Parallel::L2Norm(GH->PatL[levi]->data, Cons_Pz);
ConV[4] = Parallel::L2Norm(GH->PatL[levi]->data, Cons_Gx);
ConV[5] = Parallel::L2Norm(GH->PatL[levi]->data, Cons_Gy);
ConV[6] = Parallel::L2Norm(GH->PatL[levi]->data, Cons_Gz);
Parallel::L2Norm7(GH->PatL[levi]->data, ConstraintVars, ConV);
#elif (PSTR == 1 || PSTR == 2)
ConV[0] = Parallel::L2Norm(GH->PatL[levi]->data, Cons_Ham, GH->Commlev[levi]);
ConV[1] = Parallel::L2Norm(GH->PatL[levi]->data, Cons_Px, GH->Commlev[levi]);
ConV[2] = Parallel::L2Norm(GH->PatL[levi]->data, Cons_Py, GH->Commlev[levi]);
ConV[3] = Parallel::L2Norm(GH->PatL[levi]->data, Cons_Pz, GH->Commlev[levi]);
ConV[4] = Parallel::L2Norm(GH->PatL[levi]->data, Cons_Gx, GH->Commlev[levi]);
ConV[5] = Parallel::L2Norm(GH->PatL[levi]->data, Cons_Gy, GH->Commlev[levi]);
ConV[6] = Parallel::L2Norm(GH->PatL[levi]->data, Cons_Gz, GH->Commlev[levi]);
Parallel::L2Norm7(GH->PatL[levi]->data, ConstraintVars, ConV, GH->Commlev[levi]);
// misc::tillherecheck("before collect data to cpu0");
// MPI_ALLREDUCE( sendbuf, recvbuf, count, datatype, op, comm), sendbu and recvbuf must be different
if (levi > 0)
@@ -7474,6 +7783,9 @@ void bssn_class::Constraint_Out()
Interp_Constraint(false);
LastConsOut = 0;
if (ConstraintRefreshLevels)
for (int lev = 0; lev < GH->levels; lev++)
ConstraintRefreshLevels[lev] = 0;
}
}

View File

@@ -48,6 +48,7 @@ public:
double StartTime, TotalTime;
double AnasTime, DumpTime, d2DumpTime, CheckTime;
double LastAnas, LastConsOut;
int *ConstraintRefreshLevels;
double Courant;
double numepss, numepsb, numepsh;
int Symmetry;
@@ -134,7 +135,7 @@ public:
Parallel::SyncCache *sync_cache_outbd; // cached OutBdLow2Hi in RestrictProlong
monitor *ErrorMonitor, *Psi4Monitor, *BHMonitor, *MAPMonitor;
monitor *ConVMonitor;
monitor *ConVMonitor, *TimingMonitor;
surface_integral *Waveshell;
checkpoint *CheckPoint;

View File

@@ -1891,7 +1891,7 @@ void bssn_class::Read_Ansorg()
void bssn_class::Evolve(int Steps)
{
double prev_clock = 0.0, curr_clock = 0.0;
clock_t prev_clock, curr_clock;
double LastDump = 0.0, LastCheck = 0.0, Last2dDump = 0.0;
LastAnas = 0;
#if 0
@@ -2037,8 +2037,6 @@ void bssn_class::Evolve(int Steps)
for (int ncount = 1; ncount < Steps + 1; ncount++)
{
if (myrank == 0)
curr_clock = MPI_Wtime();
cout << "Before Step: " << ncount << " My Rank: " << myrank
<< " takes " << MPI_Wtime() - beg_time << " seconds!" << endl;
beg_time = MPI_Wtime();
@@ -2098,9 +2096,9 @@ void bssn_class::Evolve(int Steps)
if (myrank == 0)
{
prev_clock = curr_clock;
curr_clock = MPI_Wtime();
curr_clock = clock();
cout << "Timestep # " << ncount << ": integrating to time: " << PhysTime << endl;
cout << "used " << (curr_clock - prev_clock) << " seconds!" << endl;
cout << "used " << (double)(curr_clock - prev_clock) / ((double)CLOCKS_PER_SEC) << " seconds!" << endl;
}
if (PhysTime >= TotalTime)

View File

@@ -32,6 +32,19 @@
#define f_compute_rhs_Z4c_ss compute_rhs_z4c_ss_
#define f_compute_constraint_fr compute_constraint_fr_
#endif
#ifdef __cplusplus
extern "C"
{
#endif
void f_bssn_rhs_kernel_timing_reset();
int f_bssn_rhs_kernel_timing_bucket_count();
const double *f_bssn_rhs_kernel_timing_local_seconds();
const char *f_bssn_rhs_kernel_timing_label(int);
#ifdef __cplusplus
}
#endif
extern "C"
{
int f_compute_rhs_bssn(int *, double &, double *, double *, double *, // ex,T,X,Y,Z

