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10 Commits
cjy-cassiu
...
cjy-goldst
| Author | SHA1 | Date | |
|---|---|---|---|
| 9c31384b2f | |||
| e4e741caa1 | |||
| 65e0f95f40 | |||
| f9fbf97e64 | |||
| 968522995b | |||
| f3988ac8ca | |||
| e4c25eb21f | |||
| 4b10519876 | |||
| 3a58273501 | |||
| 5c65cea2f0 |
@@ -16,10 +16,7 @@ import numpy
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File_directory = "GW150914" ## output file directory
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Output_directory = "binary_output" ## binary data file directory
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## The file directory name should not be too long
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MPI_processes = 64 ## number of mpi processes used in the simulation
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OMP_Threads = 3 ## number of OpenMP threads used by each MPI process
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MPI_hosts = ["localhost", "192.168.20.102"] ## MPI hosts for multi-node runs
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MPI_processes_per_node = 32 ## MPI ranks launched on each node in MPI_hosts
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MPI_processes = 64 ## number of mpi processes used in the simulation
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GPU_Calculation = "no" ## Use GPU or not
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## (prefer "no" in the current version, because the GPU part may have bugs when integrated in this Python interface)
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@@ -5284,6 +5284,41 @@ double Parallel::L2Norm(Patch *Pat, var *vf)
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return tvf;
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}
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void Parallel::L2Norm7(Patch *Pat, var **vf, double *norms)
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{
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int myrank;
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MPI_Comm_rank(MPI_COMM_WORLD, &myrank);
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double tvf[7], dtvf[7];
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int BDW = ghost_width;
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for (int i = 0; i < 7; i++)
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dtvf[i] = 0;
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MyList<Block> *BP = Pat->blb;
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while (BP)
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{
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Block *cg = BP->data;
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if (myrank == cg->rank)
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{
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f_l2normhelper7(cg->shape, cg->X[0], cg->X[1], cg->X[2],
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Pat->bbox[0], Pat->bbox[1], Pat->bbox[2],
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Pat->bbox[3], Pat->bbox[4], Pat->bbox[5],
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cg->fgfs[vf[0]->sgfn], cg->fgfs[vf[1]->sgfn], cg->fgfs[vf[2]->sgfn],
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cg->fgfs[vf[3]->sgfn], cg->fgfs[vf[4]->sgfn], cg->fgfs[vf[5]->sgfn],
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cg->fgfs[vf[6]->sgfn], tvf, BDW);
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for (int i = 0; i < 7; i++)
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dtvf[i] += tvf[i];
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}
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if (BP == Pat->ble)
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break;
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BP = BP->next;
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}
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MPI_Allreduce(dtvf, tvf, 7, MPI_DOUBLE, MPI_SUM, MPI_COMM_WORLD);
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for (int i = 0; i < 7; i++)
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norms[i] = sqrt(tvf[i]);
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}
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double Parallel::L2Norm(Patch *Pat, var *vf, MPI_Comm Comm_here)
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{
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int myrank;
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@@ -5315,6 +5350,41 @@ double Parallel::L2Norm(Patch *Pat, var *vf, MPI_Comm Comm_here)
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return tvf;
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}
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void Parallel::L2Norm7(Patch *Pat, var **vf, double *norms, MPI_Comm Comm_here)
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{
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int myrank;
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MPI_Comm_rank(MPI_COMM_WORLD, &myrank);
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double tvf[7], dtvf[7];
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int BDW = ghost_width;
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for (int i = 0; i < 7; i++)
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dtvf[i] = 0;
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MyList<Block> *BP = Pat->blb;
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while (BP)
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{
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Block *cg = BP->data;
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if (myrank == cg->rank)
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{
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f_l2normhelper7(cg->shape, cg->X[0], cg->X[1], cg->X[2],
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Pat->bbox[0], Pat->bbox[1], Pat->bbox[2],
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Pat->bbox[3], Pat->bbox[4], Pat->bbox[5],
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cg->fgfs[vf[0]->sgfn], cg->fgfs[vf[1]->sgfn], cg->fgfs[vf[2]->sgfn],
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cg->fgfs[vf[3]->sgfn], cg->fgfs[vf[4]->sgfn], cg->fgfs[vf[5]->sgfn],
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cg->fgfs[vf[6]->sgfn], tvf, BDW);
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for (int i = 0; i < 7; i++)
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dtvf[i] += tvf[i];
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}
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if (BP == Pat->ble)
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break;
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BP = BP->next;
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}
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MPI_Allreduce(dtvf, tvf, 7, MPI_DOUBLE, MPI_SUM, Comm_here);
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for (int i = 0; i < 7; i++)
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norms[i] = sqrt(tvf[i]);
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}
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void Parallel::checkgsl(MyList<Parallel::gridseg> *pp, bool first_only)
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{
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int myrank = 0;
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@@ -183,6 +183,7 @@ namespace Parallel
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MyList<Parallel::gridseg> **out_src, MyList<Parallel::gridseg> **out_dst);
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void PeriodicBD(Patch *Pat, MyList<var> *VarList, int Symmetry);
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double L2Norm(Patch *Pat, var *vf);
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void L2Norm7(Patch *Pat, var **vf, double *norms);
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void checkgsl(MyList<Parallel::gridseg> *pp, bool first_only);
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void checkvarl(MyList<var> *pp, bool first_only);
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MyList<Parallel::gridseg> *divide_gsl(MyList<Parallel::gridseg> *p, Patch *Pat);
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@@ -218,6 +219,7 @@ namespace Parallel
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void checkpatchlist(MyList<Patch> *PatL, bool buflog);
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double L2Norm(Patch *Pat, var *vf, MPI_Comm Comm_here);
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void L2Norm7(Patch *Pat, var **vf, double *norms, MPI_Comm Comm_here);
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bool PatList_Interp_Points(MyList<Patch> *PatL, MyList<var> *VarList,
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int NN, double **XX,
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double *Shellf, int Symmetry, MPI_Comm Comm_here);
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@@ -3472,6 +3472,43 @@ double ShellPatch::L2Norm(var *vf)
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return tvf;
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}
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void ShellPatch::L2Norm7(var **vf, double *norms)
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{
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double tvf[7], dtvf[7];
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int BDW = overghost;
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for (int i = 0; i < 7; i++)
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dtvf[i] = 0;
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MyList<ss_patch> *sPp = PatL;
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while (sPp)
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{
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MyList<Block> *Bp = sPp->data->blb;
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while (Bp)
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{
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Block *cg = Bp->data;
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if (myrank == cg->rank)
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{
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f_l2normhelper7(cg->shape, cg->X[0], cg->X[1], cg->X[2],
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sPp->data->bbox[0], sPp->data->bbox[1], sPp->data->bbox[2],
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sPp->data->bbox[3], sPp->data->bbox[4], sPp->data->bbox[5],
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cg->fgfs[vf[0]->sgfn], cg->fgfs[vf[1]->sgfn], cg->fgfs[vf[2]->sgfn],
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cg->fgfs[vf[3]->sgfn], cg->fgfs[vf[4]->sgfn], cg->fgfs[vf[5]->sgfn],
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cg->fgfs[vf[6]->sgfn], tvf, BDW);
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for (int i = 0; i < 7; i++)
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dtvf[i] += tvf[i];
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}
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if (Bp == sPp->data->ble)
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break;
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Bp = Bp->next;
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}
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sPp = sPp->next;
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}
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MPI_Allreduce(dtvf, tvf, 7, MPI_DOUBLE, MPI_SUM, MPI_COMM_WORLD);
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for (int i = 0; i < 7; i++)
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norms[i] = sqrt(tvf[i]);
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}
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// find maximum of abstract value, XX store position for maximum, Shellf store maximum themselvs
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void ShellPatch::Find_Maximum(MyList<var> *VarList, double *XX,
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@@ -198,6 +198,7 @@ public:
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void write_Pablo_file_ss(int *ext, double xmin, double xmax, double ymin, double ymax, double zmin, double zmax,
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char *filename, int sst);
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double L2Norm(var *vf);
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void L2Norm7(var **vf, double *norms);
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void Find_Maximum(MyList<var> *VarList, double *XX, double *Shellf);
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};
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@@ -47,6 +47,233 @@ using namespace std;
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#define BSSN_ENABLE_MEM_USAGE_LOG 0
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#endif
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#ifndef BSSN_FINE_TIMING
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#define BSSN_FINE_TIMING 0
