asc26 amss-ncku initialized

makefile_include/cpu part/makefile_alps

@@ -0,0 +1,17 @@
+# $Id: makefile_alps,v 1.1 2012/11/08 11:54:00 zjcao Exp $
+#for ALPS PGI/openmpi
+
+filein  =
+LDLIBS  = -lpgf90 -lpgf902 -lpgf90rtl -lpgf90_rpm1 -lpgftnrtl -lpghpf -lpghpf2 -lpghpf_mpi
+# you can also replace the above long list with just "-lpgf90libs"
+
+
+CXXAPPFLAGS = -O2 -Dfortran3 -Dnewc
+f90appflags = -O2 -Mpreprocess
+
+f90 = mpif90
+f77 =
+CXX = mpicxx
+CC  = mpicc
+CLINKER = mpicxx
+

makefile_include/cpu part/makefile_altix

@@ -0,0 +1,13 @@
+# $Id: makefile_altix,v 1.2 2012/04/03 10:49:56 zjcao Exp $
+#used by altix.sccas.cn
+filein  = -I/usr/include
+
+LDLIBS  =  -L/usr/lib -L/opt/intel/fc/10.1.008/lib -lmpi -lifcore -limf -lintrins
+
+CXXAPPFLAGS = -O2 -Wno-deprecated -Dfortran3
+f90appflags = -O2
+f90 = ifort
+f77 = ifort
+CXX = icpc
+CC  = icc
+CLINKER = icpc

makefile_include/cpu part/makefile_bnu

@@ -0,0 +1,15 @@
+#$Id: makefile_bnu,v 1.2 2012/04/03 10:49:56 zjcao Exp $
+# bnu has two compiler systems
+# one is altix330
+# one is chess which is used here
+filein  = -I/usr/chess/mpich-gm-gcc34-1.2.6..14b/include 
+
+LDLIBS  = -L/opt/intel/fce/9.0/lib -lifcore -L/usr/chess/mpich-gm-gcc34-1.2.6..14b/lib64 -lmpich 
+
+CXXAPPFLAGS = -O2 -Dfortran3 -Dnewc -Wno-deprecated -DANSI_HEADERS -O2
+f90appflags = -O2
+f90 = ifort -fpp
+f77 = ifort -fpp -fixed
+CXX = g++
+CC  = gcc -Wno-deprecated -DANSI_HEADERS -O2
+CLINKER = g++

makefile_include/cpu part/makefile_cao

@@ -0,0 +1,62 @@
+# $Id: makefile_cao,v 1.2 2012/04/03 10:49:56 zjcao Exp $
+#used by mydesktop
+filein  = -I/home/zjcao/local/include
+
+LDLIBS  =  -L/home/zjcao/local/lib -lmpich -L/usr/lib -lgfortran 
+
+CXXAPPFLAGS = -O2 -Wno-deprecated -Dfortran3 -Dnewc
+f90appflags = -O2
+f90 = gfortran
+CXX = g++
+CLINKER = g++
+.SUFFIXES: .o .f90 .C
+
+.f90.o:
+	$(f90) $(f90appflags) -c $< -o $@
+
+.C.o:
+	${CXX} ${CXXAPPFLAGS} -c $< ${filein} -o $@
+
+# Input files
+C++FILES = ABE.o cgh.o grid.o misc.o var.o var_list.o gsl.o operate_gsl.o\
+           bssn_class.o monitor.o surface_integral.o interpolation_cgh.o\
+	   moving_box.o
+
+F90FILES = initial_puncture.o prolongrestrict_cell.o polynomial_interpolation.o\
+	   fmisc.o bssn.o cell_diff4.o rungekutta4_bssn.o sommerfeld_bssn.o\
+           rungekutta4_lapse_shift.o sommerfeld_lapse_shift.o\
+           enforce_algebra.o alwind_4th_9.o gauge_condition_9.o\
+	   bssn_constraint.o fadmquantites_bssn.o getnp4.o kodiss.o
+
+bssn_class.o: bssn_class.h cgh.h grid.h misc.h var.h gsl.h initial_puncture.h\
+	  prolongrestrict.h bssn.h rungekutta4_bssn.h sommerfeld_bssn.h\
+          rungekutta4_lapse_shift.h sommerfeld_lapse_shift.h\
+          enforce_algebra.h alwind_9.h gauge_condition_9.h operate_gsl.h\
+	  monitor.h surface_integral.h getnp4.h moving_box.h kodiss.h
+
+cgh.o: cgh.h
+
+grid.o: grid.h
+
+misc.o: misc.h
+
+var.o: var.h
+
+var_list.o: var.h var_list.h
+
+gsl.o: gsl.h
+
+operate_gsl.o: operate_gsl.h gsl.h
+
+bssn_class.o: bssn_class.h
+
+surface_integral.o: fadmquantites_bssn.h derivatives.h interpolation_cgh.h
+
+ABE.o: bssn_class.h
+
+interpolation_cgh.o: interpolation_cgh.h
+
+moving_box.o: moving_box.h
+
+ABE: $(C++FILES) $(F90FILES)
+	$(CLINKER) $(CXXAPPFLAGS) -o $@ $(C++FILES) $(F90FILES) $(LDLIBS)