View File

@@ -2,30 +2,88 @@
#include "bssn_rhs.h"
#include "share_func.h"
#include "tool.h"
#ifdef _OPENMP
#define BSSN_OMP_TASK_GROUP_BEGIN \
_Pragma("omp parallel") \
{ \
_Pragma("omp single nowait") \
{
#define BSSN_OMP_TASK_CALL(...) \
_Pragma("omp task") { __VA_ARGS__; }
#define BSSN_OMP_TASK_GROUP_END \
_Pragma("omp taskwait") \
} \
}
#else
#define BSSN_OMP_TASK_GROUP_BEGIN {
#define BSSN_OMP_TASK_CALL(...) { __VA_ARGS__; }
#define BSSN_OMP_TASK_GROUP_END }
#endif
#include <time.h>
// 0-based i,j,k
// #define IDX_F(i,j,k,nx,ny) ((i) + (j)*(nx) + (k)*(nx)*(ny))
// ex(1)=nx, ex(2)=ny, ex(3)=nz
// 用法a[ IDX_F(i,j,k,nx,ny) ]
#ifndef BSSN_KERNEL_FINE_TIMING
#define BSSN_KERNEL_FINE_TIMING 0
#endif
#if BSSN_KERNEL_FINE_TIMING
namespace rhs_kernel_timing
{
enum Bucket
{
KB_SETUP_DERIVS = 0,
KB_GEOM_GAMMA,
KB_RICCI_METRIC,
KB_CHI_LAPSE,
KB_AIJ_TRK_GAUGE,
KB_KO_CONSTRAINT,
KB_COUNT
};
static double local_bucket_seconds[KB_COUNT];
static const char *bucket_labels[KB_COUNT] =
{
"setup_derivs",
"geom_gamma",
"ricci_metric",
"chi_lapse",
"aij_trk_gauge",
"ko_constraint"
};
static inline double now_seconds()
{
struct timespec ts;
clock_gettime(CLOCK_MONOTONIC, &ts);
return double(ts.tv_sec) + 1.0e-9 * double(ts.tv_nsec);
}
}
extern "C" void f_bssn_rhs_kernel_timing_reset()
{
for (int i = 0; i < rhs_kernel_timing::KB_COUNT; ++i)
rhs_kernel_timing::local_bucket_seconds[i] = 0.0;
}
extern "C" int f_bssn_rhs_kernel_timing_bucket_count()
{
return rhs_kernel_timing::KB_COUNT;
}
extern "C" const double *f_bssn_rhs_kernel_timing_local_seconds()
{
return rhs_kernel_timing::local_bucket_seconds;
}
extern "C" const char *f_bssn_rhs_kernel_timing_label(int bucket_index)
{
if (bucket_index < 0 || bucket_index >= rhs_kernel_timing::KB_COUNT)
return "unknown";
return rhs_kernel_timing::bucket_labels[bucket_index];
}
#define RHS_KERNEL_TIMER_DECL(var_name) const double var_name = rhs_kernel_timing::now_seconds()
#define RHS_KERNEL_TIMER_ADD(bucket_name, var_name) \
rhs_kernel_timing::local_bucket_seconds[int(rhs_kernel_timing::bucket_name)] += \
rhs_kernel_timing::now_seconds() - (var_name)
#else
extern "C" void f_bssn_rhs_kernel_timing_reset() {}
extern "C" int f_bssn_rhs_kernel_timing_bucket_count() { return 0; }
extern "C" const double *f_bssn_rhs_kernel_timing_local_seconds() { return 0; }
extern "C" const char *f_bssn_rhs_kernel_timing_label(int) { return "disabled"; }
#define RHS_KERNEL_TIMER_DECL(var_name)
#define RHS_KERNEL_TIMER_ADD(bucket_name, var_name)
#endif
// C function that calculates the right-hand side for BSSN equations
int f_compute_rhs_bssn(int *ex, double &T,
double *X, double *Y, double *Z,
@@ -120,26 +178,25 @@ int f_compute_rhs_bssn(int *ex, double &T,
dY = Y[1] - Y[0];
dZ = Z[1] - Z[0];
RHS_KERNEL_TIMER_DECL(timer_setup_derivs);
// 1ms //
for(int i=0;i<all;i+=1){
alpn1[i] = Lap[i] + 1.0;
chin1[i] = chi[i] + 1.0;
}
// 9ms //
BSSN_OMP_TASK_GROUP_BEGIN
BSSN_OMP_TASK_CALL(fderivs(ex,betax,betaxx,betaxy,betaxz,X,Y,Z,ANTI, SYM, SYM,Symmetry,Lev))
BSSN_OMP_TASK_CALL(fderivs(ex,betay,betayx,betayy,betayz,X,Y,Z, SYM,ANTI, SYM,Symmetry,Lev))
BSSN_OMP_TASK_CALL(fderivs(ex,betaz,betazx,betazy,betazz,X,Y,Z, SYM, SYM,ANTI,Symmetry,Lev))
BSSN_OMP_TASK_CALL(fderivs(ex,chi,chix,chiy,chiz,X,Y,Z,SYM,SYM,SYM,Symmetry,Lev))
BSSN_OMP_TASK_CALL(fderivs(ex,dxx,gxxx,gxxy,gxxz,X,Y,Z,SYM ,SYM ,SYM ,Symmetry,Lev))
BSSN_OMP_TASK_CALL(fderivs(ex,gxy,gxyx,gxyy,gxyz,X,Y,Z,ANTI,ANTI,SYM ,Symmetry,Lev))
BSSN_OMP_TASK_CALL(fderivs(ex,gxz,gxzx,gxzy,gxzz,X,Y,Z,ANTI,SYM ,ANTI,Symmetry,Lev))
BSSN_OMP_TASK_CALL(fderivs(ex,dyy,gyyx,gyyy,gyyz,X,Y,Z,SYM ,SYM ,SYM ,Symmetry,Lev))
BSSN_OMP_TASK_CALL(fderivs(ex,gyz,gyzx,gyzy,gyzz,X,Y,Z,SYM ,ANTI,ANTI,Symmetry,Lev))
BSSN_OMP_TASK_CALL(fderivs(ex,dzz,gzzx,gzzy,gzzz,X,Y,Z,SYM ,SYM ,SYM ,Symmetry,Lev))
BSSN_OMP_TASK_CALL(fderivs(ex,Lap,Lapx,Lapy,Lapz,X,Y,Z,SYM,SYM,SYM,Symmetry,Lev))
BSSN_OMP_TASK_CALL(fderivs(ex,trK,Kx,Ky,Kz,X,Y,Z,SYM,SYM,SYM,Symmetry,Lev))
BSSN_OMP_TASK_GROUP_END
fderivs(ex,betax,betaxx,betaxy,betaxz,X,Y,Z,ANTI, SYM, SYM,Symmetry,Lev);
fderivs(ex,betay,betayx,betayy,betayz,X,Y,Z, SYM,ANTI, SYM,Symmetry,Lev);
fderivs(ex,betaz,betazx,betazy,betazz,X,Y,Z, SYM, SYM,ANTI,Symmetry,Lev);
fderivs(ex,chi,chix,chiy,chiz,X,Y,Z,SYM,SYM,SYM,Symmetry,Lev);
fderivs(ex,dxx,gxxx,gxxy,gxxz,X,Y,Z,SYM ,SYM ,SYM ,Symmetry,Lev);
fderivs(ex,gxy,gxyx,gxyy,gxyz,X,Y,Z,ANTI,ANTI,SYM ,Symmetry,Lev);
fderivs(ex,gxz,gxzx,gxzy,gxzz,X,Y,Z,ANTI,SYM ,ANTI,Symmetry,Lev);
fderivs(ex,dyy,gyyx,gyyy,gyyz,X,Y,Z,SYM ,SYM ,SYM ,Symmetry,Lev);
fderivs(ex,gyz,gyzx,gyzy,gyzz,X,Y,Z,SYM ,ANTI,ANTI,Symmetry,Lev);
fderivs(ex,dzz,gzzx,gzzy,gzzz,X,Y,Z,SYM ,SYM ,SYM ,Symmetry,Lev);
fderivs(ex,Lap,Lapx,Lapy,Lapz,X,Y,Z,SYM,SYM,SYM,Symmetry,Lev);
fderivs(ex,trK,Kx,Ky,Kz,X,Y,Z,SYM,SYM,SYM,Symmetry,Lev);
// 3ms //
for(int i=0;i<all;i+=1){
@@ -161,6 +218,8 @@ int f_compute_rhs_bssn(int *ex, double &T,
(dxx[i] + ONE) * betaxz[i] + gxy[i] * betayz[i] + gyz[i] * betayx[i]
+ (dzz[i] + ONE) * betazx[i] - gxz[i] * betayy[i];
}
RHS_KERNEL_TIMER_ADD(KB_SETUP_DERIVS, timer_setup_derivs);
RHS_KERNEL_TIMER_DECL(timer_geom_gamma);
// Fused: inverse metric + Gamma constraint + Christoffel (3 loops -> 1)
for(int i=0;i<all;i+=1){
double det = (dxx[i] + ONE) * (dyy[i] + ONE) * (dzz[i] + ONE) + gxy[i] * gyz[i] * gxz[i] + gxz[i] * gxy[i] * gyz[i] -