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#endif
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#ifndef BSSN_FINE_TIMING_EVERY
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#define BSSN_FINE_TIMING_EVERY 1
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#endif
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#ifndef BSSN_FINE_TIMING_TOPN
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#define BSSN_FINE_TIMING_TOPN 8
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#endif
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#ifndef BSSN_KERNEL_FINE_TIMING
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#define BSSN_KERNEL_FINE_TIMING 0
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#endif
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#ifndef BSSN_ENABLE_STDIN_ABORT_POLL
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#define BSSN_ENABLE_STDIN_ABORT_POLL 0
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#endif
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#if BSSN_FINE_TIMING
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namespace step_timing
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{
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enum Bucket
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{
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TB_ANALYSIS_PSI4 = 0,
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TB_ANALYSIS_SURFACE,
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TB_ANALYSIS_IO,
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TB_BH_PREDICTOR,
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TB_PREDICTOR_RHS,
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TB_PREDICTOR_SYNC,
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TB_BH_CORRECTOR,
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TB_CORRECTOR_RHS,
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TB_CORRECTOR_SYNC,
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TB_STATE_SWAP,
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TB_RESTRICT_PROLONG,
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TB_CONSTRAINT_OUT,
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TB_DUMP_3D,
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TB_DUMP_2D,
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TB_CHECKPOINT,
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TB_REGRID,
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TB_COUNT
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};
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static double local_bucket_seconds[TB_COUNT];
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static const char *bucket_labels[TB_COUNT] =
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{
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"analysis_psi4",
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"analysis_surface",
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"analysis_io",
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"bh_predictor",
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"predictor_rhs",
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"predictor_sync",
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"bh_corrector",
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"corrector_rhs",
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"corrector_sync",
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"state_swap",
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"restrict_prolong",
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"constraint_out",
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"dump_3d",
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"dump_2d",
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"checkpoint",
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"regrid"
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};
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void reset()
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{
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for (int i = 0; i < TB_COUNT; i++)
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local_bucket_seconds[i] = 0.0;
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}
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void add(Bucket bucket, double seconds)
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{
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local_bucket_seconds[int(bucket)] += seconds;
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}
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void report(int myrank, int nprocs, monitor *TimingMonitor,
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int step_index, double phys_time, double step_wall_seconds)
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{
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double max_bucket_seconds[TB_COUNT];
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double avg_bucket_seconds[TB_COUNT];
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MPI_Reduce(local_bucket_seconds, max_bucket_seconds, TB_COUNT, MPI_DOUBLE, MPI_MAX, 0, MPI_COMM_WORLD);
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MPI_Reduce(local_bucket_seconds, avg_bucket_seconds, TB_COUNT, MPI_DOUBLE, MPI_SUM, 0, MPI_COMM_WORLD);
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if (myrank != 0)
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return;
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for (int i = 0; i < TB_COUNT; i++)
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avg_bucket_seconds[i] /= Mymax(1, nprocs);
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if (TimingMonitor)
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{
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double row[2 + 2 * TB_COUNT];
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row[0] = double(step_index);
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row[1] = step_wall_seconds;
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for (int i = 0; i < TB_COUNT; i++)
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{
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row[2 + i] = max_bucket_seconds[i];
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row[2 + TB_COUNT + i] = avg_bucket_seconds[i];
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}
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TimingMonitor->writefile(phys_time, 2 + 2 * TB_COUNT, row);
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}
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double residual = step_wall_seconds;
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for (int i = 0; i < TB_COUNT; i++)
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residual -= max_bucket_seconds[i];
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if (residual < 0.0)
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residual = 0.0;
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int order[TB_COUNT];
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for (int i = 0; i < TB_COUNT; i++)
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order[i] = i;
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for (int i = 0; i < TB_COUNT - 1; i++)
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for (int j = i + 1; j < TB_COUNT; j++)
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if (max_bucket_seconds[order[j]] > max_bucket_seconds[order[i]])
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{
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int tmp = order[i];
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order[i] = order[j];
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order[j] = tmp;
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}
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ios::fmtflags old_flags = cout.flags();
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streamsize old_precision = cout.precision();
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cout << " Fine timing hot spots (max rank wall estimate):" << endl;
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const int topn = Mymin(BSSN_FINE_TIMING_TOPN, TB_COUNT);
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for (int i = 0; i < topn; i++)
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{
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const int ib = order[i];
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const double frac = (step_wall_seconds > 0.0) ? (100.0 * max_bucket_seconds[ib] / step_wall_seconds) : 0.0;
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cout << " "
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<< setw(20) << left << bucket_labels[ib]
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<< " = " << setw(10) << right << setprecision(6) << max_bucket_seconds[ib]
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<< " s (" << setw(6) << setprecision(4) << frac << "%)" << endl;
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}
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if (residual > 1.0e-6)
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{
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const double frac = (step_wall_seconds > 0.0) ? (100.0 * residual / step_wall_seconds) : 0.0;
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cout << " "
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<< setw(20) << left << "unprofiled_residual"
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<< " = " << setw(10) << right << setprecision(6) << residual
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<< " s (" << setw(6) << setprecision(4) << frac << "%)" << endl;
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}
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cout << endl;
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cout.flags(old_flags);
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cout.precision(old_precision);
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}
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}
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#define STEP_TIMER_DECL(var_name) const double var_name = MPI_Wtime()
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#define STEP_TIMER_ADD(bucket_name, var_name) step_timing::add(step_timing::bucket_name, MPI_Wtime() - (var_name))
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#else
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#define STEP_TIMER_DECL(var_name)
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#define STEP_TIMER_ADD(bucket_name, var_name)
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#endif
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#if BSSN_KERNEL_FINE_TIMING
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namespace rhs_kernel_timing_report
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{
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void report(int myrank, int nprocs, int step_index, double step_wall_seconds)
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{
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const int bucket_count = f_bssn_rhs_kernel_timing_bucket_count();
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const double *local_bucket_seconds = f_bssn_rhs_kernel_timing_local_seconds();
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if (bucket_count <= 0 || !local_bucket_seconds)
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return;
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double *max_bucket_seconds = new double[bucket_count];
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double *avg_bucket_seconds = new double[bucket_count];
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int *order = new int[bucket_count];
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MPI_Reduce((void *)local_bucket_seconds, max_bucket_seconds, bucket_count, MPI_DOUBLE, MPI_MAX, 0, MPI_COMM_WORLD);
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MPI_Reduce((void *)local_bucket_seconds, avg_bucket_seconds, bucket_count, MPI_DOUBLE, MPI_SUM, 0, MPI_COMM_WORLD);
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if (myrank == 0)
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{
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double kernel_total = 0.0;
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for (int i = 0; i < bucket_count; ++i)
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{
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avg_bucket_seconds[i] /= Mymax(1, nprocs);
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order[i] = i;
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kernel_total += max_bucket_seconds[i];
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}
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for (int i = 0; i < bucket_count - 1; ++i)
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for (int j = i + 1; j < bucket_count; ++j)
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if (max_bucket_seconds[order[j]] > max_bucket_seconds[order[i]])
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{
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int tmp = order[i];