makefile_include/cpu part/makefile_ibm1350

@@ -0,0 +1,12 @@
+#$Id: makefile_ibm1350,v 1.2 2012/04/03 10:49:56 zjcao Exp $
+filein = -I/opt/vltmpi/OPENIB/mpi.pgcc.rsh/include -I/opt/pgi/linux86-64/6.2/include
+
+LDLIBS = -L/opt/vltmpi/OPENIB/mpi.pgcc.rsh/lib -lmpich -L/usr/local/ofed/lib64 -libverbs -L/opt/pgi/linux86-64/6.2/lib -lpgf90 -lpgf902 -lpgf90rtl -lpgf90_rpm1 -lpgftnrtl -lpghpf -lpghpf2 -lpghpf_mpi -lstdc++
+
+CXXAPPFLAGS = -O2 -fast --no_warnings -DUNDERSCORE -DWant_c_files -DANSI_HEADERS -Dfortran3 -Dnewc
+f90appflags = -O3 -fast
+f90 = pgf90
+f77 = pgf77 -O3 -fast
+CXX = pgCC
+CC  = pgcc -O2 -fast --no_warnings -DUNDERSCORE -DWant_c_files -DANSI_HEADERS
+CLINKER = pgCC

makefile_include/cpu part/makefile_icm

@@ -0,0 +1,16 @@
+#$Id: makefile_icm,v 1.3 2013/08/20 11:49:04 zjcao Exp $
+filein  =  
+
+LDLIBS  = -L/opt/intel/Compiler/11.1/064/lib/intel64 -lifcore\
+	-L/opt/intel/Compiler/11.1/064/mkl/lib/em64t\
+	-L/opt/intel/Compiler/11.1/064/mkl/lib/em64t -lmkl -lguide -lpthread 
+
+GSLIB = -L/usr/lib64 -lgsl
+
+CXXAPPFLAGS = -O2 -Wno-deprecated -Dfortran3 -Dnewc
+f90appflags = -O2 -fpp
+f90 = mpif90
+f77 = mpif77
+CXX = mpicxx
+CC  = mpicc
+CLINKER = mpicxx 

makefile_include/cpu part/makefile_itp

@@ -0,0 +1,12 @@
+#$Id: makefile_itp,v 1.1 2013/01/26 11:23:09 zjcao Exp $
+filein  =  
+
+LDLIBS  = -lifcore
+
+CXXAPPFLAGS = -O2 -Wno-deprecated -Dfortran3 -Dnewc
+f90appflags = -O2 -fpp
+f90 = mpif90
+f77 = mpif77
+CXX = mpicxx
+CC  = mpicc
+CLINKER = mpicxx 