@@ -303,9 +362,6 @@ int f_compute_rhs_bssn(int *ex, double &T,
+ ( gupxy[i]*gupyz[i] + gupyy[i]*gupxz[i] ) * Axy[i]
+ ( gupxy[i]*gupzz[i] + gupyz[i]*gupxz[i] ) * Axz[i]
+ ( gupyy[i]*gupzz[i] + gupyz[i]*gupyz[i] ) * Ayz[i];
Rxx[i] = axx; Ryy[i] = ayy; Rzz[i] = azz;
Rxy[i] = axy; Rxz[i] = axz; Ryz[i] = ayz;
Gamx_rhs[i] = - TWO * ( Lapx[i]*axx + Lapy[i]*axy + Lapz[i]*axz ) +
TWO * alpn1[i] * (
-F3o2/chin1[i] * ( chix[i]*axx + chiy[i]*axy + chiz[i]*axz ) -
@@ -335,15 +391,18 @@ int f_compute_rhs_bssn(int *ex, double &T,
+ TWO * ( Gamzxy[i]*axy + Gamzxz[i]*axz + Gamzyz[i]*ayz )
);
}
RHS_KERNEL_TIMER_ADD(KB_GEOM_GAMMA, timer_geom_gamma);
RHS_KERNEL_TIMER_DECL(timer_ricci_metric);
// 22.3ms //
BSSN_OMP_TASK_GROUP_BEGIN
BSSN_OMP_TASK_CALL(fdderivs(ex,betax,gxxx,gxyx,gxzx,gyyx,gyzx,gzzx,X,Y,Z,ANTI,SYM, SYM ,Symmetry,Lev))
BSSN_OMP_TASK_CALL(fdderivs(ex,betay,gxxy,gxyy,gxzy,gyyy,gyzy,gzzy,X,Y,Z,SYM ,ANTI,SYM ,Symmetry,Lev))
BSSN_OMP_TASK_CALL(fdderivs(ex,betaz,gxxz,gxyz,gxzz,gyyz,gyzz,gzzz,X,Y,Z,SYM ,SYM, ANTI,Symmetry,Lev))
BSSN_OMP_TASK_CALL(fderivs(ex,Gamx,Gamxx,Gamxy,Gamxz,X,Y,Z,ANTI,SYM ,SYM ,Symmetry,Lev))
BSSN_OMP_TASK_CALL(fderivs(ex,Gamy,Gamyx,Gamyy,Gamyz,X,Y,Z,SYM ,ANTI,SYM ,Symmetry,Lev))
BSSN_OMP_TASK_CALL(fderivs(ex,Gamz,Gamzx,Gamzy,Gamzz,X,Y,Z,SYM ,SYM ,ANTI,Symmetry,Lev))
BSSN_OMP_TASK_GROUP_END
fdderivs(ex,betax,gxxx,gxyx,gxzx,gyyx,gyzx,gzzx,
X,Y,Z,ANTI,SYM, SYM ,Symmetry,Lev);
fdderivs(ex,betay,gxxy,gxyy,gxzy,gyyy,gyzy,gzzy,
X,Y,Z,SYM ,ANTI,SYM ,Symmetry,Lev);
fdderivs(ex,betaz,gxxz,gxyz,gxzz,gyyz,gyzz,gzzz,
X,Y,Z,SYM ,SYM, ANTI,Symmetry,Lev);
fderivs(ex,Gamx,Gamxx,Gamxy,Gamxz,X,Y,Z,ANTI,SYM ,SYM ,Symmetry,Lev);
fderivs(ex,Gamy,Gamyx,Gamyy,Gamyz,X,Y,Z,SYM ,ANTI,SYM ,Symmetry,Lev);
fderivs(ex,Gamz,Gamzx,Gamzy,Gamzz,X,Y,Z,SYM ,SYM ,ANTI,Symmetry,Lev);
// Fused: fxx/Gamxa + Gamma_rhs part 2 (2 loops -> 1)
for(int i=0;i<all;i+=1){
@@ -351,7 +410,6 @@ int f_compute_rhs_bssn(int *ex, double &T,
double lfxx = gxxx[i] + gxyy[i] + gxzz[i];
double lfxy = gxyx[i] + gyyy[i] + gyzz[i];
double lfxz = gxzx[i] + gyzy[i] + gzzz[i];
fxx[i] = lfxx; fxy[i] = lfxy; fxz[i] = lfxz;
double gxa = gupxx[i]*Gamxxx[i] + gupyy[i]*Gamxyy[i] + gupzz[i]*Gamxzz[i]
+ TWO * ( gupxy[i]*Gamxxy[i] + gupxz[i]*Gamxxz[i] + gupyz[i]*Gamxyz[i] );
@@ -705,69 +763,74 @@ int f_compute_rhs_bssn(int *ex, double &T,
+ Gamxyz[i] * gzzx[i] + Gamyyz[i] * gzzy[i] + Gamzyz[i] * gzzz[i]
);
}
RHS_KERNEL_TIMER_ADD(KB_RICCI_METRIC, timer_ricci_metric);
RHS_KERNEL_TIMER_DECL(timer_chi_lapse);
// 22.3ms //
fdderivs(ex,chi,fxx,fxy,fxz,fyy,fyz,fzz,X,Y,Z,SYM,SYM,SYM,Symmetry,Lev);
// 7ms //
for (int i=0;i<all;i+=1) {
fxx[i] = fxx[i] - Gamxxx[i] * chix[i] - Gamyxx[i] * chiy[i] - Gamzxx[i] * chiz[i];
fxy[i] = fxy[i] - Gamxxy[i] * chix[i] - Gamyxy[i] * chiy[i] - Gamzxy[i] * chiz[i];
fxz[i] = fxz[i] - Gamxxz[i] * chix[i] - Gamyxz[i] * chiy[i] - Gamzxz[i] * chiz[i];
fyy[i] = fyy[i] - Gamxyy[i] * chix[i] - Gamyyy[i] * chiy[i] - Gamzyy[i] * chiz[i];
fyz[i] = fyz[i] - Gamxyz[i] * chix[i] - Gamyyz[i] * chiy[i] - Gamzyz[i] * chiz[i];
fzz[i] = fzz[i] - Gamxzz[i] * chix[i] - Gamyzz[i] * chiy[i] - Gamzzz[i] * chiz[i];
f[i] =
gupxx[i] * (fxx[i] - (F3o2 / chin1[i]) * chix[i] * chix[i])
+ gupyy[i] * (fyy[i] - (F3o2 / chin1[i]) * chiy[i] * chiy[i])
+ gupzz[i] * (fzz[i] - (F3o2 / chin1[i]) * chiz[i] * chiz[i])
+ TWO * gupxy[i] * (fxy[i] - (F3o2 / chin1[i]) * chix[i] * chiy[i])
+ TWO * gupxz[i] * (fxz[i] - (F3o2 / chin1[i]) * chix[i] * chiz[i])
+ TWO * gupyz[i] * (fyz[i] - (F3o2 / chin1[i]) * chiy[i] * chiz[i]);
Rxx[i] = Rxx[i] + ( fxx[i] - (chix[i] * chix[i]) / (chin1[i] * TWO) + (dxx[i] + ONE) * f[i] ) / (chin1[i] * TWO);
Ryy[i] = Ryy[i] + ( fyy[i] - (chiy[i] * chiy[i]) / (chin1[i] * TWO) + (dyy[i] + ONE) * f[i] ) / (chin1[i] * TWO);
Rzz[i] = Rzz[i] + ( fzz[i] - (chiz[i] * chiz[i]) / (chin1[i] * TWO) + (dzz[i] + ONE) * f[i] ) / (chin1[i] * TWO);
const double inv_chin1 = ONE / chin1[i];
const double half_inv_chin1 = HALF * inv_chin1;
const double scaled_inv = F3o2 * inv_chin1;
const double cxx = fxx[i] - Gamxxx[i] * chix[i] - Gamyxx[i] * chiy[i] - Gamzxx[i] * chiz[i];
const double cxy = fxy[i] - Gamxxy[i] * chix[i] - Gamyxy[i] * chiy[i] - Gamzxy[i] * chiz[i];
const double cxz = fxz[i] - Gamxxz[i] * chix[i] - Gamyxz[i] * chiy[i] - Gamzxz[i] * chiz[i];
const double cyy = fyy[i] - Gamxyy[i] * chix[i] - Gamyyy[i] * chiy[i] - Gamzyy[i] * chiz[i];
const double cyz = fyz[i] - Gamxyz[i] * chix[i] - Gamyyz[i] * chiy[i] - Gamzyz[i] * chiz[i];
const double czz = fzz[i] - Gamxzz[i] * chix[i] - Gamyzz[i] * chiy[i] - Gamzzz[i] * chiz[i];
const double ricci_chi =
gupxx[i] * (cxx - scaled_inv * chix[i] * chix[i])
+ gupyy[i] * (cyy - scaled_inv * chiy[i] * chiy[i])
+ gupzz[i] * (czz - scaled_inv * chiz[i] * chiz[i])
+ TWO * gupxy[i] * (cxy - scaled_inv * chix[i] * chiy[i])
+ TWO * gupxz[i] * (cxz - scaled_inv * chix[i] * chiz[i])
+ TWO * gupyz[i] * (cyz - scaled_inv * chiy[i] * chiz[i]);
f[i] = ricci_chi;
Rxx[i] = Rxx[i] + ( cxx - half_inv_chin1 * chix[i] * chix[i] + (dxx[i] + ONE) * ricci_chi ) * half_inv_chin1;
Ryy[i] = Ryy[i] + ( cyy - half_inv_chin1 * chiy[i] * chiy[i] + (dyy[i] + ONE) * ricci_chi ) * half_inv_chin1;