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order[i] = order[j];
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order[j] = tmp;
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}
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ios::fmtflags old_flags = cout.flags();
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streamsize old_precision = cout.precision();
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const double kernel_frac = (step_wall_seconds > 0.0) ? (100.0 * kernel_total / step_wall_seconds) : 0.0;
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cout << " RHS kernel split (max-rank accumulated over step " << step_index << "): total "
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<< setprecision(6) << kernel_total << " s (" << setprecision(4)
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<< kernel_frac << "% of coarse step)" << endl;
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const int topn = Mymin(BSSN_FINE_TIMING_TOPN, bucket_count);
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for (int i = 0; i < topn; ++i)
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{
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const int ib = order[i];
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const double frac = (kernel_total > 0.0) ? (100.0 * max_bucket_seconds[ib] / kernel_total) : 0.0;
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cout << " "
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<< setw(20) << left << f_bssn_rhs_kernel_timing_label(ib)
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<< " = " << setw(10) << right << setprecision(6) << max_bucket_seconds[ib]
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<< " s (" << setw(6) << setprecision(4) << frac << "% of kernel)" << endl;
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}
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cout << endl;
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cout.flags(old_flags);
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cout.precision(old_precision);
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}
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delete[] max_bucket_seconds;
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delete[] avg_bucket_seconds;
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delete[] order;
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}
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}
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#endif
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//================================================================================================
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// define bssn_class
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@@ -65,6 +292,7 @@ bssn_class::bssn_class(double Couranti, double StartTimei, double TotalTimei,
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xc(0), yc(0), zc(0), xr(0), yr(0), zr(0), trigger(0), dTT(0), dumpid(0),
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#endif
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a_lev(a_levi), maxl(maxli), decn(decni), maxrex(maxrexi), drex(drexi),
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ConstraintRefreshLevels(0),
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CheckPoint(0)
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// CheckPoint(0)
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{
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@@ -107,6 +335,24 @@ bssn_class::bssn_class(double Couranti, double StartTimei, double TotalTimei,
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a_stream.str("");
|
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a_stream << setw(15) << "# time Ham Px Py Pz Gx Gy Gz";
|
||||
ConVMonitor = new monitor("bssn_constraint.dat", myrank, a_stream.str());
|
||||
|
||||
#if BSSN_FINE_TIMING
|
||||
a_stream.clear();
|
||||
a_stream.str("");
|
||||
a_stream << setw(8) << "# step";
|
||||
a_stream << setw(14) << "wall";
|
||||
for (int ib = 0; ib < step_timing::TB_COUNT; ib++)
|
||||
a_stream << setw(18) << step_timing::bucket_labels[ib];
|
||||
for (int ib = 0; ib < step_timing::TB_COUNT; ib++)
|
||||
{
|
||||
char str_avg[64];
|
||||
sprintf(str_avg, "avg_%s", step_timing::bucket_labels[ib]);
|
||||
a_stream << setw(18) << str_avg;
|
||||
}
|
||||
TimingMonitor = new monitor("bssn_step_timing.dat", myrank, a_stream.str());
|
||||
#else
|
||||
TimingMonitor = 0;
|
||||
#endif
|
||||
}
|
||||
// setup sphere integration engine
|
||||
Waveshell = new surface_integral(Symmetry);
|
||||
@@ -702,6 +948,9 @@ void bssn_class::Initialize()
|
||||
}
|
||||
}
|
||||
GH = new cgh(0, ngfs, Symmetry, pname, checkrun, ErrorMonitor);
|
||||
ConstraintRefreshLevels = new int[GH->levels];
|
||||
for (int il = 0; il < GH->levels; il++)
|
||||
ConstraintRefreshLevels[il] = 0;
|
||||
if (checkrun)
|
||||
CheckPoint->readcheck_cgh(PhysTime, GH, myrank, nprocs, Symmetry);
|
||||
else
|
||||
@@ -791,6 +1040,8 @@ bssn_class::~bssn_class()
|
||||
DumpList->clearList();
|
||||
ConstraintList->clearList();
|
||||
|
||||
delete[] ConstraintRefreshLevels;
|
||||
|
||||
delete phio;
|
||||
delete trKo;
|
||||
delete gxxo;
|
||||
@@ -1050,6 +1301,7 @@ bssn_class::~bssn_class()
|
||||
delete BHMonitor;
|
||||
delete MAPMonitor;
|
||||
delete ConVMonitor;
|
||||
delete TimingMonitor;
|
||||
delete Waveshell;
|
||||
|
||||
delete CheckPoint;
|
||||
@@ -2036,7 +2288,7 @@ void bssn_class::Read_Ansorg()
|
||||
|
||||
void bssn_class::Evolve(int Steps)
|
||||
{
|
||||
double prev_clock = 0.0, curr_clock = 0.0;
|
||||
clock_t prev_clock, curr_clock;
|
||||
double LastDump = 0.0, LastCheck = 0.0, Last2dDump = 0.0;
|
||||
LastAnas = 0;
|
||||
#if 0
|
||||
@@ -2147,12 +2399,21 @@ void bssn_class::Evolve(int Steps)
|
||||
|
||||
for (int ncount = 1; ncount < Steps + 1; ncount++)
|
||||
{
|
||||
#if BSSN_FINE_TIMING
|
||||
step_timing::reset();
|
||||
#endif
|
||||
#if BSSN_KERNEL_FINE_TIMING
|
||||
f_bssn_rhs_kernel_timing_reset();
|
||||
#endif
|
||||
#if (BSSN_FINE_TIMING || BSSN_KERNEL_FINE_TIMING)
|
||||
const double step_wall_start = MPI_Wtime();
|
||||
#endif
|
||||
// special for large mass ratio consideration
|
||||
// if(fabs(Porg0[0][0]-Porg0[1][0])+fabs(Porg0[0][1]-Porg0[1][1])+fabs(Porg0[0][2]-Porg0[1][2])<1e-6)
|
||||
// { GH->levels=GH->movls; }
|
||||
|
||||
if (myrank == 0)
|
||||
curr_clock = MPI_Wtime();
|
||||
curr_clock = clock();
|
||||
#if (PSTR == 0)
|
||||
RecursiveStep(0);
|
||||
#elif (PSTR == 1 || PSTR == 2 || PSTR == 3)
|
||||
@@ -2173,6 +2434,7 @@ void bssn_class::Evolve(int Steps)
|
||||
// When LastDump >= DumpTime, output corresponding binary data
|
||||
if (LastDump >= DumpTime)
|
||||
{
|
||||
STEP_TIMER_DECL(timer_dump3d);
|
||||
// misc::tillherecheck("before Dump_Data");
|
||||
|
||||
for (int lev = 0; lev < GH->levels; lev++)
|
||||
@@ -2180,6 +2442,7 @@ void bssn_class::Evolve(int Steps)
|
||||
#ifdef WithShell
|
||||
SH->Dump_Data(DumpList, 0, PhysTime, dT_mon);
|
||||
#endif
|
||||
STEP_TIMER_ADD(TB_DUMP_3D, timer_dump3d);
|
||||
|
||||
LastDump = 0;
|
||||
|
||||
@@ -2192,10 +2455,12 @@ void bssn_class::Evolve(int Steps)
|
||||
// When Last2dDump >= d2DumpTime, output corresponding 2D data
|
||||
if (Last2dDump >= d2DumpTime)
|
||||
{
|
||||
STEP_TIMER_DECL(timer_dump2d);
|
||||
// misc::tillherecheck("before 2dDump_Data");
|
||||
|
||||
for (int lev = 0; lev < GH->levels; lev++)
|
||||
Parallel::d2Dump_Data(GH->PatL[lev], DumpList, 0, PhysTime, dT_mon);
|
||||
STEP_TIMER_ADD(TB_DUMP_2D, timer_dump2d);
|
||||
|
||||
Last2dDump = 0;
|
||||
|
||||
@@ -2208,10 +2473,10 @@ void bssn_class::Evolve(int Steps)
|
||||
if (myrank == 0)
|
||||
{
|
||||
prev_clock = curr_clock;
|
||||
curr_clock = MPI_Wtime();
|
||||
curr_clock = clock();
|
||||
cout << endl;
|
||||
cout << " Timestep # " << ncount << ": integrating to time: " << PhysTime << " "
|
||||
<< " Computer used " << (curr_clock - prev_clock)
|
||||
<< " Computer used " << (double)(curr_clock - prev_clock) / ((double)CLOCKS_PER_SEC)
|
||||
<< " seconds! " << endl;
|
||||
// cout << endl;
|
||||
}
|
||||
@@ -2220,10 +2485,12 @@ void bssn_class::Evolve(int Steps)
|
||||
break;
|
||||
|
||||
#if (REGLEV == 1)
|
||||
STEP_TIMER_DECL(timer_regrid);
|
||||
GH->Regrid(Symmetry, BH_num, Porgbr, Porg0,
|
||||
SynchList_cor, OldStateList, StateList, SynchList_pre,
|
||||
fgt(PhysTime - dT_mon, StartTime, dT_mon / 2), ErrorMonitor);
|
||||
for (int il = 0; il < GH->levels; il++) { sync_cache_pre[il].invalidate(); sync_cache_cor[il].invalidate(); sync_cache_rp_coarse[il].invalidate(); sync_cache_rp_fine[il].invalidate(); sync_cache_restrict[il].invalidate(); sync_cache_outbd[il].invalidate(); }
|
||||
STEP_TIMER_ADD(TB_REGRID, timer_regrid);
|
||||
#endif
|
||||
|
||||
#if (REGLEV == 0 && (PSTR == 1 || PSTR == 2))
|
||||
@@ -2263,10 +2530,13 @@ void bssn_class::Evolve(int Steps)
|
||||
<< endl;
|
||||
}
|
||||
cout << endl;
|
||||
#if BSSN_ENABLE_STDIN_ABORT_POLL
|
||||
cout << " If you think the physical evolution time is enough for this simulation, please input 'stop' in the terminal to stop the MPI processes in the next evolution step ! " << endl;
|
||||
#endif
|
||||
// cout << endl;
|
||||
}
|
||||
|
||||
#if BSSN_ENABLE_STDIN_ABORT_POLL
|
||||
////////////////////////////////////////////////////////////
|
||||
// If an "abort" command is detected on stdin, terminate MPI processes
|
||||
////////////////////////////////////////////////////////////
|
||||
@@ -2294,10 +2564,12 @@ void bssn_class::Evolve(int Steps)
|
||||
}
|
||||
|
||||
////////////////////////////////////////////////////////////
|
||||
#endif
|
||||
|
||||
// When LastCheck >= CheckTime, perform runtime checks and output status data
|
||||
if (LastCheck >= CheckTime)
|
||||
{
|
||||
STEP_TIMER_DECL(timer_checkpoint);
|
||||
LastCheck = 0;
|
||||
|
||||
CheckPoint->write_Black_Hole_position(BH_num_input, BH_num, Porg0, Porgbr, Mass);
|
||||
@@ -2306,7 +2578,20 @@ void bssn_class::Evolve(int Steps)
|
||||
CheckPoint->writecheck_sh(PhysTime, SH);
|
||||
#endif
|
||||
CheckPoint->write_bssn(LastDump, Last2dDump, LastAnas);
|
||||
STEP_TIMER_ADD(TB_CHECKPOINT, timer_checkpoint);
|
||||
}
|
||||
|
||||
#if (BSSN_FINE_TIMING || BSSN_KERNEL_FINE_TIMING)
|
||||
const double step_wall_seconds = MPI_Wtime() - step_wall_start;
|
||||
#endif
|
||||
#if BSSN_FINE_TIMING
|
||||
if (ncount % BSSN_FINE_TIMING_EVERY == 0)
|
||||
step_timing::report(myrank, nprocs, TimingMonitor, ncount, PhysTime, step_wall_seconds);
|
||||
#endif
|
||||
#if BSSN_KERNEL_FINE_TIMING
|
||||
if (ncount % BSSN_FINE_TIMING_EVERY == 0)
|
||||
rhs_kernel_timing_report::report(myrank, nprocs, ncount, step_wall_seconds);
|
||||
#endif
|
||||
}
|
||||
/*
|
||||
#ifdef With_AHF
|
||||
@@ -2438,10 +2723,16 @@ void bssn_class::RecursiveStep(int lev)
|
||||
#endif
|
||||
|
||||
#if (REGLEV == 0)
|
||||
STEP_TIMER_DECL(timer_regrid_onelevel);
|
||||
if (GH->Regrid_Onelevel(lev, Symmetry, BH_num, Porgbr, Porg0,
|
||||
SynchList_cor, OldStateList, StateList, SynchList_pre,
|
||||
fgt(PhysTime - dT_lev, StartTime, dT_lev / 2), ErrorMonitor))
|
||||
{
|
||||
if (ConstraintRefreshLevels)
|
||||
ConstraintRefreshLevels[lev] = 1;
|
||||
for (int il = 0; il < GH->levels; il++) { sync_cache_pre[il].invalidate(); sync_cache_cor[il].invalidate(); sync_cache_rp_coarse[il].invalidate(); sync_cache_rp_fine[il].invalidate(); sync_cache_restrict[il].invalidate(); sync_cache_outbd[il].invalidate(); }
|
||||
}
|
||||
STEP_TIMER_ADD(TB_REGRID, timer_regrid_onelevel);
|
||||
#endif
|
||||
}
|
||||
|
||||
@@ -3034,6 +3325,7 @@ void bssn_class::Step(int lev, int YN)
|
||||
|
||||
// new code 2013-2-15, zjcao
|
||||
#if (MAPBH == 1)
|
||||
STEP_TIMER_DECL(timer_bh_predictor);
|
||||
// for black hole position
|
||||
if (BH_num > 0 && lev == GH->levels - 1)
|
||||
{
|
||||
@@ -3064,6 +3356,7 @@ void bssn_class::Step(int lev, int YN)
|
||||
}
|
||||
}
|
||||
}
|
||||
STEP_TIMER_ADD(TB_BH_PREDICTOR, timer_bh_predictor);
|
||||
|
||||
// data analysis part
|
||||
// Warning NOTE: the variables1 are used as temp storege room
|
||||
@@ -3086,6 +3379,7 @@ void bssn_class::Step(int lev, int YN)
|
||||
int ERROR = 0;
|
||||
|
||||
MyList<ss_patch> *sPp;
|
||||
STEP_TIMER_DECL(timer_predictor_rhs);
|
||||
// Predictor
|
||||
MyList<Patch> *Pp = GH->PatL[lev];
|
||||
while (Pp)
|
||||
@@ -3361,6 +3655,9 @@ void bssn_class::Step(int lev, int YN)
|
||||
}
|
||||
#endif
|
||||
|
||||
STEP_TIMER_ADD(TB_PREDICTOR_RHS, timer_predictor_rhs);
|
||||
|
||||
STEP_TIMER_DECL(timer_predictor_sync);
|
||||
Parallel::AsyncSyncState async_pre;
|
||||
Parallel::Sync_start(GH->PatL[lev], SynchList_pre, Symmetry, sync_cache_pre[lev], async_pre);
|
||||
|
||||
@@ -3398,6 +3695,7 @@ void bssn_class::Step(int lev, int YN)
|
||||
}
|
||||
}
|
||||
#endif
|
||||
STEP_TIMER_ADD(TB_PREDICTOR_SYNC, timer_predictor_sync);
|
||||
|
||||
#if (MAPBH == 0)
|
||||
// for black hole position
|
||||
@@ -3442,6 +3740,7 @@ void bssn_class::Step(int lev, int YN)
|
||||
// corrector
|
||||
for (iter_count = 1; iter_count < 4; iter_count++)
|
||||
{
|
||||
STEP_TIMER_DECL(timer_corrector_rhs);
|
||||
// for RK4: t0, t0+dt/2, t0+dt/2, t0+dt;
|
||||
if (iter_count == 1 || iter_count == 3)