makefile_include/cpu part/makefile_makoto

@@ -0,0 +1,62 @@
+# $Id: makefile_makoto,v 1.2 2012/04/03 10:49:56 zjcao Exp $
+#used by makoto
+filein  = -I/opt/mpich127_gnu/include
+
+LDLIBS  =  -L/opt/mpich127_gnu/lib -lmpich -lgfortran 
+
+CXXAPPFLAGS = -O2 -Wno-deprecated -Dfortran3 -Dnewc
+f90appflags = -O2
+f90 = gfortran
+CXX = g++
+CLINKER = g++
+.SUFFIXES: .o .f90 .C
+
+.f90.o:
+	$(f90) $(f90appflags) -c $< -o $@
+
+.C.o: 
+	${CXX} ${CXXAPPFLAGS} -c $< ${filein} -o $@
+
+# Input files
+C++FILES = ABE.o cgh.o grid.o misc.o var.o var_list.o gsl.o operate_gsl.o\
+           bssn_class.o monitor.o surface_integral.o interpolation_cgh.o\
+	   moving_box.o
+
+F90FILES = initial_puncture.o prolongrestrict_cell.o polynomial_interpolation.o\
+	   fmisc.o bssn.o cell_diff4.o rungekutta4_bssn.o sommerfeld_bssn.o\
+           rungekutta4_lapse_shift.o sommerfeld_lapse_shift.o\
+           enforce_algebra.o alwind_4th_9.o gauge_condition_9.o\
+	   bssn_constraint.o fadmquantites_bssn.o getnp4.o kodiss.o
+
+bssn_class.o: bssn_class.h cgh.h grid.h misc.h var.h gsl.h initial_puncture.h\
+	  prolongrestrict.h bssn.h rungekutta4_bssn.h sommerfeld_bssn.h\
+          rungekutta4_lapse_shift.h sommerfeld_lapse_shift.h\
+          enforce_algebra.h alwind_9.h gauge_condition_9.h operate_gsl.h\
+	  monitor.h surface_integral.h getnp4.h moving_box.h kodiss.h
+
+cgh.o: cgh.h
+
+grid.o: grid.h
+
+misc.o: misc.h
+
+var.o: var.h
+
+var_list.o: var.h var_list.h
+
+gsl.o: gsl.h
+
+operate_gsl.o: operate_gsl.h gsl.h
+
+bssn_class.o: bssn_class.h
+
+surface_integral.o: fadmquantites_bssn.h derivatives.h interpolation_cgh.h
+
+ABE.o: bssn_class.h
+
+interpolation_cgh.o: interpolation_cgh.h
+
+moving_box.o: moving_box.h
+
+ABE: $(C++FILES) $(F90FILES)
+	$(CLINKER) $(CXXAPPFLAGS) -o $@ $(C++FILES) $(F90FILES) $(LDLIBS)

makefile_include/cpu part/makefile_nchc

@@ -0,0 +1,10 @@
+#$Id: makefile_nchc,v 1.2 2012/04/03 10:49:56 zjcao Exp $
+LDLIBS = -lxlf90 -lC -lm
+#
+CXXAPPFLAGS = -q64 -O2 -qstrict -qarch=auto -qtune=auto -qcache=auto -qlanglvl=oldmath -lxlf90 -lm -lC -Dfortran1 -Dnewc
+f90appflags = -q64 -O3 -qstrict -qarch=auto -qtune=auto -qcache=auto -qsuffix=f=f90
+f90 = mpxlf90_r
+f77 = mpxlf77_r
+CXX = mpCC_r
+CC  = mpcc_r
+CLINKER = mpCC_r

makefile_include/cpu part/makefile_ncku

@@ -0,0 +1,15 @@
+# $Id: makefile_ncku,v 1.2 2012/04/03 10:49:56 zjcao Exp $
+#used by NCKU's cluster sge 
+filein  = -I/ap/pgi/linux86-64/6.2/mpi/mpich/include
+
+LDLIBS  = -lblas -L/ap/pgi/linux86-64/6.2/mpi/mpich/lib -lmpich \
+          -L/ap/pgi/linux86-64/6.2/lib -lpgf90 -lpgf902 \
+          -lpgf90rtl -lpgf90_rpm1 -lpgftnrtl -lpghpf -lpghpf2 -lpghpf_mpi -lstdc++
+
+CXXAPPFLAGS = -O2 -Dfortran3 -Dnewc
+f90appflags = -O2 
+f90 = pgf90
+f77 = pgf77
+CXX = pgCC
+CC  = pgcc
+CLINKER = pgCC -Bstatic