Rzz[i] = Rzz[i] + ( czz - half_inv_chin1 * chiz[i] * chiz[i] + (dzz[i] + ONE) * ricci_chi ) * half_inv_chin1;
Rxy[i] = Rxy[i] + ( fxy[i] - (chix[i] * chiy[i]) / (chin1[i] * TWO) + gxy[i] * f[i] ) / (chin1[i] * TWO);
Rxz[i] = Rxz[i] + ( fxz[i] - (chix[i] * chiz[i]) / (chin1[i] * TWO) + gxz[i] * f[i] ) / (chin1[i] * TWO);
Ryz[i] = Ryz[i] + ( fyz[i] - (chiy[i] * chiz[i]) / (chin1[i] * TWO) + gyz[i] * f[i] ) / (chin1[i] * TWO);
Rxy[i] = Rxy[i] + ( cxy - half_inv_chin1 * chix[i] * chiy[i] + gxy[i] * ricci_chi ) * half_inv_chin1;
Rxz[i] = Rxz[i] + ( cxz - half_inv_chin1 * chix[i] * chiz[i] + gxz[i] * ricci_chi ) * half_inv_chin1;
Ryz[i] = Ryz[i] + ( cyz - half_inv_chin1 * chiy[i] * chiz[i] + gyz[i] * ricci_chi ) * half_inv_chin1;
}
// 24ms //
fdderivs(ex,Lap,fxx,fxy,fxz,fyy,fyz,fzz,X,Y,Z,SYM,SYM,SYM,Symmetry,Lev);
fderivs(ex,chi,dtSfx_rhs,dtSfy_rhs,dtSfz_rhs,X,Y,Z,SYM,SYM,SYM,Symmetry,Lev);
// 6ms //
for (int i=0;i<all;i+=1) {
/* gxxx,gxxy,gxxz (这里是“升指标后的chi导数/chi”那类量你沿用原变量名即可) */
gxxx[i] = (gupxx[i] * chix[i] + gupxy[i] * chiy[i] + gupxz[i] * chiz[i]) / chin1[i];
gxxy[i] = (gupxy[i] * chix[i] + gupyy[i] * chiy[i] + gupyz[i] * chiz[i]) / chin1[i];
gxxz[i] = (gupxz[i] * chix[i] + gupyz[i] * chiy[i] + gupzz[i] * chiz[i]) / chin1[i];
const double inv_chin1 = ONE / chin1[i];
const double gchi_x = (gupxx[i] * chix[i] + gupxy[i] * chiy[i] + gupxz[i] * chiz[i]) * inv_chin1;
const double gchi_y = (gupxy[i] * chix[i] + gupyy[i] * chiy[i] + gupyz[i] * chiz[i]) * inv_chin1;
const double gchi_z = (gupxz[i] * chix[i] + gupyz[i] * chiy[i] + gupzz[i] * chiz[i]) * inv_chin1;
/* Christoffel 修正项 */
Gamxxx[i] = Gamxxx[i] - ( ((chix[i] + chix[i]) / chin1[i]) - (dxx[i] + ONE) * gxxx[i] ) * HALF;
Gamyxx[i] = Gamyxx[i] - ( 0.0 - (dxx[i] + ONE) * gxxy[i] ) * HALF; /* 原式只有 -gxx*gxxy */
Gamzxx[i] = Gamzxx[i] - ( 0.0 - (dxx[i] + ONE) * gxxz[i] ) * HALF;
Gamxxx[i] = Gamxxx[i] - ( ((chix[i] + chix[i]) * inv_chin1) - (dxx[i] + ONE) * gchi_x ) * HALF;
Gamyxx[i] = Gamyxx[i] - ( 0.0 - (dxx[i] + ONE) * gchi_y ) * HALF; /* 原式只有 -gxx*gxxy */
Gamzxx[i] = Gamzxx[i] - ( 0.0 - (dxx[i] + ONE) * gchi_z ) * HALF;
Gamxyy[i] = Gamxyy[i] - ( 0.0 - (dyy[i] + ONE) * gxxx[i] ) * HALF;
Gamyyy[i] = Gamyyy[i] - ( ((chiy[i] + chiy[i]) / chin1[i]) - (dyy[i] + ONE) * gxxy[i] ) * HALF;
Gamzyy[i] = Gamzyy[i] - ( 0.0 - (dyy[i] + ONE) * gxxz[i] ) * HALF;
Gamxyy[i] = Gamxyy[i] - ( 0.0 - (dyy[i] + ONE) * gchi_x ) * HALF;
Gamyyy[i] = Gamyyy[i] - ( ((chiy[i] + chiy[i]) * inv_chin1) - (dyy[i] + ONE) * gchi_y ) * HALF;
Gamzyy[i] = Gamzyy[i] - ( 0.0 - (dyy[i] + ONE) * gchi_z ) * HALF;
Gamxzz[i] = Gamxzz[i] - ( 0.0 - (dzz[i] + ONE) * gxxx[i] ) * HALF;
Gamyzz[i] = Gamyzz[i] - ( 0.0 - (dzz[i] + ONE) * gxxy[i] ) * HALF;
Gamzzz[i] = Gamzzz[i] - ( ((chiz[i] + chiz[i]) / chin1[i]) - (dzz[i] + ONE) * gxxz[i] ) * HALF;
Gamxzz[i] = Gamxzz[i] - ( 0.0 - (dzz[i] + ONE) * gchi_x ) * HALF;
Gamyzz[i] = Gamyzz[i] - ( 0.0 - (dzz[i] + ONE) * gchi_y ) * HALF;
Gamzzz[i] = Gamzzz[i] - ( ((chiz[i] + chiz[i]) * inv_chin1) - (dzz[i] + ONE) * gchi_z ) * HALF;
Gamxxy[i] = Gamxxy[i] - ( ( chiy[i] / chin1[i]) - gxy[i] * gxxx[i] ) * HALF;
Gamyxy[i] = Gamyxy[i] - ( ( chix[i] / chin1[i]) - gxy[i] * gxxy[i] ) * HALF;
Gamzxy[i] = Gamzxy[i] - ( 0.0 - gxy[i] * gxxz[i] ) * HALF;
Gamxxy[i] = Gamxxy[i] - ( ( chiy[i] * inv_chin1) - gxy[i] * gchi_x ) * HALF;
Gamyxy[i] = Gamyxy[i] - ( ( chix[i] * inv_chin1) - gxy[i] * gchi_y ) * HALF;
Gamzxy[i] = Gamzxy[i] - ( 0.0 - gxy[i] * gchi_z ) * HALF;
Gamxxz[i] = Gamxxz[i] - ( ( chiz[i] / chin1[i]) - gxz[i] * gxxx[i] ) * HALF;
Gamyxz[i] = Gamyxz[i] - ( 0.0 - gxz[i] * gxxy[i] ) * HALF;
Gamzxz[i] = Gamzxz[i] - ( ( chix[i] / chin1[i]) - gxz[i] * gxxz[i] ) * HALF;
Gamxxz[i] = Gamxxz[i] - ( ( chiz[i] * inv_chin1) - gxz[i] * gchi_x ) * HALF;
Gamyxz[i] = Gamyxz[i] - ( 0.0 - gxz[i] * gchi_y ) * HALF;
Gamzxz[i] = Gamzxz[i] - ( ( chix[i] * inv_chin1) - gxz[i] * gchi_z ) * HALF;
Gamxyz[i] = Gamxyz[i] - ( 0.0 - gyz[i] * gxxx[i] ) * HALF;
Gamyyz[i] = Gamyyz[i] - ( ( chiz[i] / chin1[i]) - gyz[i] * gxxy[i] ) * HALF;
Gamzyz[i] = Gamzyz[i] - ( ( chiy[i] / chin1[i]) - gyz[i] * gxxz[i] ) * HALF;
Gamxyz[i] = Gamxyz[i] - ( 0.0 - gyz[i] * gchi_x ) * HALF;
Gamyyz[i] = Gamyyz[i] - ( ( chiz[i] * inv_chin1) - gyz[i] * gchi_y ) * HALF;
Gamzyz[i] = Gamzyz[i] - ( ( chiy[i] * inv_chin1) - gyz[i] * gchi_z ) * HALF;
/* fxx..fyz 修正:减去 Γ * ∂Lap */
fxx[i] = fxx[i] - Gamxxx[i] * Lapx[i] - Gamyxx[i] * Lapy[i] - Gamzxx[i] * Lapz[i];
@@ -781,6 +844,8 @@ int f_compute_rhs_bssn(int *ex, double &T,
trK_rhs[i] = gupxx[i] * fxx[i] + gupyy[i] * fyy[i] + gupzz[i] * fzz[i]
+ TWO * ( gupxy[i] * fxy[i] + gupxz[i] * fxz[i] + gupyz[i] * fyz[i] );
}
RHS_KERNEL_TIMER_ADD(KB_CHI_LAPSE, timer_chi_lapse);
RHS_KERNEL_TIMER_DECL(timer_aij_trk_gauge);
// 2.5ms //
for (int i=0;i<all;i+=1) {
const double divb = betaxx[i] + betayy[i] + betazz[i];
@@ -1081,33 +1146,33 @@ int f_compute_rhs_bssn(int *ex, double &T,
dtSfz_rhs[i] = Gamz_rhs[i] - reta[i] * dtSfz[i];
#endif
}
RHS_KERNEL_TIMER_ADD(KB_AIJ_TRK_GAUGE, timer_aij_trk_gauge);
RHS_KERNEL_TIMER_DECL(timer_ko_constraint);
// advection + KO dissipation with shared symmetry buffer
BSSN_OMP_TASK_GROUP_BEGIN
BSSN_OMP_TASK_CALL(lopsided_kodis(ex,X,Y,Z,dxx,gxx_rhs,betax,betay,betaz,Symmetry,SSS,eps))
BSSN_OMP_TASK_CALL(lopsided_kodis(ex,X,Y,Z,Gamz,Gamz_rhs,betax,betay,betaz,Symmetry,SSA,eps))