|
||||
TRK4 += dT_lev / 2;
|
||||
@@ -3721,6 +4020,9 @@ void bssn_class::Step(int lev, int YN)
|
||||
}
|
||||
#endif
|
||||
|
||||
STEP_TIMER_ADD(TB_CORRECTOR_RHS, timer_corrector_rhs);
|
||||
|
||||
STEP_TIMER_DECL(timer_corrector_sync);
|
||||
Parallel::AsyncSyncState async_cor;
|
||||
Parallel::Sync_start(GH->PatL[lev], SynchList_cor, Symmetry, sync_cache_cor[lev], async_cor);
|
||||
|
||||
@@ -3760,8 +4062,10 @@ void bssn_class::Step(int lev, int YN)
|
||||
}
|
||||
}
|
||||
#endif
|
||||
STEP_TIMER_ADD(TB_CORRECTOR_SYNC, timer_corrector_sync);
|
||||
|
||||
#if (MAPBH == 0)
|
||||
STEP_TIMER_DECL(timer_bh_corrector);
|
||||
// for black hole position
|
||||
if (BH_num > 0 && lev == GH->levels - 1)
|
||||
{
|
||||
@@ -3794,11 +4098,13 @@ void bssn_class::Step(int lev, int YN)
|
||||
}
|
||||
}
|
||||
}
|
||||
STEP_TIMER_ADD(TB_BH_CORRECTOR, timer_bh_corrector);
|
||||
#endif
|
||||
|
||||
// swap time level
|
||||
if (iter_count < 3)
|
||||
{
|
||||
STEP_TIMER_DECL(timer_state_swap);
|
||||
Pp = GH->PatL[lev];
|
||||
while (Pp)
|
||||
{
|
||||
@@ -3845,9 +4151,11 @@ void bssn_class::Step(int lev, int YN)
|
||||
}
|
||||
}
|
||||
#endif
|
||||
STEP_TIMER_ADD(TB_STATE_SWAP, timer_state_swap);
|
||||
}
|
||||
}
|
||||
#if (RPS == 0)
|
||||
STEP_TIMER_DECL(timer_restrict_prolong);
|
||||
// mesh refinement boundary part
|
||||
RestrictProlong(lev, YN, BB);
|
||||
|
||||
@@ -3868,6 +4176,7 @@ void bssn_class::Step(int lev, int YN)
|
||||
}
|
||||
#endif
|
||||
|
||||
STEP_TIMER_ADD(TB_RESTRICT_PROLONG, timer_restrict_prolong);
|
||||
#endif
|
||||
// note the data structure before update
|
||||
// SynchList_cor 1 -----------
|
||||
@@ -3876,6 +4185,7 @@ void bssn_class::Step(int lev, int YN)
|
||||
//
|
||||
// OldStateList old -----------
|
||||
// update
|
||||
STEP_TIMER_DECL(timer_state_commit);
|
||||
Pp = GH->PatL[lev];
|
||||
while (Pp)
|
||||
{
|
||||
@@ -3932,6 +4242,7 @@ void bssn_class::Step(int lev, int YN)
|
||||
Porg0[ithBH][2] = Porg1[ithBH][2];
|
||||
}
|
||||
}
|
||||
STEP_TIMER_ADD(TB_STATE_SWAP, timer_state_commit);
|
||||
}
|
||||
|
||||
//================================================================================================
|
||||
@@ -4258,7 +4569,9 @@ void bssn_class::Step(int lev, int YN)
|
||||
}
|
||||
}
|
||||
#endif
|
||||
STEP_TIMER_ADD(TB_PREDICTOR_SYNC, timer_predictor_sync);
|
||||
|
||||
STEP_TIMER_DECL(timer_bh_predictor);
|
||||
// for black hole position
|
||||
if (BH_num > 0 && lev == GH->levels - 1)
|
||||
{
|
||||
@@ -4297,6 +4610,7 @@ void bssn_class::Step(int lev, int YN)
|
||||
{
|
||||
AnalysisStuff(lev, dT_lev);
|
||||
}
|
||||
STEP_TIMER_ADD(TB_BH_PREDICTOR, timer_bh_predictor);
|
||||
// corrector
|
||||
for (iter_count = 1; iter_count < 3; iter_count++)
|
||||
{
|
||||
@@ -5767,6 +6081,7 @@ void bssn_class::RestrictProlong(int lev, int YN, bool BB,
|
||||
//
|
||||
// SynchList_cor old -----------
|
||||
{
|
||||
STEP_TIMER_DECL(timer_restrict_prolong);
|
||||
#if (PSTR == 1 || PSTR == 2)
|
||||
// stringstream a_stream;
|
||||
// a_stream.setf(ios::left);
|
||||
@@ -5909,6 +6224,7 @@ void bssn_class::RestrictProlong(int lev, int YN, bool BB,
|
||||
// misc::tillherecheck(GH->Commlev[GH->mylev],GH->start_rank[GH->mylev],a_stream.str());
|
||||
#endif
|
||||
}
|
||||
STEP_TIMER_ADD(TB_RESTRICT_PROLONG, timer_restrict_prolong);
|
||||
}
|
||||
|
||||
//================================================================================================
|
||||
@@ -5928,6 +6244,7 @@ void bssn_class::RestrictProlong_aux(int lev, int YN, bool BB,
|
||||
//
|
||||
// SynchList_cor old -----------
|
||||
{
|
||||
STEP_TIMER_DECL(timer_restrict_prolong);
|
||||
// misc::tillherecheck(GH->Commlev[lev],GH->start_rank[lev],"starting RestrictProlong_aux");
|
||||
|
||||
if (lev >= GH->levels - 1)
|
||||
@@ -5996,6 +6313,7 @@ void bssn_class::RestrictProlong_aux(int lev, int YN, bool BB,
|
||||
|
||||
Parallel::Sync_cached(GH->PatL[lev], SL, Symmetry, sync_cache_rp_fine[lev]);
|
||||
}
|
||||
STEP_TIMER_ADD(TB_RESTRICT_PROLONG, timer_restrict_prolong);
|
||||
}
|
||||
|
||||
//================================================================================================
|
||||
@@ -6006,6 +6324,7 @@ void bssn_class::RestrictProlong_aux(int lev, int YN, bool BB,
|
||||
|
||||
void bssn_class::RestrictProlong(int lev, int YN, bool BB)
|
||||
{
|
||||
STEP_TIMER_DECL(timer_restrict_prolong);
|
||||
double dT_lev = dT * pow(0.5, Mymax(lev, trfls));
|
||||
// we assume for fine
|
||||
// SynchList_cor 1 -----------
|
||||
@@ -6085,6 +6404,7 @@ void bssn_class::RestrictProlong(int lev, int YN, bool BB)
|
||||
|
||||
Parallel::Sync_cached(GH->PatL[lev], SynchList_cor, Symmetry, sync_cache_rp_fine[lev]);
|
||||
}
|
||||
STEP_TIMER_ADD(TB_RESTRICT_PROLONG, timer_restrict_prolong);
|
||||
}
|
||||
|
||||
//================================================================================================
|
||||
@@ -6835,18 +7155,15 @@ void bssn_class::compute_Porg_rhs(double **BH_PS,double **BH_RHS,var *forx,var *
|
||||
|
||||
void bssn_class::compute_Porg_rhs(double **BH_PS, double **BH_RHS, var *forx, var *fory, var *forz, int ilev)
|
||||
{
|
||||
const int InList = 3;
|
||||
MyList<var> DG_List_x(forx);
|
||||
MyList<var> DG_List_y(fory);
|
||||
MyList<var> DG_List_z(forz);
|
||||
DG_List_x.next = &DG_List_y;
|
||||
DG_List_y.next = &DG_List_z;
|
||||
|
||||
MyList<var> *DG_List = new MyList<var>(forx);
|
||||
DG_List->insert(fory);
|
||||
DG_List->insert(forz);
|
||||
|
||||
double *x1, *y1, *z1;
|
||||
double *shellf;
|
||||
shellf = new double[3];
|
||||
double *pox[3];
|
||||
for (int i = 0; i < 3; i++)
|
||||
pox[i] = new double[1];
|
||||
double shellf[3];
|
||||
double pox_buf[3][1];
|
||||
double *pox[3] = {pox_buf[0], pox_buf[1], pox_buf[2]};
|
||||
|
||||
for (int n = 0; n < BH_num; n++)
|
||||
{
|
||||
@@ -6857,9 +7174,9 @@ void bssn_class::compute_Porg_rhs(double **BH_PS, double **BH_RHS, var *forx, va
|
||||
int lev = ilev;
|
||||
|
||||
#if (PSTR == 0)
|
||||
while (!Parallel::PatList_Interp_Points(GH->PatL[lev], DG_List, 1, pox, shellf, Symmetry))
|
||||
while (!Parallel::PatList_Interp_Points(GH->PatL[lev], &DG_List_x, 1, pox, shellf, Symmetry))
|
||||
#elif (PSTR == 1 || PSTR == 2 || PSTR == 3)
|
||||
while (!Parallel::PatList_Interp_Points(GH->PatL[lev], DG_List, 1, pox, shellf, Symmetry, GH->Commlev[lev]))
|
||||
while (!Parallel::PatList_Interp_Points(GH->PatL[lev], &DG_List_x, 1, pox, shellf, Symmetry, GH->Commlev[lev]))
|
||||
#endif
|
||||
{
|
||||
lev--;
|
||||
@@ -6868,7 +7185,7 @@ void bssn_class::compute_Porg_rhs(double **BH_PS, double **BH_RHS, var *forx, va
|
||||
ErrorMonitor->outfile << "fail to find black holes at t = " << PhysTime << endl;
|
||||
for (n = 0; n < BH_num; n++)
|
||||
ErrorMonitor->outfile << "(x,y,z) = ("
|
||||
<< pox[0][n] << "," << pox[1][n] << "," << pox[2][n]
|
||||
<< BH_PS[n][0] << "," << BH_PS[n][1] << "," << BH_PS[n][2]
|
||||
<< ")" << endl;
|
||||
break;
|
||||
}
|
||||
@@ -6881,11 +7198,6 @@ void bssn_class::compute_Porg_rhs(double **BH_PS, double **BH_RHS, var *forx, va
|
||||
BH_RHS[n][2] = -shellf[2];
|
||||
}
|
||||
}
|
||||
|
||||
DG_List->clearList();
|
||||
delete[] shellf;
|
||||
for (int i = 0; i < 3; i++)
|
||||
delete[] pox[i];
|
||||
}
|
||||
#endif
|
||||
|
||||
@@ -7108,6 +7420,10 @@ void bssn_class::AnalysisStuff(int lev, double dT_lev)
|
||||
IP = new double[NN];
|
||||
RoutMAP = new double[7];
|
||||
double Rex = maxrex;
|
||||
bool patch_mass_prepared = false;
|
||||
#ifdef WithShell
|
||||
bool shell_mass_prepared = false;
|
||||
#endif
|
||||
for (int i = 0; i < decn; i++)
|
||||
{
|
||||
#ifdef Point_Psi4
|
||||
@@ -7135,7 +7451,8 @@ void bssn_class::AnalysisStuff(int lev, double dT_lev)
|
||||
gxx0, gxy0, gxz0, gyy0, gyz0, gzz0,
|
||||
Axx0, Axy0, Axz0, Ayy0, Ayz0, Azz0,
|
||||
Gmx0, Gmy0, Gmz0, Sfx1, Sfy1, Sfz1, // here we can not touch rhs variables, but 1 variables
|
||||
RoutMAP, ErrorMonitor);
|
||||
RoutMAP, ErrorMonitor, !patch_mass_prepared);
|
||||
patch_mass_prepared = true;
|
||||
}
|
||||
else
|
||||
{
|
||||
@@ -7143,44 +7460,52 @@ void bssn_class::AnalysisStuff(int lev, double dT_lev)
|
||||
gxx0, gxy0, gxz0, gyy0, gyz0, gzz0,
|
||||
Axx0, Axy0, Axz0, Ayy0, Ayz0, Azz0,
|
||||
Gmx0, Gmy0, Gmz0, Sfx1, Sfy1, Sfz1, // here we can not touch rhs variables, but 1 variables
|
||||
RoutMAP, ErrorMonitor);
|
||||
RoutMAP, ErrorMonitor, !shell_mass_prepared);
|
||||
shell_mass_prepared = true;
|
||||
}
|
||||
#else
|
||||
Waveshell->surf_MassPAng(Rex, lev, GH, phi0, trK0,
|
||||
gxx0, gxy0, gxz0, gyy0, gyz0, gzz0,
|
||||
Axx0, Axy0, Axz0, Ayy0, Ayz0, Azz0,
|
||||
Gmx0, Gmy0, Gmz0, Sfx1, Sfy1, Sfz1, // here we can not touch rhs variables, but 1 variables
|
||||
RoutMAP, ErrorMonitor);
|
||||
RoutMAP, ErrorMonitor, !patch_mass_prepared);
|
||||
patch_mass_prepared = true;
|
||||
#endif
|
||||
#else
|
||||
// misc::tillherecheck(GH->Commlev[lev],GH->start_rank[lev],"before surface integral");
|
||||
#ifdef WithShell
|
||||
if (lev > 0 || Rex < GH->bbox[0][0][3])
|
||||
{
|
||||
Waveshell->surf_Wave(Rex, lev, GH, Rpsi4, Ipsi4, 2, maxl, NN, RP, IP, ErrorMonitor);
|
||||
Waveshell->surf_MassPAng(Rex, lev, GH, phi0, trK0,
|
||||
gxx0, gxy0, gxz0, gyy0, gyz0, gzz0,
|
||||
Axx0, Axy0, Axz0, Ayy0, Ayz0, Azz0,
|
||||
Gmx0, Gmy0, Gmz0, Sfx1, Sfy1, Sfz1, // here we can not touch rhs variables, but 1 variables
|
||||
RoutMAP, ErrorMonitor);
|
||||
Waveshell->surf_WaveMassPAng(Rex, lev, GH,
|
||||
Rpsi4, Ipsi4, 2, maxl, NN, RP, IP,
|
||||
phi0, trK0,
|
||||
gxx0, gxy0, gxz0, gyy0, gyz0, gzz0,
|
||||
Axx0, Axy0, Axz0, Ayy0, Ayz0, Azz0,
|
||||
Gmx0, Gmy0, Gmz0, Sfx1, Sfy1, Sfz1,
|
||||
RoutMAP, ErrorMonitor, !patch_mass_prepared);
|
||||
patch_mass_prepared = true;
|
||||
}
|
||||
else
|
||||
{
|
||||
Waveshell->surf_Wave(Rex, lev, SH, Rpsi4, Ipsi4, 2, maxl, NN, RP, IP, ErrorMonitor);
|
||||
Waveshell->surf_MassPAng(Rex, lev, SH, phi0, trK0,
|
||||
gxx0, gxy0, gxz0, gyy0, gyz0, gzz0,
|
||||
Axx0, Axy0, Axz0, Ayy0, Ayz0, Azz0,
|
||||
Gmx0, Gmy0, Gmz0, Sfx1, Sfy1, Sfz1, // here we can not touch rhs variables, but 1 variables
|
||||
RoutMAP, ErrorMonitor);
|
||||
Waveshell->surf_WaveMassPAng(Rex, lev, SH,
|
||||
Rpsi4, Ipsi4, 2, maxl, NN, RP, IP,
|
||||
phi0, trK0,
|
||||
gxx0, gxy0, gxz0, gyy0, gyz0, gzz0,
|
||||
Axx0, Axy0, Axz0, Ayy0, Ayz0, Azz0,
|
||||
Gmx0, Gmy0, Gmz0, Sfx1, Sfy1, Sfz1,
|
||||
RoutMAP, ErrorMonitor, !shell_mass_prepared);
|
||||
shell_mass_prepared = true;
|
||||
}
|
||||
#else
|
||||
#if (PSTR == 0)
|
||||
Waveshell->surf_Wave(Rex, lev, GH, Rpsi4, Ipsi4, 2, maxl, NN, RP, IP, ErrorMonitor);
|
||||
Waveshell->surf_MassPAng(Rex, lev, GH, phi0, trK0,
|
||||
gxx0, gxy0, gxz0, gyy0, gyz0, gzz0,
|
||||
Axx0, Axy0, Axz0, Ayy0, Ayz0, Azz0,
|
||||
Gmx0, Gmy0, Gmz0, Sfx1, Sfy1, Sfz1, // here we can not touch rhs variables, but 1 variables
|
||||
RoutMAP, ErrorMonitor);
|
||||
Waveshell->surf_WaveMassPAng(Rex, lev, GH,
|
||||
Rpsi4, Ipsi4, 2, maxl, NN, RP, IP,
|
||||
phi0, trK0,
|
||||
gxx0, gxy0, gxz0, gyy0, gyz0, gzz0,
|
||||
Axx0, Axy0, Axz0, Ayy0, Ayz0, Azz0,
|
||||
Gmx0, Gmy0, Gmz0, Sfx1, Sfy1, Sfz1,
|
||||
RoutMAP, ErrorMonitor, !patch_mass_prepared);
|
||||
patch_mass_prepared = true;
|
||||
#elif (PSTR == 1 || PSTR == 2)
|
||||
Waveshell->surf_Wave(Rex, lev, GH, Rpsi4, Ipsi4, 2, maxl, NN, RP, IP, ErrorMonitor, GH->Commlev[lev]);
|
||||
// misc::tillherecheck(GH->Commlev[lev],GH->start_rank[lev],"after surf_Wave");
|
||||
@@ -7188,7 +7513,8 @@ void bssn_class::AnalysisStuff(int lev, double dT_lev)
|
||||
gxx0, gxy0, gxz0, gyy0, gyz0, gzz0,
|
||||
Axx0, Axy0, Axz0, Ayy0, Ayz0, Azz0,
|
||||
Gmx0, Gmy0, Gmz0, Sfx1, Sfy1, Sfz1, // here we can not touch rhs variables, but 1 variables
|
||||
RoutMAP, ErrorMonitor, GH->Commlev[lev]);
|
||||
RoutMAP, ErrorMonitor, GH->Commlev[lev], !patch_mass_prepared);
|
||||
patch_mass_prepared = true;
|
||||
#endif
|
||||
#endif
|
||||
// misc::tillherecheck(GH->Commlev[lev],GH->start_rank[lev],"end surface integral");
|
||||
@@ -7261,7 +7587,7 @@ void bssn_class::Constraint_Out()
|
||||
for (int lev = 0; lev < GH->levels; lev++)
|
||||
{
|
||||
// make sure the data consistent for higher levels
|
||||
if (lev > 0) // if the constrait quantities can be reused from the step rhs calculation
|
||||
if (lev > 0 && ConstraintRefreshLevels && ConstraintRefreshLevels[lev]) // only refresh levels whose grid layout changed after evolution
|
||||
{
|
||||
double TRK4 = PhysTime;
|
||||
double ndeps = numepsb;
|
||||
@@ -7415,35 +7741,18 @@ void bssn_class::Constraint_Out()
|
||||
#if (PSTR == 1 || PSTR == 2)
|
||||
double ConV_h[7];
|
||||
#endif
|
||||
var *ConstraintVars[7] = {Cons_Ham, Cons_Px, Cons_Py, Cons_Pz, Cons_Gx, Cons_Gy, Cons_Gz};
|
||||
|
||||
#ifdef WithShell
|
||||
ConV[0] = SH->L2Norm(Cons_Ham);
|
||||
ConV[1] = SH->L2Norm(Cons_Px);
|
||||
ConV[2] = SH->L2Norm(Cons_Py);
|
||||
ConV[3] = SH->L2Norm(Cons_Pz);
|
||||
ConV[4] = SH->L2Norm(Cons_Gx);
|
||||
ConV[5] = SH->L2Norm(Cons_Gy);
|
||||
ConV[6] = SH->L2Norm(Cons_Gz);
|
||||
SH->L2Norm7(ConstraintVars, ConV);
|
||||
ConVMonitor->writefile(PhysTime, 7, ConV);
|
||||
#endif
|
||||
for (int levi = 0; levi < GH->levels; levi++)
|
||||
{
|
||||
#if (PSTR == 0)
|
||||
ConV[0] = Parallel::L2Norm(GH->PatL[levi]->data, Cons_Ham);
|
||||
ConV[1] = Parallel::L2Norm(GH->PatL[levi]->data, Cons_Px);