makefile_include/cpu part/makefile_quad1

@@ -0,0 +1,17 @@
+# $Id: makefile_quad1,v 1.2 2012/04/03 10:49:56 zjcao Exp $
+#used by quad1
+#used for memorry leak debuging
+#~/soft/bin/valgrind --tool=memcheck --leak-check=full /home/jpyu/local/mpich127_64/bin/mpirun -np 4 -machinefile ../machines ABE >& out.log
+filein  = -I/home/jpyu/local/mpich127_64/include -I/usr/include/gsl
+
+LDLIBS  =  -L/home/jpyu/local/mpich127_64/lib -lmpich -L/opt/intel/fce/10.1.018/lib -lifcore
+
+GSLIB = -L/usr/lib64 -lgsl -lgslcblas
+
+CXXAPPFLAGS = -Dfortran3 -Dnewc -Wno-deprecated -DANSI_HEADERS -O2 -IPF-fp-strict
+f90appflags = -pc64 -O2 -IPF-fp-strict
+f90 = ifort -fpp
+f77 = ifort -fpp -fixed
+CXX = icpc
+CC  = icc -Wno-deprecated -DANSI_HEADERS -O2 -IPF-fp-strict
+CLINKER = icpc

makefile_include/cpu part/makefile_quad2

@@ -0,0 +1,13 @@
+# $Id: makefile_quad2,v 1.2 2012/04/03 10:49:56 zjcao Exp $
+#used by mydesktop
+filein  = -I/usr/include -I/home/zjcao/mpich-1.2.7p1/include
+
+LDLIBS  = -L/home/zjcao/mpich-1.2.7p1/lib -lmpich -L/usr/lib -lgfortran
+
+CXXAPPFLAGS = -O2 -Wno-deprecated -Dfortran3 -Dnewc 
+f90appflags = -O2 -x f95-cpp-input 
+f90 = gfortran
+f77 = gfortran
+CXX = g++
+CC  = gcc
+CLINKER = g++

makefile_include/cpu part/makefile_shenteng

@@ -0,0 +1,10 @@
+# $Id: makefile_shenteng,v 1.2 2012/04/03 10:49:57 zjcao Exp $
+filein  = -I/home_soft/soft/x86_64/mpi/mpich2/1.0.8p1/include
+
+LDLIBS  =  -L/home_soft/soft/x86_64/mpi/mpich2/1.0.8p1/lib -lmpich -lifcore
+
+CXXAPPFLAGS = -O2 -Wno-deprecated -Dfortran3
+f90appflags = -O2
+f90 = ifort
+CXX = icpc
+CLINKER = mpiicpc

makefile_include/cpu part/makefile_ssc

@@ -0,0 +1,12 @@
+#$Id: makefile_ssc,v 1.2 2012/04/03 10:49:57 zjcao Exp $
+filein  = -I/usr/include -I/home/compiler/mpi/mvapich/1.0/gcc.gfortran/include
+
+LDLIBS  = -L/home/compiler/mpi/mvapich/1.0/gcc.gfortran/lib -lmpich -L/usr/lib64 -lgfortran
+
+CXXAPPFLAGS = -O2 -Wno-deprecated -Dfortran3 -Dnewc 
+f90appflags = -O2 
+f90 = gfortran
+f77 = gfortran
+CXX = g++
+CC  = gcc
+CLINKER = mpiCC 

makefile_include/cpu part/makefile_valgrind

@@ -0,0 +1,15 @@
+#$Id: makefile_valgrind,v 1.1 2012/04/03 10:49:57 zjcao Exp $
+filein  = -I/usr/include -I/home/zjcao/soft/mpich/include
+
+LDLIBS  = -L/opt/intel/Compiler/11.1/064/lib/intel64 -lifcore\
+	-L/opt/intel/Compiler/11.1/064/mkl/lib/em64t\
+	-L/opt/intel/Compiler/11.1/064/mkl/lib/em64t -lmkl -lguide -lpthread\
+        -L/home/zjcao/soft/mpich/lib -lmpich -lmpichcxx -lmpl
+
+CXXAPPFLAGS = -Dfortran3 -Dnewc -Wno-deprecated -DANSI_HEADERS -g -IPF-fp-strict
+f90appflags = -pc64 -g -IPF-fp-strict
+f90 = ifort -fpp
+f77 = ifort -fpp -fixed
+CXX = icpc
+CC  = icc -Wno-deprecated -DANSI_HEADERS -O2 -IPF-fp-strict
+CLINKER = icpc