BSSN_OMP_TASK_CALL(lopsided_kodis(ex,X,Y,Z,gxy,gxy_rhs,betax,betay,betaz,Symmetry,AAS,eps))
BSSN_OMP_TASK_CALL(lopsided_kodis(ex,X,Y,Z,Lap,Lap_rhs,betax,betay,betaz,Symmetry,SSS,eps))
BSSN_OMP_TASK_CALL(lopsided_kodis(ex,X,Y,Z,gxz,gxz_rhs,betax,betay,betaz,Symmetry,ASA,eps))
BSSN_OMP_TASK_CALL(lopsided_kodis(ex,X,Y,Z,betax,betax_rhs,betax,betay,betaz,Symmetry,ASS,eps))
BSSN_OMP_TASK_CALL(lopsided_kodis(ex,X,Y,Z,dyy,gyy_rhs,betax,betay,betaz,Symmetry,SSS,eps))
BSSN_OMP_TASK_CALL(lopsided_kodis(ex,X,Y,Z,betay,betay_rhs,betax,betay,betaz,Symmetry,SAS,eps))
BSSN_OMP_TASK_CALL(lopsided_kodis(ex,X,Y,Z,gyz,gyz_rhs,betax,betay,betaz,Symmetry,SAA,eps))
BSSN_OMP_TASK_CALL(lopsided_kodis(ex,X,Y,Z,betaz,betaz_rhs,betax,betay,betaz,Symmetry,SSA,eps))
BSSN_OMP_TASK_CALL(lopsided_kodis(ex,X,Y,Z,dzz,gzz_rhs,betax,betay,betaz,Symmetry,SSS,eps))
BSSN_OMP_TASK_CALL(lopsided_kodis(ex,X,Y,Z,dtSfx,dtSfx_rhs,betax,betay,betaz,Symmetry,ASS,eps))
BSSN_OMP_TASK_CALL(lopsided_kodis(ex,X,Y,Z,Axx,Axx_rhs,betax,betay,betaz,Symmetry,SSS,eps))
BSSN_OMP_TASK_CALL(lopsided_kodis(ex,X,Y,Z,dtSfy,dtSfy_rhs,betax,betay,betaz,Symmetry,SAS,eps))
BSSN_OMP_TASK_CALL(lopsided_kodis(ex,X,Y,Z,Axy,Axy_rhs,betax,betay,betaz,Symmetry,AAS,eps))
BSSN_OMP_TASK_CALL(lopsided_kodis(ex,X,Y,Z,dtSfz,dtSfz_rhs,betax,betay,betaz,Symmetry,SSA,eps))
BSSN_OMP_TASK_CALL(lopsided_kodis(ex,X,Y,Z,Axz,Axz_rhs,betax,betay,betaz,Symmetry,ASA,eps))
BSSN_OMP_TASK_CALL(lopsided_kodis(ex,X,Y,Z,Ayy,Ayy_rhs,betax,betay,betaz,Symmetry,SSS,eps))
BSSN_OMP_TASK_CALL(lopsided_kodis(ex,X,Y,Z,Ayz,Ayz_rhs,betax,betay,betaz,Symmetry,SAA,eps))
BSSN_OMP_TASK_CALL(lopsided_kodis(ex,X,Y,Z,Azz,Azz_rhs,betax,betay,betaz,Symmetry,SSS,eps))
BSSN_OMP_TASK_CALL(lopsided_kodis(ex,X,Y,Z,chi,chi_rhs,betax,betay,betaz,Symmetry,SSS,eps))
BSSN_OMP_TASK_CALL(lopsided_kodis(ex,X,Y,Z,trK,trK_rhs,betax,betay,betaz,Symmetry,SSS,eps))
BSSN_OMP_TASK_CALL(lopsided_kodis(ex,X,Y,Z,Gamx,Gamx_rhs,betax,betay,betaz,Symmetry,ASS,eps))
BSSN_OMP_TASK_CALL(lopsided_kodis(ex,X,Y,Z,Gamy,Gamy_rhs,betax,betay,betaz,Symmetry,SAS,eps))
BSSN_OMP_TASK_GROUP_END
lopsided_kodis(ex,X,Y,Z,dxx,gxx_rhs,betax,betay,betaz,Symmetry,SSS,eps);
lopsided_kodis(ex,X,Y,Z,Gamz,Gamz_rhs,betax,betay,betaz,Symmetry,SSA,eps);
lopsided_kodis(ex,X,Y,Z,gxy,gxy_rhs,betax,betay,betaz,Symmetry,AAS,eps);
lopsided_kodis(ex,X,Y,Z,Lap,Lap_rhs,betax,betay,betaz,Symmetry,SSS,eps);
lopsided_kodis(ex,X,Y,Z,gxz,gxz_rhs,betax,betay,betaz,Symmetry,ASA,eps);
lopsided_kodis(ex,X,Y,Z,betax,betax_rhs,betax,betay,betaz,Symmetry,ASS,eps);
lopsided_kodis(ex,X,Y,Z,dyy,gyy_rhs,betax,betay,betaz,Symmetry,SSS,eps);
lopsided_kodis(ex,X,Y,Z,betay,betay_rhs,betax,betay,betaz,Symmetry,SAS,eps);
lopsided_kodis(ex,X,Y,Z,gyz,gyz_rhs,betax,betay,betaz,Symmetry,SAA,eps);
lopsided_kodis(ex,X,Y,Z,betaz,betaz_rhs,betax,betay,betaz,Symmetry,SSA,eps);
lopsided_kodis(ex,X,Y,Z,dzz,gzz_rhs,betax,betay,betaz,Symmetry,SSS,eps);
lopsided_kodis(ex,X,Y,Z,dtSfx,dtSfx_rhs,betax,betay,betaz,Symmetry,ASS,eps);
lopsided_kodis(ex,X,Y,Z,Axx,Axx_rhs,betax,betay,betaz,Symmetry,SSS,eps);
lopsided_kodis(ex,X,Y,Z,dtSfy,dtSfy_rhs,betax,betay,betaz,Symmetry,SAS,eps);
lopsided_kodis(ex,X,Y,Z,Axy,Axy_rhs,betax,betay,betaz,Symmetry,AAS,eps);
lopsided_kodis(ex,X,Y,Z,dtSfz,dtSfz_rhs,betax,betay,betaz,Symmetry,SSA,eps);
lopsided_kodis(ex,X,Y,Z,Axz,Axz_rhs,betax,betay,betaz,Symmetry,ASA,eps);
lopsided_kodis(ex,X,Y,Z,Ayy,Ayy_rhs,betax,betay,betaz,Symmetry,SSS,eps);
lopsided_kodis(ex,X,Y,Z,Ayz,Ayz_rhs,betax,betay,betaz,Symmetry,SAA,eps);
lopsided_kodis(ex,X,Y,Z,Azz,Azz_rhs,betax,betay,betaz,Symmetry,SSS,eps);
lopsided_kodis(ex,X,Y,Z,chi,chi_rhs,betax,betay,betaz,Symmetry,SSS,eps);
lopsided_kodis(ex,X,Y,Z,trK,trK_rhs,betax,betay,betaz,Symmetry,SSS,eps);
lopsided_kodis(ex,X,Y,Z,Gamx,Gamx_rhs,betax,betay,betaz,Symmetry,ASS,eps);
lopsided_kodis(ex,X,Y,Z,Gamy,Gamy_rhs,betax,betay,betaz,Symmetry,SAS,eps);
// 2ms //
if(co==0){
for (int i=0;i<all;i+=1) {
@@ -1154,14 +1219,12 @@ int f_compute_rhs_bssn(int *ex, double &T,
}
// 1ms //
BSSN_OMP_TASK_GROUP_BEGIN
BSSN_OMP_TASK_CALL(fderivs(ex,Axx,gxxx,gxxy,gxxz,X,Y,Z,SYM ,SYM ,SYM ,Symmetry,0))
BSSN_OMP_TASK_CALL(fderivs(ex,Axy,gxyx,gxyy,gxyz,X,Y,Z,ANTI,ANTI,SYM ,Symmetry,0))
BSSN_OMP_TASK_CALL(fderivs(ex,Axz,gxzx,gxzy,gxzz,X,Y,Z,ANTI,SYM ,ANTI,Symmetry,0))
BSSN_OMP_TASK_CALL(fderivs(ex,Ayy,gyyx,gyyy,gyyz,X,Y,Z,SYM ,SYM ,SYM ,Symmetry,0))
BSSN_OMP_TASK_CALL(fderivs(ex,Ayz,gyzx,gyzy,gyzz,X,Y,Z,SYM ,ANTI,ANTI,Symmetry,0))
BSSN_OMP_TASK_CALL(fderivs(ex,Azz,gzzx,gzzy,gzzz,X,Y,Z,SYM ,SYM ,SYM ,Symmetry,0))
BSSN_OMP_TASK_GROUP_END
fderivs(ex,Axx,gxxx,gxxy,gxxz,X,Y,Z,SYM ,SYM ,SYM ,Symmetry,0);
fderivs(ex,Axy,gxyx,gxyy,gxyz,X,Y,Z,ANTI,ANTI,SYM ,Symmetry,0);
fderivs(ex,Axz,gxzx,gxzy,gxzz,X,Y,Z,ANTI,SYM ,ANTI,Symmetry,0);
fderivs(ex,Ayy,gyyx,gyyy,gyyz,X,Y,Z,SYM ,SYM ,SYM ,Symmetry,0);
fderivs(ex,Ayz,gyzx,gyzy,gyzz,X,Y,Z,SYM ,ANTI,ANTI,Symmetry,0);
fderivs(ex,Azz,gzzx,gzzy,gzzz,X,Y,Z,SYM ,SYM ,SYM ,Symmetry,0);
// 7ms //
for (int i=0;i<all;i+=1) {
gxxx[i] = gxxx[i] - ( Gamxxx[i] * Axx[i] + Gamyxx[i] * Axy[i] + Gamzxx[i] * Axz[i]
@@ -1216,6 +1279,7 @@ int f_compute_rhs_bssn(int *ex, double &T,
movz_Res[i] = movz_Res[i] - F2o3*Kz[i] - F8*PI*Sz[i];
}
}
RHS_KERNEL_TIMER_ADD(KB_KO_CONSTRAINT, timer_ko_constraint);