|
||||
ConV[2] = Parallel::L2Norm(GH->PatL[levi]->data, Cons_Py);
|
||||
ConV[3] = Parallel::L2Norm(GH->PatL[levi]->data, Cons_Pz);
|
||||
ConV[4] = Parallel::L2Norm(GH->PatL[levi]->data, Cons_Gx);
|
||||
ConV[5] = Parallel::L2Norm(GH->PatL[levi]->data, Cons_Gy);
|
||||
ConV[6] = Parallel::L2Norm(GH->PatL[levi]->data, Cons_Gz);
|
||||
Parallel::L2Norm7(GH->PatL[levi]->data, ConstraintVars, ConV);
|
||||
#elif (PSTR == 1 || PSTR == 2)
|
||||
ConV[0] = Parallel::L2Norm(GH->PatL[levi]->data, Cons_Ham, GH->Commlev[levi]);
|
||||
ConV[1] = Parallel::L2Norm(GH->PatL[levi]->data, Cons_Px, GH->Commlev[levi]);
|
||||
ConV[2] = Parallel::L2Norm(GH->PatL[levi]->data, Cons_Py, GH->Commlev[levi]);
|
||||
ConV[3] = Parallel::L2Norm(GH->PatL[levi]->data, Cons_Pz, GH->Commlev[levi]);
|
||||
ConV[4] = Parallel::L2Norm(GH->PatL[levi]->data, Cons_Gx, GH->Commlev[levi]);
|
||||
ConV[5] = Parallel::L2Norm(GH->PatL[levi]->data, Cons_Gy, GH->Commlev[levi]);
|
||||
ConV[6] = Parallel::L2Norm(GH->PatL[levi]->data, Cons_Gz, GH->Commlev[levi]);
|
||||
Parallel::L2Norm7(GH->PatL[levi]->data, ConstraintVars, ConV, GH->Commlev[levi]);
|
||||
// misc::tillherecheck("before collect data to cpu0");
|
||||
// MPI_ALLREDUCE( sendbuf, recvbuf, count, datatype, op, comm), sendbu and recvbuf must be different
|
||||
if (levi > 0)
|
||||
@@ -7474,6 +7783,9 @@ void bssn_class::Constraint_Out()
|
||||
Interp_Constraint(false);
|
||||
|
||||
LastConsOut = 0;
|
||||
if (ConstraintRefreshLevels)
|
||||
for (int lev = 0; lev < GH->levels; lev++)
|
||||
ConstraintRefreshLevels[lev] = 0;
|
||||
}
|
||||
}
|
||||
|
||||
|
||||
@@ -48,6 +48,7 @@ public:
|
||||
double StartTime, TotalTime;
|
||||
double AnasTime, DumpTime, d2DumpTime, CheckTime;
|
||||
double LastAnas, LastConsOut;
|
||||
int *ConstraintRefreshLevels;
|
||||
double Courant;
|
||||
double numepss, numepsb, numepsh;
|
||||
int Symmetry;
|
||||
@@ -134,7 +135,7 @@ public:
|
||||
Parallel::SyncCache *sync_cache_outbd; // cached OutBdLow2Hi in RestrictProlong
|
||||
|
||||
monitor *ErrorMonitor, *Psi4Monitor, *BHMonitor, *MAPMonitor;
|
||||
monitor *ConVMonitor;
|
||||
monitor *ConVMonitor, *TimingMonitor;
|
||||
surface_integral *Waveshell;
|
||||
checkpoint *CheckPoint;
|
||||
|
||||
|
||||
@@ -1891,7 +1891,7 @@ void bssn_class::Read_Ansorg()
|
||||
void bssn_class::Evolve(int Steps)
|
||||
{
|
||||
|
||||
double prev_clock = 0.0, curr_clock = 0.0;
|
||||
clock_t prev_clock, curr_clock;
|
||||
double LastDump = 0.0, LastCheck = 0.0, Last2dDump = 0.0;
|
||||
LastAnas = 0;
|
||||
#if 0
|
||||
@@ -2037,8 +2037,6 @@ void bssn_class::Evolve(int Steps)
|
||||
|
||||
for (int ncount = 1; ncount < Steps + 1; ncount++)
|
||||
{
|
||||
if (myrank == 0)
|
||||
curr_clock = MPI_Wtime();
|
||||
cout << "Before Step: " << ncount << " My Rank: " << myrank
|
||||
<< " takes " << MPI_Wtime() - beg_time << " seconds!" << endl;
|
||||
beg_time = MPI_Wtime();
|
||||
@@ -2098,9 +2096,9 @@ void bssn_class::Evolve(int Steps)
|
||||
if (myrank == 0)
|
||||
{
|
||||
prev_clock = curr_clock;
|
||||
curr_clock = MPI_Wtime();
|
||||
curr_clock = clock();
|
||||
cout << "Timestep # " << ncount << ": integrating to time: " << PhysTime << endl;
|
||||
cout << "used " << (curr_clock - prev_clock) << " seconds!" << endl;
|
||||
cout << "used " << (double)(curr_clock - prev_clock) / ((double)CLOCKS_PER_SEC) << " seconds!" << endl;
|
||||
}
|
||||
|
||||
if (PhysTime >= TotalTime)
|
||||
|
||||
@@ -32,6 +32,19 @@
|
||||
#define f_compute_rhs_Z4c_ss compute_rhs_z4c_ss_
|
||||
#define f_compute_constraint_fr compute_constraint_fr_
|
||||
#endif
|
||||
|
||||
#ifdef __cplusplus
|
||||
extern "C"
|
||||
{
|
||||
#endif
|
||||
void f_bssn_rhs_kernel_timing_reset();
|
||||
int f_bssn_rhs_kernel_timing_bucket_count();
|
||||
const double *f_bssn_rhs_kernel_timing_local_seconds();
|
||||
const char *f_bssn_rhs_kernel_timing_label(int);
|
||||
#ifdef __cplusplus
|
||||
}
|
||||
#endif
|
||||
|
||||
extern "C"
|
||||
{
|
||||
int f_compute_rhs_bssn(int *, double &, double *, double *, double *, // ex,T,X,Y,Z
|
||||
|
||||
@@ -2,30 +2,88 @@
|
||||
#include "bssn_rhs.h"
|
||||
#include "share_func.h"
|
||||
#include "tool.h"
|
||||
|
||||
#ifdef _OPENMP
|
||||
#define BSSN_OMP_TASK_GROUP_BEGIN \
|
||||
_Pragma("omp parallel") \
|
||||
{ \
|
||||
_Pragma("omp single nowait") \
|
||||
{
|
||||
#define BSSN_OMP_TASK_CALL(...) \
|
||||
_Pragma("omp task") { __VA_ARGS__; }
|
||||
#define BSSN_OMP_TASK_GROUP_END \
|
||||
_Pragma("omp taskwait") \
|
||||
} \
|
||||
}
|
||||
#else
|
||||
#define BSSN_OMP_TASK_GROUP_BEGIN {
|
||||
#define BSSN_OMP_TASK_CALL(...) { __VA_ARGS__; }
|
||||
#define BSSN_OMP_TASK_GROUP_END }
|
||||
#endif
|
||||
#include <time.h>
|
||||
// 0-based i,j,k
|
||||
// #define IDX_F(i,j,k,nx,ny) ((i) + (j)*(nx) + (k)*(nx)*(ny))
|
||||
// ex(1)=nx, ex(2)=ny, ex(3)=nz
|
||||
|
||||
// 用法:a[ IDX_F(i,j,k,nx,ny) ]
|
||||
|
||||
#ifndef BSSN_KERNEL_FINE_TIMING
|
||||
#define BSSN_KERNEL_FINE_TIMING 0
|
||||
#endif
|
||||
|
||||
#if BSSN_KERNEL_FINE_TIMING
|
||||
namespace rhs_kernel_timing
|
||||
{
|
||||
enum Bucket
|
||||
{
|
||||
KB_SETUP_DERIVS = 0,
|
||||
KB_GEOM_GAMMA,
|
||||
KB_RICCI_METRIC,
|
||||
KB_CHI_LAPSE,
|
||||
KB_AIJ_TRK_GAUGE,
|
||||
KB_KO_CONSTRAINT,
|
||||
KB_COUNT
|
||||
};
|
||||
|
||||
static double local_bucket_seconds[KB_COUNT];
|
||||
|
||||
static const char *bucket_labels[KB_COUNT] =
|
||||
{
|
||||
"setup_derivs",
|
||||
"geom_gamma",
|
||||
"ricci_metric",
|
||||
"chi_lapse",
|
||||
"aij_trk_gauge",
|
||||
"ko_constraint"
|
||||
};
|
||||
|
||||
static inline double now_seconds()
|
||||
{
|
||||
struct timespec ts;
|
||||
clock_gettime(CLOCK_MONOTONIC, &ts);
|
||||
return double(ts.tv_sec) + 1.0e-9 * double(ts.tv_nsec);
|
||||
}
|
||||
}
|
||||
|
||||
extern "C" void f_bssn_rhs_kernel_timing_reset()
|
||||
{
|
||||
for (int i = 0; i < rhs_kernel_timing::KB_COUNT; ++i)
|
||||
rhs_kernel_timing::local_bucket_seconds[i] = 0.0;
|
||||
}
|
||||
|
||||
extern "C" int f_bssn_rhs_kernel_timing_bucket_count()
|
||||
{
|
||||
return rhs_kernel_timing::KB_COUNT;
|
||||
}
|
||||
|
||||
extern "C" const double *f_bssn_rhs_kernel_timing_local_seconds()
|
||||
{
|
||||
return rhs_kernel_timing::local_bucket_seconds;
|
||||
}
|
||||
|
||||
extern "C" const char *f_bssn_rhs_kernel_timing_label(int bucket_index)
|
||||
{
|
||||
if (bucket_index < 0 || bucket_index >= rhs_kernel_timing::KB_COUNT)
|
||||
return "unknown";
|
||||
return rhs_kernel_timing::bucket_labels[bucket_index];
|
||||
}
|
||||
|
||||
#define RHS_KERNEL_TIMER_DECL(var_name) const double var_name = rhs_kernel_timing::now_seconds()
|
||||
#define RHS_KERNEL_TIMER_ADD(bucket_name, var_name) \
|
||||
rhs_kernel_timing::local_bucket_seconds[int(rhs_kernel_timing::bucket_name)] += \
|
||||
rhs_kernel_timing::now_seconds() - (var_name)
|
||||
#else
|
||||
extern "C" void f_bssn_rhs_kernel_timing_reset() {}
|
||||
extern "C" int f_bssn_rhs_kernel_timing_bucket_count() { return 0; }
|
||||
extern "C" const double *f_bssn_rhs_kernel_timing_local_seconds() { return 0; }
|
||||
extern "C" const char *f_bssn_rhs_kernel_timing_label(int) { return "disabled"; }
|
||||
|
||||
#define RHS_KERNEL_TIMER_DECL(var_name)
|
||||
#define RHS_KERNEL_TIMER_ADD(bucket_name, var_name)
|
||||
#endif
|
||||
|
||||
// C function that calculates the right-hand side for BSSN equations
|
||||
int f_compute_rhs_bssn(int *ex, double &T,
|
||||
double *X, double *Y, double *Z,
|
||||
@@ -120,26 +178,25 @@ int f_compute_rhs_bssn(int *ex, double &T,
|
||||
dY = Y[1] - Y[0];
|
||||
dZ = Z[1] - Z[0];
|
||||
|
||||
RHS_KERNEL_TIMER_DECL(timer_setup_derivs);
|
||||
// 1ms //
|
||||
for(int i=0;i<all;i+=1){
|
||||
alpn1[i] = Lap[i] + 1.0;
|
||||
chin1[i] = chi[i] + 1.0;
|
||||
}
|
||||
// 9ms //
|
||||
BSSN_OMP_TASK_GROUP_BEGIN
|
||||
BSSN_OMP_TASK_CALL(fderivs(ex,betax,betaxx,betaxy,betaxz,X,Y,Z,ANTI, SYM, SYM,Symmetry,Lev))
|
||||
BSSN_OMP_TASK_CALL(fderivs(ex,betay,betayx,betayy,betayz,X,Y,Z, SYM,ANTI, SYM,Symmetry,Lev))
|
||||
BSSN_OMP_TASK_CALL(fderivs(ex,betaz,betazx,betazy,betazz,X,Y,Z, SYM, SYM,ANTI,Symmetry,Lev))
|
||||
BSSN_OMP_TASK_CALL(fderivs(ex,chi,chix,chiy,chiz,X,Y,Z,SYM,SYM,SYM,Symmetry,Lev))
|
||||
BSSN_OMP_TASK_CALL(fderivs(ex,dxx,gxxx,gxxy,gxxz,X,Y,Z,SYM ,SYM ,SYM ,Symmetry,Lev))
|
||||
BSSN_OMP_TASK_CALL(fderivs(ex,gxy,gxyx,gxyy,gxyz,X,Y,Z,ANTI,ANTI,SYM ,Symmetry,Lev))
|
||||
BSSN_OMP_TASK_CALL(fderivs(ex,gxz,gxzx,gxzy,gxzz,X,Y,Z,ANTI,SYM ,ANTI,Symmetry,Lev))
|
||||
BSSN_OMP_TASK_CALL(fderivs(ex,dyy,gyyx,gyyy,gyyz,X,Y,Z,SYM ,SYM ,SYM ,Symmetry,Lev))
|
||||
BSSN_OMP_TASK_CALL(fderivs(ex,gyz,gyzx,gyzy,gyzz,X,Y,Z,SYM ,ANTI,ANTI,Symmetry,Lev))
|
||||
BSSN_OMP_TASK_CALL(fderivs(ex,dzz,gzzx,gzzy,gzzz,X,Y,Z,SYM ,SYM ,SYM ,Symmetry,Lev))
|
||||
BSSN_OMP_TASK_CALL(fderivs(ex,Lap,Lapx,Lapy,Lapz,X,Y,Z,SYM,SYM,SYM,Symmetry,Lev))
|
||||
BSSN_OMP_TASK_CALL(fderivs(ex,trK,Kx,Ky,Kz,X,Y,Z,SYM,SYM,SYM,Symmetry,Lev))
|
||||
BSSN_OMP_TASK_GROUP_END
|
||||
fderivs(ex,betax,betaxx,betaxy,betaxz,X,Y,Z,ANTI, SYM, SYM,Symmetry,Lev);
|
||||
fderivs(ex,betay,betayx,betayy,betayz,X,Y,Z, SYM,ANTI, SYM,Symmetry,Lev);
|
||||
fderivs(ex,betaz,betazx,betazy,betazz,X,Y,Z, SYM, SYM,ANTI,Symmetry,Lev);
|
||||
fderivs(ex,chi,chix,chiy,chiz,X,Y,Z,SYM,SYM,SYM,Symmetry,Lev);
|
||||
fderivs(ex,dxx,gxxx,gxxy,gxxz,X,Y,Z,SYM ,SYM ,SYM ,Symmetry,Lev);
|
||||
fderivs(ex,gxy,gxyx,gxyy,gxyz,X,Y,Z,ANTI,ANTI,SYM ,Symmetry,Lev);
|
||||
fderivs(ex,gxz,gxzx,gxzy,gxzz,X,Y,Z,ANTI,SYM ,ANTI,Symmetry,Lev);
|
||||
fderivs(ex,dyy,gyyx,gyyy,gyyz,X,Y,Z,SYM ,SYM ,SYM ,Symmetry,Lev);
|
||||
fderivs(ex,gyz,gyzx,gyzy,gyzz,X,Y,Z,SYM ,ANTI,ANTI,Symmetry,Lev);
|
||||
fderivs(ex,dzz,gzzx,gzzy,gzzz,X,Y,Z,SYM ,SYM ,SYM ,Symmetry,Lev);
|
||||
fderivs(ex,Lap,Lapx,Lapy,Lapz,X,Y,Z,SYM,SYM,SYM,Symmetry,Lev);
|
||||
fderivs(ex,trK,Kx,Ky,Kz,X,Y,Z,SYM,SYM,SYM,Symmetry,Lev);
|
||||
|
||||
// 3ms //
|
||||
for(int i=0;i<all;i+=1){
|
||||
@@ -161,6 +218,8 @@ int f_compute_rhs_bssn(int *ex, double &T,
|
||||
(dxx[i] + ONE) * betaxz[i] + gxy[i] * betayz[i] + gyz[i] * betayx[i]
|
||||
+ (dzz[i] + ONE) * betazx[i] - gxz[i] * betayy[i];
|
||||
}
|
||||
RHS_KERNEL_TIMER_ADD(KB_SETUP_DERIVS, timer_setup_derivs);
|
||||
RHS_KERNEL_TIMER_DECL(timer_geom_gamma);
|
||||
// Fused: inverse metric + Gamma constraint + Christoffel (3 loops -> 1)
|
||||
for(int i=0;i<all;i+=1){
|
||||
double det = (dxx[i] + ONE) * (dyy[i] + ONE) * (dzz[i] + ONE) + gxy[i] * gyz[i] * gxz[i] + gxz[i] * gxy[i] * gyz[i] -
|
||||
@@ -303,9 +362,6 @@ int f_compute_rhs_bssn(int *ex, double &T,
|
||||
+ ( gupxy[i]*gupyz[i] + gupyy[i]*gupxz[i] ) * Axy[i]
|
||||
+ ( gupxy[i]*gupzz[i] + gupyz[i]*gupxz[i] ) * Axz[i]
|
||||
+ ( gupyy[i]*gupzz[i] + gupyz[i]*gupyz[i] ) * Ayz[i];
|
||||
Rxx[i] = axx; Ryy[i] = ayy; Rzz[i] = azz;
|
||||
Rxy[i] = axy; Rxz[i] = axz; Ryz[i] = ayz;
|
||||
|
||||
Gamx_rhs[i] = - TWO * ( Lapx[i]*axx + Lapy[i]*axy + Lapz[i]*axz ) +
|
||||
TWO * alpn1[i] * (
|
||||
-F3o2/chin1[i] * ( chix[i]*axx + chiy[i]*axy + chiz[i]*axz ) -
|
||||
@@ -335,15 +391,18 @@ int f_compute_rhs_bssn(int *ex, double &T,
|
||||
+ TWO * ( Gamzxy[i]*axy + Gamzxz[i]*axz + Gamzyz[i]*ayz )
|
||||
);
|
||||
}
|
||||
RHS_KERNEL_TIMER_ADD(KB_GEOM_GAMMA, timer_geom_gamma);
|
||||
RHS_KERNEL_TIMER_DECL(timer_ricci_metric);
|
||||
// 22.3ms //
|
||||
BSSN_OMP_TASK_GROUP_BEGIN
|
||||
BSSN_OMP_TASK_CALL(fdderivs(ex,betax,gxxx,gxyx,gxzx,gyyx,gyzx,gzzx,X,Y,Z,ANTI,SYM, SYM ,Symmetry,Lev))
|
||||
BSSN_OMP_TASK_CALL(fdderivs(ex,betay,gxxy,gxyy,gxzy,gyyy,gyzy,gzzy,X,Y,Z,SYM ,ANTI,SYM ,Symmetry,Lev))
|
||||
BSSN_OMP_TASK_CALL(fdderivs(ex,betaz,gxxz,gxyz,gxzz,gyyz,gyzz,gzzz,X,Y,Z,SYM ,SYM, ANTI,Symmetry,Lev))
|
||||
BSSN_OMP_TASK_CALL(fderivs(ex,Gamx,Gamxx,Gamxy,Gamxz,X,Y,Z,ANTI,SYM ,SYM ,Symmetry,Lev))
|
||||
BSSN_OMP_TASK_CALL(fderivs(ex,Gamy,Gamyx,Gamyy,Gamyz,X,Y,Z,SYM ,ANTI,SYM ,Symmetry,Lev))
|
||||
BSSN_OMP_TASK_CALL(fderivs(ex,Gamz,Gamzx,Gamzy,Gamzz,X,Y,Z,SYM ,SYM ,ANTI,Symmetry,Lev))
|
||||
BSSN_OMP_TASK_GROUP_END
|
||||
fdderivs(ex,betax,gxxx,gxyx,gxzx,gyyx,gyzx,gzzx,
|
||||
X,Y,Z,ANTI,SYM, SYM ,Symmetry,Lev);
|
||||
fdderivs(ex,betay,gxxy,gxyy,gxzy,gyyy,gyzy,gzzy,
|
||||
X,Y,Z,SYM ,ANTI,SYM ,Symmetry,Lev);
|
||||
fdderivs(ex,betaz,gxxz,gxyz,gxzz,gyyz,gyzz,gzzz,
|
||||
X,Y,Z,SYM ,SYM, ANTI,Symmetry,Lev);
|
||||
fderivs(ex,Gamx,Gamxx,Gamxy,Gamxz,X,Y,Z,ANTI,SYM ,SYM ,Symmetry,Lev);
|
||||
fderivs(ex,Gamy,Gamyx,Gamyy,Gamyz,X,Y,Z,SYM ,ANTI,SYM ,Symmetry,Lev);
|
||||
fderivs(ex,Gamz,Gamzx,Gamzy,Gamzz,X,Y,Z,SYM ,SYM ,ANTI,Symmetry,Lev);
|
||||
|
||||
// Fused: fxx/Gamxa + Gamma_rhs part 2 (2 loops -> 1)
|
||||
for(int i=0;i<all;i+=1){
|
||||
@@ -351,7 +410,6 @@ int f_compute_rhs_bssn(int *ex, double &T,
|
||||
double lfxx = gxxx[i] + gxyy[i] + gxzz[i];
|
||||
double lfxy = gxyx[i] + gyyy[i] + gyzz[i];
|
||||
double lfxz = gxzx[i] + gyzy[i] + gzzz[i];
|
||||
fxx[i] = lfxx; fxy[i] = lfxy; fxz[i] = lfxz;
|
||||
|
||||
double gxa = gupxx[i]*Gamxxx[i] + gupyy[i]*Gamxyy[i] + gupzz[i]*Gamxzz[i]
|
||||
+ TWO * ( gupxy[i]*Gamxxy[i] + gupxz[i]*Gamxxz[i] + gupyz[i]*Gamxyz[i] );
|
||||
@@ -705,69 +763,74 @@ int f_compute_rhs_bssn(int *ex, double &T,
|
||||
+ Gamxyz[i] * gzzx[i] + Gamyyz[i] * gzzy[i] + Gamzyz[i] * gzzz[i]
|
||||
);
|
||||
}
|
||||
RHS_KERNEL_TIMER_ADD(KB_RICCI_METRIC, timer_ricci_metric);
|
||||
|
||||
RHS_KERNEL_TIMER_DECL(timer_chi_lapse);
|
||||
// 22.3ms //
|
||||