makefile_include/gpu/makefile.inc.duzh

@@ -0,0 +1,31 @@
+# $Id: makefile_cao,v 1.2 2012/04/03 10:49:56 zjcao Exp $
+#used by mydesktop
+#modified by duzh, Feb.3,2013
+
+#filein define all the directories should be included for head files
+filein  = $(filein_old) $(filein_mpi) $(filein_cuda)
+filein_old = -I/usr/include  
+filein_mpi= -I/usr/local/mpi-gcc/include 
+filein_cuda= -I/usr/local/cuda/cuda-4.0/include
+filein_cuda_sdk= -I/usr/local/cuda/sdk-4.0/CUDALibraries/common/inc 
+
+
+#LDLIB defines all the libs should be included
+LDLIBS  = $(LDLIB_CUDA)  $(LDLAB_MPI) $(LDLIB_FORTRAN)
+LDLIB_CUDA= -L/usr/local/cuda/cuda-4.0/lib64 -lcudart 
+LDLIB_MPI=  -L/usr/local/mpi-gcc/lib -lmpich 
+LDLIB_FORTRAN= -L/vol-th/software/gcc-4.6.1/lib64 -lgfortran 
+
+#CXXAPPFLAGS defines all the flages for c plus compiler
+#CXXAPPFLAGS = -O2 -Wno-deprecated -Dfortran3 -Dnewc -fopenmp
+CXXAPPFLAGS = -O2 -Wno-deprecated -Dfortran3 -Dnewc 
+#f90appflags = -O2 -fopenmp
+f90appflags = -O2 -x f95-cpp-input 
+f90 = gfortran
+CXX = mpicxx
+CLINKER = mpicxx
+
+#CUDA compile configure
+Cu = nvcc
+CUDA_LIB_PATH = -L/usr/local/cuda/cuda-4.0/lib64 -I/usr/local/cuda/sdk-4.0/CUDALibraries/common/inc
+CUDA_APP_FLAGS = -O2 --ptxas-options=-v -arch compute_20 -code compute_20,sm_20

makefile_include/gpu/makefile.inc.tianhe

@@ -0,0 +1,31 @@
+# $Id: makefile_cao,v 1.2 2012/04/03 10:49:56 zjcao Exp $
+#used by mydesktop
+#modified by duzh, Feb.3,2013
+
+#filein define all the directories should be included for head files
+filein  = $(filein_old) $(filein_mpi) $(filein_cuda)
+filein_old = -I/usr/include  
+filein_mpi= -I/usr/local/mpi-gcc/include 
+filein_cuda= -I/usr/local/cuda/cuda-4.0/include
+filein_cuda_sdk= -I/usr/local/cuda/sdk-4.0/CUDALibraries/common/inc 
+
+
+#LDLIB defines all the libs should be included
+LDLIBS  = $(LDLIB_CUDA)  $(LDLAB_MPI) $(LDLIB_FORTRAN)
+LDLIB_CUDA= -L/usr/local/cuda/cuda-4.0/lib64 -lcudart 
+LDLIB_MPI=  -L/usr/local/mpi-gcc/lib -lmpich 
+LDLIB_FORTRAN= -L/vol-th/software/gcc-4.6.1/lib64 -lgfortran 
+
+#CXXAPPFLAGS defines all the flages for c plus compiler
+#CXXAPPFLAGS = -O2 -Wno-deprecated -Dfortran3 -Dnewc -fopenmp
+CXXAPPFLAGS = -O2 -Wno-deprecated -Dfortran3 -Dnewc 
+#f90appflags = -O2 -fopenmp
+f90appflags = -O2 -x f95-cpp-input 
+f90 = gfortran
+CXX = mpicxx
+CLINKER = mpicxx
+
+#CUDA compile configure
+Cu = nvcc
+CUDA_LIB_PATH = -L/usr/local/cuda/cuda-4.0/lib64 -I/usr/local/cuda/sdk-4.0/CUDALibraries/common/inc
+CUDA_APP_FLAGS = -O2 --ptxas-options=-v -arch compute_20 -code compute_20,sm_20