View File

@@ -41,8 +41,8 @@ void fdderivs(const int ex[3],
const size_t nz = (size_t)ex3 + 2;
const size_t fh_size = nx * ny * nz;
static thread_local double *fh = NULL;
static thread_local size_t cap = 0;
static double *fh = NULL;
static size_t cap = 0;
if (fh_size > cap) {
free(fh);

View File

@@ -50,8 +50,8 @@ void fderivs(const int ex[3],
const size_t ny = (size_t)ex2 + 2;
const size_t nz = (size_t)ex3 + 2;
const size_t fh_size = nx * ny * nz;
static thread_local double *fh = NULL;
static thread_local size_t cap = 0;
static double *fh = NULL;
static size_t cap = 0;
if (fh_size > cap) {
free(fh);

View File

@@ -1514,6 +1514,81 @@ f_out = f_out*dX*dY*dZ
return
end subroutine l2normhelper
!--------------------------------------------------------------------------------------
subroutine l2normhelper7(ex, X, Y, Z,xmin,ymin,zmin,xmax,ymax,zmax,&
f1,f2,f3,f4,f5,f6,f7,f_out,gw)
implicit none
!~~~~~~> Input parameters:
integer,intent(in ):: ex(1:3)
real*8, intent(in ):: X(1:ex(1)),Y(1:ex(2)),Z(1:ex(3)),xmin,ymin,zmin,xmax,ymax,zmax
integer,intent(in)::gw
real*8, dimension(ex(1),ex(2),ex(3)),intent(in) :: f1,f2,f3,f4,f5,f6,f7
real*8, intent(out) :: f_out(7)
!~~~~~~> Other variables:
real*8 :: dX, dY, dZ
integer::imin,jmin,kmin
integer::imax,jmax,kmax
integer::i,j,k
real*8 :: s1,s2,s3,s4,s5,s6,s7
dX = X(2) - X(1)
dY = Y(2) - Y(1)
dZ = Z(2) - Z(1)
! for ghost zone
imin = gw+1
jmin = gw+1
kmin = gw+1
imax = ex(1) - gw
jmax = ex(2) - gw
kmax = ex(3) - gw
!for patch boundary (i.e., not ghost boundary)
if(dabs(X(ex(1))-xmax) < dX) imax = ex(1)
if(dabs(Y(ex(2))-ymax) < dY) jmax = ex(2)
if(dabs(Z(ex(3))-zmax) < dZ) kmax = ex(3)
if(dabs(X(1)-xmin) < dX) imin = 1
if(dabs(Y(1)-ymin) < dY) jmin = 1
if(dabs(Z(1)-zmin) < dZ) kmin = 1
s1 = 0.d0
s2 = 0.d0
s3 = 0.d0
s4 = 0.d0
s5 = 0.d0
s6 = 0.d0
s7 = 0.d0
do k=kmin,kmax
do j=jmin,jmax
!DIR$ SIMD REDUCTION(+:s1,s2,s3,s4,s5,s6,s7)
do i=imin,imax
s1 = s1 + f1(i,j,k)*f1(i,j,k)
s2 = s2 + f2(i,j,k)*f2(i,j,k)
s3 = s3 + f3(i,j,k)*f3(i,j,k)
s4 = s4 + f4(i,j,k)*f4(i,j,k)
s5 = s5 + f5(i,j,k)*f5(i,j,k)
s6 = s6 + f6(i,j,k)*f6(i,j,k)
s7 = s7 + f7(i,j,k)*f7(i,j,k)
enddo
enddo
enddo
f_out(1) = s1*dX*dY*dZ
f_out(2) = s2*dX*dY*dZ
f_out(3) = s3*dX*dY*dZ
f_out(4) = s4*dX*dY*dZ
f_out(5) = s5*dX*dY*dZ
f_out(6) = s6*dX*dY*dZ
f_out(7) = s7*dX*dY*dZ
return
end subroutine l2normhelper7
!--------------------------------------------------------------------------------------
! calculate L2norm especially for shell Blocks
subroutine l2normhelper_sh(ex, X, Y, Z,xmin,ymin,zmin,xmax,ymax,zmax,&

View File

@@ -13,6 +13,7 @@
#define f_global_interpind2d global_interpind2d
#define f_global_interpind1d global_interpind1d
#define f_l2normhelper l2normhelper
#define f_l2normhelper7 l2normhelper7
#define f_l2normhelper_sh l2normhelper_sh
#define f_l2normhelper_sh_rms l2normhelper_sh_rms
#define f_average average
@@ -42,6 +43,7 @@
#define f_global_interpind2d GLOBAL_INTERPIND2D
#define f_global_interpind1d GLOBAL_INTERPIND1D
#define f_l2normhelper L2NORMHELPER
#define f_l2normhelper7 L2NORMHELPER7
#define f_l2normhelper_sh L2NORMHELPER_SH
#define f_l2normhelper_sh_rms L2NORMHELPER_SH_RMS
#define f_average AVERAGE
@@ -71,6 +73,7 @@
#define f_global_interpind2d global_interpind2d_
#define f_global_interpind1d global_interpind1d_
#define f_l2normhelper l2normhelper_
#define f_l2normhelper7 l2normhelper7_
#define f_l2normhelper_sh l2normhelper_sh_
#define f_l2normhelper_sh_rms l2normhelper_sh_rms_
#define f_average average_
@@ -164,6 +167,15 @@ extern "C"
double *, double &, int &);
}
extern "C"
{
void f_l2normhelper7(int *, double *, double *, double *,
double &, double &, double &,
double &, double &, double &,
double *, double *, double *, double *,
double *, double *, double *, double *, int &);
}
extern "C"
{
void f_l2normhelper_sh(int *, double *, double *, double *,

View File

@@ -43,13 +43,7 @@ void lopsided_kodis(const int ex[3],
const size_t nz = (size_t)ex3 + 3;
const size_t fh_size = nx * ny * nz;
static thread_local double *fh = NULL;
static thread_local size_t cap = 0;
if (fh_size > cap) {
free(fh);
fh = (double*)aligned_alloc(64, fh_size * sizeof(double));
cap = fh_size;
}
double *fh = (double*)malloc(fh_size * sizeof(double));
if (!fh) return;
symmetry_bd(3, ex, f, fh, SoA);
@@ -249,4 +243,6 @@ void lopsided_kodis(const int ex[3],
}
}
}
free(fh);
}

View File

@@ -29,6 +29,16 @@
#define REGLEV 0
#define BSSN_FINE_TIMING 0
#define BSSN_FINE_TIMING_EVERY 1
#define BSSN_FINE_TIMING_TOPN 8
#define BSSN_KERNEL_FINE_TIMING 0
#define BSSN_ENABLE_STDIN_ABORT_POLL 0
//#define USE_GPU
//#define CHECKDETAIL
@@ -88,6 +98,21 @@
// 0: for every level;
// 1: for all
//
// define BSSN_FINE_TIMING
// enable fine-grained per-timestep timing monitor
//
// define BSSN_FINE_TIMING_EVERY
// report timing every N coarse timesteps
//
// define BSSN_FINE_TIMING_TOPN
// number of hottest timing buckets shown in stdout
//
// define BSSN_KERNEL_FINE_TIMING
// enable split timing inside compute_rhs_bssn
//
// define BSSN_ENABLE_STDIN_ABORT_POLL
// poll stdin and broadcast abort flag every coarse step
//
// define USE_GPU
// use gpu or not
//
@@ -142,4 +167,3 @@
#define TINY 1e-10
#endif /* MICRODEF_H */