fdderivs(ex,chi,fxx,fxy,fxz,fyy,fyz,fzz,X,Y,Z,SYM,SYM,SYM,Symmetry,Lev);
|
||||
|
||||
// 7ms //
|
||||
for (int i=0;i<all;i+=1) {
|
||||
fxx[i] = fxx[i] - Gamxxx[i] * chix[i] - Gamyxx[i] * chiy[i] - Gamzxx[i] * chiz[i];
|
||||
fxy[i] = fxy[i] - Gamxxy[i] * chix[i] - Gamyxy[i] * chiy[i] - Gamzxy[i] * chiz[i];
|
||||
fxz[i] = fxz[i] - Gamxxz[i] * chix[i] - Gamyxz[i] * chiy[i] - Gamzxz[i] * chiz[i];
|
||||
fyy[i] = fyy[i] - Gamxyy[i] * chix[i] - Gamyyy[i] * chiy[i] - Gamzyy[i] * chiz[i];
|
||||
fyz[i] = fyz[i] - Gamxyz[i] * chix[i] - Gamyyz[i] * chiy[i] - Gamzyz[i] * chiz[i];
|
||||
fzz[i] = fzz[i] - Gamxzz[i] * chix[i] - Gamyzz[i] * chiy[i] - Gamzzz[i] * chiz[i];
|
||||
f[i] =
|
||||
gupxx[i] * (fxx[i] - (F3o2 / chin1[i]) * chix[i] * chix[i])
|
||||
+ gupyy[i] * (fyy[i] - (F3o2 / chin1[i]) * chiy[i] * chiy[i])
|
||||
+ gupzz[i] * (fzz[i] - (F3o2 / chin1[i]) * chiz[i] * chiz[i])
|
||||
+ TWO * gupxy[i] * (fxy[i] - (F3o2 / chin1[i]) * chix[i] * chiy[i])
|
||||
+ TWO * gupxz[i] * (fxz[i] - (F3o2 / chin1[i]) * chix[i] * chiz[i])
|
||||
+ TWO * gupyz[i] * (fyz[i] - (F3o2 / chin1[i]) * chiy[i] * chiz[i]);
|
||||
Rxx[i] = Rxx[i] + ( fxx[i] - (chix[i] * chix[i]) / (chin1[i] * TWO) + (dxx[i] + ONE) * f[i] ) / (chin1[i] * TWO);
|
||||
Ryy[i] = Ryy[i] + ( fyy[i] - (chiy[i] * chiy[i]) / (chin1[i] * TWO) + (dyy[i] + ONE) * f[i] ) / (chin1[i] * TWO);
|
||||
Rzz[i] = Rzz[i] + ( fzz[i] - (chiz[i] * chiz[i]) / (chin1[i] * TWO) + (dzz[i] + ONE) * f[i] ) / (chin1[i] * TWO);
|
||||
const double inv_chin1 = ONE / chin1[i];
|
||||
const double half_inv_chin1 = HALF * inv_chin1;
|
||||
const double scaled_inv = F3o2 * inv_chin1;
|
||||
const double cxx = fxx[i] - Gamxxx[i] * chix[i] - Gamyxx[i] * chiy[i] - Gamzxx[i] * chiz[i];
|
||||
const double cxy = fxy[i] - Gamxxy[i] * chix[i] - Gamyxy[i] * chiy[i] - Gamzxy[i] * chiz[i];
|
||||
const double cxz = fxz[i] - Gamxxz[i] * chix[i] - Gamyxz[i] * chiy[i] - Gamzxz[i] * chiz[i];
|
||||
const double cyy = fyy[i] - Gamxyy[i] * chix[i] - Gamyyy[i] * chiy[i] - Gamzyy[i] * chiz[i];
|
||||
const double cyz = fyz[i] - Gamxyz[i] * chix[i] - Gamyyz[i] * chiy[i] - Gamzyz[i] * chiz[i];
|
||||
const double czz = fzz[i] - Gamxzz[i] * chix[i] - Gamyzz[i] * chiy[i] - Gamzzz[i] * chiz[i];
|
||||
const double ricci_chi =
|
||||
gupxx[i] * (cxx - scaled_inv * chix[i] * chix[i])
|
||||
+ gupyy[i] * (cyy - scaled_inv * chiy[i] * chiy[i])
|
||||
+ gupzz[i] * (czz - scaled_inv * chiz[i] * chiz[i])
|
||||
+ TWO * gupxy[i] * (cxy - scaled_inv * chix[i] * chiy[i])
|
||||
+ TWO * gupxz[i] * (cxz - scaled_inv * chix[i] * chiz[i])
|
||||
+ TWO * gupyz[i] * (cyz - scaled_inv * chiy[i] * chiz[i]);
|
||||
f[i] = ricci_chi;
|
||||
Rxx[i] = Rxx[i] + ( cxx - half_inv_chin1 * chix[i] * chix[i] + (dxx[i] + ONE) * ricci_chi ) * half_inv_chin1;
|
||||
Ryy[i] = Ryy[i] + ( cyy - half_inv_chin1 * chiy[i] * chiy[i] + (dyy[i] + ONE) * ricci_chi ) * half_inv_chin1;
|
||||
Rzz[i] = Rzz[i] + ( czz - half_inv_chin1 * chiz[i] * chiz[i] + (dzz[i] + ONE) * ricci_chi ) * half_inv_chin1;
|
||||
|
||||
Rxy[i] = Rxy[i] + ( fxy[i] - (chix[i] * chiy[i]) / (chin1[i] * TWO) + gxy[i] * f[i] ) / (chin1[i] * TWO);
|
||||
Rxz[i] = Rxz[i] + ( fxz[i] - (chix[i] * chiz[i]) / (chin1[i] * TWO) + gxz[i] * f[i] ) / (chin1[i] * TWO);
|
||||
Ryz[i] = Ryz[i] + ( fyz[i] - (chiy[i] * chiz[i]) / (chin1[i] * TWO) + gyz[i] * f[i] ) / (chin1[i] * TWO);
|
||||
Rxy[i] = Rxy[i] + ( cxy - half_inv_chin1 * chix[i] * chiy[i] + gxy[i] * ricci_chi ) * half_inv_chin1;
|
||||
Rxz[i] = Rxz[i] + ( cxz - half_inv_chin1 * chix[i] * chiz[i] + gxz[i] * ricci_chi ) * half_inv_chin1;
|
||||
Ryz[i] = Ryz[i] + ( cyz - half_inv_chin1 * chiy[i] * chiz[i] + gyz[i] * ricci_chi ) * half_inv_chin1;
|
||||
}
|
||||
|
||||
// 24ms //
|
||||
fdderivs(ex,Lap,fxx,fxy,fxz,fyy,fyz,fzz,X,Y,Z,SYM,SYM,SYM,Symmetry,Lev);
|
||||
fderivs(ex,chi,dtSfx_rhs,dtSfy_rhs,dtSfz_rhs,X,Y,Z,SYM,SYM,SYM,Symmetry,Lev);
|
||||
|
||||
// 6ms //
|
||||
for (int i=0;i<all;i+=1) {
|
||||
/* gxxx,gxxy,gxxz (这里是“升指标后的chi导数/chi”那类量,你沿用原变量名即可) */
|
||||
gxxx[i] = (gupxx[i] * chix[i] + gupxy[i] * chiy[i] + gupxz[i] * chiz[i]) / chin1[i];
|
||||
gxxy[i] = (gupxy[i] * chix[i] + gupyy[i] * chiy[i] + gupyz[i] * chiz[i]) / chin1[i];
|
||||
gxxz[i] = (gupxz[i] * chix[i] + gupyz[i] * chiy[i] + gupzz[i] * chiz[i]) / chin1[i];
|
||||
const double inv_chin1 = ONE / chin1[i];
|
||||
const double gchi_x = (gupxx[i] * chix[i] + gupxy[i] * chiy[i] + gupxz[i] * chiz[i]) * inv_chin1;
|
||||
const double gchi_y = (gupxy[i] * chix[i] + gupyy[i] * chiy[i] + gupyz[i] * chiz[i]) * inv_chin1;
|
||||
const double gchi_z = (gupxz[i] * chix[i] + gupyz[i] * chiy[i] + gupzz[i] * chiz[i]) * inv_chin1;
|
||||
|
||||
/* Christoffel 修正项 */
|
||||
Gamxxx[i] = Gamxxx[i] - ( ((chix[i] + chix[i]) / chin1[i]) - (dxx[i] + ONE) * gxxx[i] ) * HALF;
|
||||
Gamyxx[i] = Gamyxx[i] - ( 0.0 - (dxx[i] + ONE) * gxxy[i] ) * HALF; /* 原式只有 -gxx*gxxy */
|
||||
Gamzxx[i] = Gamzxx[i] - ( 0.0 - (dxx[i] + ONE) * gxxz[i] ) * HALF;
|
||||
Gamxxx[i] = Gamxxx[i] - ( ((chix[i] + chix[i]) * inv_chin1) - (dxx[i] + ONE) * gchi_x ) * HALF;
|
||||
Gamyxx[i] = Gamyxx[i] - ( 0.0 - (dxx[i] + ONE) * gchi_y ) * HALF; /* 原式只有 -gxx*gxxy */
|
||||
Gamzxx[i] = Gamzxx[i] - ( 0.0 - (dxx[i] + ONE) * gchi_z ) * HALF;
|
||||
|
||||
Gamxyy[i] = Gamxyy[i] - ( 0.0 - (dyy[i] + ONE) * gxxx[i] ) * HALF;
|
||||
Gamyyy[i] = Gamyyy[i] - ( ((chiy[i] + chiy[i]) / chin1[i]) - (dyy[i] + ONE) * gxxy[i] ) * HALF;
|
||||
Gamzyy[i] = Gamzyy[i] - ( 0.0 - (dyy[i] + ONE) * gxxz[i] ) * HALF;
|
||||
Gamxyy[i] = Gamxyy[i] - ( 0.0 - (dyy[i] + ONE) * gchi_x ) * HALF;
|
||||
Gamyyy[i] = Gamyyy[i] - ( ((chiy[i] + chiy[i]) * inv_chin1) - (dyy[i] + ONE) * gchi_y ) * HALF;
|
||||
Gamzyy[i] = Gamzyy[i] - ( 0.0 - (dyy[i] + ONE) * gchi_z ) * HALF;
|
||||
|
||||
Gamxzz[i] = Gamxzz[i] - ( 0.0 - (dzz[i] + ONE) * gxxx[i] ) * HALF;
|
||||
Gamyzz[i] = Gamyzz[i] - ( 0.0 - (dzz[i] + ONE) * gxxy[i] ) * HALF;
|
||||
Gamzzz[i] = Gamzzz[i] - ( ((chiz[i] + chiz[i]) / chin1[i]) - (dzz[i] + ONE) * gxxz[i] ) * HALF;
|
||||
Gamxzz[i] = Gamxzz[i] - ( 0.0 - (dzz[i] + ONE) * gchi_x ) * HALF;
|
||||
Gamyzz[i] = Gamyzz[i] - ( 0.0 - (dzz[i] + ONE) * gchi_y ) * HALF;
|
||||
Gamzzz[i] = Gamzzz[i] - ( ((chiz[i] + chiz[i]) * inv_chin1) - (dzz[i] + ONE) * gchi_z ) * HALF;
|
||||
|
||||
Gamxxy[i] = Gamxxy[i] - ( ( chiy[i] / chin1[i]) - gxy[i] * gxxx[i] ) * HALF;
|
||||
Gamyxy[i] = Gamyxy[i] - ( ( chix[i] / chin1[i]) - gxy[i] * gxxy[i] ) * HALF;
|
||||
Gamzxy[i] = Gamzxy[i] - ( 0.0 - gxy[i] * gxxz[i] ) * HALF;
|
||||
Gamxxy[i] = Gamxxy[i] - ( ( chiy[i] * inv_chin1) - gxy[i] * gchi_x ) * HALF;
|
||||
Gamyxy[i] = Gamyxy[i] - ( ( chix[i] * inv_chin1) - gxy[i] * gchi_y ) * HALF;
|
||||
Gamzxy[i] = Gamzxy[i] - ( 0.0 - gxy[i] * gchi_z ) * HALF;
|
||||
|
||||
Gamxxz[i] = Gamxxz[i] - ( ( chiz[i] / chin1[i]) - gxz[i] * gxxx[i] ) * HALF;
|
||||
Gamyxz[i] = Gamyxz[i] - ( 0.0 - gxz[i] * gxxy[i] ) * HALF;
|
||||
Gamzxz[i] = Gamzxz[i] - ( ( chix[i] / chin1[i]) - gxz[i] * gxxz[i] ) * HALF;
|
||||
Gamxxz[i] = Gamxxz[i] - ( ( chiz[i] * inv_chin1) - gxz[i] * gchi_x ) * HALF;
|
||||
Gamyxz[i] = Gamyxz[i] - ( 0.0 - gxz[i] * gchi_y ) * HALF;
|
||||
Gamzxz[i] = Gamzxz[i] - ( ( chix[i] * inv_chin1) - gxz[i] * gchi_z ) * HALF;
|
||||
|
||||
Gamxyz[i] = Gamxyz[i] - ( 0.0 - gyz[i] * gxxx[i] ) * HALF;
|
||||
Gamyyz[i] = Gamyyz[i] - ( ( chiz[i] / chin1[i]) - gyz[i] * gxxy[i] ) * HALF;
|
||||
Gamzyz[i] = Gamzyz[i] - ( ( chiy[i] / chin1[i]) - gyz[i] * gxxz[i] ) * HALF;
|
||||
Gamxyz[i] = Gamxyz[i] - ( 0.0 - gyz[i] * gchi_x ) * HALF;
|
||||
Gamyyz[i] = Gamyyz[i] - ( ( chiz[i] * inv_chin1) - gyz[i] * gchi_y ) * HALF;
|
||||
Gamzyz[i] = Gamzyz[i] - ( ( chiy[i] * inv_chin1) - gyz[i] * gchi_z ) * HALF;
|
||||
|
||||
/* fxx..fyz 修正:减去 Γ * ∂Lap */
|
||||
fxx[i] = fxx[i] - Gamxxx[i] * Lapx[i] - Gamyxx[i] * Lapy[i] - Gamzxx[i] * Lapz[i];
|
||||
@@ -781,6 +844,8 @@ int f_compute_rhs_bssn(int *ex, double &T,
|
||||
trK_rhs[i] = gupxx[i] * fxx[i] + gupyy[i] * fyy[i] + gupzz[i] * fzz[i]
|
||||
+ TWO * ( gupxy[i] * fxy[i] + gupxz[i] * fxz[i] + gupyz[i] * fyz[i] );
|
||||
}
|
||||
RHS_KERNEL_TIMER_ADD(KB_CHI_LAPSE, timer_chi_lapse);
|
||||
RHS_KERNEL_TIMER_DECL(timer_aij_trk_gauge);
|
||||
// 2.5ms //
|
||||
for (int i=0;i<all;i+=1) {
|
||||
const double divb = betaxx[i] + betayy[i] + betazz[i];
|
||||
@@ -1081,33 +1146,33 @@ int f_compute_rhs_bssn(int *ex, double &T,
|
||||
dtSfz_rhs[i] = Gamz_rhs[i] - reta[i] * dtSfz[i];
|
||||
#endif
|
||||
}
|
||||
RHS_KERNEL_TIMER_ADD(KB_AIJ_TRK_GAUGE, timer_aij_trk_gauge);
|
||||
RHS_KERNEL_TIMER_DECL(timer_ko_constraint);
|
||||
// advection + KO dissipation with shared symmetry buffer
|
||||
BSSN_OMP_TASK_GROUP_BEGIN
|
||||
BSSN_OMP_TASK_CALL(lopsided_kodis(ex,X,Y,Z,dxx,gxx_rhs,betax,betay,betaz,Symmetry,SSS,eps))
|
||||
BSSN_OMP_TASK_CALL(lopsided_kodis(ex,X,Y,Z,Gamz,Gamz_rhs,betax,betay,betaz,Symmetry,SSA,eps))
|
||||
BSSN_OMP_TASK_CALL(lopsided_kodis(ex,X,Y,Z,gxy,gxy_rhs,betax,betay,betaz,Symmetry,AAS,eps))
|
||||
BSSN_OMP_TASK_CALL(lopsided_kodis(ex,X,Y,Z,Lap,Lap_rhs,betax,betay,betaz,Symmetry,SSS,eps))
|
||||
BSSN_OMP_TASK_CALL(lopsided_kodis(ex,X,Y,Z,gxz,gxz_rhs,betax,betay,betaz,Symmetry,ASA,eps))
|
||||
BSSN_OMP_TASK_CALL(lopsided_kodis(ex,X,Y,Z,betax,betax_rhs,betax,betay,betaz,Symmetry,ASS,eps))
|
||||
BSSN_OMP_TASK_CALL(lopsided_kodis(ex,X,Y,Z,dyy,gyy_rhs,betax,betay,betaz,Symmetry,SSS,eps))
|
||||
BSSN_OMP_TASK_CALL(lopsided_kodis(ex,X,Y,Z,betay,betay_rhs,betax,betay,betaz,Symmetry,SAS,eps))
|
||||
BSSN_OMP_TASK_CALL(lopsided_kodis(ex,X,Y,Z,gyz,gyz_rhs,betax,betay,betaz,Symmetry,SAA,eps))
|
||||
BSSN_OMP_TASK_CALL(lopsided_kodis(ex,X,Y,Z,betaz,betaz_rhs,betax,betay,betaz,Symmetry,SSA,eps))
|
||||
BSSN_OMP_TASK_CALL(lopsided_kodis(ex,X,Y,Z,dzz,gzz_rhs,betax,betay,betaz,Symmetry,SSS,eps))
|
||||
BSSN_OMP_TASK_CALL(lopsided_kodis(ex,X,Y,Z,dtSfx,dtSfx_rhs,betax,betay,betaz,Symmetry,ASS,eps))
|
||||
BSSN_OMP_TASK_CALL(lopsided_kodis(ex,X,Y,Z,Axx,Axx_rhs,betax,betay,betaz,Symmetry,SSS,eps))
|
||||
BSSN_OMP_TASK_CALL(lopsided_kodis(ex,X,Y,Z,dtSfy,dtSfy_rhs,betax,betay,betaz,Symmetry,SAS,eps))
|
||||
BSSN_OMP_TASK_CALL(lopsided_kodis(ex,X,Y,Z,Axy,Axy_rhs,betax,betay,betaz,Symmetry,AAS,eps))
|
||||
BSSN_OMP_TASK_CALL(lopsided_kodis(ex,X,Y,Z,dtSfz,dtSfz_rhs,betax,betay,betaz,Symmetry,SSA,eps))
|
||||
BSSN_OMP_TASK_CALL(lopsided_kodis(ex,X,Y,Z,Axz,Axz_rhs,betax,betay,betaz,Symmetry,ASA,eps))
|
||||
BSSN_OMP_TASK_CALL(lopsided_kodis(ex,X,Y,Z,Ayy,Ayy_rhs,betax,betay,betaz,Symmetry,SSS,eps))
|
||||
BSSN_OMP_TASK_CALL(lopsided_kodis(ex,X,Y,Z,Ayz,Ayz_rhs,betax,betay,betaz,Symmetry,SAA,eps))
|
||||
BSSN_OMP_TASK_CALL(lopsided_kodis(ex,X,Y,Z,Azz,Azz_rhs,betax,betay,betaz,Symmetry,SSS,eps))
|
||||
BSSN_OMP_TASK_CALL(lopsided_kodis(ex,X,Y,Z,chi,chi_rhs,betax,betay,betaz,Symmetry,SSS,eps))
|
||||
BSSN_OMP_TASK_CALL(lopsided_kodis(ex,X,Y,Z,trK,trK_rhs,betax,betay,betaz,Symmetry,SSS,eps))
|
||||
BSSN_OMP_TASK_CALL(lopsided_kodis(ex,X,Y,Z,Gamx,Gamx_rhs,betax,betay,betaz,Symmetry,ASS,eps))
|
||||
BSSN_OMP_TASK_CALL(lopsided_kodis(ex,X,Y,Z,Gamy,Gamy_rhs,betax,betay,betaz,Symmetry,SAS,eps))
|
||||
BSSN_OMP_TASK_GROUP_END
|
||||
lopsided_kodis(ex,X,Y,Z,dxx,gxx_rhs,betax,betay,betaz,Symmetry,SSS,eps);
|
||||
lopsided_kodis(ex,X,Y,Z,Gamz,Gamz_rhs,betax,betay,betaz,Symmetry,SSA,eps);
|
||||
lopsided_kodis(ex,X,Y,Z,gxy,gxy_rhs,betax,betay,betaz,Symmetry,AAS,eps);
|
||||
lopsided_kodis(ex,X,Y,Z,Lap,Lap_rhs,betax,betay,betaz,Symmetry,SSS,eps);
|
||||
lopsided_kodis(ex,X,Y,Z,gxz,gxz_rhs,betax,betay,betaz,Symmetry,ASA,eps);
|
||||
lopsided_kodis(ex,X,Y,Z,betax,betax_rhs,betax,betay,betaz,Symmetry,ASS,eps);
|
||||
lopsided_kodis(ex,X,Y,Z,dyy,gyy_rhs,betax,betay,betaz,Symmetry,SSS,eps);
|
||||
lopsided_kodis(ex,X,Y,Z,betay,betay_rhs,betax,betay,betaz,Symmetry,SAS,eps);
|
||||
lopsided_kodis(ex,X,Y,Z,gyz,gyz_rhs,betax,betay,betaz,Symmetry,SAA,eps);
|
||||
lopsided_kodis(ex,X,Y,Z,betaz,betaz_rhs,betax,betay,betaz,Symmetry,SSA,eps);
|
||||
lopsided_kodis(ex,X,Y,Z,dzz,gzz_rhs,betax,betay,betaz,Symmetry,SSS,eps);
|
||||
lopsided_kodis(ex,X,Y,Z,dtSfx,dtSfx_rhs,betax,betay,betaz,Symmetry,ASS,eps);
|
||||
lopsided_kodis(ex,X,Y,Z,Axx,Axx_rhs,betax,betay,betaz,Symmetry,SSS,eps);
|
||||
lopsided_kodis(ex,X,Y,Z,dtSfy,dtSfy_rhs,betax,betay,betaz,Symmetry,SAS,eps);
|
||||
lopsided_kodis(ex,X,Y,Z,Axy,Axy_rhs,betax,betay,betaz,Symmetry,AAS,eps);
|
||||
lopsided_kodis(ex,X,Y,Z,dtSfz,dtSfz_rhs,betax,betay,betaz,Symmetry,SSA,eps);
|
||||
lopsided_kodis(ex,X,Y,Z,Axz,Axz_rhs,betax,betay,betaz,Symmetry,ASA,eps);
|
||||
lopsided_kodis(ex,X,Y,Z,Ayy,Ayy_rhs,betax,betay,betaz,Symmetry,SSS,eps);
|
||||
lopsided_kodis(ex,X,Y,Z,Ayz,Ayz_rhs,betax,betay,betaz,Symmetry,SAA,eps);
|
||||
lopsided_kodis(ex,X,Y,Z,Azz,Azz_rhs,betax,betay,betaz,Symmetry,SSS,eps);
|
||||
lopsided_kodis(ex,X,Y,Z,chi,chi_rhs,betax,betay,betaz,Symmetry,SSS,eps);
|
||||
lopsided_kodis(ex,X,Y,Z,trK,trK_rhs,betax,betay,betaz,Symmetry,SSS,eps);
|
||||
lopsided_kodis(ex,X,Y,Z,Gamx,Gamx_rhs,betax,betay,betaz,Symmetry,ASS,eps);
|
||||
lopsided_kodis(ex,X,Y,Z,Gamy,Gamy_rhs,betax,betay,betaz,Symmetry,SAS,eps);
|
||||
// 2ms //
|
||||
if(co==0){
|
||||
for (int i=0;i<all;i+=1) {
|
||||
@@ -1154,14 +1219,12 @@ int f_compute_rhs_bssn(int *ex, double &T,
|
||||
}
|
||||
|
||||
// 1ms //
|
||||
BSSN_OMP_TASK_GROUP_BEGIN
|
||||
BSSN_OMP_TASK_CALL(fderivs(ex,Axx,gxxx,gxxy,gxxz,X,Y,Z,SYM ,SYM ,SYM ,Symmetry,0))
|
||||
BSSN_OMP_TASK_CALL(fderivs(ex,Axy,gxyx,gxyy,gxyz,X,Y,Z,ANTI,ANTI,SYM ,Symmetry,0))