makefile_include/gpu/makefile_alps

@@ -0,0 +1,17 @@
+# $Id: makefile_alps,v 1.1 2012/11/08 11:54:00 zjcao Exp $
+
+#for ALPS PGI/openmpi
+
+
+
+filein  =
+
+LDLIBS  = -lpgf90 -lpgf902 -lpgf90rtl -lpgf90_rpm1 -lpgftnrtl -lpghpf -lpghpf2 -lpghpf_mpi
+
+# you can also replace the above long list with just "-lpgf90libs"
+
+
+
+
+
+CXXAPPFLAGS = -O2 -Dfortran3 -Dnewc

makefile_include/gpu/makefile_altix

@@ -0,0 +1,13 @@
+# $Id: makefile_altix,v 1.2 2012/04/03 10:49:56 zjcao Exp $
+
+#used by altix.sccas.cn
+
+filein  = -I/usr/include
+
+
+
+LDLIBS  =  -L/usr/lib -L/opt/intel/fc/10.1.008/lib -lmpi -lifcore -limf -lintrins
+
+
+
+CXXAPPFLAGS = -O2 -Wno-deprecated -Dfortran3

makefile_include/gpu/makefile_bnu

@@ -0,0 +1,15 @@
+#$Id: makefile_bnu,v 1.2 2012/04/03 10:49:56 zjcao Exp $
+
+# bnu has two compiler systems
+
+# one is altix330
+
+# one is chess which is used here
+
+filein  = -I/usr/chess/mpich-gm-gcc34-1.2.6..14b/include 
+
+
+
+LDLIBS  = -L/opt/intel/fce/9.0/lib -lifcore -L/usr/chess/mpich-gm-gcc34-1.2.6..14b/lib64 -lmpich 
+
+

makefile_include/gpu/makefile_cao

@@ -0,0 +1,62 @@
+# $Id: makefile_cao,v 1.2 2012/04/03 10:49:56 zjcao Exp $
+
+#used by mydesktop
+
+filein  = -I/home/zjcao/local/include
+
+
+
+LDLIBS  =  -L/home/zjcao/local/lib -lmpich -L/usr/lib -lgfortran 
+
+
+
+CXXAPPFLAGS = -O2 -Wno-deprecated -Dfortran3 -Dnewc
+
+f90appflags = -O2
+
+f90 = gfortran
+
+CXX = g++
+
+CLINKER = g++
+
+.SUFFIXES: .o .f90 .C
+
+
+
+.f90.o:
+
+	$(f90) $(f90appflags) -c $< -o $@
+
+
+
+.C.o:
+
+	${CXX} ${CXXAPPFLAGS} -c $< ${filein} -o $@
+
+
+
+# Input files
+
+C++FILES = ABE.o cgh.o grid.o misc.o var.o var_list.o gsl.o operate_gsl.o\
+
+           bssn_class.o monitor.o surface_integral.o interpolation_cgh.o\
+
+	   moving_box.o
+
+
+
+F90FILES = initial_puncture.o prolongrestrict_cell.o polynomial_interpolation.o\
+
+	   fmisc.o bssn.o cell_diff4.o rungekutta4_bssn.o sommerfeld_bssn.o\
+
+           rungekutta4_lapse_shift.o sommerfeld_lapse_shift.o\
+
+           enforce_algebra.o alwind_4th_9.o gauge_condition_9.o\
+
+	   bssn_constraint.o fadmquantites_bssn.o getnp4.o kodiss.o
+
+
+
+bssn_class.o: bssn_class.h cgh.h grid.h misc.h var.h gsl.h initial_puncture.h\
+

makefile_include/gpu/makefile_ibm1350

@@ -0,0 +1,12 @@
+#$Id: makefile_ibm1350,v 1.2 2012/04/03 10:49:56 zjcao Exp $
+
+filein = -I/opt/vltmpi/OPENIB/mpi.pgcc.rsh/include -I/opt/pgi/linux86-64/6.2/include
+
+
+
+LDLIBS = -L/opt/vltmpi/OPENIB/mpi.pgcc.rsh/lib -lmpich -L/usr/local/ofed/lib64 -libverbs -L/opt/pgi/linux86-64/6.2/lib -lpgf90 -lpgf902 -lpgf90rtl -lpgf90_rpm1 -lpgftnrtl -lpghpf -lpghpf2 -lpghpf_mpi -lstdc++
+
+
+
+CXXAPPFLAGS = -O2 -fast --no_warnings -DUNDERSCORE -DWant_c_files -DANSI_HEADERS -Dfortran3 -Dnewc
+