View File

@@ -16,7 +16,7 @@ PROFDATA = /home/$(shell whoami)/AMSS-NCKU/pgo_profile/default.profdata
ifeq ($(PGO_MODE),instrument)
## Phase 1: instrumentation — omit -ipo/-fp-model fast=2 for faster build and numerical stability
CXXAPPFLAGS = -O3 -xHost -fma -fprofile-instr-generate -ipo \
-Dfortran3 -Dnewc -I${MKLROOT}/include $(INTERP_LB_FLAGS) $(OPENMP_FLAGS)
-Dfortran3 -Dnewc -I${MKLROOT}/include $(INTERP_LB_FLAGS)
f90appflags = -O3 -xHost -fma -fprofile-instr-generate -ipo \
-align array64byte -fpp -I${MKLROOT}/include $(POLINT6_FLAG)
else
@@ -26,7 +26,7 @@ else
CXXAPPFLAGS = -O3 -xHost -fp-model fast=2 -fma -ipo \
-Dfortran3 -Dnewc -I${MKLROOT}/include $(INTERP_LB_FLAGS) $(OPENMP_FLAGS)
-Dfortran3 -Dnewc -I${MKLROOT}/include $(INTERP_LB_FLAGS)
f90appflags = -O3 -xHost -fp-model fast=2 -fma -ipo \
-align array64byte -fpp -I${MKLROOT}/include $(POLINT6_FLAG)
endif

View File

@@ -29,9 +29,6 @@ endif
## instrument : PGO Phase 1 instrumentation to collect fresh profile data
PGO_MODE ?= opt
## OpenMP switch for C/C++ kernels
OPENMP_FLAGS ?= -qopenmp
## Interp_Points load balance profiling mode
## off : (default) no load balance instrumentation
## profile : Pass 1 — instrument Interp_Points to collect timing profile

View File

@@ -319,7 +319,7 @@ void scalar_class::Setup_Initial_Data()
}
void scalar_class::Evolve(int Steps)
{
double prev_clock = 0.0, curr_clock = 0.0;
clock_t prev_clock, curr_clock;
double LastDump = 0.0, LastCheck = 0.0;
LastAnas = 0;
@@ -328,7 +328,7 @@ void scalar_class::Evolve(int Steps)
for (int ncount = 1; ncount < Steps + 1; ncount++)
{
if (myrank == 0)
curr_clock = MPI_Wtime();
curr_clock = clock();
RecursiveStep(0);
LastDump += dT_mon;
@@ -346,9 +346,9 @@ void scalar_class::Evolve(int Steps)
if (myrank == 0)
{
prev_clock = curr_clock;
curr_clock = MPI_Wtime();
curr_clock = clock();
cout << " Timestep # " << ncount << ": integrating to time: " << PhysTime
<< " Computer used " << (curr_clock - prev_clock) << " seconds! " << endl;
<< " Computer used " << (double)(curr_clock - prev_clock) / ((double)CLOCKS_PER_SEC) << " seconds! " << endl;
}
if (PhysTime >= TotalTime)
break;

File diff suppressed because it is too large Load Diff

View File

@@ -36,6 +36,11 @@ private:
double *nx_g, *ny_g, *nz_g; // global list of unit normals
int myrank, cpusize;
int wave_cache_spinw, wave_cache_maxl, wave_cache_modes;
double *wave_theta_pos, *wave_theta_neg;
double *wave_phi_cos, *wave_phi_sin;
void clear_wave_cache();
void build_wave_cache(int spinw, int maxl);
public:
surface_integral(int iSymmetry);
@@ -82,13 +87,29 @@ public:
var *Axx, var *Axy, var *Axz, var *Ayy, var *Ayz, var *Azz,
var *Gmx, var *Gmy, var *Gmz,
var *Sfx_rhs, var *Sfy_rhs, var *Sfz_rhs,
double *Rout, monitor *Monitor);
double *Rout, monitor *Monitor, bool refresh_mass_fields = true);
void surf_MassPAng(double rex, int lev, ShellPatch *GH, var *chi, var *trK,
var *gxx, var *gxy, var *gxz, var *gyy, var *gyz, var *gzz,
var *Axx, var *Axy, var *Axz, var *Ayy, var *Ayz, var *Azz,
var *Gmx, var *Gmy, var *Gmz,
var *Sfx_rhs, var *Sfy_rhs, var *Sfz_rhs,
double *Rout, monitor *Monitor);
double *Rout, monitor *Monitor, bool refresh_mass_fields = true);
void surf_WaveMassPAng(double rex, int lev, cgh *GH,
var *Rpsi4, var *Ipsi4, int spinw, int maxl, int NN, double *RP, double *IP,
var *chi, var *trK,
var *gxx, var *gxy, var *gxz, var *gyy, var *gyz, var *gzz,
var *Axx, var *Axy, var *Axz, var *Ayy, var *Ayz, var *Azz,
var *Gmx, var *Gmy, var *Gmz,
var *Sfx_rhs, var *Sfy_rhs, var *Sfz_rhs,
double *Rout, monitor *Monitor, bool refresh_mass_fields = true);
void surf_WaveMassPAng(double rex, int lev, ShellPatch *GH,
var *Rpsi4, var *Ipsi4, int spinw, int maxl, int NN, double *RP, double *IP,
var *chi, var *trK,
var *gxx, var *gxy, var *gxz, var *gyy, var *gyz, var *gzz,
var *Axx, var *Axy, var *Axz, var *Ayy, var *Ayz, var *Azz,
var *Gmx, var *Gmy, var *Gmz,
var *Sfx_rhs, var *Sfy_rhs, var *Sfz_rhs,
double *Rout, monitor *Monitor, bool refresh_mass_fields = true);
void surf_Wave(double rex, cgh *GH, ShellPatch *SH,
var *chi, var *trK,
var *gxx, var *gxy, var *gxz, var *gyy, var *gyz, var *gzz,
@@ -115,7 +136,7 @@ public:
var *Axx, var *Axy, var *Axz, var *Ayy, var *Ayz, var *Azz,
var *Gmx, var *Gmy, var *Gmz,
var *Sfx_rhs, var *Sfy_rhs, var *Sfz_rhs, // temparay memory for mass^i
double *Rout, monitor *Monitor, MPI_Comm Comm_here);
double *Rout, monitor *Monitor, MPI_Comm Comm_here, bool refresh_mass_fields = true);
void surf_Wave(double rex, int lev, cgh *GH, var *Rpsi4, var *Ipsi4,
int spinw, int maxl, int NN, double *RP, double *IP,
monitor *Monitor, MPI_Comm Comm_here);