|
||||
BSSN_OMP_TASK_CALL(fderivs(ex,Axz,gxzx,gxzy,gxzz,X,Y,Z,ANTI,SYM ,ANTI,Symmetry,0))
|
||||
BSSN_OMP_TASK_CALL(fderivs(ex,Ayy,gyyx,gyyy,gyyz,X,Y,Z,SYM ,SYM ,SYM ,Symmetry,0))
|
||||
BSSN_OMP_TASK_CALL(fderivs(ex,Ayz,gyzx,gyzy,gyzz,X,Y,Z,SYM ,ANTI,ANTI,Symmetry,0))
|
||||
BSSN_OMP_TASK_CALL(fderivs(ex,Azz,gzzx,gzzy,gzzz,X,Y,Z,SYM ,SYM ,SYM ,Symmetry,0))
|
||||
BSSN_OMP_TASK_GROUP_END
|
||||
fderivs(ex,Axx,gxxx,gxxy,gxxz,X,Y,Z,SYM ,SYM ,SYM ,Symmetry,0);
|
||||
fderivs(ex,Axy,gxyx,gxyy,gxyz,X,Y,Z,ANTI,ANTI,SYM ,Symmetry,0);
|
||||
fderivs(ex,Axz,gxzx,gxzy,gxzz,X,Y,Z,ANTI,SYM ,ANTI,Symmetry,0);
|
||||
fderivs(ex,Ayy,gyyx,gyyy,gyyz,X,Y,Z,SYM ,SYM ,SYM ,Symmetry,0);
|
||||
fderivs(ex,Ayz,gyzx,gyzy,gyzz,X,Y,Z,SYM ,ANTI,ANTI,Symmetry,0);
|
||||
fderivs(ex,Azz,gzzx,gzzy,gzzz,X,Y,Z,SYM ,SYM ,SYM ,Symmetry,0);
|
||||
// 7ms //
|
||||
for (int i=0;i<all;i+=1) {
|
||||
gxxx[i] = gxxx[i] - ( Gamxxx[i] * Axx[i] + Gamyxx[i] * Axy[i] + Gamzxx[i] * Axz[i]
|
||||
@@ -1216,6 +1279,7 @@ int f_compute_rhs_bssn(int *ex, double &T,
|
||||
movz_Res[i] = movz_Res[i] - F2o3*Kz[i] - F8*PI*Sz[i];
|
||||
}
|
||||
}
|
||||
RHS_KERNEL_TIMER_ADD(KB_KO_CONSTRAINT, timer_ko_constraint);
|
||||
|
||||
|
||||
|
||||
|
||||
@@ -41,8 +41,8 @@ void fdderivs(const int ex[3],
|
||||
const size_t nz = (size_t)ex3 + 2;
|
||||
const size_t fh_size = nx * ny * nz;
|
||||
|
||||
static thread_local double *fh = NULL;
|
||||
static thread_local size_t cap = 0;
|
||||
static double *fh = NULL;
|
||||
static size_t cap = 0;
|
||||
|
||||
if (fh_size > cap) {
|
||||
free(fh);
|
||||
|
||||
@@ -50,8 +50,8 @@ void fderivs(const int ex[3],
|
||||
const size_t ny = (size_t)ex2 + 2;
|
||||
const size_t nz = (size_t)ex3 + 2;
|
||||
const size_t fh_size = nx * ny * nz;
|
||||
static thread_local double *fh = NULL;
|
||||
static thread_local size_t cap = 0;
|
||||
static double *fh = NULL;
|
||||
static size_t cap = 0;
|
||||
|
||||
if (fh_size > cap) {
|
||||
free(fh);
|
||||
|
||||
@@ -1514,6 +1514,81 @@ f_out = f_out*dX*dY*dZ
|
||||
return
|
||||
|
||||
end subroutine l2normhelper
|
||||
!--------------------------------------------------------------------------------------
|
||||
subroutine l2normhelper7(ex, X, Y, Z,xmin,ymin,zmin,xmax,ymax,zmax,&
|
||||
f1,f2,f3,f4,f5,f6,f7,f_out,gw)
|
||||
|
||||
implicit none
|
||||
!~~~~~~> Input parameters:
|
||||
integer,intent(in ):: ex(1:3)
|
||||
real*8, intent(in ):: X(1:ex(1)),Y(1:ex(2)),Z(1:ex(3)),xmin,ymin,zmin,xmax,ymax,zmax
|
||||
integer,intent(in)::gw
|
||||
real*8, dimension(ex(1),ex(2),ex(3)),intent(in) :: f1,f2,f3,f4,f5,f6,f7
|
||||
real*8, intent(out) :: f_out(7)
|
||||
!~~~~~~> Other variables:
|
||||
|
||||
real*8 :: dX, dY, dZ
|
||||
integer::imin,jmin,kmin
|
||||
integer::imax,jmax,kmax
|
||||
integer::i,j,k
|
||||
real*8 :: s1,s2,s3,s4,s5,s6,s7
|
||||
|
||||
dX = X(2) - X(1)
|
||||
dY = Y(2) - Y(1)
|
||||
dZ = Z(2) - Z(1)
|
||||
|
||||
! for ghost zone
|
||||
imin = gw+1
|
||||
jmin = gw+1
|
||||
kmin = gw+1
|
||||
|
||||
imax = ex(1) - gw
|
||||
jmax = ex(2) - gw
|
||||
kmax = ex(3) - gw
|
||||
|
||||
!for patch boundary (i.e., not ghost boundary)
|
||||
|
||||
if(dabs(X(ex(1))-xmax) < dX) imax = ex(1)
|
||||
if(dabs(Y(ex(2))-ymax) < dY) jmax = ex(2)
|
||||
if(dabs(Z(ex(3))-zmax) < dZ) kmax = ex(3)
|
||||
if(dabs(X(1)-xmin) < dX) imin = 1
|
||||
if(dabs(Y(1)-ymin) < dY) jmin = 1
|
||||
if(dabs(Z(1)-zmin) < dZ) kmin = 1
|
||||
|
||||
s1 = 0.d0
|
||||
s2 = 0.d0
|
||||
s3 = 0.d0
|
||||
s4 = 0.d0
|
||||
s5 = 0.d0
|
||||
s6 = 0.d0
|
||||
s7 = 0.d0
|
||||
|
||||
do k=kmin,kmax
|
||||
do j=jmin,jmax
|
||||
!DIR$ SIMD REDUCTION(+:s1,s2,s3,s4,s5,s6,s7)
|
||||
do i=imin,imax
|
||||
s1 = s1 + f1(i,j,k)*f1(i,j,k)
|
||||
s2 = s2 + f2(i,j,k)*f2(i,j,k)
|
||||
s3 = s3 + f3(i,j,k)*f3(i,j,k)
|
||||
s4 = s4 + f4(i,j,k)*f4(i,j,k)
|
||||
s5 = s5 + f5(i,j,k)*f5(i,j,k)
|
||||
s6 = s6 + f6(i,j,k)*f6(i,j,k)
|
||||
s7 = s7 + f7(i,j,k)*f7(i,j,k)
|
||||
enddo
|
||||
enddo
|
||||
enddo
|
||||
|
||||
f_out(1) = s1*dX*dY*dZ
|
||||
f_out(2) = s2*dX*dY*dZ
|
||||
f_out(3) = s3*dX*dY*dZ
|
||||
f_out(4) = s4*dX*dY*dZ
|
||||
f_out(5) = s5*dX*dY*dZ
|
||||
f_out(6) = s6*dX*dY*dZ
|
||||
f_out(7) = s7*dX*dY*dZ
|
||||
|
||||
return
|
||||
|
||||
end subroutine l2normhelper7
|
||||
!--------------------------------------------------------------------------------------
|
||||
! calculate L2norm especially for shell Blocks
|
||||
subroutine l2normhelper_sh(ex, X, Y, Z,xmin,ymin,zmin,xmax,ymax,zmax,&
|
||||
|
||||
@@ -13,6 +13,7 @@
|
||||
#define f_global_interpind2d global_interpind2d
|
||||
#define f_global_interpind1d global_interpind1d
|
||||
#define f_l2normhelper l2normhelper
|
||||
#define f_l2normhelper7 l2normhelper7
|
||||
#define f_l2normhelper_sh l2normhelper_sh
|
||||
#define f_l2normhelper_sh_rms l2normhelper_sh_rms
|
||||
#define f_average average
|
||||
@@ -42,6 +43,7 @@
|
||||
#define f_global_interpind2d GLOBAL_INTERPIND2D
|
||||
#define f_global_interpind1d GLOBAL_INTERPIND1D
|
||||
#define f_l2normhelper L2NORMHELPER
|
||||
#define f_l2normhelper7 L2NORMHELPER7
|
||||
#define f_l2normhelper_sh L2NORMHELPER_SH
|
||||
#define f_l2normhelper_sh_rms L2NORMHELPER_SH_RMS
|
||||
#define f_average AVERAGE
|
||||
@@ -71,6 +73,7 @@
|
||||
#define f_global_interpind2d global_interpind2d_
|
||||
#define f_global_interpind1d global_interpind1d_
|
||||
#define f_l2normhelper l2normhelper_
|
||||
#define f_l2normhelper7 l2normhelper7_
|
||||
#define f_l2normhelper_sh l2normhelper_sh_
|
||||
#define f_l2normhelper_sh_rms l2normhelper_sh_rms_
|
||||
#define f_average average_
|
||||
@@ -164,6 +167,15 @@ extern "C"
|
||||
double *, double &, int &);
|
||||
}
|
||||
|
||||
extern "C"
|
||||
{
|
||||
void f_l2normhelper7(int *, double *, double *, double *,
|
||||
double &, double &, double &,
|
||||
double &, double &, double &,
|
||||
double *, double *, double *, double *,
|
||||
double *, double *, double *, double *, int &);
|
||||
}
|
||||
|
||||
extern "C"
|
||||
{
|
||||
void f_l2normhelper_sh(int *, double *, double *, double *,
|
||||
|
||||
@@ -43,13 +43,7 @@ void lopsided_kodis(const int ex[3],
|
||||
const size_t nz = (size_t)ex3 + 3;
|
||||
const size_t fh_size = nx * ny * nz;
|
||||
|
||||
static thread_local double *fh = NULL;
|
||||
static thread_local size_t cap = 0;
|
||||
if (fh_size > cap) {
|
||||
free(fh);
|
||||
fh = (double*)aligned_alloc(64, fh_size * sizeof(double));
|
||||
cap = fh_size;
|
||||
}
|
||||
double *fh = (double*)malloc(fh_size * sizeof(double));
|
||||
if (!fh) return;
|
||||
|
||||
symmetry_bd(3, ex, f, fh, SoA);
|
||||
@@ -249,4 +243,6 @@ void lopsided_kodis(const int ex[3],
|
||||
}
|
||||
}
|
||||
}
|
||||
|
||||
free(fh);
|
||||
}
|
||||
|
||||
@@ -29,6 +29,16 @@
|
||||
|
||||
#define REGLEV 0
|
||||
|
||||
#define BSSN_FINE_TIMING 0
|
||||
|
||||
#define BSSN_FINE_TIMING_EVERY 1
|
||||
|
||||
#define BSSN_FINE_TIMING_TOPN 8
|
||||
|
||||
#define BSSN_KERNEL_FINE_TIMING 0
|
||||
|
||||
#define BSSN_ENABLE_STDIN_ABORT_POLL 0
|
||||
|
||||
//#define USE_GPU
|
||||
|
||||
//#define CHECKDETAIL
|
||||
@@ -88,6 +98,21 @@
|
||||
// 0: for every level;
|
||||
// 1: for all
|
||||
//
|
||||
// define BSSN_FINE_TIMING
|
||||
// enable fine-grained per-timestep timing monitor
|
||||
//
|
||||
// define BSSN_FINE_TIMING_EVERY
|
||||
// report timing every N coarse timesteps
|
||||
//
|
||||
// define BSSN_FINE_TIMING_TOPN
|
||||
// number of hottest timing buckets shown in stdout
|
||||
//
|
||||
// define BSSN_KERNEL_FINE_TIMING
|
||||
// enable split timing inside compute_rhs_bssn
|
||||
//
|
||||
// define BSSN_ENABLE_STDIN_ABORT_POLL
|
||||
// poll stdin and broadcast abort flag every coarse step
|
||||
//
|
||||
// define USE_GPU
|
||||
// use gpu or not
|
||||
//
|
||||
@@ -142,4 +167,3 @@
|
||||
#define TINY 1e-10
|
||||
|
||||
#endif /* MICRODEF_H */
|
||||
|
||||
|
||||
@@ -16,7 +16,7 @@ PROFDATA = /home/$(shell whoami)/AMSS-NCKU/pgo_profile/default.profdata
|
||||
ifeq ($(PGO_MODE),instrument)
|
||||
## Phase 1: instrumentation — omit -ipo/-fp-model fast=2 for faster build and numerical stability
|
||||
CXXAPPFLAGS = -O3 -xHost -fma -fprofile-instr-generate -ipo \
|
||||
-Dfortran3 -Dnewc -I${MKLROOT}/include $(INTERP_LB_FLAGS) $(OPENMP_FLAGS)
|
||||
-Dfortran3 -Dnewc -I${MKLROOT}/include $(INTERP_LB_FLAGS)
|
||||
f90appflags = -O3 -xHost -fma -fprofile-instr-generate -ipo \
|
||||
-align array64byte -fpp -I${MKLROOT}/include $(POLINT6_FLAG)
|
||||
else
|
||||
@@ -26,7 +26,7 @@ else
|
||||
|
||||
|
||||
CXXAPPFLAGS = -O3 -xHost -fp-model fast=2 -fma -ipo \
|
||||
-Dfortran3 -Dnewc -I${MKLROOT}/include $(INTERP_LB_FLAGS) $(OPENMP_FLAGS)
|
||||
-Dfortran3 -Dnewc -I${MKLROOT}/include $(INTERP_LB_FLAGS)
|
||||
f90appflags = -O3 -xHost -fp-model fast=2 -fma -ipo \
|
||||
-align array64byte -fpp -I${MKLROOT}/include $(POLINT6_FLAG)
|
||||
endif
|
||||
|
||||
@@ -29,9 +29,6 @@ endif
|
||||
## instrument : PGO Phase 1 instrumentation to collect fresh profile data
|
||||
PGO_MODE ?= opt
|
||||
|
||||
## OpenMP switch for C/C++ kernels
|
||||
OPENMP_FLAGS ?= -qopenmp
|
||||
|
||||
## Interp_Points load balance profiling mode
|
||||
## off : (default) no load balance instrumentation
|
||||
## profile : Pass 1 — instrument Interp_Points to collect timing profile
|
||||
|
||||
@@ -319,7 +319,7 @@ void scalar_class::Setup_Initial_Data()
|
||||
}
|
||||
void scalar_class::Evolve(int Steps)
|
||||
{
|
||||
double prev_clock = 0.0, curr_clock = 0.0;
|
||||
clock_t prev_clock, curr_clock;
|
||||
double LastDump = 0.0, LastCheck = 0.0;
|
||||
LastAnas = 0;
|
||||
|
||||
@@ -328,7 +328,7 @@ void scalar_class::Evolve(int Steps)
|
||||
for (int ncount = 1; ncount < Steps + 1; ncount++)
|
||||
{
|
||||
if (myrank == 0)
|
||||
curr_clock = MPI_Wtime();
|
||||
curr_clock = clock();
|
||||
RecursiveStep(0);
|
||||
|
||||
LastDump += dT_mon;
|
||||
@@ -346,9 +346,9 @@ void scalar_class::Evolve(int Steps)
|
||||
if (myrank == 0)
|
||||
{
|
||||
prev_clock = curr_clock;
|
||||
curr_clock = MPI_Wtime();
|
||||
curr_clock = clock();
|
||||
cout << " Timestep # " << ncount << ": integrating to time: " << PhysTime
|
||||
<< " Computer used " << (curr_clock - prev_clock) << " seconds! " << endl;
|
||||
<< " Computer used " << (double)(curr_clock - prev_clock) / ((double)CLOCKS_PER_SEC) << " seconds! " << endl;
|
||||
}
|
||||
if (PhysTime >= TotalTime)
|
||||
break;
|
||||
|
||||
File diff suppressed because it is too large
Load Diff
@@ -36,6 +36,11 @@ private:
|
||||
|
||||
double *nx_g, *ny_g, *nz_g; // global list of unit normals
|
||||
int myrank, cpusize;
|
||||
int wave_cache_spinw, wave_cache_maxl, wave_cache_modes;
|
||||
double *wave_theta_pos, *wave_theta_neg;
|
||||
double *wave_phi_cos, *wave_phi_sin;
|
||||
void clear_wave_cache();
|
||||
void build_wave_cache(int spinw, int maxl);
|
||||
|
||||
public:
|
||||
surface_integral(int iSymmetry);
|
||||
@@ -82,13 +87,29 @@ public:
|
||||
var *Axx, var *Axy, var *Axz, var *Ayy, var *Ayz, var *Azz,
|
||||
var *Gmx, var *Gmy, var *Gmz,
|
||||
var *Sfx_rhs, var *Sfy_rhs, var *Sfz_rhs,
|
||||
double *Rout, monitor *Monitor);
|
||||
double *Rout, monitor *Monitor, bool refresh_mass_fields = true);
|
||||
void surf_MassPAng(double rex, int lev, ShellPatch *GH, var *chi, var *trK,
|
||||
var *gxx, var *gxy, var *gxz, var *gyy, var *gyz, var *gzz,
|
||||
var *Axx, var *Axy, var *Axz, var *Ayy, var *Ayz, var *Azz,
|
||||
var *Gmx, var *Gmy, var *Gmz,
|
||||
var *Sfx_rhs, var *Sfy_rhs, var *Sfz_rhs,
|
||||
double *Rout, monitor *Monitor);
|
||||
double *Rout, monitor *Monitor, bool refresh_mass_fields = true);
|
||||
void surf_WaveMassPAng(double rex, int lev, cgh *GH,
|
||||
var *Rpsi4, var *Ipsi4, int spinw, int maxl, int NN, double *RP, double *IP,
|
||||
var *chi, var *trK,
|
||||
var *gxx, var *gxy, var *gxz, var *gyy, var *gyz, var *gzz,
|
||||
var *Axx, var *Axy, var *Axz, var *Ayy, var *Ayz, var *Azz,
|
||||
var *Gmx, var *Gmy, var *Gmz,
|
||||
var *Sfx_rhs, var *Sfy_rhs, var *Sfz_rhs,
|
||||
double *Rout, monitor *Monitor, bool refresh_mass_fields = true);
|
||||
void surf_WaveMassPAng(double rex, int lev, ShellPatch *GH,
|
||||
var *Rpsi4, var *Ipsi4, int spinw, int maxl, int NN, double *RP, double *IP,
|
||||
var *chi, var *trK,
|
||||
var *gxx, var *gxy, var *gxz, var *gyy, var *gyz, var *gzz,
|
||||
var *Axx, var *Axy, var *Axz, var *Ayy, var *Ayz, var *Azz,
|
||||
var *Gmx, var *Gmy, var *Gmz,
|
||||
var *Sfx_rhs, var *Sfy_rhs, var *Sfz_rhs,
|
||||
double *Rout, monitor *Monitor, bool refresh_mass_fields = true);
|
||||
void surf_Wave(double rex, cgh *GH, ShellPatch *SH,
|
||||
var *chi, var *trK,
|
||||
var *gxx, var *gxy, var *gxz, var *gyy, var *gyz, var *gzz,
|
||||
@@ -115,7 +136,7 @@ public:
|
||||
var *Axx, var *Axy, var *Axz, var *Ayy, var *Ayz, var *Azz,
|
||||
var *Gmx, var *Gmy, var *Gmz,
|
||||
var *Sfx_rhs, var *Sfy_rhs, var *Sfz_rhs, // temparay memory for mass^i
|
||||
double *Rout, monitor *Monitor, MPI_Comm Comm_here);
|
||||
double *Rout, monitor *Monitor, MPI_Comm Comm_here, bool refresh_mass_fields = true);
|
||||
void surf_Wave(double rex, int lev, cgh *GH, var *Rpsi4, var *Ipsi4,
|
||||
int spinw, int maxl, int NN, double *RP, double *IP,
|
||||
monitor *Monitor, MPI_Comm Comm_here);
|
||||
|
||||
@@ -144,6 +144,62 @@ def generate_macrodef_h():
|
||||
print( "#define REGLEV 0", file=file1 )
|
||||
print( file=file1 )