makefile_include/gpu/makefile_icm

@@ -0,0 +1,14 @@
+#$Id: makefile_icm,v 1.2 2012/04/03 10:49:56 zjcao Exp $
+
+filein  =  
+
+
+
+LDLIBS  = -L/opt/intel/Compiler/11.1/064/lib/intel64 -lifcore\
+
+	-L/opt/intel/Compiler/11.1/064/mkl/lib/em64t\
+
+	-L/opt/intel/Compiler/11.1/064/mkl/lib/em64t -lmkl -lguide -lpthread 
+
+
+

makefile_include/gpu/makefile_itp

@@ -0,0 +1,12 @@
+#$Id: makefile_itp,v 1.1 2013/01/26 11:23:09 zjcao Exp $
+
+filein  =  
+
+
+
+LDLIBS  = -lifcore
+
+
+
+CXXAPPFLAGS = -O2 -Wno-deprecated -Dfortran3 -Dnewc
+

makefile_include/gpu/makefile_jtao

@@ -0,0 +1,10 @@
+filein  =
+
+CXXAPPFLAGS = -O2 -Wno-deprecated -Dfortran3 -Dnewc
+f90appflags = -O2 -cpp -ffree-line-length-256
+LDLIBS  =  -lgfortran
+f90 = mpif90
+f77 = mpif77
+CXX = mpicxx
+CC  = mpicc
+CLINKER = mpicxx

makefile_include/gpu/makefile_makoto

@@ -0,0 +1,62 @@
+# $Id: makefile_makoto,v 1.2 2012/04/03 10:49:56 zjcao Exp $
+
+#used by makoto
+
+filein  = -I/opt/mpich127_gnu/include
+
+
+
+LDLIBS  =  -L/opt/mpich127_gnu/lib -lmpich -lgfortran 
+
+
+
+CXXAPPFLAGS = -O2 -Wno-deprecated -Dfortran3 -Dnewc
+
+f90appflags = -O2
+
+f90 = gfortran
+
+CXX = g++
+
+CLINKER = g++
+
+.SUFFIXES: .o .f90 .C
+
+
+
+.f90.o:
+
+	$(f90) $(f90appflags) -c $< -o $@
+
+
+
+.C.o: 
+
+	${CXX} ${CXXAPPFLAGS} -c $< ${filein} -o $@
+
+
+
+# Input files
+
+C++FILES = ABE.o cgh.o grid.o misc.o var.o var_list.o gsl.o operate_gsl.o\
+
+           bssn_class.o monitor.o surface_integral.o interpolation_cgh.o\
+
+	   moving_box.o
+
+
+
+F90FILES = initial_puncture.o prolongrestrict_cell.o polynomial_interpolation.o\
+
+	   fmisc.o bssn.o cell_diff4.o rungekutta4_bssn.o sommerfeld_bssn.o\
+
+           rungekutta4_lapse_shift.o sommerfeld_lapse_shift.o\
+
+           enforce_algebra.o alwind_4th_9.o gauge_condition_9.o\
+
+	   bssn_constraint.o fadmquantites_bssn.o getnp4.o kodiss.o
+
+
+
+bssn_class.o: bssn_class.h cgh.h grid.h misc.h var.h gsl.h initial_puncture.h\
+

makefile_include/gpu/makefile_nchc

@@ -0,0 +1,10 @@
+#$Id: makefile_nchc,v 1.2 2012/04/03 10:49:56 zjcao Exp $
+
+LDLIBS = -lxlf90 -lC -lm
+
+#
+
+CXXAPPFLAGS = -q64 -O2 -qstrict -qarch=auto -qtune=auto -qcache=auto -qlanglvl=oldmath -lxlf90 -lm -lC -Dfortran1 -Dnewc
+
+f90appflags = -q64 -O3 -qstrict -qarch=auto -qtune=auto -qcache=auto -qsuffix=f=f90
+