View File

@@ -144,6 +144,62 @@ def generate_macrodef_h():
print( "#define REGLEV 0", file=file1 )
print( file=file1 )
# Define fine-grained timing/debug macros.
# All of them default to OFF so production builds do not pay profiling overhead.
fine_timing = getattr(input_data, "Fine_Timing",
getattr(input_data, "Finegrained_Timing", "no"))
kernel_fine_timing = getattr(input_data, "Kernel_Fine_Timing",
getattr(input_data, "BSSN_Kernel_Fine_Timing", "no"))
stdin_abort_poll = getattr(input_data, "Enable_Stdin_Abort_Poll",
getattr(input_data, "Stdin_Abort_Poll", "no"))
timing_report_every = max(1, int(getattr(
input_data, "Timing_Every_Steps",
getattr(input_data, "Timing_Report_Every", 1))))
timing_top_hotspots = max(1, int(getattr(
input_data, "Timing_Top_Hotspots", 8)))
if ( fine_timing == "yes" ):
print( "#define BSSN_FINE_TIMING 1", file=file1 )
print( file=file1 )
elif ( fine_timing == "no" ):
print( "#define BSSN_FINE_TIMING 0", file=file1 )
print( file=file1 )
else:
print( "Fine_Timing setting error!!!" )
print()
print( "# Fine_Timing setting error!!!", file=file1 )
print( file=file1 )
print( f"#define BSSN_FINE_TIMING_EVERY {timing_report_every}", file=file1 )
print( file=file1 )
print( f"#define BSSN_FINE_TIMING_TOPN {timing_top_hotspots}", file=file1 )
print( file=file1 )
if ( kernel_fine_timing == "yes" ):
print( "#define BSSN_KERNEL_FINE_TIMING 1", file=file1 )
print( file=file1 )
elif ( kernel_fine_timing == "no" ):
print( "#define BSSN_KERNEL_FINE_TIMING 0", file=file1 )
print( file=file1 )
else:
print( "Kernel_Fine_Timing setting error!!!" )
print()
print( "# Kernel_Fine_Timing setting error!!!", file=file1 )
print( file=file1 )
if ( stdin_abort_poll == "yes" ):
print( "#define BSSN_ENABLE_STDIN_ABORT_POLL 1", file=file1 )
print( file=file1 )
elif ( stdin_abort_poll == "no" ):
print( "#define BSSN_ENABLE_STDIN_ABORT_POLL 0", file=file1 )
print( file=file1 )
else:
print( "Enable_Stdin_Abort_Poll setting error!!!" )
print()
print( "# Enable_Stdin_Abort_Poll setting error!!!", file=file1 )
print( file=file1 )
# Define macro USE_GPU
# use GPU or not
@@ -224,6 +280,21 @@ def generate_macrodef_h():
print( "// 0: for every level;", file=file1 )
print( "// 1: for all", file=file1 )
print( "//", file=file1 )
print( "// define BSSN_FINE_TIMING", file=file1 )
print( "// enable fine-grained per-timestep timing monitor", file=file1 )
print( "//", file=file1 )
print( "// define BSSN_FINE_TIMING_EVERY", file=file1 )
print( "// report timing every N coarse timesteps", file=file1 )
print( "//", file=file1 )
print( "// define BSSN_FINE_TIMING_TOPN", file=file1 )
print( "// number of hottest timing buckets shown in stdout", file=file1 )
print( "//", file=file1 )
print( "// define BSSN_KERNEL_FINE_TIMING", file=file1 )
print( "// enable split timing inside compute_rhs_bssn", file=file1 )
print( "//", file=file1 )
print( "// define BSSN_ENABLE_STDIN_ABORT_POLL", file=file1 )
print( "// poll stdin and broadcast abort flag every coarse step", file=file1 )
print( "//", file=file1 )
print( "// define USE_GPU", file=file1 )
print( "// use gpu or not", file=file1 )
print( "//", file=file1 )

View File

@@ -9,7 +9,6 @@
import AMSS_NCKU_Input as input_data
import os
import subprocess
import time
@@ -55,44 +54,6 @@ NUMACTL_CPU_BIND = get_last_n_cores_per_socket(n=32)
BUILD_JOBS = 64
def build_abe_runtime_env():
"""Inject OpenMP runtime settings only for the main ABE evolution run."""
runtime_env = os.environ.copy()
omp_threads = max(1, int(getattr(input_data, "OMP_Threads", 1)))
runtime_env["OMP_NUM_THREADS"] = str(omp_threads)
return runtime_env
def build_twopuncture_runtime_env():
"""Let TwoPunctureABE use the runtime default instead of the ABE OMP override."""
runtime_env = os.environ.copy()
runtime_env.pop("OMP_NUM_THREADS", None)
runtime_env.pop("OMP_THREAD_LIMIT", None)
return runtime_env
def build_mpi_launch_args():
"""Build optional host-distribution arguments for mpirun."""
hosts = list(getattr(input_data, "MPI_hosts", []))
ppn = int(getattr(input_data, "MPI_processes_per_node", 0))
if not hosts:
return ""
if ppn > 0:
expected = len(hosts) * ppn
if int(input_data.MPI_processes) != expected:
raise ValueError(
f"MPI_processes={input_data.MPI_processes} does not match "
f"len(MPI_hosts) * MPI_processes_per_node = {expected}"
)
launch_args = f"-hosts {','.join(hosts)}"
if ppn > 0:
launch_args += f" -ppn {ppn}"
return launch_args
##################################################################
@@ -182,38 +143,19 @@ def run_ABE():
print( )
print( " Running the AMSS-NCKU executable file ABE/ABEGPU " )
print( )
print( f" MPI processes = {input_data.MPI_processes}, OMP threads per process = {max(1, int(getattr(input_data, 'OMP_Threads', 1)))}" )
if getattr(input_data, "MPI_hosts", []):
print( f" MPI hosts = {getattr(input_data, 'MPI_hosts', [])}, MPI ranks per node = {int(getattr(input_data, 'MPI_processes_per_node', 0))}" )
print( " Multi-node runs require the working directory to be visible on all MPI hosts. " )
print( )
## Define the command to run; cast other values to strings as needed
mpi_launch_args = build_mpi_launch_args()
if (input_data.GPU_Calculation == "no"):
mpi_command = NUMACTL_CPU_BIND + " mpirun "
if mpi_launch_args:
mpi_command += mpi_launch_args + " "
mpi_command += "-np " + str(input_data.MPI_processes) + " ./ABE"
mpi_command = NUMACTL_CPU_BIND + " mpirun -np " + str(input_data.MPI_processes) + " ./ABE"
#mpi_command = " mpirun -np " + str(input_data.MPI_processes) + " ./ABE"
mpi_command_outfile = "ABE_out.log"
elif (input_data.GPU_Calculation == "yes"):
mpi_command = NUMACTL_CPU_BIND + " mpirun "
if mpi_launch_args:
mpi_command += mpi_launch_args + " "
mpi_command += "-np " + str(input_data.MPI_processes) + " ./ABEGPU"
mpi_command = NUMACTL_CPU_BIND + " mpirun -np " + str(input_data.MPI_processes) + " ./ABEGPU"
mpi_command_outfile = "ABEGPU_out.log"
## Execute the MPI command and stream output
mpi_process = subprocess.Popen(
mpi_command,
shell=True,
stdout=subprocess.PIPE,
stderr=subprocess.STDOUT,
text=True,
env=build_abe_runtime_env(),
)
mpi_process = subprocess.Popen(mpi_command, shell=True, stdout=subprocess.PIPE, stderr=subprocess.STDOUT, text=True)
## Write ABE run output to file while printing to stdout
with open(mpi_command_outfile, 'w') as file0:
@@ -253,14 +195,7 @@ def run_TwoPunctureABE():
TwoPuncture_command_outfile = "TwoPunctureABE_out.log"
## Execute the command with subprocess.Popen and stream output
TwoPuncture_process = subprocess.Popen(
TwoPuncture_command,
shell=True,
stdout=subprocess.PIPE,
stderr=subprocess.STDOUT,
text=True,
env=build_twopuncture_runtime_env(),
)
TwoPuncture_process = subprocess.Popen(TwoPuncture_command, shell=True, stdout=subprocess.PIPE, stderr=subprocess.STDOUT, text=True)
## Write TwoPunctureABE run output to file while printing to stdout
with open(TwoPuncture_command_outfile, 'w') as file0:

View File

@@ -68,10 +68,6 @@ def print_input_data( File_directory ):
print( " Printing the basic parameter and setting in the AMSS-NCKU simulation " )
print( )
print( " The number of MPI processes in the AMSS-NCKU simulation = ", input_data.MPI_processes )
print( " The number of OMP threads per MPI process = ", input_data.OMP_Threads )
if getattr(input_data, "MPI_hosts", []):
print( " The MPI host list in the AMSS-NCKU simulation = ", input_data.MPI_hosts )
print( " The number of MPI ranks launched per host = ", input_data.MPI_processes_per_node )
print( )
print( " The form of computational equation = ", input_data.Equation_Class )
print( " The initial data in this simulation = ", input_data.Initial_Data_Method )
@@ -147,10 +143,6 @@ def print_input_data( File_directory ):
print( " Printing the basic parameter and setting in the AMSS-NCKU simulation ", file=file0 )
print( file=file0 )
print( " The number of MPI processes in the AMSS-NCKU simulation = ", input_data.MPI_processes, file=file0 )
print( " The number of OMP threads per MPI process = ", input_data.OMP_Threads, file=file0 )
if getattr(input_data, "MPI_hosts", []):
print( " The MPI host list in the AMSS-NCKU simulation = ", input_data.MPI_hosts, file=file0 )
print( " The number of MPI ranks launched per host = ", input_data.MPI_processes_per_node, file=file0 )
print( file=file0 )
print( " The form of computational equation = ", input_data.Equation_Class, file=file0 )
print( " The initial data in this simulation = ", input_data.Initial_Data_Method, file=file0 )