|
||||
|
||||
# Define fine-grained timing/debug macros.
|
||||
# All of them default to OFF so production builds do not pay profiling overhead.
|
||||
|
||||
fine_timing = getattr(input_data, "Fine_Timing",
|
||||
getattr(input_data, "Finegrained_Timing", "no"))
|
||||
kernel_fine_timing = getattr(input_data, "Kernel_Fine_Timing",
|
||||
getattr(input_data, "BSSN_Kernel_Fine_Timing", "no"))
|
||||
stdin_abort_poll = getattr(input_data, "Enable_Stdin_Abort_Poll",
|
||||
getattr(input_data, "Stdin_Abort_Poll", "no"))
|
||||
timing_report_every = max(1, int(getattr(
|
||||
input_data, "Timing_Every_Steps",
|
||||
getattr(input_data, "Timing_Report_Every", 1))))
|
||||
timing_top_hotspots = max(1, int(getattr(
|
||||
input_data, "Timing_Top_Hotspots", 8)))
|
||||
|
||||
if ( fine_timing == "yes" ):
|
||||
print( "#define BSSN_FINE_TIMING 1", file=file1 )
|
||||
print( file=file1 )
|
||||
elif ( fine_timing == "no" ):
|
||||
print( "#define BSSN_FINE_TIMING 0", file=file1 )
|
||||
print( file=file1 )
|
||||
else:
|
||||
print( "Fine_Timing setting error!!!" )
|
||||
print()
|
||||
print( "# Fine_Timing setting error!!!", file=file1 )
|
||||
print( file=file1 )
|
||||
|
||||
print( f"#define BSSN_FINE_TIMING_EVERY {timing_report_every}", file=file1 )
|
||||
print( file=file1 )
|
||||
print( f"#define BSSN_FINE_TIMING_TOPN {timing_top_hotspots}", file=file1 )
|
||||
print( file=file1 )
|
||||
|
||||
if ( kernel_fine_timing == "yes" ):
|
||||
print( "#define BSSN_KERNEL_FINE_TIMING 1", file=file1 )
|
||||
print( file=file1 )
|
||||
elif ( kernel_fine_timing == "no" ):
|
||||
print( "#define BSSN_KERNEL_FINE_TIMING 0", file=file1 )
|
||||
print( file=file1 )
|
||||
else:
|
||||
print( "Kernel_Fine_Timing setting error!!!" )
|
||||
print()
|
||||
print( "# Kernel_Fine_Timing setting error!!!", file=file1 )
|
||||
print( file=file1 )
|
||||
|
||||
if ( stdin_abort_poll == "yes" ):
|
||||
print( "#define BSSN_ENABLE_STDIN_ABORT_POLL 1", file=file1 )
|
||||
print( file=file1 )
|
||||
elif ( stdin_abort_poll == "no" ):
|
||||
print( "#define BSSN_ENABLE_STDIN_ABORT_POLL 0", file=file1 )
|
||||
print( file=file1 )
|
||||
else:
|
||||
print( "Enable_Stdin_Abort_Poll setting error!!!" )
|
||||
print()
|
||||
print( "# Enable_Stdin_Abort_Poll setting error!!!", file=file1 )
|
||||
print( file=file1 )
|
||||
|
||||
# Define macro USE_GPU
|
||||
# use GPU or not
|
||||
|
||||
@@ -224,6 +280,21 @@ def generate_macrodef_h():
|
||||
print( "// 0: for every level;", file=file1 )
|
||||
print( "// 1: for all", file=file1 )
|
||||
print( "//", file=file1 )
|
||||
print( "// define BSSN_FINE_TIMING", file=file1 )
|
||||
print( "// enable fine-grained per-timestep timing monitor", file=file1 )
|
||||
print( "//", file=file1 )
|
||||
print( "// define BSSN_FINE_TIMING_EVERY", file=file1 )
|
||||
print( "// report timing every N coarse timesteps", file=file1 )
|
||||
print( "//", file=file1 )
|
||||
print( "// define BSSN_FINE_TIMING_TOPN", file=file1 )
|
||||
print( "// number of hottest timing buckets shown in stdout", file=file1 )
|
||||
print( "//", file=file1 )
|
||||
print( "// define BSSN_KERNEL_FINE_TIMING", file=file1 )
|
||||
print( "// enable split timing inside compute_rhs_bssn", file=file1 )
|
||||
print( "//", file=file1 )
|
||||
print( "// define BSSN_ENABLE_STDIN_ABORT_POLL", file=file1 )
|
||||
print( "// poll stdin and broadcast abort flag every coarse step", file=file1 )
|
||||
print( "//", file=file1 )
|
||||
print( "// define USE_GPU", file=file1 )
|
||||
print( "// use gpu or not", file=file1 )
|
||||
print( "//", file=file1 )
|
||||
|
||||
@@ -9,7 +9,6 @@
|
||||
|
||||
|
||||
import AMSS_NCKU_Input as input_data
|
||||
import os
|
||||
import subprocess
|
||||
import time
|
||||
|
||||
@@ -55,44 +54,6 @@ NUMACTL_CPU_BIND = get_last_n_cores_per_socket(n=32)
|
||||
BUILD_JOBS = 64
|
||||
|
||||
|
||||
def build_abe_runtime_env():
|
||||
"""Inject OpenMP runtime settings only for the main ABE evolution run."""
|
||||
runtime_env = os.environ.copy()
|
||||
omp_threads = max(1, int(getattr(input_data, "OMP_Threads", 1)))
|
||||
runtime_env["OMP_NUM_THREADS"] = str(omp_threads)
|
||||
return runtime_env
|
||||
|
||||
|
||||
def build_twopuncture_runtime_env():
|
||||
"""Let TwoPunctureABE use the runtime default instead of the ABE OMP override."""
|
||||
runtime_env = os.environ.copy()
|
||||
runtime_env.pop("OMP_NUM_THREADS", None)
|
||||
runtime_env.pop("OMP_THREAD_LIMIT", None)
|
||||
return runtime_env
|
||||
|
||||
|
||||
def build_mpi_launch_args():
|
||||
"""Build optional host-distribution arguments for mpirun."""
|
||||
hosts = list(getattr(input_data, "MPI_hosts", []))
|
||||
ppn = int(getattr(input_data, "MPI_processes_per_node", 0))
|
||||
|
||||
if not hosts:
|
||||
return ""
|
||||
|
||||
if ppn > 0:
|
||||
expected = len(hosts) * ppn
|
||||
if int(input_data.MPI_processes) != expected:
|
||||
raise ValueError(
|
||||
f"MPI_processes={input_data.MPI_processes} does not match "
|
||||
f"len(MPI_hosts) * MPI_processes_per_node = {expected}"
|
||||
)
|
||||
|
||||
launch_args = f"-hosts {','.join(hosts)}"
|
||||
if ppn > 0:
|
||||
launch_args += f" -ppn {ppn}"
|
||||
return launch_args
|
||||
|
||||
|
||||
##################################################################
|
||||
|
||||
|
||||
@@ -182,38 +143,19 @@ def run_ABE():
|
||||
print( )
|
||||
print( " Running the AMSS-NCKU executable file ABE/ABEGPU " )
|
||||
print( )
|
||||
print( f" MPI processes = {input_data.MPI_processes}, OMP threads per process = {max(1, int(getattr(input_data, 'OMP_Threads', 1)))}" )
|
||||
if getattr(input_data, "MPI_hosts", []):
|
||||
print( f" MPI hosts = {getattr(input_data, 'MPI_hosts', [])}, MPI ranks per node = {int(getattr(input_data, 'MPI_processes_per_node', 0))}" )
|
||||
print( " Multi-node runs require the working directory to be visible on all MPI hosts. " )
|
||||
print( )
|
||||
|
||||
## Define the command to run; cast other values to strings as needed
|
||||
mpi_launch_args = build_mpi_launch_args()
|
||||
|
||||
if (input_data.GPU_Calculation == "no"):
|
||||
mpi_command = NUMACTL_CPU_BIND + " mpirun "
|
||||
if mpi_launch_args:
|
||||
mpi_command += mpi_launch_args + " "
|
||||
mpi_command += "-np " + str(input_data.MPI_processes) + " ./ABE"
|
||||
mpi_command = NUMACTL_CPU_BIND + " mpirun -np " + str(input_data.MPI_processes) + " ./ABE"
|
||||
#mpi_command = " mpirun -np " + str(input_data.MPI_processes) + " ./ABE"
|
||||
mpi_command_outfile = "ABE_out.log"
|
||||
elif (input_data.GPU_Calculation == "yes"):
|
||||
mpi_command = NUMACTL_CPU_BIND + " mpirun "
|
||||
if mpi_launch_args:
|
||||
mpi_command += mpi_launch_args + " "
|
||||
mpi_command += "-np " + str(input_data.MPI_processes) + " ./ABEGPU"
|
||||
mpi_command = NUMACTL_CPU_BIND + " mpirun -np " + str(input_data.MPI_processes) + " ./ABEGPU"
|
||||
mpi_command_outfile = "ABEGPU_out.log"
|
||||
|
||||
## Execute the MPI command and stream output
|
||||
mpi_process = subprocess.Popen(
|
||||
mpi_command,
|
||||
shell=True,
|
||||
stdout=subprocess.PIPE,
|
||||
stderr=subprocess.STDOUT,
|
||||
text=True,
|
||||
env=build_abe_runtime_env(),
|
||||
)
|
||||
mpi_process = subprocess.Popen(mpi_command, shell=True, stdout=subprocess.PIPE, stderr=subprocess.STDOUT, text=True)
|
||||
|
||||
## Write ABE run output to file while printing to stdout
|
||||
with open(mpi_command_outfile, 'w') as file0:
|
||||
@@ -253,14 +195,7 @@ def run_TwoPunctureABE():
|
||||
TwoPuncture_command_outfile = "TwoPunctureABE_out.log"
|
||||
|
||||
## Execute the command with subprocess.Popen and stream output
|
||||
TwoPuncture_process = subprocess.Popen(
|
||||
TwoPuncture_command,
|
||||
shell=True,
|
||||
stdout=subprocess.PIPE,
|
||||
stderr=subprocess.STDOUT,
|
||||
text=True,
|
||||
env=build_twopuncture_runtime_env(),
|
||||
)
|
||||
TwoPuncture_process = subprocess.Popen(TwoPuncture_command, shell=True, stdout=subprocess.PIPE, stderr=subprocess.STDOUT, text=True)
|
||||
|
||||
## Write TwoPunctureABE run output to file while printing to stdout
|
||||
with open(TwoPuncture_command_outfile, 'w') as file0:
|
||||
|
||||
8
setup.py
8
setup.py
@@ -68,10 +68,6 @@ def print_input_data( File_directory ):
|
||||
print( " Printing the basic parameter and setting in the AMSS-NCKU simulation " )
|
||||
print( )
|
||||
print( " The number of MPI processes in the AMSS-NCKU simulation = ", input_data.MPI_processes )
|
||||
print( " The number of OMP threads per MPI process = ", input_data.OMP_Threads )
|
||||
if getattr(input_data, "MPI_hosts", []):
|
||||
print( " The MPI host list in the AMSS-NCKU simulation = ", input_data.MPI_hosts )
|
||||
print( " The number of MPI ranks launched per host = ", input_data.MPI_processes_per_node )
|
||||
print( )
|
||||
print( " The form of computational equation = ", input_data.Equation_Class )
|
||||
print( " The initial data in this simulation = ", input_data.Initial_Data_Method )
|
||||
@@ -147,10 +143,6 @@ def print_input_data( File_directory ):
|
||||
print( " Printing the basic parameter and setting in the AMSS-NCKU simulation ", file=file0 )
|
||||
print( file=file0 )
|
||||
print( " The number of MPI processes in the AMSS-NCKU simulation = ", input_data.MPI_processes, file=file0 )
|
||||
print( " The number of OMP threads per MPI process = ", input_data.OMP_Threads, file=file0 )
|
||||
if getattr(input_data, "MPI_hosts", []):
|
||||
print( " The MPI host list in the AMSS-NCKU simulation = ", input_data.MPI_hosts, file=file0 )
|
||||
print( " The number of MPI ranks launched per host = ", input_data.MPI_processes_per_node, file=file0 )
|
||||
print( file=file0 )
|
||||
print( " The form of computational equation = ", input_data.Equation_Class, file=file0 )
|
||||
print( " The initial data in this simulation = ", input_data.Initial_Data_Method, file=file0 )
|
||||
|
||||
Reference in New Issue
Block a user