makefile_include/gpu/makefile_ncku

@@ -0,0 +1,15 @@
+# $Id: makefile_ncku,v 1.2 2012/04/03 10:49:56 zjcao Exp $
+
+#used by NCKU's cluster sge 
+
+filein  = -I/ap/pgi/linux86-64/6.2/mpi/mpich/include
+
+
+
+LDLIBS  = -lblas -L/ap/pgi/linux86-64/6.2/mpi/mpich/lib -lmpich \
+
+          -L/ap/pgi/linux86-64/6.2/lib -lpgf90 -lpgf902 \
+
+          -lpgf90rtl -lpgf90_rpm1 -lpgftnrtl -lpghpf -lpghpf2 -lpghpf_mpi -lstdc++
+
+

makefile_include/gpu/makefile_quad1

@@ -0,0 +1,15 @@
+# $Id: makefile_quad1,v 1.2 2012/04/03 10:49:56 zjcao Exp $
+
+#used by quad1
+
+#used for memorry leak debuging
+
+#~/soft/bin/valgrind --tool=memcheck --leak-check=full /home/jpyu/local/mpich127_64/bin/mpirun -np 4 -machinefile ../machines ABE >& out.log
+
+filein  = -I/home/jpyu/local/mpich127_64/include
+
+
+
+LDLIBS  =  -L/home/jpyu/local/mpich127_64/lib -lmpich -L/opt/intel/fce/10.1.018/lib -lifcore
+
+

makefile_include/gpu/makefile_quad2

@@ -0,0 +1,13 @@
+# $Id: makefile_quad2,v 1.2 2012/04/03 10:49:56 zjcao Exp $
+
+#used by mydesktop
+
+filein  = -I/usr/include -I/home/zjcao/mpich-1.2.7p1/include
+
+
+
+LDLIBS  = -L/home/zjcao/mpich-1.2.7p1/lib -lmpich -L/usr/lib -lgfortran
+
+
+
+CXXAPPFLAGS = -O2 -Wno-deprecated -Dfortran3 -Dnewc 

makefile_include/gpu/makefile_shenteng

@@ -0,0 +1,10 @@
+# $Id: makefile_shenteng,v 1.2 2012/04/03 10:49:57 zjcao Exp $
+
+filein  = -I/home_soft/soft/x86_64/mpi/mpich2/1.0.8p1/include
+
+
+
+LDLIBS  =  -L/home_soft/soft/x86_64/mpi/mpich2/1.0.8p1/lib -lmpich -lifcore
+
+
+

makefile_include/gpu/makefile_ssc

@@ -0,0 +1,12 @@
+#$Id: makefile_ssc,v 1.2 2012/04/03 10:49:57 zjcao Exp $
+
+filein  = -I/usr/include -I/home/compiler/mpi/mvapich/1.0/gcc.gfortran/include
+
+
+
+LDLIBS  = -L/home/compiler/mpi/mvapich/1.0/gcc.gfortran/lib -lmpich -L/usr/lib64 -lgfortran
+
+
+
+CXXAPPFLAGS = -O2 -Wno-deprecated -Dfortran3 -Dnewc 
+

makefile_include/gpu/makefile_valgrind

@@ -0,0 +1,15 @@
+#$Id: makefile_valgrind,v 1.1 2012/04/03 10:49:57 zjcao Exp $
+
+filein  = -I/usr/include -I/home/zjcao/soft/mpich/include
+
+
+
+LDLIBS  = -L/opt/intel/Compiler/11.1/064/lib/intel64 -lifcore\
+
+	-L/opt/intel/Compiler/11.1/064/mkl/lib/em64t\
+
+	-L/opt/intel/Compiler/11.1/064/mkl/lib/em64t -lmkl -lguide -lpthread\
+
+        -L/home/zjcao/soft/mpich/lib -lmpich -lmpichcxx -lmpl
+
+

makefile_include/gpu/note_step.txt

@@ -0,0 +1,12 @@
+#if (PSTR == 0) 1604
+	#if 1		1605
+		step 1606
+	#else 		2358
+		step 2360
+	#endif		3035
+#elif (PSTR == 1)	3036
+	step{ 3037
+	{
+	}		3471
+	
+	void bssn_class::SHStep()